Cucsat.G3564.T32 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GAAACGGGAAGTGGTTGGTGGAGAGCAAAGAAAGTGAAAAGAGAAAGGTTTGTGCCAAATGCTCAGCAATCTTCTTCTCCATTCCATTGTTCCCACCCCTTCTTCCGAACTCAATCCATTTCTCAAATGCCGAAACTCCTCTCCCCTCTTCCTCGTCTCCACAAGGCACGAACGCGTTCGTTGCTTGGCCAAGAAGAAGATCGGATTCATGGATCAAATTCTTGACTACATTGAAGGTGCAGACAGGAAAATCTCCTGTTTCATCAGTTTGTTAATTTTATCATCTTACTTCTTTCTAACTTACTCTTACTGTTGGTTGTGTTGTTTGATTTTAGGCGGTCCCAAGTTAAGGAAATGGTACGGGGCGCCTGACCTTGTTTCTAAAGATGAATCTGCTCTTAAAGACGAGGATGGATTTTCCGGTAATGTGTGTTGAACTAATTATTATTATTATTACTATCATCAGTTTGGGATTGAGTTTGTTTCTTTAGTACAGAGGAAGGTACGATCAGGGATGCAGTTTTGGTGACTGATGGGGATACTGAGATTGGTCAGGTGTGTTTTCTTTTGCGTTTTTTCACTGAAGATTTTGTAAAGAAATTATGACGAGCATTGAACTCTATTCGTATGGAATTGAAGATATAAACATTATGATTTATGTAAGCAACTGCTTGGAAGAAGCTGTTATGGATCCAACACCAGAACAGTTAAATATCTCACTCTATTTAAGGCTAGACAAGTTACTCTTCTCATTAACAATTGACTTTTAGATAAAACTCTGTATCATCTAATAGTTGCGTCTTCAAGCCACGAGGTGTGATATGTGATCAACTACTGTAATACCTACCTTATGCAGATGGTGATATTATCGTTGATTGTGAAAAAAGCCAGAGTGAAGGCGTTGGTGAAGGATAAGAAGGCTGCCCTTGAAGCTTTTGGATTATATGTTGAGGTGGGTTGGATTCAGATTAGAGGAACGTTGCTTGTAGAATGTATTTAATATGCTATATTTGCTGTTAATCCCATCTCTTCTGCGTTTTTTTTCCTTCCCCATCTCAAATGAACTATTGGTTTTTTTTTTTTTTTGAATTCATGTGCAAAGCCAGTAGCCGGTGACATCAGAGATGGGCCATCATTGAAGAAAGCTCTTAGAGAAGTCCGCACTATAATATGCCCAAAAGTATGGATAATCAATTTCAATGTATTATTATTGTCCCCTAAATTTTCCCTCTAGCTTTTATTTGAAAATGCTCGAGGCAACATGATTTATCATTTTTTAATGTTCCCATCAACTATAATGCACATTTAGGTTTCTTACTCCATGGCATTTAATCTTACTTTTCTTGAGATAATATTTAAGAAGGAACAAGTGGCATGGATATAGAAATCGACTCGGTGATGAACATGGACATAAGATGCAGAACGTGTGGATGAAAATATCAACCATGTCGTAGAGGTTCCATTATAAATATGTTAAAGATAAGCATTCCCATGTGATGGGCAGTTTTAACTGCTACAAATTCTGGTTCATCTTACGGTTCTGGATAAATTCCTTCATGGGTTTTCCACTATCAGGATAATTAACGATATGGATATAACTATATAAGCTTACATTTAATCTCAGGTTAGAAGCATGAGCATGCATTTGAATTCCTTAAGCTCAAACTTTCACGCAGATACATTGAGCCTTATTGAAGGGATGTATGATGGTTATTGACTCATGAGGTTTGTTAATAATCATATCACCAGGAAGGATTCTTATCCAGTGCTGCAAGCCTGAAAGGGGTGCAACATATAGTTCTCTTATCCCAGGTATACATCCAGTTCCCTGTCCTTCCCCCGTCTCTTTGGCATACACAAATATGTCGACAATAAATACTGTGTTGGTATGGACATGGCAAGAACCGATCCTTCAATCTATATTCATTGTCTAGACTTAATAAGGTTGCAGTTATCCAATTATAGAAGTGCTAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCAAAAAAAATGGCTGAGCAAGATGAAGCAGTTCTAGTGGCATCAGGAATTCCTTATACCATCATACAAGCTGGCTCCTTGCTAGATACGCCTGGTGGGAATCAAGGATTCAGCTTTGAAGAGGTTATTCTTCTGTCTTAAATGCTTCTTTATTAACAGCTATCTGATATAGTCAATAACCGATCCAAATACGGCTGATTTATTTATTATCTTTTGAGGGAGTGTATGGAGCTTCATTTGCGATGCCTTGTTAATTTTTGCATATAATGATATAATGAATCGTTGTATTGCGTTTTTGGTGTTATTCTTCAGGGTTGTGCAACTGCGGGAACTCTCAGCAAAGAGGATGCCGCCTTCATTTGTGTAGAAGCTACTGATGTGATTCCTAAAGGAGGGTTTGCATTTGAGGTTGGCAAAGTTAATCTTTATGTCCAACGCCTATGATTGTTTTTGATAAATTTCATCACTTGAAAATCTGAGGCAAAGGTATCCATTACCTGTGAGATGGGATTTAAGGGTAAATTTGCTAGGACTTTTACAATGATGAGAAGTATTTTGAGTTTTCCAAGAGCACTTTTCAAAGTCCTTATAGGTTAAAACTTAAGGGTCACTAACCAAAGTAAATAGTTATTGGACTGAATGAATGAGTTCAAACCATATTGGTTATCTATCTAAGATGTAATATTTTGTATTAGTTCATTTAGAACCAAATTAGATATAATATTTTGTATTAGTTCATTTAGAACCAAATGTAGTAGAGTTAAGTTGCGAGATAGTCTAGGAATGCTTACATATATACCAACAAAGAAAACTATACCCCTTGGGATTACAAAAAAGATGTTATTAAAAATTTCTAAAGCTATTTAAAAAAATAAGTCAAAGAATGCAAAACGAATAGTGTTTTCTTCAAAAGTCATTCCAAACTCACTTAGATTGAAATAGAATCACAAATCTAAACATTTCAAATAGCTTCCTCTATGCTATATTTGATGGAGTATTTTGTAATTTCAAATTTTGTGTTCCATGTATGTTACAACAGGTAGCCAATGGAAATGAACAAGTTTCAGATTGGAAAGTGTGGTTGACAAGATTACTAGAGAAAACAGAGCAGCTTCAATGACCACATGCTTAAGATGTATGAATATACCTTCTATCACCTGCTATTGTCCGATCTTGATATTTCCATTCTTTACATTTGTGATTTAGCTTAAGAAATAGCTTTTTTCTTTTGCAAGCAAAAATTCCATTAATTCATCAGCTGCCAAAACCCTTGCTTCCCCTTGGTCCGGGATAAACTAGATGTTACGTAATAAAGTTAAATGACTTAGTTGTTACAAATTTGGAAGTGAACTTTTTTTTTTTGGGAGAAAATCAATCCATGTCCTCAAATAATTGAAAATTGATAATTGTATCAACAAAAAAACTAAAAATATTAGCGGTAGATTTA ATGCTCAGCAATCTTCTTCTCCATTCCATTGTTCCCACCCCTTCTTCCGAACTCAATCCATTTCTCAAATGCCGAAACTCCTCTCCCCTCTTCCTCGTCTCCACAAGGCACGAACGCGTTCGTTGCTTGGCCAAGAAGAAGATCGGATTCATGGATCAAATTCTTGACTACATTGAAGGCGGTCCCAAGTTAAGGAAATGGTACGGGGCGCCTGACCTTGTTTCTAAAGATGAATCTGCTCTTAAAGACGAGGATGGATTTTCCGTACAGAGGAAGGTACGATCAGGGATGCAGTTTTGGTGA MLSNLLLHSIVPTPSSELNPFLKCRNSSPLFLVSTRHERVRCLAKKKIGFMDQILDYIEGGPKLRKWYGAPDLVSKDESALKDEDGFSVQRKVRSGMQFW Homology
