Cucsat.G3286.T12 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G3286.T12
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionfatty-acid-binding protein 1-like
Locationctg1041: 4466355 .. 4474077 (+)
RNA-Seq ExpressionCucsat.G3286.T12
SyntenyCucsat.G3286.T12
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTACTCTTGTTCATTCTCGTCCCTGAACTGCCAACCCATGCTCTTTAAAATCTTTTGGTTTTTGTATGATTTGTCATTGCAGTCATGGGAAAGGTCGAGGGGCAAGGCGAGTCATGGCATGGTCATGTAACTGCTGTAAGTGTTTCTCCAGAATATCGCAGGCAACAATTAGCCAAGAAGCTTATGAACTTGCTTGAGGATATTAGCGACAAAGTGTAAGATGAACTTAATTTATTTCTGGTTCAACAGTGTAATTTTAGTTTTTCTCTTCTTCTTGAGCCTTATATTTAATGTAGATTTTTTTTTCCCGCTTCCTGGCAGTGATAAAGCCTATTTTGTTGATCTCTTTGTGAGGGCATCGAACACCACTGCAATCAAGATGTATGAGAAGGTAGGTTTCCTCTTCTAGGACTGCCATTCATCTAGTCTTCTAATTTTTTTAGTTGAAGTGTATTTCAATCTTTGATGGTTTTGTTTTTTAAGAAACGTGCCAGCGGAGCTCCATGCTACTCATACTATGATACTTTAGTTTCTTAATAATAATTCAGTTCCATCAAAGTTTTATATTGTTGATGACTTGAAATAATGAAATGTTCAGGGATGCAAAACCTCCTGGTGGTATAAGTCAAAGAGAGAACATAAATACAAAAAAGAGAGTTCACAACTCAACTAGGGATCTTTCGTCTGGTAGAAATCATGTTTTCCTTTGGGCTTCGCTTTCAAAGACCTCTTGCAACTGTTCTATAGGTTTTATCTTGTATAGTTGGAGTTTCTTTAGAGGGATTCCTCTCTCTTTTGTGAACATGGTTTTCAGTAGCCCTTTACATTATTTCATTTTTATCTCAATGAAAGTCGTTTACTTAATAATCAATTAGGTTGAGAAGAAGGGTAAGCTTCCAAACATAATATCCCTCTCCTTCCCCTAGGCCCAATTGTCATGTTCAATCACTCTACTAGAGTTCGCCCAAATGGTTTTAGTCTTCTTTTCCAGGACTGAGGGGAAAAACACAAAGCATCAAAGGAATAAAGTTGTGAAGCAACCTAGGAGATACCATATTTTGGCTGAAAATAGTTAAAAGCAAAGATCAATGGATCAAGAGTCTCAACTCTCATCTGCTTTCATATGCTGGATACACCAATTTGGGAGAAGGAAGTTTAAGTTTTTTGTTTGAACTTTGTTCTAAGGACTGATGGCTGTTAGTGCTAACAAAAGACTCCACGTCAAGACTTTGGTCTTCTTTAGATGGTTATGCTTCCATATGACATAATCAGACGTAATTCTTAAGAAAAACCAGCCTTGATCTCAACTGAATAGAGTAAAAATCTTGGTAGGTGAAAACAAGCTGAGGAATCACTTCCAAACTTTGATGTATTGCTGGTTAGTAACCTAACAGTTTTCCAACTTGTACCTCCCTTTCCAATGGGAACCTATTAGGAACCAAAGTAGTATGGGCTACTTTTTTCCCACATTGGTTAGAGTGGGATGACCAATGTGGTACTTAAGTGGCTTGGCTCTCCCACCTCAATAGCTGGCTTTTGGTGTGTGATTCTCCAAGGTGCCCAAGTATCTAACTGAACCTTTACAACCATTTAACAAGGATGTTCACATTTATTTTCTTAAATTTCCAATGCCTAGCCCCATACTCTTTTGGTCATGTGGCAACATTCCACTTGATCGTGAGAATCTCTATTCAAGTTAGGAGATGGGACCTTAAAAGTATTTGTAAGCATTTTTCCAAAACTAGGATACCCTAGTGATTTGAATAGCAGAACATTCCACATTTTCAAGAATGGAAACTATATCCAAGTTTGGAAAATTCTCTTGTAGCAAGAAGAGAGAAAGCATTAATTTCACTTCACAGGTAATGTTGGATAGAAGAAGAGTTACTCTTTGGTTACCTGGGGTCAGCAAGATAACTCTAAATTTGTGTGTGGGGTGGGGTGGGGTGCAACTGGCGAGTACTTTATCTTTACATACACACACACATATATACAATTACTGTTTTATTTGTCCTTGCTCTATCACCTAATATGTATTCATTCAAAGCTAAACTGCTATTCTGTATCAACTTTCTGAAAGTTGTATCAGATTTATTCCAATTTTACAACGACCTCGTTGTGGATTTTTTTTTTAATGTTATGTAGTCTCTAAGATGTTAATTTCTCGTAGTGTAATAAGTATCTAAAAAAAGGAAATTCCTGCTCATTTTCATATACCCTCCTGGGATTAAGTGTAGATTTCTCAGCTCTTCTGCCCCTAATTTTTTACTTTTCTGCAAAATGAATCATATGGTATTCCGTTTGTAGTATTTCTGCATATGAATTCATTACCATCTGGTCTAGTTGTTATTTGTTCAGTGGAGATGGAAAAGGAGGGACGGAAAGATGTCGAAGTTTGCAATAGCGATAATACTTCATAGATCCCACCCACCCCCACCCCAAGTGATGTTATATGTGTGATTAAAATATATATCGTATTATATGCCAAATGGAAATTTACAATCTAAAATTAAAACTCTGGAAATGCTGGTTTGAAGAGAAGTATTCAGTAGAAAAGTAAAGAAAAATGCAAAAACATTCCCGAGTCCTATAGTGTTATCTACAGCAACCTCACATAGGTTTCCTTTTCCCAGTTAGAGCATGAGTTTTTGGTCATATTTCATTTTATAAGATATTATTTACGTTACATAACCCTTTTATTTTGATGCTCAGTTGTGTTTTTATAAGTTCCCCTGTTGACATAACTTTTCTATCTTCATATTGAGGAAGGTGATACTTACCTTGACCATTCTTTTTGCTTGTTTTTTTCCCTCGACCAGCTTGACTATATTATCTATCGGCGTGTGCTTCGTTATTATTCAGGGGAGGAAGATGGATTAGGTAAGTCTACACTACCCCAAGAGAACTAAACAAATTTGTTTGTTAATTAATTTCTTACTTTACTTCATTATGGTTTACATTCAGATATGAGGAAAGCATTATCGCGGGATGTCGATAAGAAGTCCATCATCCCGCTAAAAAGGCCAGTGACTCCTGATGAACTAGAATACGATTAACTCAAGAGAAATGAAGTATGATCATTGATGGAGAAGACATATCATGTACGCATGAGTTGACAAGAGCTAGCAAGGTTAGCAATCGTCATCTTGAAAAAACTATTGTACTTGTATTCTAAAAACGTTTATATAACTTGTATAATTCAAATGAAAAATCAAGCTGAACCTTTTTCTTCAACTATTTGATACAATAGTTTGTACTTAAACTTGAAACTGTTAGTTTCATCCAATTCTTTTTCAATGATCACTTAATGTTTTTTGGGTACTCTTTTTTCTGGTTCTCTTGTTTTGTGTTTTAAGGTGAAGAATTCTTCAAAAGATAGATGAACCTCAATATCCTTAGAAGCTGCTGCTCTTGATGTGCACAAGGATTTGCAATTGTTGTAGTTTAGTTGAAAGTTGTGAACCTAAATTCAGTCATATTCAATTGGAGAAGTAATAAGTCACATTATTTAATAAAATTTAATGAACTTTTTTTTTAAAAAGGCCAATCAACATAGTTTAGGACTTGGGACTTTGTTTGTTTGGTAGTGTTCTATTTATTGAGTTGAATGAATATGTGTTTGGTAGGTTGGCTGAATTATGTTTTTATTTATTTATTGGAAATAATATTTTTATGTTTTAGTGCCTTCATATTTTAAATTTTAAAATTTTAAAATGTAGAATTATCTAAGGAAATGTAAAAACTTTTAAAAAGTATAGTGTTTTGTGTTATAAGTTCAATTATTTGTTAAATTAATATGTTGTATATTATGTGACATTGCAGCATGATAACTATACAATATTTTAACTTAGAAAAGCAAGTCTTGTAAATTAATTAATAATAGTTAGTTTGATGACAATTAACATGAATTTCTATTTTAGGGTGGAACGTTTGACTTTTTTTTTTAATAATGTTAATTAAAAAGTTAATGAAAAAAATAATTTACTTAAAAAACTATTGACAAAAATAGAATAGTTAAGTTTTGTACACACTACACAACACACGACTTGGCTCATTTGTCTATTTCATGTGGCAATCAACGTTGCCATGTTGTTCAACATGCGGTCATCATAGATCAAGTACACGATTTTATCCATCTTAAAACCTTACACACAGCCCATTTTGCCTAAAAATCCCCCATCTCCCCTTGTCTGCAACTTTCGCCATCCTCTTCGTGGTCTTACCATTCATCATTAATTGACTAGAAGTTTAAAGGTATGTTTATTTCCCCTTCTTTACATATATATATGTTTTGTTGGGTAAGAAAACAAGAAAGAGTGAGGGGTGGGTTATGAAATAAGTTAATAGATATCTTAGATTATGTAACATTCAATGATGTGTTAAATTATGAAAGAGAGTTGTTTGATAAAGTAGTATGAAAAATTATAGACCTTTAGTAAGATTTAATAATTAGAAGAGAATAGAAAATAAATAAATATATCATGAGGACCTAAGTAATAAGAATTGTTTGTGTATATATAAATAAAAGAGTATATAAATACTAAATAAAAGAATTAACTTTTGCTATTTTGTTTCAACTAAAAAAGACACTTTTCCGCCAAAAGGAAAAAAATGGTATCTCTCCGCTTCCCATTCTCGTTTCCTCAGCCACCAAAGCCCCCCCGTCGTACCTTTCTCCGTCCCTCTTACGCTGCCGCTGTCGCTGCCGGCGGCGCTGCTGCGGCAGTCGGATTTGTCGCTGCAGCTAGGAACTCGACCAACCCACAAACCCCATTTCTTGAATGCGCATTGAATTTGCTCTTCTCAAGTCATTCATCTCCCTTGTGGGCTTCTCTCTCTCTGGCGGAAAATTCGGCCGCCTCTTCAGTTGTTGATTCCAAGACTGGATTTTCATTTCCCTCTGTCATTGGAGATTCTCAGCAGCTTCTTGGAATTGGGTTGCGAAGAAAAGCCATTTTGGGACTGAAGAACATCAACGTTTATGCATTTGGTATGTTATCGCACATTTCTACTTTTGAGGAGCTTTTGTGATTTGATTTTGGATGTTGAATTTGTGCTGATTTAGCAGATGGGCATTTGTGATCTTCACTGAATTAAGAAGTTTTTATTGTTACTTTCGAAAATAGCATTTATTCGTGACTGTCTAGGGCTTTGGGAGACTGTTTTTGGAAAGAATTTCCTTCTCTTATCCGTTTTTAACAGTGACACTGGATGGCCCAGATATACTTTTGTGTTCTTTTCCAGCTGAAATCATGATTTGAATTTGAAAGGTTTGTATTGTGTAACTTCTTCAGTATTTCTCAAAACAAATCAAACAAAGTGAAGGGAACAAAAGAAAAAAAATCTTTCAAAGTAGATAGGAAAGCAACATAAGATAGATAACTGGTACAAGACAGTGACTCAAATATGCTTTCACTGATTTTTTGTTTTGGAAAAAAATGCAAGATTATTTTGAAAACCATTTCTAAAAGCAAACCACAGGATTCACCTATATGGAACATAGGCTGCATAGCTCAACCACCGAGGTCGGGTTCGAATTTTCCATCCTGTATATTACTATTGAACTAAAAACGAAGAAGGAGAAGAAGAAGCTAACCACAAGAATCGCCATTATTAGATAATAGACCATAAATTTCATGCTCAGTTTTTGGTTTGTGCTTATTGAAACTGAAGCTTATAAACACTACTTCCACCTATTGATTTTTTTGTTCATTATCTACCTTTTAGGAGTGTTTTTAAAAAATCAAGCTAAGTTTGAAAACTTTAAAAGTACTTTTTGTTTCTGAAATTTAGTTGAGGATTCTAGTGTTCAATTCAAAAAGATGAAAACCATAGAAAGAAGCTGTAAAAAAACAAATATAATTTTTCAAAAACTATAAATAGAAAGCCAAATGATATTCAACCAGGCCTTTATTATTTCTCCTATTTAATTTTGAAAAAGGGAAGTGACTGTAATAGAATTTACTAAATGGATAACTGAAGCTACTGTAGTATTTATATCTCTTGAAAAAGTGGGTGTACCTTAGTTCATATAAGCTGAAGTTCATGGCTAATGTGGTCGTTCCATTTCAATCAGATCATCCTTTTTATGATTAAGATAGTAAGCTTGGGCTTGACTGTCTCCAACCCTGTGGGGAGTCATTTTGGCTTCAATAGAAGTCAGAAATGATCTGAGTTTACAACCTTATTTGAACACGATCTTTTCTATAGGTTGTACAACTGTCTTTGAGTTCTAAAGAAATGAACCGAGCTTAGACTTCAAATTTGTGCCAACCTTTCCTTTAACATCCTATTGTTCTAGCTTTGCATTAAGTTTCTTTGTTGAACTGTAATCTATAGAGTTCACAGATTTTACAACATTTGGGAGAACGATGGAATGAACTTCCAATTGAGCAGAAGATGGTGGAAAGGTGAGTGGTTGAGATTTGCCAAGATTCACGATCTACAATATTTGTTATGAGAGAAACTTTTCTGATGCGAACCAATCTGTATGAAATTTCTTAAATCCATTATGTCACTGTGCATATGCTTTTCCGTTTTTGGGTTATTGACATTTTTTCGTCCTAAGCTATCTGTTATTCAAATGAGTGACTGCGTGTAGGTGTTTATGCTGACAATGATGACATAAAGGAATCACTGAGTGAGAAGTATGGGAAACTCACTGTAACTGAACTACAAGAAAAGGACTTTGACAAAGATGTCATGGAATGTGACATATGCATGACTGTTAGACTTCAAATTGTCTATGGAAAACTGAGCATCCGATCGGTTCGAAGTGCATTTGAAGAGTCTGTTGGAAACCGACTCCAGAAGTTTGGGGGTTCAGACAACAAAGAATTGCTTGACAAGTAAGTCATTCTATGAGTTGTGTGGTTTTTGTTTTATCTCGGCCATCACCATGTCATTATAACGCTGTCTCTATCATCCCCTACTCTTGTATCCTTATAGCTTTGTTTCTTTGCAGATTCACTTCCCAATTCAAAGACGAGTACAAAATACCTCGAGGATCGGTGATCGATCTCTCAAAAGAACGAGGGCATGTCCTCCGTACAATCAGTGAGATTTCGATCCTTATTAGTTAGTGCAGCAATGTAGGATTGCATCTTATGAAGAACCATTACTCATGCATTTGCTTGGTGTGTTGGATTTTTGTTTTTGAAAAACATCTCACATCTGAATGCATCTGCCAACCAACTAACAAACATTTTACTTTTTAATCTGAATACGGAATGTAATTAAATTCATATGCAGTTGATGGAAAGGAAGTGGGAAGCATCCAGAGCCAACTGTTGTGTAGAGCCATTTTAGATCTCTATATTGGTGAAGATCCATTTGATAAACAAGCCAAAGAAGACGTCAGACAAGCGTTAACTTCTATTCTTCAGAAGTAATAGCCAAAAAACAAAGGGAGAGAAAAATGAGGAGATTGGTGCTTCCTTCTTGTTTTGATATTGCTGATGTTTAAAATGGAGATTTTTTTTGGTCAATTTGCATTGTGCCCTCTTTTAACCTTAATTTCATTCTCTTCTTTTTCTTTTTAGAGAATCGAAATTCTAACTTAGTAATTAATATTGTACAAGTTTTATTGTTTTTTGACACTTTGATTTGAAGTTTGTTTCTATCTTACGTGGGGCATTCTAATTACTTGTAGTTGTACCTTACACGTGCAAATATGTTTTTATTTAATACTCAAGCCACATTATTCAAACTTTGGCTAAAAAA

Coding sequence (CDS)

ATGGTATCTCTCCGCTTCCCATTCTCGTTTCCTCAGCCACCAAAGCCCCCCCGTCGTACCTTTCTCCGTCCCTCTTACGCTGCCGCTGTCGCTGCCGGCGGCGCTGCTGCGGCAGTCGGATTTGTCGCTGCAGCTAGGAACTCGACCAACCCACAAACCCCATTTCTTGAATGCGCATTGAATTTGCTCTTCTCAAGTCATTCATCTCCCTTGTGGGCTTCTCTCTCTCTGGCGGAAAATTCGGCCGCCTCTTCAGTTGTTGATTCCAAGACTGGATTTTCATTTCCCTCTGTCATTGGAGATTCTCAGCAGCTTCTTGGAATTGGGTTGCGAAGAAAAGCCATTTTGGGACTGAAGAACATCAACGTTTATGCATTTGGTATGTTATCGCACATTTCTACTTTTGAGGAGCTTTTGTGA

Protein sequence

MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECALNLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKNINVYAFGMLSHISTFEELL
Homology
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BLAST of Cucsat.G3286.T12 vs. ExPASy Swiss-Prot
Match: Q9M1X2 (Fatty-acid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=FAP1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.8e-22
Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVS RFPFSF QPP+           A AV+    AAA G   AA  S NP  P LE A 
Sbjct: 1   MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAA--SRNPSHPILEWA- 60

Query: 61  NLLFSSHSSPL--WASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGL 120
              FSSH S L  W S++LA+     SVV+ KTGFSFP+ IGDS++LLG+GLR+K++LGL
Sbjct: 61  ---FSSHRSSLSPWGSITLAD----ESVVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGL 120

Query: 121 KNINVYAFGMLSHISTFEELL 140
           KNI+VYAFG+ +     ++L+
Sbjct: 121 KNIDVYAFGVYADCDDVKKLV 131

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BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match: XP_004146982.1 (fatty-acid-binding protein 1 [Cucumis sativus] >KGN44811.1 hypothetical protein Csa_015705 [Cucumis sativus])

HSP 1 Score: 241 bits (615), Expect = 1.48e-77
Identity = 129/139 (92.81%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

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BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match: XP_008451354.1 (PREDICTED: fatty-acid-binding protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 230 bits (587), Expect = 1.16e-73
Identity = 124/139 (89.21%), Postives = 128/139 (92.09%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

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BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match: XP_008451353.1 (PREDICTED: fatty-acid-binding protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 230 bits (587), Expect = 2.62e-73
Identity = 124/139 (89.21%), Postives = 128/139 (92.09%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

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BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match: KAA0064077.1 (fatty-acid-binding protein 1 isoform X1 [Cucumis melo var. makuwa] >TYK26236.1 fatty-acid-binding protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 227 bits (579), Expect = 4.28e-72
Identity = 123/139 (88.49%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPK PRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKTPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

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BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match: XP_038897036.1 (fatty-acid-binding protein 1 [Benincasa hispida])

HSP 1 Score: 210 bits (535), Expect = 2.12e-65
Identity = 114/141 (80.85%), Postives = 123/141 (87.23%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAA--GGAAAAVGFVAAARNSTNPQTPFLEC 60
           MVSLRFPFSFPQPPKPPR +FLRPSYA A AA  GGAA AVGF+AA +N TNP +PFLE 
Sbjct: 1   MVSLRFPFSFPQPPKPPRHSFLRPSYAVAAAAVAGGAAVAVGFIAATKNWTNPHSPFLES 60

Query: 61  ALNLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGL 120
           ALN LFS+HSSPLWASLSLA+NSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGL
Sbjct: 61  ALNSLFSNHSSPLWASLSLADNSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGL 120

Query: 121 KNINVYAFGMLSHISTFEELL 139
           KNINVYAFG+ +     +E L
Sbjct: 121 KNINVYAFGVYADNDDIKESL 141

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BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match: A0A0A0KAH6 (Chalcone_isomerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G388440 PE=3 SV=1)

HSP 1 Score: 241 bits (615), Expect = 7.18e-78
Identity = 129/139 (92.81%), Postives = 132/139 (94.96%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

[Close]
BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match: A0A1S3BS31 (fatty-acid-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492668 PE=4 SV=1)

HSP 1 Score: 230 bits (587), Expect = 5.62e-74
Identity = 124/139 (89.21%), Postives = 128/139 (92.09%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

[Close]
BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match: A0A1S3BR98 (fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492668 PE=3 SV=1)

HSP 1 Score: 230 bits (587), Expect = 1.27e-73
Identity = 124/139 (89.21%), Postives = 128/139 (92.09%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPKPPRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKPPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

[Close]
BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match: A0A5A7VAP4 (Fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001720 PE=3 SV=1)

HSP 1 Score: 227 bits (579), Expect = 2.07e-72
Identity = 123/139 (88.49%), Postives = 127/139 (91.37%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPK PRR+FLRPSYA AVAAGGAAAAVGFV AARNSTNPQTPFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKTPRRSFLRPSYAVAVAAGGAAAAVGFVYAARNSTNPQTPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           NLLFS HSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN
Sbjct: 61  NLLFSDHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYAFG+ +     +E L
Sbjct: 121 INVYAFGVYADNDDIKESL 139

[Close]
BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match: A0A6J1H6I3 (fatty-acid-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460966 PE=3 SV=1)

HSP 1 Score: 196 bits (499), Expect = 2.63e-60
Identity = 109/139 (78.42%), Postives = 117/139 (84.17%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVSLRFPFSFPQPPK PR  FLRPSYA  VAAGGAAAA GFVA   NSTN Q+PFLE AL
Sbjct: 1   MVSLRFPFSFPQPPKLPRHGFLRPSYAV-VAAGGAAAAAGFVAVTINSTNQQSPFLESAL 60

Query: 61  NLLFSSHSSPLWASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGLKN 120
           N LF SHSSPLWASLSLA+NS  SSVVDSKTG SFPSVIGDSQQLLGIGLRRKAILG+KN
Sbjct: 61  NSLFRSHSSPLWASLSLADNSTTSSVVDSKTGMSFPSVIGDSQQLLGIGLRRKAILGVKN 120

Query: 121 INVYAFGMLSHISTFEELL 139
           INVYA+G+ +  +  +E L
Sbjct: 121 INVYAYGVYADNNDIKESL 138

[Close]
BLAST of Cucsat.G3286.T12 vs. TAIR 10
Match: AT3G63170.1 (Chalcone-flavanone isomerase family protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.4e-23
Identity = 71/141 (50.35%), Postives = 90/141 (63.83%), Query Frame = 0 

Query: 1   MVSLRFPFSFPQPPKPPRRTFLRPSYAAAVAAGGAAAAVGFVAAARNSTNPQTPFLECAL 60
           MVS RFPFSF QPP+           A AV+    AAA G   AA  S NP  P LE A 
Sbjct: 1   MVSFRFPFSFSQPPRATTSFSGFSISAVAVSVTVGAAAAGAAIAA--SRNPSHPILEWA- 60

Query: 61  NLLFSSHSSPL--WASLSLAENSAASSVVDSKTGFSFPSVIGDSQQLLGIGLRRKAILGL 120
              FSSH S L  W S++LA+     SVV+ KTGFSFP+ IGDS++LLG+GLR+K++LGL
Sbjct: 61  ---FSSHRSSLSPWGSITLAD----ESVVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGL 120

Query: 121 KNINVYAFGMLSHISTFEELL 140
           KNI+VYAFG+ +     ++L+
Sbjct: 121 KNIDVYAFGVYADCDDVKKLV 131

The following BLAST results are available for this feature:
BLAST of Cucsat.G3286.T12 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1X24.8e-2250.35Fatty-acid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=FAP1 PE=1 SV=1[more]
BLAST of Cucsat.G3286.T12 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146982.11.48e-7792.81fatty-acid-binding protein 1 [Cucumis sativus] >KGN44811.1 hypothetical protein ... [more]
XP_008451354.11.16e-7389.21PREDICTED: fatty-acid-binding protein 1 isoform X2 [Cucumis melo][more]
XP_008451353.12.62e-7389.21PREDICTED: fatty-acid-binding protein 1 isoform X1 [Cucumis melo][more]
KAA0064077.14.28e-7288.49fatty-acid-binding protein 1 isoform X1 [Cucumis melo var. makuwa] >TYK26236.1 f... [more]
XP_038897036.12.12e-6580.85fatty-acid-binding protein 1 [Benincasa hispida][more]
BLAST of Cucsat.G3286.T12 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAH67.18e-7892.81Chalcone_isomerase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7... [more]
A0A1S3BS315.62e-7489.21fatty-acid-binding protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492668 ... [more]
A0A1S3BR981.27e-7389.21fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492668 ... [more]
A0A5A7VAP42.07e-7288.49Fatty-acid-binding protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1H6I32.63e-6078.42fatty-acid-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460966 ... [more]
BLAST of Cucsat.G3286.T12 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G63170.13.4e-2350.35Chalcone-flavanone isomerase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016088Chalcone isomerase, 3-layer sandwichGENE3D3.50.70.10coord: 83..137
e-value: 2.3E-14
score: 55.6
IPR044228Fatty-acid-binding protein 1PANTHERPTHR47589FATTY-ACID-BINDING PROTEIN 1coord: 1..129
NoneNo IPR availablePANTHERPTHR47589:SF5FATTY-ACID-BINDING PROTEIN 1coord: 1..129
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..45
score: 8.102635

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G3286Cucsat.G3286gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3286.T12.E1Cucsat.G3286.T12.E1exon
Cucsat.G3286.T12.E2Cucsat.G3286.T12.E2exon
Cucsat.G3286.T12.E3Cucsat.G3286.T12.E3exon
Cucsat.G3286.T12.E4Cucsat.G3286.T12.E4exon
Cucsat.G3286.T12.E5Cucsat.G3286.T12.E5exon
Cucsat.G3286.T12.E6Cucsat.G3286.T12.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G3286.T12.C1Cucsat.G3286.T12.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G3286.T12Cucsat.G3286.T12-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0009813 flavonoid biosynthetic process
biological_process GO:0017196 N-terminal peptidyl-methionine acetylation
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031416 NatB complex
molecular_function GO:0005504 fatty acid binding
molecular_function GO:0016872 intramolecular lyase activity
molecular_function GO:0004596 peptide alpha-N-acetyltransferase activity