Cucsat.G3404.T13 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G3404.T13
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	SURP and G-patch domain-containing protein 1-like protein
Location	ctg1041: 6584407 .. 6589189 (+)
RNA-Seq Expression	Cucsat.G3404.T13
Synteny	Cucsat.G3404.T13

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGTGACTGAAAAATTTCCCTTTTAATATTTATATATTAACGAAACATCAACCAAAAGGCCTTCTCTTCTCCTCTTCTCTTCTCTTCTCTTCTTCTACTTCACTTTTCTTCGCCAAACACGAATTCCCCAACCTTCGCCTCACTTCATCATTTTTTCCAATTCCATTCTTCCTCCAATTCATCTTCCAATCCTCAATCGGGGTCACCGGAGCCTTATCTCCGTCTAGTTTTACAATCGAACCGGAAGATTTCCATTCTCAGATTCAATATTGTTCCGCAGTGCTTTTGGGTCAGTTCTTGATTCGTTTTGATCCGTTGAATAATCTTCCTTACTCTCTCTTGCTCTTTTTGTATTCTGTATTTTTTTGTGTTTTCACTTTTGTTTGTTGATTGTTCTTCGGGGCTTTTTGGTTCTGGAGCTAGGGTTTGTTTTCCTCCCTTTTATATGGTTCTACTTTTATTACGCGGCTGTTTTTTCATGTACGTAATATTTTTTTTATATGGGTTTTCGTGATTTTTACCTTATTAATCGTCGTCTGCAGTTTTGGGTGGTGTTAATTTTATTTAATATTCGATTACGACAATGACCTATGCCTAAGCAGATCGTGTTTAGAGATTTTGTGGATGATTTTAATATTAATTCGTCCGTGTTAGCATCTTGTTCTTATCTTTCTAATTAATTGGTTCTTTCTTGTGTTTGTACTTTTTTTTTCTGTTTAATTAGTGAAAAAGTCGAGGGATGTTTGAAGGGAGAAGGTTTTTGTCGATCCTTCGAGATTTCCCTATATATATGATTTGAATGTTCTTTTTCAAGGATTGTTGAACTCTTTGGTTGATTGCTTTTCTAATGATGATTCATTCTAAGCAGTCTGAGACTGAGTACTCATTGCCTCTCGATGGACAAAGGAATGCCCCCTACCCTTTTTGTCAACGACGGATCATTTATGGAAAGGTTTAAACAACTCCAACAGAAAAATGGTGAGAAGGATAAGGATAAAGATAAAGGTGCTACCTCTGAGGAGCCAAAACCAATCAAGATTATAGCAGGGACTTCAATTCCACATAATACTAGTGGTAAAACTAGTATGCAGTTTAAGGGTGGTGAGATTCGTAAGACTGCCCCAACTGGAAAACTTGCTTTCAGCTTGAAGCAGAAGTCTAAGCTTGTGGCACCTTCTGTGAAGTTAGGAGCAGATGAGGATGAAGATGAACCTGATGCGGTAGATGCATCTGATCATCTACCAGAGAAGCGTCAAAAGTTAGGTCCACAAGATGGTACTGAGCAGCCAGTACTTCAATCTGGTGATGGTAATACTAATTACTACTTTATACTGACACTCCTCTCTTTTGGGATTAATGGCAAGTATCTGCCAGAGTTTGTAAACCAAAAAACCTGGTCTGTTTAAGGCCATTTCTGGTTGATGCGGTGAATTGGTACTTAATTTCTGATGTTCTGTTATATGCATGTTCATTCATGATTCAAATTTTGTTACCCTGGAGCATCTATTTGTTGGCTTGCTTATATTTTTTATTGACAAGTTGACTCAAGTTATTGTCTTGAACCACTGTTATCTGCAGCTATTGAAAATTATTTGGGATAGGGAGGTGAGCAAATAACTTGTATATAATTTTCATTTTTAAGTCATTAAGAATGTCGGACCTCAATTGTTTTAAGCTGAAAAGAACTATGGTTCAGGGTGTTGCTCTCATGTCTGCATTCTTCCTTTCTGTTTTCCAACTTAAATTGGTCTGTGGAAGATTTCTTACTGATTTCATCTTCACCCTTTCATCTATTTAGCATTAGTTTTTGCATGAAGAGTCGCACCTTGTTCTTGAGACGATGGAAAACCATTTTTTGTTCTATTGGGGGGTTGGGGCATTATAGAATTACCATCTAGGTCACTATCCATTTCCCCCTTCAATTAACTCTAATGGCTTTGTTGGGACCGTGAGTTTAGATCTCTTCTAAAACTTGGACTGCTTCACTTGTAGAGTACAAAGCACTCTTGAAAATTTCTTGTCTCATGAATGCAGTGTATACCTTTAATACCTTTCAACATTGGTGGAAGAGATGTTCAATGAAAGAATTGGAATATGTAGCAGCCTGCTGCAAGAGTAATTTGCATTCACTTGTTCATGCTCTTGGTATTAATCAGTTTTATAAGTGATATGCAGCACCACCTTCACCAAGTGATCCTACAGTGAAGAAAGTTGCCGACAAGCTAGCAAGTTTTGTGGCTAAACATGGAAGGCAATTTGAGCATGTTACTCGCCAAAAGAATCCTGGAGATACACCATTTAAGTACGTTCTTGTTGTGCTTTAAAAGTTCCCATGCATTGTTCTTTCTTAACATTGCCGTTGCTACTGCTTTCTTGAATCTATTGCTTCATTTGTTTTTTTTTATGCTTAGCTTCTCACTTCTCAATAAATGTTTTTTTAACAAAATATCCATCAATCTTTGCAGATTTCTGTTTGATGAGAGTTCTGCAGATTACAAATACTATGAATATCAGCTAGCTCAAGAAGAAAAAGCTTTCTCAGAAACCGTCGAACCTAAATCCTCTAATGGTTTGGGCTTCTCACTTGATTCTCATATTATCTTTTTGAAAACAAGCATTTGTGTCATTGATGACTTAGGGTTTTCTCATGGGTTTTTCCTCGAGATCCCATTTTTTTATGAAATGTTTTTGGGAGATTAAATTGTTTTTCACATTCATTTTGCCCTTTCTATCTGTAGATGGTGGGAGCACGCAAACTTCTAAGCCAAGGACTGGTTCCCAGAAATCTCTCCAGCAGTCTTCCTCATCAAATTATCAAACCCCTGCCTCTGCTTTATATGAACCATCAGAAGATTCAAGGACTTCAGTGGGTTCATCTAATACTACTGCGTGGCCTGAAAGAGCAGGTAACTATTTGACACCGTGACTGTTTAGTGCTCACTATGTTTCAATGAATTGATATTGTACTTGACGTGTGGTTTTCACTTTTTAAGGTGAAACTAGACCACCACCATCTAGTGGAGATCCGATTGCAATGATGGAATTCTACATGAAGAAAGCTGCTCGTGAAGAGCGGATGAGGCAACCTAAACAGTCAAAAGATGAAATGCCTCCTCCTGCGTCTCTTCAAGGTATCAACCTGCTGGGGTGTAGCTGGTTGACCATTATTTGTTTAGCCTGTGGCATTAGTGGTTTTATTGCTTGAACTTCCTTTTCTATTTTGGGGGTGCTGTGCAGCTTCAGCTTTAGGGAAAAGAGGGCATCACATGGGTGACTTCATTCCCCACGAGGAGCTTGAAAAGTTCTTAGCTACATGCAATGATGCGTCTGCCCGGAAATATTCTAAAGAAGCTGCTGATAAGGCTAAAATTCAGGCTGATAATGTGGGGCACAGACTCCTATCTAAAATGGGATGGAAAGAAGGTTCCCTCCCTCCCTCTTTCTTCATATTTTTTCTCACACACCACATGTCACATTGCACATGGGTCAGTACATAGACCATTGGACTCGACAATGCTAGGATCTAGAATTTTTAATTAGATATATCTCCAAGTTCATTTTGCTAAAGGCTTTTAACAAGTCCTTAGACTTCTTTTCCTGGAGCTTACGTTGAACCCAAAGTTCATATTATAATTCCAGTTTATTTGAGAATTCATTTGGTAATGAAGGAGCCTTCTAATACTGGCAAGAGAACTGCAGGTGAGGGTCTGGGAAGCTCCAAGAGTGGAATTGCAGATCCCATAATGGCGGGTGATGTAAAAACAAATAACTTGGGTGTTGGAGCCCATCAACCTGGTGAGGTGACTCCTGAAGACGATATATACGAGCAGTACAAAAAACGAATGATGCTTGGTTATCGTTACAGACCGAACCCACTGGTATTTATTTATCACACCCATTGAAGTTGCGCTTACTTCAATACCTAGTTAATCAAGTAGTTTTGATGTCATACTTTTTTGTTTTCGTAGAATAACCCTCGGAAAGCATACTATTGATTGATGACGGTTCTGCAAAGGCACTTTGATCATTCTGGCTCTGTTTGAAAATTATGAGAAAAGCCAAACTACGTGGTGGGAGTGGAAATTATCTCGATCTATTGTGGCATAATTGATGTCATAACTCAATAAATAATCAATAGATGTAGTTCTTTTTATCCTGTCATCGTTTTGTTTTTTTTTCCCTTCATTTTCCATGTGGTGTGGGATTCGGGGATCGGGATCAGGGTCAGGGCGGGGTTTTGTTTAATCCTATTGTGCTTGATCAGTATACTGGACTCGTCCTATTTTTGTGTTAAATATGCATAACTTGAAGCGTTAATTACCATTCCTTTTTTTCTTCTTTTCTTCTAAGCTCCATTGGCTTGCTAGAGCATCATTCTGTAGTACTTCTCGGATAATTGTGGAGTTTGACCTAAACAAGTTTTGGCTTTTAGATGAACTACCCATTCCCTACCCCCCTCACCTCCAATGTCATCAATGTTCTTTCTCTTGCTTTTCCCACCTTTTTGACTTAAATTGTTTCAATTGAGCAAAAACTTTACAGCGTTTTCCCCTTCTGTCGTGTTCTTTCTCCATTTGTGATTCTGCATCAGGTTTCATAGACAGCAAAACCAATTCGATTCTGACTCAAGATGCGGTTTACCACGATCAACCTCGCTTCCTCATTTGTAGCTCTAAAAGCACCACTCTTTTTTGCAAATGTGATTAAAATTTAAGTTATTTTTCAAGAATTGAGGCAATTTGTCAATATTTATCGATGGGAAGAATCAAGTTATTTTTCAA

