Cucsat.G2311.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTAAAATATTTTGAAACGAAAGGTATCTTCAAGACAAAGAGAAAAGGGAAAATAGGGAAAGTTCAAATCATACGCTTCCTCTCCCCGTCGGATTCGTATCGACGCAGTCCATGACTAGTTGGTAGCCCAGCAGCCTCTGCATTCTGCCATGGACGAACCCCCTACTTGTGCAACTACTTACAGCCCCTTTGTTGATGAAACCACCGACGACGACCGCGAAGATATTGCCGCGGTTGATTCATCTCCGGGGAACTCAACCCGGACGCTGTACGACCCTCCCCCGTGCTCAAATCGCAATAGGAAGAAGAAGAAGAAGAAGAAAAGGGTTGTCATTGATAACGTCCAAGTACTGCCTTCTTCGTCTTCTTCGTCTTCTTCTTGTTCTTCGCCCGCCAGATTGTTGCAGAGAGGCGTCAATTGCAAACGCCGACGGCCCAAAGTTATAATTGCTCAATCGCGGCGTATTGATGGAGATTTTGAAAATGTGGCGCTTTTATTGGGAATGTCGTTCGCAGCTTTTGTTGCCCAGGTTCCTTCTTCTTTTCCTGTTTCATGGGGTTTCTCAGGCTTGGGGAAATTTTGCTTCATTCTCATATTCAATCTTATGCATCATTTATGATTTTTCTTCTTCAAATTAATTGAAAAAAGAAGTTTATTTATATTGCAAATTTGATTACCGTATTCAGACAAAGTTGAGTGTCACCTGAATCACATAGTGATGGCCGAATCGCCGATGGGTGTCTTTGAGTCTTTGACCTATTTTATGAGAGAGATTCTGGAACTTAAGTCCTCCGTGTGGCGTTTATCTTGCTCATCAATTTGTTAGGAGTAATGTGAAATTTCTACAAATTTGAGTAGCACACGAAGTAAAGGCGCATTCTTTTTGGGTTCCCAAGTCTATTCAACCATCCATATTAATGTTAGAAGATAATGGTGGAAGTTAACATTGCTCCATGTTAGAAGATATAGGTGGAAGTTAACATTGATATGGGAGCCTTTTGTTTTGAACATTATCTCTGATTGCCAACTTTGATTCAAGTGGGAAAGCGATTCTAGTGGCTTCCTAGTATGGTTTGAAATCGTAGAACTTTGATGATCACATAGCTTTAGGTGTAATGCACTTTTTGATATAAATGGAGTTGTCTGCAAATGTTTTAAAACTAAAAATTATGAATTTCATGGACTCTTTCATGGCATATTATTATGTTATGTTTTTTAGGGCTAACCACTACGTGTTTGTGTGCTTCTAAGAACTACTAATTTTAGTTGCTTGCTGATATTTCAGTGTTTGTTTTTTCCTATTTTATTCTGACTTTAGGTGCTTGAGAGGCAGGACATGTCTGGTGAAAGGATGCCTGTTGATCATCTCTCAGTGGTATGCTACTATTCTCTATAATATGAATGGCTTTGAAACTAACTTAGCTTCTTCTTCTTCTTCTTTTTTTTTTTTTGCTATGTTAAAGAAGTGAACTGAGAAATGTTTTGCAACTTGTTGAAATTTACAAATAAACACAAAAAACAAATAGCGCTTGTTTGATATTCATTTGATTTTTATAATTTTTTGTTGCTTTCTCTCAATTTCCTTACCATGGTTCTCATCTTTTCTAAATAAACATTTAAATCCTTTGCCAATTTTCAGAAAACAAAACAAGTTTCTAAAAAGTAATTTGTTAGTTTAACAAAGCAAAGAAATCAACAAGTGAAAGATCAATTTCAAAAACCAAAAAGTTATCAAACAGGACTTCAATATTCACACAACTCCTTGGAATTATTTTGAAGCAGCAGATGGCCCATCCTAATCCATTCTCATTCAAATTTTCGTGTTTATTATGAATTCTTAATTGTTTTGCTTCTTAATTTCCACAATATAGCCATTAGTGTGATGTTAATCTTTATTCCCTTGTGTTGAAATTACTGTATGCATTGAGCCATATGATGAACATCATCTTTTCTACCTGCAGATATGCACTTCAGGTATAAGAGAATCTCTGGTCAATGTAAGTTGATCTCTAACTACAGCTCTTCCCAACTATTCAAGTTTTACATGTTCTGTGTTATTCATTCAGCATTGCCCAGAGTTCGATGCTGAAGTCTCTTCAACATGCATGTTCTTTGACCGGTTATATGGAAACAGGTTTTTGGGGACAAGCTTGATTGGTTTCTAAAGAAATTTGAGAGTTCATTTAGCAGCACATTAAGAACTCTTAGATCAATCAGTGAAGCATCTGCAAGAACTGGAGTGTATTCTGGCAGCAAACGCAAGGAAGAAAAAATCGCAGTAGATTCGACCCTTGATAGGAAAAGGGATGTGACAAGTAGCTCTAGTTTGGAAAAATGTATCTTGGAAGAATTTTCTAGGAGCGACACACCTGTTGATCAATTAAGTTTAATTGAAGACGTAAAGGAAAGCGTTTCTGATTCATTTGTTCATCAGTTAGCTTTGAGTATACTGAGAAATGATGAGGTTTCTGTTTCCCCACGGGCAGTTGGTTTTTACAGAAAAGAGCTAGCAGTTGGCACTTTTGAAAGATCTGTTGCCGAACAGGCACGTGCAAACGATCTTAAGACAGTGGAGCTTAGCCTTGAAATGAAGAAAATAAAATTGAAGGAGAGAGAGATCGCAATCAACTGTGACTCAAACAATCTTGAGAGGTCAAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCCAAGAAGTTCAAGAATCAGGTAGAAGACACAAGACATTCAGAACTGCTTAAAAAGTGCATAGACTGTCTTGTTGCTGGTTTGCTTATAATGTCCGTGGCCCTCTCTTACGGAGCATATGTTTATTCATACCATAGAATTTCTGAAGCTACTGCAGTTTGTACACCTTCAACCCAGGCAAGTTTAGCACCCTTCCTCCTGTTATGGTTCGTTTCGTATACTTGTAGATATGCAACTTGAAAACTGCATATGTTATGACGAATTTGATTGTTTTGTCCACGTTCAATTTTCCAGAAACCAAGTTCAGATCATTTCTACTAAAAATTTTGGAGAACCATCCTCTATGATTCTTTGTAGATGTGTTTTCTATCTCATGTTTTTCAGATTAAAAGCATTCATGCAACGAACTTATTTTAGATTCTTTGCTCATTACAGGGTTCAAAATCTTGGTGGATGCTAAATCCTATGGCATCTTTGAACTCCGGGTGGCATGTATTAAGGTGTCAAGTTCAAGTTGTGAGTCGGATGGCGTTTGGTGTGATTATGATTCTTGCAATTGCTTACTTGCTTCTCCAACGCTCAGCAACTTCAAACCAGGCAATGCCAATTACTTTCATCGTCTTGTTGCTGGGAGGTGCTTGCGGTTTAGTTGGGAAGTTGTGCATTGACACACTGGGAGGAAGCGGATATCATTGGCTTATGATTTGGGAAACATTGTGCTTATTGCACTTATTTGCAAACATTTTTACGTCTGCACTGTTTTTGATCCTACATGGTCCGATTGAGGTTTCTCAGGCCAAAAATCGTCACATGATCTTGCCATATTGGTTTCGCCGTGTTGTATTCTACACCCTTCTACTTGTGTTTATGCCATTGTTGTGTGGGCTAATTCCATTTGCAGGTATTAGTGAATGGAAAGACCATTTTTGTCTTTTAGTGAGTGGAATGATTGCAGCAGACAGCTACTGAAGCATTGAGTTCGAGCTGAATTGCATTTTGTATTAGTATCTATAGGAGACCCCAAAAGAATATGGCTTTGGAGTTAAAGTGCTAATTTATTATTATTATCATTATCATTATTGTTGTTATTAATGTATGAATAATAATGATAACAGTACGTTGAGTCATTATCTTGCTTCATTCTCTCTTGATACTAACACTTGGGCTG ATGAAGAAAATAAAATTGAAGGAGAGAGAGATCGCAATCAACTGTGACTCAAACAATCTTGAGAGGTCAAAATTGGCAATGGGCATATCAAAAGCCTCTTTTAAGGCCAAGAAGTTCAAGAATCAGGTAGAAGACACAAGACATTCAGAACTGCTTAAAAAGTGCATAGACTGTCTTGTTGCTGGTTTGCTTATAATGTCCGTGGCCCTCTCTTACGGAGCATATGTTTATTCATACCATAGAATTTCTGAAGCTACTGCAGTTTGTACACCTTCAACCCAGGGTTCAAAATCTTGGTGGATGCTAAATCCTATGGCATCTTTGAACTCCGGGTGGCATGTATTAAGGTGTCAAGTTCAAGTTGTGAGTCGGATGGCGTTTGGTGTGATTATGATTCTTGCAATTGCTTACTTGCTTCTCCAACGCTCAGCAACTTCAAACCAGGCAATGCCAATTACTTTCATCGTCTTGTTGCTGGGAGGTGCTTGCGGTTTAGTTGGGAAGTTGTGCATTGACACACTGGGAGGAAGCGGATATCATTGGCTTATGATTTGGGAAACATTGTGCTTATTGCACTTATTTGCAAACATTTTTACGTCTGCACTGTTTTTGATCCTACATGGTCCGATTGAGGTTTCTCAGGCCAAAAATCGTCACATGATCTTGCCATATTGGTTTCGCCGTGTTGTATTCTACACCCTTCTACTTGTGTTTATGCCATTGTTGTGTGGGCTAATTCCATTTGCAGGTATTAGTGAATGGAAAGACCATTTTTGTCTTTTAGTGAGTGGAATGATTGCAGCAGACAGCTACTGA MKKIKLKEREIAINCDSNNLERSKLAMGISKASFKAKKFKNQVEDTRHSELLKKCIDCLVAGLLIMSVALSYGAYVYSYHRISEATAVCTPSTQGSKSWWMLNPMASLNSGWHVLRCQVQVVSRMAFGVIMILAIAYLLLQRSATSNQAMPITFIVLLLGGACGLVGKLCIDTLGGSGYHWLMIWETLCLLHLFANIFTSALFLILHGPIEVSQAKNRHMILPYWFRRVVFYTLLLVFMPLLCGLIPFAGISEWKDHFCLLVSGMIAADSY Homology
BLAST of Cucsat.G2311.T3 vs. ExPASy Swiss-Prot
Match: Q9LV85 (Protein CPR-5 OS=Arabidopsis thaliana OX=3702 GN=CPR5 PE=1 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.8e-58 Identity = 112/259 (43.24%), Postives = 175/259 (67.57%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. NCBI nr
Match: XP_004143575.2 (protein CPR-5 [Cucumis sativus] >KAE8647581.1 hypothetical protein Csa_003042 [Cucumis sativus]) HSP 1 Score: 535 bits (1377), Expect = 1.08e-186 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. NCBI nr
Match: XP_008440680.1 (PREDICTED: protein CPR-5-like [Cucumis melo]) HSP 1 Score: 521 bits (1342), Expect = 2.08e-181 Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. NCBI nr
Match: KAA0036253.1 (protein CPR-5-like [Cucumis melo var. makuwa]) HSP 1 Score: 521 bits (1342), Expect = 5.32e-175 Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. NCBI nr
Match: TYK12647.1 (protein CPR-5-like [Cucumis melo var. makuwa]) HSP 1 Score: 516 bits (1329), Expect = 4.91e-173 Identity = 261/273 (95.60%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. NCBI nr
Match: XP_023543997.1 (protein CPR-5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 454 bits (1167), Expect = 1.77e-154 Identity = 224/271 (82.66%), Postives = 244/271 (90.04%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. ExPASy TrEMBL
Match: A0A0A0KM29 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G501900 PE=4 SV=1) HSP 1 Score: 535 bits (1377), Expect = 9.08e-189 Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. ExPASy TrEMBL
Match: A0A1S3B1Q2 (protein CPR-5-like OS=Cucumis melo OX=3656 GN=LOC103485021 PE=4 SV=1) HSP 1 Score: 521 bits (1342), Expect = 1.01e-181 Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. ExPASy TrEMBL
Match: A0A5A7T043 (Protein CPR-5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G00520 PE=4 SV=1) HSP 1 Score: 521 bits (1342), Expect = 2.57e-175 Identity = 261/271 (96.31%), Postives = 267/271 (98.52%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. ExPASy TrEMBL
Match: A0A5D3CL29 (Protein CPR-5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002350 PE=4 SV=1) HSP 1 Score: 516 bits (1329), Expect = 2.38e-173 Identity = 261/273 (95.60%), Postives = 267/273 (97.80%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. ExPASy TrEMBL
Match: A0A6J1BW75 (protein CPR-5 OS=Momordica charantia OX=3673 GN=LOC111005899 PE=4 SV=1) HSP 1 Score: 452 bits (1162), Expect = 2.37e-154 Identity = 225/271 (83.03%), Postives = 246/271 (90.77%), Query Frame = 0
BLAST of Cucsat.G2311.T3 vs. TAIR 10
Match: AT5G64930.1 (CPR5 protein, putative ) HSP 1 Score: 226.1 bits (575), Expect = 3.4e-59 Identity = 112/259 (43.24%), Postives = 175/259 (67.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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