Cucsat.G226.T7 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G226.T7
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	U3 small nucleolar RNA-associated protein 14 B isoform 1
Location	ctg1: 5065642 .. 5069485 (-)
RNA-Seq Expression	Cucsat.G226.T7
Synteny	Cucsat.G226.T7

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAGCTATGAATTCCAACCTCATTTTGTTTCTGTAAAAGGACCAACAGAAGCCACTGGATAACGAGGCAGCCGTATACGGAACCATCAATAGCATCTCACTCTCACTCACACTCACACCAGATAATCAATAATCCACCATGAATTTCTTCTTCACCACTGAGATTTCAAACCCTTCTTCCTAATACTCCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGGTCTGTATTCTTCTTCTTCTTCTCCCTTTCTCTCTCTGCTTCTGCTTTTGTTTCTGGAGTTTAAGATCTGTTTTTTCTCTTTGGAAAACTGGGTGAAATGTACTTGATTTGCTTGTGTTAAGCAGTTTTAGTTTTAGTGATTATTGATGAACATTTGAATGACACTATTCTTTTACTTGCTTTTTTGTTTTAATTTTGCTGGTATTATCAATTCTGCGTTCAACGTAGTCCATTTATCTTATTAAGACAATAAGATCCTCTGCATGTCTCAAAGATGGTGGGTTCATCAATCTTGGATATAAAATTCAATTTTTGTTTTTGGATTGAATATCAAAATCACTTACTTACCTAACAACTTAAACTAATGAAGTGATAATTTAATTATATCAACACTTCAACAATCCCTATAACTAGTTCTTATTCTGTATTTCTTAAACTTTCAAAAGAAACATAGAAATTTTCCTTTTAGTTGTGATGGAAGGGGAAGGGGAGCTTTTCCACCTTACATTAGAGGGCATTTTCTTTGATAGCTGTGGAGAGTAAAATGAGAATGGTTAGCTATTATATTAAATTTATCATTACCTACTAGTTTAAGCTTTTAAGTGAATAGGTGATTTAAGATGATATCAAAATAGGTTGTTTCAGAATGTCGTGGATTCAAGCCTCTACAATATTATTTCTTCCCCAATTAATATTTACTTGCTTGACTATTCTTCATATTTCATGTCTGCAAGTGAATGAAGTATTAGATATTATATTTAATTTATTCTTACCCATTAGCTTGAGCTTTTAAGCTTTTAGATGATTGGTGATTTAAGAACCATAAGTATATATAACATTCTTGCTGAGAGGTTGATTGAGAGAGTGTGGCTCACTTCAATCCCTCCCTTTAGATATATGCTATCGAGTTCTTTTATAAAATTTAGTTTTGTTTTGCATGGAATATCTCCAATCTGAAGTTTAGTTGTGTTTTTGGATGGAATATCTTTGATTTGCTTCCTCTGGCTCAGGCTTTGAAAACTGGTTTCTAGTGGGAGAAAAATGTGTGTATGTAGCTCTCTTTTGTTTGGATTCAAGAACTGGTGGAAGATGAATTCCTTTTTGTTTTAGCTTTTAGAGCCTTGGTTTAATCTGTTAACATATATGGCCATTCAGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATGTTAGTCTATATTATATCTTTTGCATTTTCAACCTCAAATCTTGAGCCTATATAACTTCTAAATGACATGCTGTCACTTCTTGTCTTGCATTTGCAGTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTCGTTTGAGGAGATTACTCGATTTTGAAATGATTAGCACACTTCATTTACCATCCATATTGCAGATCAACTCTGAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTTTCTGGTAAATACCAAATTTTTATAGATCCCAAGTTCTTATTGTTGTTGGATCGTGAACTGTTAGTTTATCATGGTTTGGTTTGTTTCGTTTTCCTTTTCCTTATATGCAAGAACATCGAATACTGCATAACAACTTCTTATTTATTTGTGTATATTGATTCTTCCTTCACAAATTCAGTGGTGGATGACAAGTTTGTGAGGGACTCAGTGAAGTTCTCCAACAAAACTTCTTCCACCTTTGGACAAGCTTTTAGTGACTTTACTTCTCCAAGAAAAGGTAAGATTCTTCCTGGACTAAATCAATCTTCCCACCCCCCAAAGAAATATTCAACCTACTCGAAACCCAACCACCTCTTGTGATTGATTGAAGGGAAGGAAACTTCTGGTGCAGTTGTTGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGATTGATTTTGTTGTCGACCATAGTCATAAGATACTCGTAAGTATTCAAATAGCATGCTTTTTCTTATGTAATGCTTGTGAACCATGGATTGCAGTTAGTATTCTTCAGAAGCACATCAAATTTAGGGGGACAAGTTCAGTTGGTTCAATTGGGTTTGCCAGATTGAATTAAGTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGGAATTTCCAATTCTGAAACAACTGTAGAAATTTGTGAAATGCCTTCACTTTTGTATATTGATTTTGATACAACAAGTCTAAGGTACAATCTTTACTCTGTAACTAATAAAGACTGATGAACTACAACATAAACTCTTTGCTTATTTAATTCAAACATTGGAAAAGTCACGTTTTTGGATACCTTTTTTATTTTTATATACTTGAGGATATTGTCTCGAAAACCCGAGAAGCTAGTGTCTTCCATCTCCAACTTTCTGCAGGAGAGAACAGAGGCAAGTTAGACCAACAACGTCTAAGCCATTCAAACAATAATATGCAGAGAAAAAGAAAGGTTAGTATTGATCTTTTTAAATCACATTTTCTTCCAACATATTGGAATAAATACTTACTGGCTCTTAAAGTTATTAATCATATCCAGCCAATGTTAGATTTAGACAAAATTGAAGGAATAGAATTTTACTAGACCTAGACATAAATTTAAATGAACATCTAATGGATCAATTTTAGAATGTGTCAAATTTTCAACCAAAGTTAGTTTTCTTAGCTGCTGCTTCTGTAATAGGAGGAGTTCACAGGGCATTCTAATTTCAAATCTGCAAATGAAAAGAGAGGAAGACTATTATTCTGTTTACAGACGAGAAATGGAAGATTCTCAGGTAAGGGCAAAGATTGTAGCTAAGACTGTCTCTACTCTGTGCCGTCTCTGCATCTGGTTGAAGCAGGGATGAGACCCTACAGTCTCTATCCAGTGCCCTTCCCGCTTGCTATTAGTCTAAGTATCAATGCAATGTCTTTCTTATATGTCATTTTAGGCGATATATTGTTGTGGCTGGTCTTACTAAGAGTAATAGCAACTACTGGGTTTGCTTGCTAGAACCCTTACGATGAAGCACTTGAAAGTTGGAGTGACATTCTCTTGCTCTCTCCGACTATTATGCCCAAGACCTTATTTTCTATTCCTTCTTGACAGAAATCTACTAAAGATTGGAAGTTTAGCACCAAATAGAGAACCTCAATGTTAAAAAGCTTAATCATTAATTTAACCTTTATTATTTTAGA