Coding sequence (CDS)

ATGGGTGACTTCATTCCCCACGAGGAGCTTGAAAAGTTCTTAGCTACATGCAATGATGCGTCTGCCCGGAAATATTCTAAAGAAGCTGCTGATAAGGCTAAAATTCAGGCTGATAATGTGGGGCACAGACTCCTATCTAAAATGGGATGGAAAGAAGGTGAGGGTCTGGGAAGCTCCAAGAGTGGAATTGCAGATCCCATAATGGCGGGTGATGTAAAAACAAATAACTTGGGTGTTGGAGCCCATCAACCTGGTGAGGTGACTCCTGAAGACGATATATACGAGCAGTACAAAAAACGAATGATGCTTGGTTATCGTTACAGACCGAACCCACTGAATAACCCTCGGAAAGCATACTATTGA

Protein sequence

MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY

Homology

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot
Match: Q94C11 (SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g52120 PE=1 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.1e-54
Identity = 99/120 (82.50%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGD+IP EEL+KFL+ CNDA+A+K +KEAA+KAKIQADNVGH+LLSKMGWKEGEG+GSS+
Sbjct: 324 MGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSR 383

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
            G+ADPIMAGDVKTNNLGVGA  PGEV PEDDIYEQYKKRMMLGY++RPNPL NPRKAYY
Sbjct: 384 KGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQYKKRMMLGYKHRPNPLGNPRKAYY 443

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot
Match: Q8IWZ8 (SURP and G-patch domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SUGP1 PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 8.7e-28
Identity = 58/121 (47.93%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCND-ASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSS 60
           +GDF+P +ELEKF+ T       R+       + K+  +N+G+++L KMGWKEGEGLGS 
Sbjct: 525 IGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSE 584