BLAST of Cucsat.G3564.T32 vs. NCBI nr
Match: XP_011659627.1 (uncharacterized protein At5g02240 [Cucumis sativus] >KGN45495.1 hypothetical protein Csa_016471 [Cucumis sativus]) HSP 1 Score: 183 bits (465), Expect = 2.64e-55 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. NCBI nr
Match: KAA0059404.1 (uncharacterized protein E6C27_scaffold242G001300 [Cucumis melo var. makuwa] >TYK03923.1 uncharacterized protein E5676_scaffold347G001200 [Cucumis melo var. makuwa]) HSP 1 Score: 163 bits (412), Expect = 2.57e-47 Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. NCBI nr
Match: XP_008462315.1 (PREDICTED: uncharacterized protein At2g37660, chloroplastic [Cucumis melo]) HSP 1 Score: 161 bits (408), Expect = 1.03e-46 Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. NCBI nr
Match: XP_038896430.1 (uncharacterized protein LOC120084693 isoform X4 [Benincasa hispida]) HSP 1 Score: 157 bits (397), Expect = 1.33e-45 Identity = 77/97 (79.38%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. NCBI nr
Match: XP_038896429.1 (uncharacterized protein LOC120084693 isoform X3 [Benincasa hispida]) HSP 1 Score: 157 bits (397), Expect = 2.35e-45 Identity = 77/97 (79.38%), Postives = 83/97 (85.57%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. ExPASy TrEMBL
Match: A0A0A0K736 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450540 PE=4 SV=1) HSP 1 Score: 183 bits (465), Expect = 1.28e-55 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. ExPASy TrEMBL
Match: A0A5A7UWE4 (NAD(P)-bd_dom domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001200 PE=4 SV=1) HSP 1 Score: 163 bits (412), Expect = 1.24e-47 Identity = 79/97 (81.44%), Postives = 87/97 (89.69%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. ExPASy TrEMBL
Match: A0A1S3CGP5 (uncharacterized protein At2g37660, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500698 PE=4 SV=1) HSP 1 Score: 161 bits (408), Expect = 4.97e-47 Identity = 78/97 (80.41%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. ExPASy TrEMBL
Match: A0A6J1KE28 (uncharacterized protein At2g37660, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494837 PE=4 SV=1) HSP 1 Score: 139 bits (349), Expect = 3.36e-38 Identity = 64/90 (71.11%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. ExPASy TrEMBL
Match: A0A6J1D3X2 (uncharacterized protein At5g02240 OS=Momordica charantia OX=3673 GN=LOC111017032 PE=4 SV=1) HSP 1 Score: 139 bits (349), Expect = 3.52e-38 Identity = 67/97 (69.07%), Postives = 77/97 (79.38%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. TAIR 10
Match: AT1G72640.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-16 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 0
BLAST of Cucsat.G3564.T32 vs. TAIR 10
Match: AT1G72640.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 81.6 bits (200), Expect = 3.8e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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