Coding sequence (CDS)

ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTCTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCTTCTGCAAACCAAGTGGGCTTCGTTTGAGGTTTTATGGATGGAGATTGTTGTTTCCCGGTGGTGGTTGGGTTGACCAACGGGTTTTTGGAAAGCATGGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGCAAGGTTTAACCAGGGTTTTGGGTTTAACGGCGGCGGTGGTGACGGTGGTGACGGTGGTGACGGCGGAGACGACGGGGCAACTGCGAGGCTTGTGGGTAATATTGCTTTGGCTGCTGGCTTAACTTACCTCTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGCGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAA

Protein sequence

MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQRVFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

Homology

[Close]

BLAST of Cucsat.G226.T7 vs. NCBI nr
Match: XP_004149291.1 (uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical protein Csa_010420 [Cucumis sativus])

HSP 1 Score: 362 bits (930), Expect = 2.16e-125
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176

[Close]

BLAST of Cucsat.G226.T7 vs. NCBI nr
Match: XP_008452285.1 (PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 uncharacterized protein E6C27_scaffold230G00230 [Cucumis melo var. makuwa] >TYK03278.1 uncharacterized protein E5676_scaffold298G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (842), Expect = 4.46e-112
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]

BLAST of Cucsat.G226.T7 vs. NCBI nr
Match: XP_038905451.1 (uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_038905452.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida])

HSP 1 Score: 269 bits (687), Expect = 1.80e-88
Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV     +G RLR YG RL F      + R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGG KGKRG LIVARFNQGFGFNGGGG GG    GGDDGATARL+GNIALA GLTY
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGG----GGDDGATARLLGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]

BLAST of Cucsat.G226.T7 vs. NCBI nr
Match: XP_038905448.1 (uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_038905449.1 uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_038905450.1 uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida])

HSP 1 Score: 269 bits (687), Expect = 3.28e-88
Identity = 144/176 (81.82%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFST NILH++FCNKPTKFNPLP PKV     +G RLR YG RL F      + R
Sbjct: 1   MTSFIRFSTLNILHDSFCNKPTKFNPLPAPKVASWDRNGFRLRVYGRRLSFLDVCRGNVR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGG KGKRG LIVARFNQGFGFNGGGG GG    GGDDGATARL+GNIALA GLTY
Sbjct: 61  VFGKHGGSKGKRG-LIVARFNQGFGFNGGGGGGG----GGDDGATARLLGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]

BLAST of Cucsat.G226.T7 vs. NCBI nr
Match: KAG7015466.1 (hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268 bits (684), Expect = 5.16e-88
Identity = 139/176 (78.98%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C  +G RLR    +L F  GGW +  
Sbjct: 1   MTSFIRFSSFNLLHDNFYTKPTRFNPLPPPKVASCHRNGFRLRLCRGKLPFLSGGWGNNG 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           V GK+G FKGKRG LIVARFNQGFGFNGG    G GG GGDDGATARL+GNIALAAGLTY
Sbjct: 61  VSGKYGVFKGKRG-LIVARFNQGFGFNGG----GSGGGGGDDGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL
Match: A0A0A0L5A4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.05e-125
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY
Sbjct: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176

[Close]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL
Match: A0A5A7TVG5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G001050 PE=4 SV=1)

HSP 1 Score: 328 bits (842), Expect = 2.16e-112
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL
Match: A0A1S3BUA7 (uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=4 SV=1)

HSP 1 Score: 328 bits (842), Expect = 2.16e-112
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QR
Sbjct: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQR 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           VFGKH GFKGKRGRLIVARFNQGFGFNGGGGDGGD      DGATARL+GNIALAAGLTY
Sbjct: 61  VFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGD------DGATARLLGNIALAAGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 170

[Close]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL
Match: A0A6J1CP68 (uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012900 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 3.43e-88
Identity = 137/176 (77.84%), Postives = 149/176 (84.66%), Query Frame = 0


Query: 1   MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQR 60
           MTS IRFSTFNILH++FC KPT+F+PLP  KV FC  +G RLR YGWRL F GG   ++ 
Sbjct: 1   MTSIIRFSTFNILHDHFCKKPTRFSPLPARKVGFCNRNGFRLRAYGWRLTFLGGSCGNEG 60

Query: 61  VFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLTY 120
           +FGK  GFKG+RG LIVARFNQGFGFNGGGG GG     GDDGATAR++GNIALA GLTY
Sbjct: 61  IFGKDLGFKGRRG-LIVARFNQGFGFNGGGGGGG-----GDDGATARILGNIALAVGLTY 120

Query: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQ  CPNCGN+FQIFK
Sbjct: 121 LSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQGTCPNCGNDFQIFK 170

[Close]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL
Match: A0A6J1JCT5 (uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302 PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 3.54e-88
Identity = 140/177 (79.10%), Postives = 151/177 (85.31%), Query Frame = 0