Query: 61  KSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAY 120
             GI +P+  G    +  G G  +P E++ EDD YE ++KRMML YR+RPNPLNNPR+ Y
Sbjct: 585 GQGIKNPVNKGTTTVDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPY 644

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot
Match: Q8CH02 (SURP and G-patch domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sugp1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-27
Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCND-ASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSS 60
           +GDF+P +ELEKF+ T       R+       + K+  +N+G+++L KMGWKEGEGLG+ 
Sbjct: 523 IGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGTE 582

Query: 61  KSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAY 120
             GI +P+  G    +  G G  +P E++ EDD YE ++KRMML YR+RPNPLNNPR+ Y
Sbjct: 583 GQGIKNPVNKGATTIDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPY 642

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot
Match: Q68FU8 (SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Sugp1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.3e-27
Identity = 57/121 (47.11%), Postives = 80/121 (66.12%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCND-ASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSS 60
           +GDF+P +ELEKF+ T       R+       + K+  +N+G+++L KMGWKEGEGLG+ 
Sbjct: 524 IGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGTE 583

Query: 61  KSGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAY 120
             GI +P+  G    +  G G  +P E++ EDD YE ++KRMML YR+RPNPLNNPR+ Y
Sbjct: 584 GQGIKNPVNKGATTIDGAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPY 643

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot
Match: Q8CH09 (SURP and G-patch domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sugp2 PE=1 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 5.9e-08
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 0


Query: 20   ASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGV 79
            A  +K       + K+   NVG ++L KMGWKEG GLGS   GI +P+  G +     G+
Sbjct: 979  AKKKKPKDMEFSQQKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGE-GL 1038

Query: 80   GAHQPGEVTPEDDIYEQYKKRMMLGYRYR 109
            GA  P +   ++D ++ +++RMM  YR++
Sbjct: 1039 GADGPEQ---KEDTFDVFRQRMMQMYRHK 1063

[Close]

BLAST of Cucsat.G3404.T13 vs. NCBI nr
Match: KGN45149.1 (hypothetical protein Csa_016640 [Cucumis sativus])

HSP 1 Score: 250 bits (639), Expect = 1.82e-79
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 327 MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 386

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 387 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446

[Close]

BLAST of Cucsat.G3404.T13 vs. NCBI nr
Match: NP_001292719.1 (SURP and G-patch domain-containing protein 1-like protein [Cucumis sativus] >ACA24495.1 gamma reponse I-like protein [Cucumis sativus])

HSP 1 Score: 250 bits (639), Expect = 1.82e-79
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 327 MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 386

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 387 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446

[Close]

BLAST of Cucsat.G3404.T13 vs. NCBI nr
Match: XP_038898342.1 (SURP and G-patch domain-containing protein 1-like protein [Benincasa hispida])

HSP 1 Score: 249 bits (636), Expect = 4.74e-79
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYS+EAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 324 MGDFIPHEELEKFLATCNDASARKYSREAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 383

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 384 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 443

[Close]

BLAST of Cucsat.G3404.T13 vs. NCBI nr
Match: XP_008461265.1 (PREDICTED: SURP and G-patch domain-containing protein 1-like protein [Cucumis melo])

HSP 1 Score: 249 bits (635), Expect = 6.88e-79
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARK+SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 325 MGDFIPHEELEKFLATCNDASARKFSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 384

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 385 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 444

[Close]

BLAST of Cucsat.G3404.T13 vs. NCBI nr
Match: KAA0058647.1 (SURP and G-patch domain-containing protein 1-like protein [Cucumis melo var. makuwa] >TYK10454.1 SURP and G-patch domain-containing protein 1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 249 bits (635), Expect = 1.09e-78
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARK+SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 342 MGDFIPHEELEKFLATCNDASARKFSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 401

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 402 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 461

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL
Match: A0A0A0K8D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428860 PE=4 SV=1)

HSP 1 Score: 250 bits (639), Expect = 8.79e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 327 MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 386

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 387 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL
Match: B3TLK2 (Gamma reponse I-like protein OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 250 bits (639), Expect = 8.79e-80
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 327 MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 386

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 387 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 446

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL
Match: A0A1S3CDV7 (SURP and G-patch domain-containing protein 1-like protein OS=Cucumis melo OX=3656 GN=LOC103499904 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 3.33e-79
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARK+SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 325 MGDFIPHEELEKFLATCNDASARKFSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 384

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 385 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 444

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL
Match: A0A5D3CGY0 (SURP and G-patch domain-containing protein 1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001030 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 5.27e-79
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARK+SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK
Sbjct: 342 MGDFIPHEELEKFLATCNDASARKFSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 401

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 402 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 461

[Close]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL
Match: A0A6J1CZP9 (SURP and G-patch domain-containing protein 1-like protein OS=Momordica charantia OX=3673 GN=LOC111016266 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 1.69e-78
Identity = 117/120 (97.50%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGDFIPHEELEKFLATCNDASARKYS++AADKAKIQADNVGH+LLSKMGWKEGEGLGSSK
Sbjct: 321 MGDFIPHEELEKFLATCNDASARKYSRDAADKAKIQADNVGHKLLSKMGWKEGEGLGSSK 380

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
           SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY
Sbjct: 381 SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 440

[Close]

BLAST of Cucsat.G3404.T13 vs. TAIR 10
Match: AT3G52120.1 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein )

HSP 1 Score: 211.8 bits (538), Expect = 2.9e-55
Identity = 99/120 (82.50%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSK 60
           MGD+IP EEL+KFL+ CNDA+A+K +KEAA+KAKIQADNVGH+LLSKMGWKEGEG+GSS+
Sbjct: 324 MGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQADNVGHKLLSKMGWKEGEGIGSSR 383

Query: 61  SGIADPIMAGDVKTNNLGVGAHQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 120
            G+ADPIMAGDVKTNNLGVGA  PGEV PEDDIYEQYKKRMMLGY++RPNPL NPRKAYY
Sbjct: 384 KGMADPIMAGDVKTNNLGVGASAPGEVKPEDDIYEQYKKRMMLGYKHRPNPLGNPRKAYY 443

[Close]

BLAST of Cucsat.G3404.T13 vs. TAIR 10
Match: AT3G52120.2 (SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein )

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-19
Identity = 44/59 (74.58%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 1   MGDFIPHEELEKFLATCNDASARKYSKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSS 60
           MGD+IP EEL+KFL+ CNDA+A+K +KEAA+KAKIQADNVGH+LLSKMGWKEG  L  S
Sbjct: 324 MGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQADNVGHKLLSKMGWKEGAYLHHS 382

[Close]

BLAST of Cucsat.G3404.T13 vs. TAIR 10
Match: AT3G52350.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 55.5 bits (132), Expect = 3.5e-08
Identity = 29/78 (37.18%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 26  SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPG 85
           S+ +     I + N+G +LL K GWKEG GLG ++ GI  P+ A + K N  G+GA +P 
Sbjct: 68  SESSNPSTAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQA-EPKHNKQGLGAEKPA 127

Query: 86  E---VTPEDDIYEQYKKR 101
           +     P+D  +E+  K+
Sbjct: 128 KRKPAQPQDTAFEEVSKK 144

[Close]

BLAST of Cucsat.G3404.T13 vs. TAIR 10
Match: AT5G08535.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 26  SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPG 85
           S  ++  A I + N+G +LL K GWKEG GLG ++ GI  P+ A + K N  GVGA QP 
Sbjct: 5   SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQA-EPKHNKRGVGAKQPA 64

Query: 86  E------VTPEDDIYEQYKK 100
           +         ++++ +Q KK
Sbjct: 65  KRKVAQPQAKDEEVSKQSKK 83

[Close]

BLAST of Cucsat.G3404.T13 vs. TAIR 10
Match: AT5G08535.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 26  SKEAADKAKIQADNVGHRLLSKMGWKEGEGLGSSKSGIADPIMAGDVKTNNLGVGAHQPG 85
           S  ++  A I + N+G +LL K GWKEG GLG ++ GI  P+ A + K N  GVGA QP 
Sbjct: 30  SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQA-EPKHNKRGVGAKQPA 89

