Cucsat.G21588.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGGGAAATGGCCTCGGGAAAGTGCCAACTGCCGGCTAACAATTCTTCTCCCCCATTTTCTCTTCTACAATTCCAGCCTTGATTTCCAAATCCTCTCCCTCACTCCGAACCTATGTCAATCGCTCTCTCTTCTTCCTCTTCGCCACTTTTTGCTTTCTCCTCCGTCGAATTGAAGCCAATCAACACCAAGAATCTTGCCTCCTTCAGAATACCCACTTCCTTCTCTGCACGCCCTTTAATTTCCAGGTAACGCCTACACGGATTTTATCAGCTTCATTGATTGCCATATCTTGCTTTTCTATGAAATGTTTCTTAGTGAGCTGAGAAGGGTTTTCCCAGGATTCAGTTTTGGGGTTGATTTCGGAATAATTTCCAAGCTCAATTTCGTTTTCTTTCTTTGAAAAATTGTCGTGAGAATGATTGGTTTTGTCATTTTTATCATTTTCTCCCATCAATTGGGTCTGTTGATGTAGAAAATCATGTCGGGTTATGGCAACTGTTCTAAAGGAAGATGAGGAAAAAGTGGTTTTGGAGGAATCATTCCCTCCCAAGGCTTCTCCTATTCAAGACGGGGAAGGAGGAAGTGGCCAAGGACCAGAAAGTTCATCATCTAATGGCTTTGATAAATGGATCGTTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGTAAACTCAGTCCACTGTTCTTTGCTTGTGCATAATTGGTCCTGCAATGCTTGAGATGTTGAATCGTGACTCCTCCTTATTAATGTTTCTAGGATTCGGTAATCAAAATTCTTGATGCATTTTACCACGATAGACACTACGCAAGGTTCTTTGTGTTGGAAACTATTGCAAGGGTTCCCTATTTTGGTGAGCTTTTAATTGCTTCATGCCTACCACTTTGTTAACACATTCTTGTTGATTTCTTCCTTGAAACAGAGATGTTTCGTTTGGTATCTTACCCATCTAGATTCTGCTTTTCTGATTTCAGATTCAGTTAATCAAATGAATTTAGTGAACATCCATCCATTTGACAGATTTGTTTTTTAAAATTTCTTTTGGATTTGAGATCCTAGACATTCTCGAAAACAGTGGAAACATAAAATGTAACTTTGATTTTCATCGAATCCCTTGTTTTCAAATTTTTGTTTTTAGATCATTAACCAAAAATTACTCCCTTCTCAATAATGGTAGTCTGTTATCTGAATGCAGTGTGGTGAGCTGCAAAAACAATTTTATGTCACCTAATGAAGAACATTCTCATTCGCACAAAAATGGGCTCTTTAATAAATATGCAGATTGGTGATCAATTTAAAATAATTGGTTCTGCTACTATTTTAATTTTGGAAGCCAGATTCTACAGCTTCTGTGGGTGTTTATTTGAGG ATGTCAATCGCTCTCTCTTCTTCCTCTTCGCCACTTTTTGCTTTCTCCTCCGTCGAATTGAAGCCAATCAACACCAAGAATCTTGCCTCCTTCAGAATACCCACTTCCTTCTCTGCACGCCCTTTAATTTCCAGAAAATCATGTCGGGTTATGGCAACTGTTCTAAAGGAAGATGAGGAAAAAGTGGTTTTGGAGGAATCATTCCCTCCCAAGGCTTCTCCTATTCAAGACGGGGAAGGAGGAAGTGGCCAAGGACCAGAAAGTTCATCATCTAATGGCTTTGATAAATGGATCGTTAAGCTTGAACAATCTGTTAATGTTCTTCTCACGGATTCGGTAATCAAAATTCTTGATGCATTTTACCACGATAGACACTACGCAAGGTTCTTTGTGTTGGAAACTATTGCAAGGGTTCCCTATTTTGTGTGGTGA MSIALSSSSSPLFAFSSVELKPINTKNLASFRIPTSFSARPLISRKSCRVMATVLKEDEEKVVLEESFPPKASPIQDGEGGSGQGPESSSSNGFDKWIVKLEQSVNVLLTDSVIKILDAFYHDRHYARFFVLETIARVPYFVW Homology
BLAST of Cucsat.G21588.T4 vs. ExPASy Swiss-Prot
Match: Q56X52 (Ubiquinol oxidase 4, chloroplastic/chromoplastic OS=Arabidopsis thaliana OX=3702 GN=AOX4 PE=1 SV=2) HSP 1 Score: 113.2 bits (282), Expect = 2.4e-24 Identity = 64/106 (60.38%), Postives = 76/106 (71.70%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. NCBI nr
Match: XP_004145426.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucumis sativus]) HSP 1 Score: 270 bits (690), Expect = 6.55e-88 Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. NCBI nr
Match: XP_008458986.1 (PREDICTED: ubiquinol oxidase 4, chloroplastic/chromoplastic-like [Cucumis melo] >KAA0054287.1 ubiquinol oxidase 4 [Cucumis melo var. makuwa] >TYK12325.1 ubiquinol oxidase 4 [Cucumis melo var. makuwa]) HSP 1 Score: 254 bits (648), Expect = 1.50e-81 Identity = 130/143 (90.91%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. NCBI nr
Match: XP_038893742.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic-like [Benincasa hispida]) HSP 1 Score: 227 bits (579), Expect = 4.69e-71 Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. NCBI nr
Match: KAG7012624.1 (Ubiquinol oxidase 4, chloroplastic/chromoplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 214 bits (544), Expect = 5.59e-68 Identity = 114/148 (77.03%), Postives = 126/148 (85.14%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. NCBI nr
Match: XP_038896058.1 (ubiquinol oxidase 4, chloroplastic/chromoplastic-like [Benincasa hispida]) HSP 1 Score: 214 bits (545), Expect = 4.03e-66 Identity = 106/130 (81.54%), Postives = 117/130 (90.00%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. ExPASy TrEMBL
Match: A0A0A0M130 (Ubiquinol oxidase OS=Cucumis sativus OX=3659 GN=Csa_1G699610 PE=3 SV=1) HSP 1 Score: 270 bits (690), Expect = 3.17e-88 Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. ExPASy TrEMBL
Match: A0A5A7UI87 (Ubiquinol oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00950 PE=3 SV=1) HSP 1 Score: 254 bits (648), Expect = 7.27e-82 Identity = 130/143 (90.91%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. ExPASy TrEMBL
Match: A0A1S3C992 (Ubiquinol oxidase OS=Cucumis melo OX=3656 GN=LOC103498237 PE=3 SV=1) HSP 1 Score: 254 bits (648), Expect = 7.27e-82 Identity = 130/143 (90.91%), Postives = 137/143 (95.80%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. ExPASy TrEMBL
Match: A0A6J1GSZ7 (Ubiquinol oxidase OS=Cucurbita moschata OX=3662 GN=LOC111457254 PE=3 SV=1) HSP 1 Score: 214 bits (545), Expect = 3.14e-66 Identity = 114/148 (77.03%), Postives = 127/148 (85.81%), Query Frame = 0
BLAST of Cucsat.G21588.T4 vs. ExPASy TrEMBL
Match: A0A6J1K2B2 (Ubiquinol oxidase OS=Cucurbita maxima OX=3661 GN=LOC111490026 PE=3 SV=1) HSP 1 Score: 213 bits (541), Expect = 1.26e-65 Identity = 113/148 (76.35%), Postives = 126/148 (85.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|