Query: 1   MTSFIRFSTFNIL-HNNFCNKPTKFNPLPPPKVVFCKPSGLRLRFYGWRLLFPGGGWVDQ 60
           MTSFIRFS+FN+L H+NF  KPT+FNPLPPPKV  C  +G RLR  G +L F  GGW ++
Sbjct: 1   MTSFIRFSSFNLLLHDNFYKKPTRFNPLPPPKVASCDRNGFRLRLCGGKLPFLSGGWSNK 60

Query: 61  RVFGKHGGFKGKRGRLIVARFNQGFGFNGGGGDGGDGGDGGDDGATARLVGNIALAAGLT 120
            V GK+G FKGKRG LIVARFNQGFGFNGGGG GG     GDDGATARL+GNIALAAGLT
Sbjct: 61  GVLGKYGVFKGKRG-LIVARFNQGFGFNGGGGGGG-----GDDGATARLLGNIALAAGLT 120

Query: 121 YLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK 176
           YLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Sbjct: 121 YLSVTGQLGWILDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSTCPNCGNEFQIFK 171

[Close]

BLAST of Cucsat.G226.T7 vs. TAIR 10
Match: AT4G27390.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 9.7e-31
Identity = 58/79 (73.42%), Postives = 70/79 (88.61%), Query Frame = 0


Query: 98  DGGDDGATARLVGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAG 157
           +GGD+    R++GN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA 
Sbjct: 87  NGGDNNGNGRILGNLALAIGLTYLSMTGQLGWILDAIVSVWLIVVIVPILGLGAFFWWAQ 146

Query: 158 RDIVQSNCPNCGNEFQIFK 177
           RDIVQSNCPNCGNEFQIFK
Sbjct: 147 RDIVQSNCPNCGNEFQIFK 165

The following BLAST results are available for this feature:

BLAST of Cucsat.G226.T7 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G226.T7 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149291.1	2.16e-125	100.00	uncharacterized protein LOC101205846 [Cucumis sativus] >KGN56214.1 hypothetical ...	[more]
XP_008452285.1	4.46e-112	92.61	PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo] >KAA0046868.1 unc...	[more]
XP_038905451.1	1.80e-88	81.82	uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida] >XP_03890545...	[more]
XP_038905448.1	3.28e-88	81.82	uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida] >XP_03890544...	[more]
KAG7015466.1	5.16e-88	78.98	hypothetical protein SDJN02_23102 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cucsat.G226.T7 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5A4	1.05e-125	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G099750 PE=4 SV=1	[more]
A0A5A7TVG5	2.16e-112	92.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BUA7	2.16e-112	92.61	uncharacterized protein LOC103493356 OS=Cucumis melo OX=3656 GN=LOC103493356 PE=...	[more]
A0A6J1CP68	3.43e-88	77.84	uncharacterized protein LOC111012900 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1JCT5	3.54e-88	79.10	uncharacterized protein LOC111483302 OS=Cucurbita maxima OX=3661 GN=LOC111483302...	[more]

BLAST of Cucsat.G226.T7 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27390.1	9.7e-31	73.42	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplas...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36785	OS05G0502500 PROTEIN	coord: 9..176

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G226	Cucsat.G226	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G226.T7.E1	Cucsat.G226.T7.E1	exon
Cucsat.G226.T7.E2	Cucsat.G226.T7.E2	exon
Cucsat.G226.T7.E3	Cucsat.G226.T7.E3	exon
Cucsat.G226.T7.E4	Cucsat.G226.T7.E4	exon
Cucsat.G226.T7.E5	Cucsat.G226.T7.E5	exon
Cucsat.G226.T7.E6	Cucsat.G226.T7.E6	exon
Cucsat.G226.T7.E7	Cucsat.G226.T7.E7	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G226.T7.C3	Cucsat.G226.T7.C3	CDS
Cucsat.G226.T7.C2	Cucsat.G226.T7.C2	CDS
Cucsat.G226.T7.C1	Cucsat.G226.T7.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G226.T7	Cucsat.G226.T7-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane