Cucsat.G3536.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3536.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	60S ribosomal protein L7
Location	ctg1047: 458572 .. 461001 (-)
RNA-Seq Expression	Cucsat.G3536.T5
Synteny	Cucsat.G3536.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCCTACAAAACCCTACCTTTCATTTGATCGCCTTCTTCCCTTTTCCATGCTCAGGAAACCCTAATTCTGCTTCAATAATCAGTATCACAACAGCAACAAAGGGTGAGTAGCATTAATACAGGCAATCTTTCTTCTTGATTTAAACACTGGCATCAGATTTATCGAAATCGACGGTATTTGATTTTTGTTTTTTGTTTTCCCAAGCAGTAAGGTACTTAGTTGATGTGTATGATCTTATATTCTGAAAAGATTTTCACATTGTTTTATCTCACAATTTTATTGAGAGAATGTTCTGGCAAATGTATAGTTCTGCATTCATTAATGGAAGAATATCGATTCACTAATAAGCACCACTGACATGGCGTCGAGTGCTATTCCTGTTCTACTTAGTTGTCTACATCTACGTGTTAGACGATAGATATATATATTTTATTCACCGATTTTTGTTTTATGACGTCTAGGATTTTGGGATTTTCATGCCATTTCAATTTATCATTGTCCCTAAATTGTAATAATTCAACGAATTTGGTGCATTGCCACTCCCCATTTTTCTACTGTTGCGAAATTATTATTTGATCACGAATCAAGAAATCTTCTGCGTTTCCAATGTTGGCTATTACGTATATACGATGCCTTTTTCATTTGAATTTAAGGAATATACCATATGCCCAGTTTCTCCATTTGTATATTGTGGGGTTGCGTCTCTTCTTCCAAGTGTAAATGTAGAATTTCCATGAATATATCTTGTGCTATTAATCGGTCAGTTATGTTGACTTCGGGGTATTATTACTAGTCCCCTGTTAACAGAGTGTGTTTAATCATTTTTAATTATCTCTTTCAGCACAAAGATGGGTGAAGAAGCAAAGGCCATAGTTCCAGAGTCGGTCTTGAAAAAAGCAAAGAGAAATGAAGAGTGGTCTTTGGCCAGTAAGCAAGAACTTGAGGCAGCAAAGAAGAAGAGAGCCGAGACCAGGAAATTGATTTACAACCGTGCTAAATTGTACTCAAAGGAATATGAGGAGCAGGTACTGATCACTTTTCCAACTGACAGTCTCTCCTCTGATTAACGATCCAGTTATGGAGAGATATAAATCATTGTTTGTGGTATCAGGAAAAAGAGCTTGTTAGGCTGAAGCGTGAAGCGAGGTTGAAGGGAGGATTTTATGTTGACCCGGAGGCAAAGCTTTTGTTCATTGTTCGTATTCGTGGGTATGTTTAATCCTGTACACGTCTATGGAATTGTTTTTGTTGGATACTCACTTGATTTTCTATTCTTTAATCTGTCAATTTAAACTTTCAGTATCAATGCCATTGACCCTAAGACGAGAAAGATATTGCAGCTTTTGAGACTGAGACAGGTAGTGTTTTAGTAAGATTGCTTCAGCGCACATGCAGCATCATATTTGATGTTTGATGATTATTCTCGTAGATGTTTTTGCTTGATGTGTTTAATATGTTTAGAGACGATATTTTTTCATCCCTGAATTGGAGTTACATGCTACTCTCTCGTTGATCTGGCACAGATATTCAATGGTGTATTTCTGAAAGTCAACAAAGCAACACTGAATATGCTTCACAGGGTTGAACCTTATGTGACTTATGGGTACTTTTCTTAACAAGTCAATTCTTTTAACTCACACAAAAGTTGGTATTTTGCATCTGAAAATGAAACTATCATATTCCATTCTATTGTTAGTTATCCCAATCTCAAGAGTGTGAAAGAACTCATCTACAAGAGAGGCTTTGGGAAACTAAACAAGCAGAGAACTGCTTTGACCGACAACTCAATCGTCGAACAGGTTTGCATTGTTTCATCCATTGTTTAATTCATATCCTACATTCAGAAACTCCTCGTATGCTTAGACTGCTCCATTGTCTCATAAGGCCCTAGGTAAACATGGAATTTTGAGCGTTGAAGATCTTATTCACGAGATCATGACAGTTGGACCTCATTTTAAAGAGGCAAACAACTTCCTGTGGCCTTTCAAGCTCAAGGCGCCATTGGGTGGTTTGAAAAAGAAGAGGAACCACTATGTTGAAGGAGGAGATGCTGGAAACCGTGAAAATTACATCAATGAGCTTATCAGAAGAATGAACTAGTTTCTCTGATTTTTTTTTTTTTTGCTATGAAGGGTGAAAGTAGAGGCTTCTAATTCTGTCCTTATTTGATGGGATAATTTGAAGTGAAATTTCCTTGGTCTCATATCATCTGAACTCTTCTATACTTGATCATCATCAAGCTTATCATTGTTTGTTAGTTGTTTGGAGGACGTGGATCAATTTCTTGAAAATTTTGTTTCCTTTGTTAAATTTTTAAAAAGATGTCGATGGGGGATTTCTTGAATTAGACTAATTCCATTATTTATACGCTTGGTTGTAATCTCTGTCCCCTTTTCTCATTATTAGTTAGTATTTCTGTCTACTTTGT

