Cucsat.G2922.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGATTTGGATGTAAAACTTACGTTGGGTAAAAAGCCCAATTTGCAGCCCATCAAAAAATGGCGATTTCCATCGGCCTGCTTTCTCGGACCAGCGCCGTCTCAGTCAACGGAATCCCAGCTCAGTGGACGGAGGGCATTGGACGACGGGGAGCGCCATGGCTACCAAATCGGCGAAGCCTCCGAGGAAATCAGCCATTTCCAGCTACAGATATTGTCGAAATCCAAAGCTTGTATTTTCGTTATTTTTGTTACTGGCTGATGCCATCCTCGTCGCCCTCATCATTGCATTTGTCCCCTGTGAGATCGAATTCCTTTTCATTTCTGTTCTTTAAAATGAATTTTCGATATGCTCTTTTGACGCCATTGATTGTTTGGTTCCAGATACTAAAATTGATTGGGACGCTTACATGTCACAAGTAAGTCGTCTTTCTGGTAGTAGATATTTTGATCGACTCCAATTCCTGAGATAGTTAGCAATAACTATGAAATTACTGATTGTGATTATAGCAAAAGATGTTTAAGTTACAGATTAAGATTAAGTGTTTGAGAATTATGCCATCACTTTGCTACAAGTCAAGGATTTCTTGGACATTAATGGCTGTTTGTTTGATCTTGTACTATTAGTTTCAATATGGCCTTACCACTCTCTCTCTGGGAGGGTTTAATGGGTTTTACATCATGGTATTATTTTCAAGCAGGTAAGTGGATTTTTGGGAGGGGAGAGGGATTACAGCAATTTGCAAGGAGACACTGGACCTCTAGTTTATCCAGCTGGGTTTTTGTATATTTATTCTGCCATACAGTATGTCACTGGAGGAGAGGTATATCCAGCACAGGTAATAGTTTGCACTTATAGAGATCATGGAACTGTCAATTAAATTTGGGGAAAGAGAAACTGATATTTTGTTTCTTTTCAAAAGTTGTTTGTAAGAACTATAGTTTATGACTTGGGAAGATTAATGATACTATGTAAAAAAATACCATACTCTCTCACATGCAGAGAGGGATCAGTCGAGGTTACCATCCAAGAGCATTACTGCCATTTTCCAATGTACAACTGTAGTCGTAGGCAAGAAAAAAACACTAGAGCGAAGACATACATTTATTCATTAGAGTATTAAATAGAGGATACATATATTCTAACATATCCATTAATGAACTAGGTGCTGAATTGATATTACTACAAACCAAAATGGTCTTTTAATAACTTGTTCGATATGTTGGCAATGCAGATACAACAGATAATTTTACAGAAAGTATTTCAAACACTTCTTCACTACTTTTTGTTCTAAAAAAAATGTAATAATCTTTTTAAAATGTTTTTGAAATAAGTTGTTGCACCTTTTCTTTGCTGGTGAGGCTGCTCTCAAATCTCAGCATCTTCACTTCTGCCATATGTACTCAGAGAATACTGTTCTTGTTCCAAGTTGTAATAAACTTCTATTATTGCAGATTCTTTTTGGTGTCTTGTACATTATAAATCTGGGAATTGTTTTATTCATCTATGCAAAGACCGATGCGGTAAGCATTTATCTTCCTTTCTTTTTCTTGTTCTATTTCTTTTATGATGCAGAATATAAACTACGTTCCTTAATACAACTCAGTGGGCAACTCATTAGTTGTTACAGCCTCGACCTTATCTGAGGCTAACACTAATTGTGAGAAGAAAGTAGTAGCATATGTCCAAGTAGTAATTTTAGATGGCAAACAAGTAGTTTAATCTCATTTGAAGTTGTTCCATGCCAATTTGCTACATGGTCTTGCTTGATCAACCGTTTCTTTAGCTTTATTGACAGTGATAAGGGTATTTTACGGTTTCTTGTCAAATACTTAGTATTAGCTTTATTATATGTTTCTTTTTTGCACTAATCCGGATGTTGTTTAGAGTATTTTCTGATGACAAAAGACATTCTCCCATGTGCTTTGTGGTTAAAACTGGATTTTTGTAGCCCATCATGGGTTGATCTAGTGGCAAAAAGGGAGATATAATCTCAATAACTAACTAAGAGGTCATGGGTTCAATCCATGATGGCCACCTATCTAGGAATTAATTTTCTACTAGTTTTCTTGATACTCAAATGTTGTAAGGTCAGGTGGCCTTTGCCTTGTAAAATCATTCAACACTGGCCTTTGCCTTGCCGTTGGAATCTTTACTCCCTCTTCATCTTGGCCTGCTTGTTTGGGTTGGAGATGTAGAACGTCTTTGCTATTTTTTTAATATTTTCAAATCCTTTCAAATTGACTGTCTTCCAGCTTCCGTTCTGGTCTTTTTGCTTACTCTCCCTCTCCAAACGAGTGCACTCCATCTTTATGCTCCGTCTATTCAATGACTGCTTTGCCATGACTCTTCTCCATGCTGCATTGGCCTTATTTCTTTTACGAAGGTGGAACCTTGGATTGATCATCTTCAGGTATCAATATCTACGTTGTTTCATCTTAGTTTTTATGTTACCGATTTTAACTGTTTAATTATCTATTTATGTAGTTTTGCGGTTTCTATAAAGATGAACATTCTTCTGTATGCTCCACCTTTATTACTTTTGATGTTAAAGGTAGTTTTTATTACCATTTCATGGTTTACTTACCTTAATTTCCAAATTTATTCCTGTTTGAATTATTTGTTAGTTGTTAAGATACTTCAATCTATTTGACAGGCTCTAAATATTGGTGGAGTGATAACAGCTTTAGCTGGGGCTGCTCTTGTGCAGGTGCTTTGTTTCCTATTTTAATTTTAAATGTCAGCAACTGACTATCTTCTGGGTTAAAAGGGCTCTTAATCTTGGACTCGTTTATGACATTTCTTGACATATTATTATTAATTTCACCTTAAAATTTGTTTTATAGTGCTCTCATGTTTGCCATGAGTTGCTACTAGCTTGATGTACAGAGTCTGTATTTCTATAAGGGGCGAGGTTTAGTTTTTAAATCGCTATTTCCATCATTGAGGATGCTTTGTCATCTTTTTATACTTGCTTGTTCGTCGGTTTTGCAGATTCTTTTGGCACTTCCTTTTATAGTTTCACATCCATTTGCATACGTATCAAGAGCTTTTAATCTTGGGCGCGTCTTCATCCACTTTTGGTACATCTAACTGTACTTCAAAGCCCTGCTCATTTTGAAGAACATCTTATACCTGTATTTATTAGCTATTTTCTAAATGGTACAATATAGTTGATTTAAGAGAAACTTCTTGCGTTGGATTGTCTTTATTTGTAATATTGTTTCTTCAATTCAAAGTGCTTGTGCTTTGGTGTATTAGGTCCGTTAACTTCAAGTTCGTCCCCGAACCAATTTTTGTGTCGAAGCAGTTTGCTGCTTTGTTGCTGATTACTCACCTAATATTGTTGGCAGTTTTTGCTCATTACAAGTGGTGCAAGTAAGTGCTTTACCTTTAAGTAACTGACAATAAAGTAGAAACTGATGTTACTATGGTGATAATATTCTATTATGAGACTGATAGGAGGGGAAGATTTACAGAGAAAACACCGGTAATGAATTTTATGATAATCTCGTTTTTGGAAATTTGATGTCTAATTGTAAAGACAAAAATTTGATGTTTTTTCCCTTTAGGTTTATATATTTATTTATCTTTTTTAGTACGGAGAGAATTTGTATCACAAACCTGTTGATCTTTAAGACATACTTTATTCTAGTTGAGTTATACTCATCTTTTATTGGTTGGTAAATGTTGTCAATCTATGAGTGCCACGTTTCCGGTTATGAGTCTTAATGACTACACTAGTTTATCTTCTGGATTATGTGCCGCACCATTAATATTTGATATTTGTTCACTTTCTTCCAGGCATGAAGGTGGGATTTTCAAATTCATCCATTCACAATTTCTCTCCATCAAACTTAGATTGGCTCTTGTCAGTTCTTTTCCCAAGCCGACGTCTAAGAATGACAAGCCATCCTTCAAGTTACTCACGGAAGAACGTAAGTTGGCAGTAAAACGATATTTGATGTAAATTTTAATATGATGATTTGTCTTATAAATTTCATATAGTCTTTTTTTGGTGTCTAATACCCTTCTCGTCATTTTCTCTGGTTGATTTCTTTGGCTCAGATGTTGTAACAACCATGTTTGTTGGGAATTTCATCGGAATTCTGTGTGCTAGATCATTGCATTATCAGTTCTACTCATGGTAAGCTCAAGTAACTCAAGTTCTTAACAATTAATGGAAAAAGGATGAATCATATCAAACCACTTTTTGACGGCTACATCTCATATTCTAATGTCTCCGTTTGGGCACGATCCATGACTAAGTTTTTATGACATTACTTGTGAGGTTTTATTTTATTAGATTATCTCACACTCTCATGAACACACCATTTTGTCCTCAAGCAGTGGTGTCTAAAATTTCATCCGTATAATATCTAATTCTCATGATCATATAATTCATCAGACCTGAAGTATTGTGGAATCGGCTCTAAACATCAGATTTCATTATGCTGCAGGTACTTCTTCTCGATTCCATATCTGTTGTGGAGGACATCGTTCCCTACATTATTACGGTACCTTGCTGAATACCTCATCTTTCTTGTCCGAATTAATTTGAGCACATACTTAATTATTATATATCGTTATCATTTCTCGTATTTGTTTTTTATTTTGTTGTTTTTGGTTTCTTTCTTTTGCAGTTTGCTTGTGTTTGCAGGGATAGAGTTTTGTTGGAATGTCTATCCTTCTAATATGTACTCCTCCATCTTGCTTCTAAGTCTTCACCTACTTTTGCTTTGGGGTTTGTGGTCTGGTCCAGCAGAGTATCCTTATGTTCGCAGTGAAGCATTAGACAGAAAACAAAAATGAAAAACACAAACACCTCCTTCTTCCTTCTTCCTCTTGCAGATGGGTCTTGGATAATATCGTAAGACAACGGGTCAACTTCAGGTTGTCGAGCATCAAATTTGAGGCTGATTTAGGTTAAGTATTTGAACACACCCTTGAAAGCTGCTGTTGTCTTTACTCTTGTTTTTTGTAGGTTCACTCTATATTATTAATCATAGTGCTGCTAAATGAAAGAAAAACCATAACTTACACAGTTGTGCTTGGGGTTTTTGAGTTCAACATGAAATTGTTGCAATTTGAATTTGAAAGTTCCAAGATTCCAAGAATTGATATCTTAAGTGAGTAAAGCTTTCTAACATAATGTTGGTTTTGGAGACATTATGTAC ATGAGTGCCACGTTTCCGGTTATGAGTCTTAATGACTACACTAGTTTATCTTCTGGATTATGTGCCGCACCATTAATATTTGATATTTGTTCACTTTCTTCCAGGCATGAAGGTGGGATTTTCAAATTCATCCATTCACAATTTCTCTCCATCAAACTTAGATTGGCTCTTGTCAGTTCTTTTCCCAAGCCGACGTCTAAGAATGACAAGCCATCCTTCAAGTTACTCACGGAAGAACATGTTGTAACAACCATGTTTGTTGGGAATTTCATCGGAATTCTGTGTGCTAGATCATTGCATTATCAGTTCTACTCATGGTACTTCTTCTCGATTCCATATCTGTTGTGGAGGACATCGTTCCCTACATTATTACGTTTGCTTGTGTTTGCAGGGATAGAGTTTTGTTGGAATGTCTATCCTTCTAATATGTACTCCTCCATCTTGCTTCTAAGTCTTCACCTACTTTTGCTTTGGGGTTTGTGGTCTGGTCCAGCAGAGTATCCTTATGTTCGCAGTGAAGCATTAGACAGAAAACAAAAATGA MSATFPVMSLNDYTSLSSGLCAAPLIFDICSLSSRHEGGIFKFIHSQFLSIKLRLALVSSFPKPTSKNDKPSFKLLTEEHVVTTMFVGNFIGILCARSLHYQFYSWYFFSIPYLLWRTSFPTLLRLLVFAGIEFCWNVYPSNMYSSILLLSLHLLLLWGLWSGPAEYPYVRSEALDRKQK Homology
BLAST of Cucsat.G2922.T4 vs. ExPASy Swiss-Prot
Match: O82244 (Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Arabidopsis thaliana OX=3702 GN=ALG3 PE=1 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 9.6e-39 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy Swiss-Prot
Match: Q92685 (Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Homo sapiens OX=9606 GN=ALG3 PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 6.5e-19 Identity = 52/116 (44.83%), Postives = 67/116 (57.76%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy Swiss-Prot
Match: Q24332 (Lethal(2)neighbour of Tid protein OS=Drosophila virilis OX=7244 GN=l(2)not PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-18 Identity = 44/75 (58.67%), Postives = 54/75 (72.00%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy Swiss-Prot
Match: Q8K2A8 (Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Mus musculus OX=10090 GN=Alg3 PE=1 SV=2) HSP 1 Score: 93.6 bits (231), Expect = 2.5e-18 Identity = 51/109 (46.79%), Postives = 62/109 (56.88%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy Swiss-Prot
Match: Q27333 (Lethal(2)neighbour of tid protein OS=Drosophila melanogaster OX=7227 GN=l(2)not PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 3.9e-16 Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. NCBI nr
Match: XP_004136038.2 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Cucumis sativus] >KAE8646336.1 hypothetical protein Csa_016914 [Cucumis sativus]) HSP 1 Score: 300 bits (768), Expect = 5.24e-98 Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. NCBI nr
Match: XP_008451601.1 (PREDICTED: dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Cucumis melo] >TYK18118.1 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 283 bits (725), Expect = 1.64e-91 Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. NCBI nr
Match: KAA0068009.1 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Cucumis melo var. makuwa]) HSP 1 Score: 283 bits (725), Expect = 1.74e-91 Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. NCBI nr
Match: XP_038900011.1 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Benincasa hispida]) HSP 1 Score: 271 bits (693), Expect = 1.05e-86 Identity = 129/146 (88.36%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. NCBI nr
Match: XP_022153296.1 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase [Momordica charantia]) HSP 1 Score: 244 bits (622), Expect = 5.46e-76 Identity = 119/146 (81.51%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy TrEMBL
Match: A0A0A0K5C5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396360 PE=4 SV=1) HSP 1 Score: 300 bits (768), Expect = 1.10e-97 Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy TrEMBL
Match: A0A5D3D395 (Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00460 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 7.96e-92 Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy TrEMBL
Match: A0A1S3BRU4 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Cucumis melo OX=3656 GN=LOC103492832 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 7.96e-92 Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy TrEMBL
Match: A0A5A7VSB0 (Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G002000 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 8.44e-92 Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. ExPASy TrEMBL
Match: A0A6J1DK78 (dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase OS=Momordica charantia OX=3673 GN=LOC111020823 PE=4 SV=1) HSP 1 Score: 244 bits (622), Expect = 2.64e-76 Identity = 119/146 (81.51%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. TAIR 10
Match: AT2G47760.1 (asparagine-linked glycosylation 3 ) HSP 1 Score: 161.4 bits (407), Expect = 6.8e-40 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. TAIR 10
Match: AT2G47760.2 (asparagine-linked glycosylation 3 ) HSP 1 Score: 161.4 bits (407), Expect = 6.8e-40 Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 0
BLAST of Cucsat.G2922.T4 vs. TAIR 10
Match: AT2G47760.3 (asparagine-linked glycosylation 3 ) HSP 1 Score: 106.3 bits (264), Expect = 2.6e-23 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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