Query: 86  E------VTPEDDIYEQYKK 100
           +         ++++ +Q KK
Sbjct: 90  KRKVAQPQAKDEEVSKQSKK 108

The following BLAST results are available for this feature:

BLAST of Cucsat.G3404.T13 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94C11	4.1e-54	82.50	SURP and G-patch domain-containing protein 1-like protein OS=Arabidopsis thalian...	[more]
Q8IWZ8	8.7e-28	47.93	SURP and G-patch domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SUGP1 PE...	[more]
Q8CH02	3.3e-27	47.11	SURP and G-patch domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sugp1 P...	[more]
Q68FU8	3.3e-27	47.11	SURP and G-patch domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Su...	[more]
Q8CH09	5.9e-08	35.96	SURP and G-patch domain-containing protein 2 OS=Mus musculus OX=10090 GN=Sugp2 P...	[more]

BLAST of Cucsat.G3404.T13 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45149.1	1.82e-79	100.00	hypothetical protein Csa_016640 [Cucumis sativus]	[more]
NP_001292719.1	1.82e-79	100.00	SURP and G-patch domain-containing protein 1-like protein [Cucumis sativus] >ACA...	[more]
XP_038898342.1	4.74e-79	99.17	SURP and G-patch domain-containing protein 1-like protein [Benincasa hispida]	[more]
XP_008461265.1	6.88e-79	99.17	PREDICTED: SURP and G-patch domain-containing protein 1-like protein [Cucumis me...	[more]
KAA0058647.1	1.09e-78	99.17	SURP and G-patch domain-containing protein 1-like protein [Cucumis melo var. mak...	[more]

BLAST of Cucsat.G3404.T13 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8D7	8.79e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428860 PE=4 SV=1	[more]
B3TLK2	8.79e-80	100.00	Gamma reponse I-like protein OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
A0A1S3CDV7	3.33e-79	99.17	SURP and G-patch domain-containing protein 1-like protein OS=Cucumis melo OX=365...	[more]
A0A5D3CGY0	5.27e-79	99.17	SURP and G-patch domain-containing protein 1-like protein OS=Cucumis melo var. m...	[more]
A0A6J1CZP9	1.69e-78	97.50	SURP and G-patch domain-containing protein 1-like protein OS=Momordica charantia...	[more]

BLAST of Cucsat.G3404.T13 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52120.1	2.9e-55	82.50	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch...	[more]
AT3G52120.2	4.4e-19	74.58	SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch...	[more]
AT3G52350.1	3.5e-08	37.18	D111/G-patch domain-containing protein	[more]
AT5G08535.2	1.0e-07	38.75	D111/G-patch domain-containing protein	[more]
AT5G08535.1	1.0e-07	38.75	D111/G-patch domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 35..82 e-value: 3.4E-18 score: 76.4
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 38..81 e-value: 1.2E-15 score: 57.1
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 37..84 score: 17.041147
IPR040169	SURP and G-patch domain-containing protein 1/2	PANTHER	PTHR23340	ARGININE/SERINE RICH SPLICING FACTOR SF4/14	coord: 1..120
None	No IPR available	PANTHER	PTHR23340:SF0	SURP AND G PATCH DOMAIN-CONTAINING 1	coord: 1..120

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G3404	Cucsat.G3404	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3404.T13.E1	Cucsat.G3404.T13.E1	exon
Cucsat.G3404.T13.E2	Cucsat.G3404.T13.E2	exon
Cucsat.G3404.T13.E3	Cucsat.G3404.T13.E3	exon
Cucsat.G3404.T13.E4	Cucsat.G3404.T13.E4	exon
Cucsat.G3404.T13.E5	Cucsat.G3404.T13.E5	exon
Cucsat.G3404.T13.E6	Cucsat.G3404.T13.E6	exon
Cucsat.G3404.T13.E7	Cucsat.G3404.T13.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3404.T13.C1	Cucsat.G3404.T13.C1	CDS
Cucsat.G3404.T13.C2	Cucsat.G3404.T13.C2	CDS
Cucsat.G3404.T13.C3	Cucsat.G3404.T13.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G3404.T13	Cucsat.G3404.T13-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
biological_process	GO:0006397	mRNA processing
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding