Cucsat.G2820.T8 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G2820.T8
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionEPIDERMAL PATTERNING FACTOR-like protein 9
Locationctg1041: 2937952 .. 2945647 (-)
RNA-Seq ExpressionCucsat.G2820.T8
SyntenyCucsat.G2820.T8
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATTATTATTGTTTCCTTCAAAAACCTTCTCTTCTCTTTTTCTTTTCTCTTATCCTCTCTTTTCCAATGGCAAAAGCTGCAAAACCACTTTCAGTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAACCCTATTTATTACCTCTCTTTTCTCAACAATGGCAGTGCAAGGTCCCTCTCCCTCTTATCTCTTTCTCTTTTTCTCCTCATTCATCTTCTCACCTTTTTCACTCACATGACCTTTTTCTTCTCTTTTTTTGGTTCCAGGATTCTCCACTCGAGATCGGCCAGTACCCCAATTCTCTTCTCTACAACCAACAATACTCCCACTCGAGGTTAGTCGCATTAGCCAAATAATCTCGTTTTTTTCTACCCTATATATTTCACATGAACAATACTGTTTTTCGAATTCTACCTTTAGTTTAATAATGTTATTGTTAATTTCTTTTTACTTCTACTAGTTTTGTTTTTGTGTTGGTATTGATTTAATTTTGTGTGTCATTTTCATTCAAATTTGAAATTTAAACTATAGTTTTTGGTGTAACTATCTTTTGTTTGGATTAACCTTTTTTTTTTTTTTTTTAATTTATAAAAACAACTTATAGTGATTTTAATTCATGTTTTTAAATTACCCATTGATATAGGGGCTTTTTTATGTTTCTTTTTCTAATTAATAAAAATTTATATGAACGGTTGTTTCAATCTATATTTATAAAATAAGAGTTAACCAAAATATAATGAAATAAGCATAAAAAAAATTCAAAACTAGAATCTTGAATTCACTTTTATAGTGTAATTTATTTTACCTTTTTTCTATATATATATAAAAAGAAAAGTAAAATAATATATTTTATTTTCATATATATAGAAACTTGAAAAACTTGTCTTTATAAAAGCTTTATTATATTAAGTTTCAACTTTCATTTCACAAACTACTTTAATCTCTATATACACATGCTCCAATTTTTAGATAGGAGAAAGAGAAATATATATATATATATATATATATATAATATATATATATATATATATATATATATAATATATATATATATATGTTTTAACATTTTTAGTTAACATATATTATTATTTTTGGTCACTCTCATACAATCATCATAATTGAAAGAAAATGGAGGTATGAATGATAAGAGAAAGCAAATTGAAATGAAGGAGGAGTAGTAGTAATTAAAGAGCTAATTTAGAAGTGTTATATTTATGGAGTTTAGGGTAGAAAAGAAAGGTTGAGGAAATGGAGAAGGGTGATGATTGGTTCAACAGCACCAACATGTACTTACAATGAATGTAGAGGATGCAAATACAAATGTAGAGCTGAGCAAGTTCCTGTTGAAGGCAATGACCCAATTAATAGTGCTTATCACTATAGATGTGTTTGTCATAGGTAATTTCTTCATTACTTTTATATTTCAATCCTCTTCCAAATTTTGCTCTCTGCTTTTTCTCTTAATGTCTAATCTTTTTTTTCTTTTTCTCAAATTCATTCTTTTTCTTTAAACTCTTCTTCTTCTTATTGTTATTGTAATTGTAAGTCACTTGAACTTATAAATATATATATATATATTTTTCTTTGAATGGTGTATTTTGGTTCAAGAGATATATATTCTTAGAATATATCATATTTTTAAACATTTAGAATGCACATCTCAAACACCAAACACTCTAAACACTCTATATTGTATAGTTATGAATAAAAGAGAATGAGAGAGAAAAATTAGTGAAAAGGATCAAATTTTCATTTAATTGTTTCTTATTTGAAAGGAATCTCTTAAATTCACTCTTGAAAACTCAAGAACACTAAAATGGTTAAATTGGATGTGAAAATAGTGAGTCTATATGCATATTTTTTGAAGATGAAGACAAAAAATCAAATGGTTATCAAACGGAGCCTAAATATACATATTTTTCTAAACTTGAAAACGATACAAAACAAAGTTAAGCTAAGATAGAATTAAAGTAATTGAAAAGTAGAAATGTTGTTGGAATGGAAGGGTCGATGAGGATGAATTTGCGAAAATGAAAGAAGGGGTTGATGGATATGGAGAGAGTACTAATTCACATGCCTTTAATACACAAAGGACACTTTGGGTTTGTCCCACACATTCACTCAATACTCACTCCAGTCAAATCAGATACCCTCTTCCCTCTTACCCCTTCTTCTCCCTTCTCTCTCATTTCCTTTTATTTGTTTTTTGTCTCCACTTTTTTATTTCTTTTTCTCTTAAATCATACCTACATCTATTTTTATCACTATTTAAAATCACACTTATTCTAATCTATCCAAATATTACGTTTAGATACTCGTTTCAACTCATTTTGTTTAAATTTCACTTAAACTCTATTCCATTGTTTTCACTTTTTATGATTTTTTTTGTTGGTTTTATAAAAATGATGTCTTAACATCGATATCGAAAAAACTCATATTTAAAGTTAAGTCTATCATTGGCTATCAATGTCATTGATAGAATAATATATCATCGACTATTAAAAGTTTGTTATTGATAGAATCTAAAATTTTGTATAGTTTTGTAAATATTTTATTAAATTTTCTATTTTTTTACCATTCTCCTAAATTAAATATTATCAACTATGTATTTCGTTTTATTACGTTATATTAGAGTTGTTTTATTTTTTCTAAAAACAAGATATTTAAATTTAAATTTAAATTTAAATAAGTATTTATTTTATAAAAAACCTTAAATTATTTTGAGAAATTCAAATTAATATAAACGAAGTTGAACTTATATTAAATTAACTATAAACTATGAGCAATTTTAGATATTCTCACGTAAAAATTATCGGTAAAACAAACATAATTATCTAAATATTACTTGATCTTTTTACCGTTATTCCTACAAAACAAACATGGTTATCTAAGAATGACAGATACTTGTGATTATAGTTTTTAGACGTTTAAATATTTTATCAATATTCTTGAAAATAAACCGCCTTTACAAGTAATATTTTAGTCGGTAAGTATGAGTTTATGTAAATTTTTCGAGTTTTTTTGTAGTATATGACTTTAAATAGCACATAATTTACTATTACATCATGAAAAAAAGAAAACCAAGAATTAAAACTGGCTGTAAAAGTCTCAATCATAACTATTGAAAATTCAAAAGCAAAGTTAACTTTCTTTAGTCAAATTGTTGTCTTACACGATACATCCATTCGATTTGAATGAGATTGGTATTTAAGTTTACTCTTTCCTTTGCTTAAAGAAAACATTGTTAATCTTTTCATTAAAATGCTACTAATCTATGGGAGATTGTTAGAATGACTTGTAATTGTAATCACTTCTACTTTTTAATTGTTATCATTTTAATTTTGAAGTTTGAAAATTATGTTTACAAATAATGTGAGTGTTTGATGACTACAATTCTAATGTTTAATTCTCCCTATTTTTTCATTTATTTGATTTTCTATAAGCTAGCGTACGTATGAAATCAAAGGTTGTGTAAATCTTGAAAAGTAACTAGTGACTACAATTTAGCACTGAAATCGATTTTGTTTTCATGACAACGAATCTTCTACAACACGAACAACAATTAAGATCTACACATTTAACAGCGAATAACAAAAATTGTCCTTGCAATTTGAGTGCATCGATAATTTTGAACTCCAACCTAACAACAAAATCAAATGTTATATGATACTTGATAGTTGTCTATATCTTTCGTTTTTCTTCCTCTACCTTCATTTTGACAACTTTAAAAACCAGATCTATATTTTCTTTTCTAATATAATAAACCTTTTACCTTAATCAATTTTTGTCAAAATTTGAGTTGCTACATTCATGGAATGATACCAACACCAACATTTTAAACCTTAATTTATGTGTTATAGCTTTATGTAAGAAGATTTGCCTGCTCAAAACGAGAACTCAAGTAAGAAATTTTAGATTTTTTAGGAAAATTTTAGATAACTTAAGAGAGGATTTTTAGATTTTTTGAAGGATAATTTTGGACTTGAGAGCCAGGAAAGAAGTTAAGCTTTTGGTCTTAGAAAAGGCAAAGAAAAAAAATACTTAAAAATCCTACAAACTCAATAAAATAGTCAGGTCAAGTTGTCTCAAAAAGTGTTGTAGCCTTCAAAAAAATATCTTACGTTTAACCCAAAAAAATGTATAAATGCTATAAAGCAATGAAACAAAATAGAATCTAAAGGATGAGTGAAGACTTGAAGGAGAGATTAATATCCAAAGGGCTAAAAGTCACAGTACACAATCATCTCACATATATACGAAAGCAAACTTGGGATTTTCCCACCATTTCCTTGGAGTGGTAACTGGGAATAGAATGAGAATTGGTGAATTTTAACAATGGTGGAAAAACTGAATCCATTGCTGAAATAGCAATCATCTTGCTTACATTTTTGTACCACTTGAGGCTTAAGCATCATTTGTCAGTTCTTGATCTGCAATGTAAACAACCATTAGGACTTTTGAACAATGAATAAAGTAACCAACCATTTTGTTTTATTCTACTTAAATCACATTTTAGTTTACGAACTTTCGAGCTTATTTCATGTTGATCCATGCGATAGCACGGGCTTTAAGTCACATAACCTGACTAAGCCAAGTATTGGAAGGGTAAATACAAAGTAGAAAACTAATAGGTAACTCAAGTGAAAGTCTCCATGAATCCATACCTTGCTCAAGTACTTCTTATGTAATTTCAGTGCCTCATTACACGCTTTTTTGGCATCCAGATTTCCAGTTACATCACCCAAGATCTAGAGCCAAAATCATGGATCAAACATTAAAAAGAAATATCCACAATAATTCTATCATGAATGGTAAGATACAATGAGAGGGAAAAAGAAAAGAGAGGTACATCCTACTTACGTTTACAACATCATCCAAACCTTTGGCTTCCTTGAGAATTCGCTTATTCTTGGTCTCAAGAACACTTGCAACTAGAAAAACTGGAAGTGGAAGCTGCTGGTCATTGGATCCCATCTTCACATTTTTCCTCTCAAATTTGCCAAATTGTTTTAGGTGTTTGTCGTTCCCACTGGTTCCTGCTCCTCCCTTTGAAGCAGATCCTGACTCATAGGATAAGAACATATTTGGATTGTATTCCATGGCCCACATCATCTGAAACCAGTCTATATTACTGTATCAGTTAAACAAATTTTAATATATACATACCAAAAATATGGCTAATGTCAAACATTCAGGAATTTTTACAATTTAGTCCACATCCATATTTATCAAAAAGTTCATTTGATCCCTTACTTTAATATTTTACAATTAATGCCCATTTCAGTTAGTAAATGTTAATATTAGTCAACGATAAACTAATACGACGTGACATTGACCGAGTTGGTTGATATTTAGAGGAAATATTCAACTACTTATTTTGAATTCCTTTTTGCAGAGTTTTTAAGAAATTAACAGACATTTTCACTTTTCTTTCCTCATGTGGCCTAGTTCTTCCTCTAAATTTTTACCAAGTATTACCATGTAAGCTTTTAATATATGTTAATTTTAACGCTCACCAACAAGAAAAGTGTAATTAGAAGATAAGAGACTAAAGGAAACTTTTCAAACAATAGGGACTATACCTAAACACCCTAAGGATTCAACAGTATATTTAGCCTAAACACAGACAACACTTAGTAATACAGAGCTCCTCCAGTTTTTTAAATGAGGCTGTAAGTTTGAAAGGTTAAATAAAATTTGGGTAACATTTATTCAGTACTTATAGCCACCACTTTTTATTTTGTTTTCAACAGGTCAGTTTTCATTTAAAGAAATTGTAAAGTTAATAGTTTTGAAAAAAAAAATTGTTTGGTATCAATCTGCAAATTATTATTTAAAATTCAATCAATGTAGCAAGAAAAGTACAACAATTATAAAAAATGCTTGATAACCAAAAGTACAACAATTATAAAAAATGCTTGATAACCAAAAGTTCAATACTAGATATGGGTAAGTAAAAGAGAAAAATGATTTATTGTTATTAATATTTGGTTTAATTTAAAATGATTTTAGAGTGGAAGAGATCCAAGAGGAAGAGTTCGGTCGTAAAGTTTAATTTGGAGAAGACATATAATAACATTGGTTTGGATTCCTAGTTGGATGTCTCAACACCTATCTAATCTAGTAAAGATTGTAGATTGTCTAACTAGGAATAAGGAAGTGGTCATCCATCCTGAAGAGATTAATTCAGGGAGAAATTGGTGAATTATCAGCACTGTATGTCAAATACAAGGCTTCTAGGGTTACTAAATCTAAAACACAGTAATAGATAATAGAAGTATATTTATGAGGCTTAAGAAAGGTGATCCTTTTTCTCCTTTACTTGTTGTTTTCCTATGAGAGATGTAACAAAGATTTTATTGAAGGATTCTGCTAAAACTAGGATTCATATTTTCTCATTTTCAATTAGTGAATGTCACAATATTGTTTTGCAACGATGGTCTCAAGAAAAACTTGAAATACGTTTAGAGGCCTTAAGATTGAAGGGTGGGTCTACTAGGATAAATCAGTGATTTATGGAAGAATGATTTAAGGACCTCTCCACTTAATTTATTTTCCTGAAAATGGCAAACTCTAATAAAATTTTGAATAAAGAATTCCCTTTGGTGATTTCTTTTCTCAAAAAGAATGCTCATAGTTATCAGGCAGAGATTGGAAAGAAACAATAGAATACATGACAAGAAATCAAGAACAAGTCTCAGGAACCAGGGCCAAACTCGGTGTATTTACAAAAAGGAGACATAACCTCAATAAATAACTAAGAGGTCCTCGGTTCAATCTAGTGGCCACCTGCCTAAGAGTTAATTTTCTTGAGGTTTCCTTGACAACTAAATGTTTTAGGGTTAGAAGGATTGTCCTATGTGATTAGTCAAGGTGTGCATAAGCTGGCCCAAACACTCATGGATATACAAAAAAAATAAAATAAAAATTAGTGTGCTTATTTATTCTTTTAAATTCGAGGTTTTGACTTTATAACATGTCTATAATCAATCTAGATTGGGTTCACACTACAGGCTGGCATACCAAACGTTGAGGTGGTAATGGAACAGGGAGGAAATGAGTTCAAGCTCCATGGCAGAGATCTATCTAAGACATTAAAATCCCATGAAGTTGTTGACAATCAGATTTTGTAGTAATATGCGATAGCGTGTAGCTAAGCGCACATAGCACTTTAATATGTTTGCTCTTGTAGTAGACACGACACGTCTTCACTATTTCAATTATTGGTTTCCTTTTATTTCTAAAGAATATTATCTCATTATTAATTAGTCCCAACAAATGTTTTTCAGGATTACATGTTACAGCATTTCACATCAAGAAGTCCAGACCACATCTCCTACCAAGCTCATCAAATAATAACTCTTTACCTCCCAAAGATATAAACTGTCCACAAAGGAGAACTCTCTGCGAAAAAGCACCATCAACATCCGAAATGCAAACAAATACTCTCCACCATCTAACTCCTCTGCAAATATGAAAGTATAATCTGCTGTGACACAATCTTTAAAATCAAACTTCAAACCCAAAAAGAACCACGAAAAGTGAGAGTAGTACGGACAAAAATATTGTGAGTAATGTGAAATTAATATTTGGTATTTTATGAGAAATACGTATATGTTGTATTTTAATTCAACTCTCAAATCAACTTTTGGAAAAGAATGCATTGAGCTGAATAAAAGCTTTCCAAAAAACC