Coding sequence (CDS)

ATGGGTGAAGAAGCAAAGGCCATAGTTCCAGAGTCGGTCTTGAAAAAAGCAAAGAGAAATGAAGAGTGGTCTTTGGCCAGTAAGCAAGAACTTGAGGCAGCAAAGAAGAAGAGAGCCGAGACCAGGAAATTGATTTACAACCGTGCTAAATTGTACTCAAAGGAATATGAGGAGCAGGAAAAAGAGCTTGTTAGGCTGAAGCGTGAAGCGAGGTTGAAGGGAGGATTTTATGTTGACCCGGAGGCAAAGCTTTTGTTCATTGTTCGTATTCGTGGTATCAATGCCATTGACCCTAAGACGAGAAAGATATTGCAGCTTTTGAGACTGAGACAGATATTCAATGGTGTATTTCTGAAAGTCAACAAAGCAACACTGAATATGCTTCACAGGGTTGAACCTTATGTGACTTATGGTTATCCCAATCTCAAGAGTGTGAAAGAACTCATCTACAAGAGAGGCTTTGGGAAACTAAACAAGCAGAGAACTGCTTTGACCGACAACTCAATCGTCGAACAGGTTTGCATTGTTTCATCCATTGTTTAA

Protein sequence

MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQVCIVSSIV

Homology

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot
Match: Q9LHP1 (60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.7e-75
Identity = 145/169 (85.80%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+LA KQELEAAKK+ AE RKLI+NRAK YSKEY+E+E+EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           ++LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN QRTALTDNSIV+Q
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot
Match: P60040 (60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 5.1e-72
Identity = 140/169 (82.84%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+L  KQ +EAAKKK AE RKLI+ RA+ YSKEY E+EKEL
Sbjct: 3   ESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKEL 62

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           + LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 63  ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN QR ALTDNSIVEQ
Sbjct: 123 TMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQ 171

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot
Match: P60039 (60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.1e-70
Identity = 137/169 (81.07%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+LA K E  AAKKK  E RKLI+ RA+ Y+KEY E++ EL
Sbjct: 3   ESKVVVPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKDNEL 62

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           +RLKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 63  IRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYGYPNLKSVKELIYKRG+GKLN QR ALTDNSIV+Q
Sbjct: 123 TVNMLRRVEPYVTYGYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQ 171

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot
Match: Q7SBD5 (60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rpl-7 PE=3 SV=2)

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-45
Identity = 96/165 (58.18%), Postives = 124/165 (75.15%), Query Frame = 0


Query: 8   IVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKELVRLK 67
           +VPE++LKK K  E+     + E+E  K    E R +I+ RA+ Y KEY + E+E +RL+
Sbjct: 12  LVPETLLKKRKSQEKARAERQAEIEKKKAANKEKRAVIFKRAETYVKEYRDVEREKIRLQ 71

Query: 68  REARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKATLNM 127
           R A+  G F++  EAKL+F++RI+GIN I PK RKILQLLRL QI NGVF++V KAT  M
Sbjct: 72  RAAKQDGSFHIPAEAKLIFLIRIKGINKIPPKPRKILQLLRLLQINNGVFVRVTKATAEM 131

Query: 128 LHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           +  VEP+V YGYPNLKSVKELIYKRG+GK+NKQR ALTDNSI+E+
Sbjct: 132 IKIVEPWVAYGYPNLKSVKELIYKRGYGKVNKQRVALTDNSIIEE 176

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot
Match: Q5ZJ56 (60S ribosomal protein L7 OS=Gallus gallus OX=9031 GN=RPL7 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.0e-44
Identity = 95/172 (55.23%), Postives = 124/172 (72.09%), Query Frame = 0


Query: 3   EEAKAI--VPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 62
           +EAK +  VPES+LK+ +          + L A KK R   RK+IY RAK Y KEY    
Sbjct: 4   KEAKKVPSVPESLLKRRQAYAAAKAKRLKRLLAQKKFRKAQRKIIYERAKAYHKEYRHMY 63

Query: 63  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 122
           ++ +R+ R AR  G +YV  E KL F++RIRGIN + PK RK+LQLLRLRQIFNG F+K+
Sbjct: 64  RQEIRMARMARKAGNYYVPAEPKLAFVIRIRGINGVSPKVRKVLQLLRLRQIFNGTFVKL 123

Query: 123 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           NKA++NML  VEPY+ +GYPNLKSV +LIYKRG+GK+NK+R ALTDNS++ +
Sbjct: 124 NKASINMLRIVEPYIAWGYPNLKSVHDLIYKRGYGKINKKRIALTDNSLIRK 175

[Close]

BLAST of Cucsat.G3536.T5 vs. NCBI nr
Match: XP_011659589.1 (60S ribosomal protein L7-4 [Cucumis sativus] >KGN45421.1 hypothetical protein Csa_016571 [Cucumis sativus])

HSP 1 Score: 323 bits (827), Expect = 1.12e-109
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. NCBI nr
Match: KAA0059342.1 (60S ribosomal protein L7-4 [Cucumis melo var. makuwa])

HSP 1 Score: 321 bits (822), Expect = 6.47e-109
Identity = 169/172 (98.26%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MG+EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGQEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREARLKGGFYVDPEAKLLFI+RIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. NCBI nr
Match: XP_008462217.1 (PREDICTED: 60S ribosomal protein L7-4 [Cucumis melo])

HSP 1 Score: 318 bits (816), Expect = 5.30e-108
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MG+EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAK YSKEYEEQE
Sbjct: 1   MGQEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKSYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREARLKGGFYVDPEAKLLFI+RIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. NCBI nr
Match: XP_038899684.1 (60S ribosomal protein L7-4 [Benincasa hispida] >XP_038899685.1 60S ribosomal protein L7-4 [Benincasa hispida] >XP_038899687.1 60S ribosomal protein L7-4 [Benincasa hispida] >XP_038899688.1 60S ribosomal protein L7-4 [Benincasa hispida])

HSP 1 Score: 314 bits (804), Expect = 3.56e-106
Identity = 165/173 (95.38%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKR+ETRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRSETRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREA+LKGGFYVDPEAKLLFI+RIRGINA+ PKT+ ILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTKTILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQV 173
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQV
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQV 173

[Close]

BLAST of Cucsat.G3536.T5 vs. NCBI nr
Match: XP_022153699.1 (60S ribosomal protein L7-4-like [Momordica charantia])

HSP 1 Score: 302 bits (773), Expect = 1.86e-101
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEEAKAI+PESVLKK +RNEEW+ ASKQE EAAKKKRA+TRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEAKAIIPESVLKKERRNEEWASASKQEQEAAKKKRADTRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREA+LKGGFYVDPEAKLLFI+RIRGINA+ PKTR ILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRMILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSV+ELIYKRG+GKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL
Match: A0A0A0KCA3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447830 PE=3 SV=1)

HSP 1 Score: 323 bits (827), Expect = 5.43e-110
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL
Match: A0A5A7UTW1 (60S ribosomal protein L7-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00670 PE=3 SV=1)

HSP 1 Score: 321 bits (822), Expect = 3.13e-109
Identity = 169/172 (98.26%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MG+EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGQEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREARLKGGFYVDPEAKLLFI+RIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL
Match: A0A1S3CGH3 (60S ribosomal protein L7-4 OS=Cucumis melo OX=3656 GN=LOC103500626 PE=3 SV=1)

HSP 1 Score: 318 bits (816), Expect = 2.57e-108
Identity = 168/172 (97.67%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MG+EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAK YSKEYEEQE
Sbjct: 1   MGQEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKSYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREARLKGGFYVDPEAKLLFI+RIRGINAIDPKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREARLKGGFYVDPEAKLLFIIRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL
Match: A0A6J1DJV7 (60S ribosomal protein L7-4-like OS=Momordica charantia OX=3673 GN=LOC111021148 PE=3 SV=1)

HSP 1 Score: 302 bits (773), Expect = 9.03e-102
Identity = 157/172 (91.28%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEEAKAI+PESVLKK +RNEEW+ ASKQE EAAKKKRA+TRKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEAKAIIPESVLKKERRNEEWASASKQEQEAAKKKRADTRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREA+LKGGFYVDPEAKLLFI+RIRGINA+ PKTR ILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMHPKTRMILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 172
           NKATLNMLHRVEPYVTYGYPNLKSV+ELIYKRG+GKLNKQRTALTDNSIVEQ
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKLNKQRTALTDNSIVEQ 172

[Close]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL
Match: A0A1S3CBR1 (60S ribosomal protein L7-4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499162 PE=3 SV=1)

HSP 1 Score: 299 bits (765), Expect = 2.17e-101
Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 1   MGEEAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQE 60
           MGEE KA++P+SVLKK KRNEEW+LA +QELEAAKKK AE RKLIYNRAKLYSKEYEEQE
Sbjct: 1   MGEEVKALIPDSVLKKRKRNEEWTLAKQQELEAAKKKNAENRKLIYNRAKLYSKEYEEQE 60

Query: 61  KELVRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKV 120
           KEL+RLKREA+LKGGFYVDPEAKLLFI RIRGINA+ PKTRKILQLLRLRQIFNGVFLKV
Sbjct: 61  KELIRLKREAKLKGGFYVDPEAKLLFITRIRGINAMHPKTRKILQLLRLRQIFNGVFLKV 120

Query: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQV 173
           NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG+GKLNK+R ALTDNSIVEQV
Sbjct: 121 NKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKRRVALTDNSIVEQV 173

[Close]

BLAST of Cucsat.G3536.T5 vs. TAIR 10
Match: AT3G13580.3 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-76
Identity = 145/169 (85.80%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+LA KQELEAAKK+ AE RKLI+NRAK YSKEY+E+E+EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           ++LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN QRTALTDNSIV+Q
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173

[Close]

BLAST of Cucsat.G3536.T5 vs. TAIR 10
Match: AT3G13580.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-76
Identity = 145/169 (85.80%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+LA KQELEAAKK+ AE RKLI+NRAK YSKEY+E+E+EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           ++LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN QRTALTDNSIV+Q
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173

[Close]

BLAST of Cucsat.G3536.T5 vs. TAIR 10
Match: AT3G13580.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-76
Identity = 145/169 (85.80%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+LA KQELEAAKK+ AE RKLI+NRAK YSKEY+E+E+EL
Sbjct: 5   ESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEKEREL 64

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           ++LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 65  IQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 124

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYGYPNLKSVKELIYKRGFGKLN QRTALTDNSIV+Q
Sbjct: 125 TINMLRRVEPYVTYGYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQ 173

[Close]

BLAST of Cucsat.G3536.T5 vs. TAIR 10
Match: AT2G01250.1 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.6e-73
Identity = 140/169 (82.84%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+L  KQ +EAAKKK AE RKLI+ RA+ YSKEY E+EKEL
Sbjct: 3   ESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKEL 62

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           + LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 63  ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN QR ALTDNSIVEQ
Sbjct: 123 TMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQ 171

[Close]

BLAST of Cucsat.G3536.T5 vs. TAIR 10
Match: AT2G01250.2 (Ribosomal protein L30/L7 family protein )

HSP 1 Score: 271.9 bits (694), Expect = 3.6e-73
Identity = 140/169 (82.84%), Postives = 154/169 (91.12%), Query Frame = 0


Query: 4   EAKAIVPESVLKKAKRNEEWSLASKQELEAAKKKRAETRKLIYNRAKLYSKEYEEQEKEL 63
           E+K +VPESVLKK KR EEW+L  KQ +EAAKKK AE RKLI+ RA+ YSKEY E+EKEL
Sbjct: 3   ESKVVVPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEKEKEL 62

Query: 64  VRLKREARLKGGFYVDPEAKLLFIVRIRGINAIDPKTRKILQLLRLRQIFNGVFLKVNKA 123
           + LKREA+LKGGFYVDPEAKLLFI+RIRGINAIDPKT+KILQLLRLRQIFNGVFLKVNKA
Sbjct: 63  ISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLLRLRQIFNGVFLKVNKA 122

Query: 124 TLNMLHRVEPYVTYGYPNLKSVKELIYKRGFGKLNKQRTALTDNSIVEQ 173
           T+NML RVEPYVTYG+PNLKSVKELIYKRG+GKLN QR ALTDNSIVEQ
Sbjct: 123 TMNMLRRVEPYVTYGFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQ 171

The following BLAST results are available for this feature:

BLAST of Cucsat.G3536.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHP1	1.7e-75	85.80	60S ribosomal protein L7-4 OS=Arabidopsis thaliana OX=3702 GN=RPL7D PE=2 SV=1	[more]
P60040	5.1e-72	82.84	60S ribosomal protein L7-2 OS=Arabidopsis thaliana OX=3702 GN=RPL7B PE=1 SV=1	[more]
P60039	2.1e-70	81.07	60S ribosomal protein L7-3 OS=Arabidopsis thaliana OX=3702 GN=RPL7C PE=2 SV=1	[more]
Q7SBD5	1.1e-45	58.18	60S ribosomal protein L7 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / ...	[more]
Q5ZJ56	2.0e-44	55.23	60S ribosomal protein L7 OS=Gallus gallus OX=9031 GN=RPL7 PE=2 SV=1	[more]