Coding sequence (CDS)

CATTATTATTGTTTCCTTCAAAAACCTTCTCTTCTCTTTTTCTTTTCTCTTATCCTCTCTTTTCCAATGGCAAAAGCTGCAAAACCACTTTCAGTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAACCCTATTTATTACCTCTCTTTTCTCAACAATGGCAGTGCAAGGATTCTCCACTCGAGATCGGCCAGTACCCCAATTCTCTTCTCTACAACCAACAATACTCCCACTCGAGGGTAGAAAAGAAAGGTTGAGGAAATGGAGAAGGGTGATGATTGGTTCAACAGCACCAACATGTACTTACAATGAATGTAGAGGATGCAAATACAAATGTAGAGCTGAGCAAGTTCCTGTTGAAGGCAATGACCCAATTAATAGTGCTTATCACTATAGATGTGTTTGTCATAGATTGGGTTCACACTACAGGCTGGCATACCAAACGTTGAGGTGGTAA

Protein sequence

HYYCFLQKPSLLFFFSLILSFPMAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSHYRLAYQTLRW
Homology
[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy Swiss-Prot
Match: Q9SV72 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EPFL9 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = 0 

Query: 28  KPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLR 87
           KP  + +  LL  LLL  ++            ++R R +    SL P +  L  R     
Sbjct: 9   KPRCITIFFLLFALLLGNYVVQ----------ASRPRSIENTVSLLPQVHLLNSR----- 68

Query: 88  KWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR 139
             RR MIGSTAPTCTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Sbjct: 69  --RRHMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR 102

[Close]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match: XP_031745007.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Cucumis sativus])

HSP 1 Score: 258 bits (658), Expect = 4.24e-86
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 82
           MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR
Sbjct: 1   MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 60

Query: 83  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSH 142
           KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSH
Sbjct: 61  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSH 120

Query: 143 YRLAYQTLRW 152
           YRLAYQTLRW
Sbjct: 121 YRLAYQTLRW 130

[Close]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match: XP_031745008.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X3 [Cucumis sativus])

HSP 1 Score: 239 bits (609), Expect = 1.03e-78
Identity = 124/130 (95.38%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 82
           MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR
Sbjct: 1   MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 60

Query: 83  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSH 142
           KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRL   
Sbjct: 61  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRL--- 120

Query: 143 YRLAYQTLRW 152
              AYQTLRW
Sbjct: 121 ---AYQTLRW 124

[Close]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match: XP_031745006.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X1 [Cucumis sativus] >KAE8646265.1 hypothetical protein Csa_016835 [Cucumis sativus])

HSP 1 Score: 229 bits (585), Expect = 7.19e-75
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 82
           MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR
Sbjct: 1   MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 60

Query: 83  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRLGSH 142
           KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR+   
Sbjct: 61  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHRITC- 120

Query: 143 YRLAYQTLR 151
           Y +++Q ++
Sbjct: 121 YSISHQEVQ 128

[Close]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match: XP_038899071.1 (EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida])

HSP 1 Score: 163 bits (413), Expect = 4.30e-49
Identity = 89/116 (76.72%), Postives = 95/116 (81.90%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGR 82
           MAKAAKP+SVLLLLL      TL +T LFSTMAVQGFSTR  P  QF SLQ TI   EG+
Sbjct: 1   MAKAAKPVSVLLLLL------TLIMTFLFSTMAVQGFSTRHPP--QFFSLQATIAS-EGK 60

Query: 83  KERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR 138
            E++R  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR
Sbjct: 61  NEKMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR 107

[Close]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match: KAG6593029.1 (EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 148 bits (374), Expect = 3.92e-43
Identity = 84/121 (69.42%), Postives = 92/121 (76.03%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQG-FSTRD----RPVPQFSSLQPTIL 82
           MAKAAKPL      LLLLLLL L + SL STMA++G FST D    +P+PQF S+Q TI 
Sbjct: 1   MAKAAKPL------LLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIA 60

Query: 83  PLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 138
           P       +R  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH
Sbjct: 61  P------EMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 109

[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match: A0A0A0KA17 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucumis sativus OX=3659 GN=Csa_7G368090 PE=4 SV=1)

HSP 1 Score: 186 bits (473), Expect = 7.69e-59
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 54  MAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKC 113
           MAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKC
Sbjct: 1   MAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKC 60

Query: 114 RAEQVPVEGNDPINSAYHYRCVCHR 138
           RAEQVPVEGNDPINSAYHYRCVCHR
Sbjct: 61  RAEQVPVEGNDPINSAYHYRCVCHR 85

[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match: A0A6J1H996 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC111460784 PE=4 SV=1)

HSP 1 Score: 147 bits (371), Expect = 5.59e-43
Identity = 84/121 (69.42%), Postives = 92/121 (76.03%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQG-FSTRD----RPVPQFSSLQPTIL 82
           MAKAAKPL     L LLLLLL L + SL STMA++G FST D    +P+PQF S+Q TI 
Sbjct: 1   MAKAAKPL-----LRLLLLLLALILCSLCSTMALKGRFSTEDELFAKPLPQFRSVQTTIA 60

Query: 83  PLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 138
           P       +R  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH
Sbjct: 61  P------EMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 110

[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match: A0A6J1KTW3 (EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111497591 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 8.65e-42
Identity = 82/121 (67.77%), Postives = 90/121 (74.38%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQG-FSTRD----RPVPQFSSLQPTIL 82
           MAKAAKPL       LLLLLL L + SL STMA++G FST D    + +PQF S+Q TI 
Sbjct: 1   MAKAAKPL-------LLLLLLALILCSLCSTMALKGRFSTEDDVFAKSLPQFRSVQTTIA 60

Query: 83  PLEGRKERLRKWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 138
           P       +R  RR+MIGSTAP CTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH
Sbjct: 61  P------EMRNSRRLMIGSTAPICTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCH 108

[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match: A0A6J1DR94 (uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023601 PE=4 SV=1)

HSP 1 Score: 136 bits (342), Expect = 1.61e-38
Identity = 77/125 (61.60%), Postives = 90/125 (72.00%), Query Frame = 0 

Query: 23  MAKAAKPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPV-------PQFSSLQPT 82
           MAKAAKP SVLLLLL           +L   +AVQGF+T +  +       PQFSS+  +
Sbjct: 1   MAKAAKPASVLLLLL-----------TLIIVVAVQGFTTGEDELLLAKALPPQFSSV--S 60

Query: 83  ILPLEGRKERLR--KWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYR 138
            +  +G+ + LR  + RR+MIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYR
Sbjct: 61  TMANQGKNKMLRNSRTRRLMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYR 112

[Close]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match: A0A2R6P6P2 (Stomagen like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31935 PE=4 SV=1)

HSP 1 Score: 123 bits (309), Expect = 1.55e-33
Identity = 66/104 (63.46%), Postives = 72/104 (69.23%), Query Frame = 0 

Query: 42  LLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQ-----PTILPLEGRKERL--RKWRRVMI 101
           LL LF T +F+   +QG S     VP   SL+      T LP  G  E    R  RR+MI
Sbjct: 9   LLLLFFTIIFAAHVIQGSSRTPFSVPSIESLRRSSASETELPQPGGFEPWVSRNSRRLMI 68

Query: 102 GSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR 138
           GSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHY+CVCHR
Sbjct: 69  GSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYKCVCHR 112

[Close]
BLAST of Cucsat.G2820.T8 vs. TAIR 10
Match: AT4G12970.1 (stomagen )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 61/111 (54.95%), Postives = 70/111 (63.06%), Query Frame = 0 

Query: 28  KPLSVLLLLLLLLLLLTLFITSLFSTMAVQGFSTRDRPVPQFSSLQPTILPLEGRKERLR 87
           KP  + +  LL  LLL  ++            ++R R +    SL P +  L  R     
Sbjct: 9   KPRCITIFFLLFALLLGNYVVQ----------ASRPRSIENTVSLLPQVHLLNSR----- 68

Query: 88  KWRRVMIGSTAPTCTYNECRGCKYKCRAEQVPVEGNDPINSAYHYRCVCHR 139
             RR MIGSTAPTCTYNECRGC+YKCRAEQVPVEGNDPINSAYHYRCVCHR
Sbjct: 69  --RRHMIGSTAPTCTYNECRGCRYKCRAEQVPVEGNDPINSAYHYRCVCHR 102

The following BLAST results are available for this feature:
BLAST of Cucsat.G2820.T8 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SV721.6e-2354.95EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Arabidopsis thaliana OX=3702 GN=EP... [more]
BLAST of Cucsat.G2820.T8 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031745007.14.24e-86100.00EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X2 [Cucumis sativus][more]
XP_031745008.11.03e-7895.38EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X3 [Cucumis sativus][more]
XP_031745006.17.19e-7591.47EPIDERMAL PATTERNING FACTOR-like protein 9 isoform X1 [Cucumis sativus] >KAE8646... [more]
XP_038899071.14.30e-4976.72EPIDERMAL PATTERNING FACTOR-like protein 9 [Benincasa hispida][more]
KAG6593029.13.92e-4369.42EPIDERMAL PATTERNING FACTOR-like protein 9, partial [Cucurbita argyrosperma subs... [more]
BLAST of Cucsat.G2820.T8 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KA177.69e-59100.00EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucumis sativus OX=3659 GN=Csa_7G3... [more]
A0A6J1H9965.59e-4369.42EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1KTW38.65e-4267.77EPIDERMAL PATTERNING FACTOR-like protein 9 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1DR941.61e-3861.60uncharacterized protein LOC111023601 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A2R6P6P21.55e-3363.46Stomagen like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc31935... [more]
BLAST of Cucsat.G2820.T8 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G12970.11.2e-2454.95stomagen [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038572Stomagen, C-terminal domain superfamilyGENE3D2.20.25.390Stomagencoord: 94..138
e-value: 4.2E-31
score: 108.6
IPR044858Stomagen, C-terminal domainPFAMPF16851Stomagencoord: 90..137
e-value: 5.2E-33
score: 112.8
IPR031753StomagenPANTHERPTHR37239EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 9coord: 41..138

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G2820Cucsat.G2820gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G2820.T8.E1Cucsat.G2820.T8.E1exon
Cucsat.G2820.T8.E2Cucsat.G2820.T8.E2exon
Cucsat.G2820.T8.E3Cucsat.G2820.T8.E3exon
Cucsat.G2820.T8.E4Cucsat.G2820.T8.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G2820.T8.C4Cucsat.G2820.T8.C4CDS
Cucsat.G2820.T8.C3Cucsat.G2820.T8.C3CDS
Cucsat.G2820.T8.C2Cucsat.G2820.T8.C2CDS
Cucsat.G2820.T8.C1Cucsat.G2820.T8.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G2820.T8Cucsat.G2820.T8-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:2000123 positive regulation of stomatal complex development