BLAST of Cucsat.G3536.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659589.1	1.12e-109	100.00	60S ribosomal protein L7-4 [Cucumis sativus] >KGN45421.1 hypothetical protein Cs...	[more]
KAA0059342.1	6.47e-109	98.26	60S ribosomal protein L7-4 [Cucumis melo var. makuwa]	[more]
XP_008462217.1	5.30e-108	97.67	PREDICTED: 60S ribosomal protein L7-4 [Cucumis melo]	[more]
XP_038899684.1	3.56e-106	95.38	60S ribosomal protein L7-4 [Benincasa hispida] >XP_038899685.1 60S ribosomal pro...	[more]
XP_022153699.1	1.86e-101	91.28	60S ribosomal protein L7-4-like [Momordica charantia]	[more]

BLAST of Cucsat.G3536.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCA3	5.43e-110	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G447830 PE=3 SV=1	[more]
A0A5A7UTW1	3.13e-109	98.26	60S ribosomal protein L7-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CGH3	2.57e-108	97.67	60S ribosomal protein L7-4 OS=Cucumis melo OX=3656 GN=LOC103500626 PE=3 SV=1	[more]
A0A6J1DJV7	9.03e-102	91.28	60S ribosomal protein L7-4-like OS=Momordica charantia OX=3673 GN=LOC111021148 P...	[more]
A0A1S3CBR1	2.17e-101	89.60	60S ribosomal protein L7-4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034991...	[more]

BLAST of Cucsat.G3536.T5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13580.3	1.2e-76	85.80	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.2	1.2e-76	85.80	Ribosomal protein L30/L7 family protein	[more]
AT3G13580.1	1.2e-76	85.80	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.1	3.6e-73	82.84	Ribosomal protein L30/L7 family protein	[more]
AT2G01250.2	3.6e-73	82.84	Ribosomal protein L30/L7 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..73
None	No IPR available	PANTHER	PTHR11524:SF47	60S RIBOSOMAL PROTEIN L7-RELATED	coord: 5..173
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	GENE3D	3.30.1390.20		coord: 84..173 e-value: 7.0E-24 score: 86.3
IPR036919	Ribosomal protein L30, ferredoxin-like fold domain superfamily	SUPERFAMILY	55129	Ribosomal protein L30p/L7e	coord: 84..175
IPR012988	Ribosomal protein L30, N-terminal	PFAM	PF08079	Ribosomal_L30_N	coord: 9..80 e-value: 9.0E-24 score: 83.5
IPR016082	Ribosomal protein L30, ferredoxin-like fold domain	PFAM	PF00327	Ribosomal_L30	coord: 85..135 e-value: 8.0E-20 score: 70.5
IPR039699	Ribosomal protein L7/L30	PANTHER	PTHR11524	60S RIBOSOMAL PROTEIN L7	coord: 5..173
IPR018038	Ribosomal protein L30, conserved site	PROSITE	PS00634	RIBOSOMAL_L30	coord: 103..135
IPR035808	Ribosomal protein L7, eukaryotic/archaeal	CDD	cd01657	Ribosomal_L7_archeal_euk	coord: 84..172 e-value: 8.10922E-47 score: 148.829

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3536	Cucsat.G3536	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3536.T5.E1	Cucsat.G3536.T5.E1	exon
Cucsat.G3536.T5.E2	Cucsat.G3536.T5.E2	exon
Cucsat.G3536.T5.E3	Cucsat.G3536.T5.E3	exon
Cucsat.G3536.T5.E4	Cucsat.G3536.T5.E4	exon
Cucsat.G3536.T5.E5	Cucsat.G3536.T5.E5	exon
Cucsat.G3536.T5.E6	Cucsat.G3536.T5.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3536.T5.C5	Cucsat.G3536.T5.C5	CDS
Cucsat.G3536.T5.C4	Cucsat.G3536.T5.C4	CDS
Cucsat.G3536.T5.C3	Cucsat.G3536.T5.C3	CDS
Cucsat.G3536.T5.C2	Cucsat.G3536.T5.C2	CDS
Cucsat.G3536.T5.C1	Cucsat.G3536.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3536.T5	Cucsat.G3536.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000463	maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0022625	cytosolic large ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome