Cucsat.G21587.T6 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G21587.T6
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase COP1-like
Location	ctg944: 684670 .. 696652 (-)
RNA-Seq Expression	Cucsat.G21587.T6
Synteny	Cucsat.G21587.T6

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCTTCCTTCCCATTGCCATTCTCATTTTCACACGAACCCCATTTTATTCCCTTCCCTTCCCCCTTCCCCCTTTCTTTCTTCTTCCGTACGTTAATCTCTCTCTCTCTTCCATCTTCCTTCTTTAAACCTTTCGCTCTCTCTCTCTCTCTCTGCGTGTGTGTTTTCAATGGCAGCCACATAATTTTCACTTCCTCTTCTCCTTCACCAACTTCACTTATGGGTGGCGGTTCCATTGGAGCTTTGGTTCCTACTGTCAAAACTGAGCCTTCTACTCTCGACTCCACTCCTTCTTCTTCCCCCCCTCCTCCTCCTCCTTTGCCTCCCCTCCCCCTCCCCTCCTCCCTCCGACCTAATGCCTCCTCAATTCCAACCCGACGCTGCCAATGCTGCTGCTCCTACTCCCACTCCCACTCCCACTACCGCCCCCTCTCATTCTAATACCGATGATTTGGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAGGATGCCTTCCTCACTACTTGTGGACATAGCTTTTGTTATATGTGTATTGTTACTCATCTTCGTAATAAGAGTGATTGCCCTTGTTGCGCTCATTTTCTCCGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGGTTTGATCATCTTCATTTCTTTTTTTCTTTTTTATTTCACTTCTTTCTTCAATTGGATCTTCATTCCTTTCTTTTTCTTTTTCAATTTTATTTCCTCTCCCTATTTAATTTTACGCCATTTTTTAGTTGATAATCACATCTTAGTTTGTAGTTTTCAAGTATTTATGGGTCACTCAGTGCCTAAGATTTCGACACTTTGACTGTTGTTGCATTGGAGACTGTTATATACTGTGAGAGATTGATTGTTTAATGCTTTTTTTTTTATATAATAATTAAGTCATTCCATTATGCCCGAGATTATCTTTCTTTAATTTCATTGATTTTTGCTGGTCTTCCCCTAGATCTGTGCAGTTCCTTAGGATATTTTTGTTATGCAATCTAGATTCTATATGTATGTTTGCTAATTTTTTTGACATTTGTTTTTTGGAAAATTGTTTATGGAATCTGTGGTCCTAATAGTGAATGTCTAAGTGTATCTTGATTTGGAGTTGAAAATATTATACAGTAGAGTTACATTAAAAAAAACAGAAAGTATAAACTTCTATATATAGTCTTTCATGTTATAAACTGTTTTTAGTTTTGTAAAAAATAAATAGTATCGCATACTATACTAAAAATTTTTAGATATTTAAAATAATAGTTATACAGAATTTACATGTTCATTAATTTTAGATATAATCATGATCTGTGATTCTGTTTTATAGGTTGCTATACATGAATTACATGTTCATTAATTAATAATAATAGATGAGATTTAATAATATAATAATTTTGTTACTCGAGCTATTCTTGTGGTTTATAAAATATATTATCAACACATTATGAACATTTTCTTATTTTGGAATCCAATTTTGAAATATGCTGCAAAATACATCCAAAAGTATTGAAAACATGAAATACATTTTTTTAATTGAAAACACATTTTTTTTTAAATTGAAAACACATTTTTTTAATTGAATCTCTTGTTGTTAAATATTTAAAGTTTAAGGGGCAATAAAGACTTAAGCGCAAGATGCAAAAGAAAGTGTGGACTTTTTTTTTATGGGGAGTATATATAAAAGTACTACATTAAGAAGAGAAAGCAAATCATAATTGAAGTGGAAATATGAAAAACAAAAAAAAAAAAGATCCCTTAACGCAAGACATTTTGGATTTAGGCTTAGTAAATTTAATTTTTCTAATTAATAAATAAGGAAAACCCCTAATTATTGCTGTTTAAAAAAACAATAATAAAGCCCCAAGGTGTAGGGCTTTGAGCCTTAGGGCTTCATAATGAAAGGCTGTGCCTGAGGCACGCCTTATTTTGTGAGCCTCACCTTTCAAGGCAAGGCACCAGTCCTAGACCTTGAGCCTAGGCACGGACCTCAGAGCGCTTTTCAAAACACTGACCATATGTAGCTTTACCTTACATTCCGAGCAAAACTGTCTTGCATGTCAGCTGAGCTATGGCTTTACAATTTGTGACCTAGGCTACTTACATGGTAGAAGTTCCCAAAATCTTCATTGTGCAGTAGTTTAGCTTGATGCTAAAGTATTGTAATGTTTTATATTTAGTGTCTGATGCAATGTTAATTTTCCAATTATGCTGATGATACCTTGATCACATATTCATTTCAACTGGATTATGCAATGTTGCAATCATAAAAAGGGGGACTCTTTTTCAAAATAAATAAATAAGGGGTTGAATTTCCAATTTGACCTTATGGTTTGGAGAAAGTTAAAATTTAGTCCATGTGGTTTTAACAAACCATGGAGGATAAATTGAAGTTATATGGACTGAATTCTAACCTTTTTGAAGGACCAAGTTTGTAAATTAACCTAAATAATAATTATGCAATGAAACAAATCAACACTCTTTTTTAGAATATTTCAGTTCAAACAAGGAGTAAGGATTCACATCTGGAAGGGAGGTTTTCCAGTGTCTTGAGTAGTTGAACTGTTCAAGTTGGTTTTTATAATTGGATATTTTTGGCTCTAATATTTCAGTGATATTATGGAAGCTTCATGTTTTGTTGAAACTAAATTCTTATGCCCTTGTCTCTGACTTTATTTCTATTGATTGTGTCATTTCTATTGATTGTGTCATGATGTTTTTGTAATTCTGAATTGCAATCTTGAATTATGAGATTGATGCATCTTCATGGTTTCTTGCAATCATTTTTGCAGTTGTTAAAGAAAACTTCTGCTCGTCAGATAAAGAAGACTGCATCCCCATTTGGATATCTTCAACAGGCATTACAAAAGGTCAGCACAATTTCCATTACAATATATATACATATATTTTCTTTTTCAGAATTACAACTCACCATCACTCCAGTATGGAAAATGAACTTTAAAAGGTGTGCATCATTACCTTCAACATAGGGTTTGAGGACAATAAAGTTTTCTTAGTTGACTGTCATACTATTATTTCCACATTTGCTAATCTATGGATTTTAGTACAAACTTCCTATCATTAATCTCCTTACTATCAACCTCATCATTAAACAAGCTGAACTTTTCCGTCTCAACTTTTTGCCAGGGATGTGACATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGGTCTCTTTTACTTTGATTGTCATTTTTTTGTTTCTTGCTTATTATAAATTGGTATATGAATTTTTCGTTACTTCAATGATGAAGAGTGTTTCTGGTTCAAAAAAAAAAAAAAAGAAAGAGCAACAAACAAACAAAAAAGGTACATGAACAAGTTTATGTGCTCTTATGGAAAAAAAGAAGTTTTTTTTCTTAGGCTTGGTTGGTTAACCTGTCCGTAATTTGATTGGCTGCTTTTCAGTGTGTAAAAAATAGTAACGACTTGATTTAATATACAGGTATGAGTAACTAATGTTTGGAATTCAAGTAAGTTTAACTTTATGAAGTTGGAAATGGACTTAATGTTACTAGAAGAAGTATAAACTACTTTGATTAATGACTAAGATTGAAGAAGTACAAACTACTTTGATTTATGACTAAGATGGAGTAAGTAGTTTAGACATAACTAAATTTGTCCAGGGCATCTAAATTCCATTTTATGGAACTCTATATTTCAATCAAGTATCGGAACAATTCTTTTAATATTCTCTAGCACATTGTTGAGTTTTTATTTTCTTTTGTTTTTTGAAACGGATACAAACTTCTTTATTGATAATAAACTCAAAGTACAAGAGAGTTATACGGTGAGAGTAATAGAGAAGCCTAGAAAGGGGAGAGAGAGCGGATTAGTAGGTGTATCTGGACATCTCAACTAGGTTGACACCCCCTTAGCACCCTCATCATATCCAAATAAAAGAAAGATACTAAGGTCATGCAAAGACTGAAAATAACAATATAAACTACCAATCTGTAGACAGATGCAAAGCTGAAAAATAATAAAACATATGGAGAGATACAAAATAAAGCAAAGCAAAACTTCAAAGAAACAAATCCTGGCCTAGCAATCTGGAAAATATCAGCCCTGATTCTCTTCAGATGAAGGCAGTCCAGTGTCTTTAACTCATTTGTAAATTCGTCCACAATTGTGCTCTCTGCCTTCATAGTAATCACCAACCATACTTTAGTATAACCTTATATGGAGTATGGCTAAGTTTAACTTACATGTGTATAGAGGGTATTATGTTTAGGGATTATGACTGTATTACTGGCATTTTAGAACGTCCGGCGTTGGTGTATGCACCAAGCATTTTCCCATTATAAATACAGAGGATCTCCCATTGATTCATTCAAGAATATCTTTTGTTGATTTGCTTCGTTATTTATTTATTTTCTCATTATAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGGTAAAACTTTTATTTCAATTTAAATTTCACTTTACAGAAAAGTTATCACAATGGTGCTAATCACAGTCTGGCTTATTAGTCAGCAAAATTGCAATGATGGAGATTTAATTAGTATACTCTGAAACAACAATCGAGGTTATTGTGAAGATTGTAGATATTTGCTTCTTGGTTCTAGTGATGTTACTTTTACAAATATCATTATGACTCTCAAGCTCTTAAGTAATCATCTTTCTATTCCATATTTTAACCAATGAATACAGTGATACTCTAGTTTTTGATTGCATACACTTAAAAATTATGTTTGTCTTTCATTTTTCCGCACTTATATAGTAAGAGGCCTCGTTGCTATTTGCCTCCTTACTGGATTTTATGAACAATGTACTGGTGAAACTCTGGAGTCTGGATTGTTATTTCTTCATTATGGTTTTGGTATGTCCATGTGGAATAAACTCCTTTTTGAAACTTTAAGTTCAATCTTCTTTCCCTAAAGTCGAGTCTTCTTTTTGTTAGATTTTGGCCTAGGACTCCTGAAAACAGCATTCCTTTTAAGGATATGTCCAATTTCAGCTATTTTGTAGGTATTATGGATTTAGCAGGATAGAAATATTTGGGAGTTGTAATAATGCTTAGGCCAAAGTCTCGGTTTCTTACCAATAAACAAGAAAATAGCTTAAGCTGAAGTGGGCAGTTAGCTTTTTTGTTTCTATCTTTTCCTGGTACGAGGAATTGACAGTCTGTTCTGCTTCTGTTGAAAGCTTCTGTTGGAGATCTTGTATTGTTGATTCTCTTTCTGTTGCTTAACCTATTTATTAATATTTGTGATATGAAAACCCAACTAATTGGAATTGAAAACCCTTTTGGGATGAGAAATCACTAAAACCCCCCAAATTAACTCGATTTCAACCTTAAGGACTGGGTTAGACATTGATTGCCTTAAAGATCAAATATCTTAAGACAAATAACACATTTCTCAATCCAAGATTCGAATACTCCACCAGATAAGATGATCAGTCTCATTTAAATGTTCTTGGAATGCAACTCAATACATGAGTTACAAAATTTAAGAAGCTCTGCTGGCTAAACTTGAAAGAAACACAAATAATCTCTCTCCAAACAACCTAATAGCAAGGCTGAAATGGCCTCCTATCATAGTGAAAAGATAAAATCCCTTACTTAATAAGTCAAAAAAAGGATATAATTGGAAAAATATTAAAATTATATCAAAATTGTTAAATTAAAATTTATTTAATAATTTGATGCTTGAGTGGTTCATATCAATTTGTTATCTGTTTTACGTTTCTATAAACAAAATATGTATTACTTTTGAATTTTGATTAAAGGATAAAATGAAGATTAAGGCATTTAATTTCTCTTTTTTTTTTTTTTTGAGAAAAAGAGAGGGATTAGGAAAATAATTTGTCACCTAAAGCAATGAGTGAGCAGGTCAGGACTTTTTGTACAATAAGGAAAGTTCGGTCAGCCTATCAGAAAAGAGCTCTTCCTAGTTTGCTCATGTCAACATCTAGTTTGGAGGAGCTGTACATTAATTTGTTTTCTTTTTCTTTCATATTGATTTATTTTGTGAAATTAGGAAACTTTTAGCTTGTCTGTGCTGATTAAATCCATCTACTGATGTTATTTTGTCAACTGTTCTTAAGTTAAAGTGCAGTCAGCCGATTAGAAAAGAGTTCTTCCTTGTTTGCTTAAGTTATGTCAACATCTTTCAAAACTTAATGGTCATTTAGTTGGGGGAGCTGTACATTAATTTATTTTCTATTTCTTTGATATTGATTTTTTTTGTGAAATTAGGCAAATTTTAGCTTGTCTGCGCTGATTAAATCCATCTAGTGATGTTATTTTGTCAACCTTTCTTAAGTTAAGAAATAGCGTTGTTAACGTGAAATGGAATGCCTACAATTATTGACATTCAATTTTTATCCTTTTCTATAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGGTACAATTTTTATTTACTTATTTTAATTATTTGGCATTGGTTCTCTCGTGAGTGTTAGCTGACATAATTTACTTCTGTCTTATCACATGGCTTATGGATTAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGGTGAGGGATTGATATTACATTATACATTCCTTTGGTTGGGAGTTCTGCTGGGGCAGTTATTTTACTTGATCATTCTATTTATTCAATCATAATGCACTTTAATTTTGATAAATCATGGTACAATTTAGCCTATAGTAGATATCTGGTTTAAGTTAAAAAATAAGTTTAGTTGAATTTGTAGTTACTTTTTGTCCTAAGCTACCTGAAACCTTTTGTCAACAATGTCAAGGATGTCCCCAATTGTTACAGATTTTGAATTAATGAGATTCTTTTGACTGACATTTATTTTTATAAATTACTTTGAGCCTTCTCCAATCACCATTTTGTCTTTCACTGAGAGTCTGAGATAAATACATGTCCATTATTTTTAGGATTTGTCCTCAGTTGTAAAATTTCAGAAATGATAATCATGTCATTCTTGTTTCAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGGTAAGGATTTAACGTTTATTCATTGAAAAACTAAGTGTTTGGTATTAATAGCTAAGGAGACACATGTAATATAATAATCTGTCAATTAGATACAGAAGATGGTGATACTATGATTCATATTTTCAATATTCATTTCACATTTACTATAGGAATTGTTTTCTGCTAGCCATTGGCCCATTTGTTTGTTTAGAAAGTTAAATTTTCTTTCATTCATTTGGTAAAGTGTATTTGTAAAAGTAAGAGTCAATCTACAGAAATGTTAACATCTCTGGAGCTGCTAAGGAAATTCCATTCTAAAAATCTTGGAATTGGGAACATACCTAAACTTTTTGATTGGGTTGATTAAACTTTATTCTCTACCTACATGGATTATGCATTACTTTCAACACTCCAAATTCATACGAAGGATTAATAAATGAACATACGTAATACCTATGGTTTTAAAAATGTGAGTGTTTGAAAGCAAGCACAAAAGTTATTCAAGGCTTAAGTATGGGGCTGAACTTTTCTTGTGAGGTGTGCAATGGAAAATGTAGGTAAATTTTTATATATACACTAAAATATATATTTATATTAATAAGATCAGGAATGTCTTAAAAGTAGTTTTTTAGGAGATCATTGAGAGGAATGGAACTTTCTAGAATTATTTATTGATTTCATAATAACAAGTCTGATAATTAACAAACAAAAAATTGAAGTTTAAGCACGGCTCAACTAGACTTTTCTTGTGAGGTGCACAATAAAATAGAAGAATATAGATAGTTTTATATATATGCTAAAATGTAAGGATATGAAACCCTGATCCTTTGGAGGGGGGTGCAAGTCTTTCTTTCATAATTTGGTTCATCCTTCTCCCCTTGGTATGTTGGTTTTTGGTGCTTTGAAGGATTAGTATTCCAAGGAAAGTGAGATTCTTTACATGGAAATTTTTACACGGTTGTGCTAACATGATGAATTGGGTTTAGAGGAAGCTTCCCCTTGCTTGTTGGTCATTTCTATTGCTTTCTTTGTCGAAAGGTGGAGGAAGAGCTGGACCATATGCTTTGACGTTCCAAGTTGGCTAGTTCAGTCTGGGATTCTTTCTATCATACATTTGGCATTGTGGTTGCTTGTCAGAAGGATGTTTGTGCAATGATTGAGGAGTTCCTACTCAACCCACTTTGTGGGGGTGAGGTCACTTTCTTTAGTTTTCAGGGATGTCTGCTATTTTGTGAGTTTTGTGGGGCGAGTGGCATAGTAGAACTAGAGATTTGCTCTCTTGTTTGTTTTCATGTTTCTTTGTGGACTTCAATTTTAAAGGCTTTCTGTAACTGTTCTATAGGTGTTATTTTGCGTAGTTGGAGTTTCGTTTTATAGAGAGTTTATTTTATTGGTATTCCTTTCCTTTTTTTCTCTTGAAAGTGGTTATCTCATAATATATATATACAGTGTTCTAAAACCCCTCTCGGGTGCTCACCTAGACTCAAGGATGATATTTGAACGTCAAGAACAACTGATAAATATTGTTTAAATTGTTGTGGCTTTGTATTGATCATCCATTAGGGAAATACAGAGCACAAATCTGCCTAATGTTTTATATGATGGTTCATGACCACACGATATACCTGTATCTTTTTCTTAAAAAAATTTAATTTCAATATAGATGATGCGAATATAAATTATTTACCAAATATCAATAGTACTTGCTCTTTCCAGGTGGTAAACGAACCAGCAGATGTTCACTTTCCCGTTGTGGAGATGGCTACTCGGTCAAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGAATAGTAACTGTCTGGGATGTTAATACTCGTCAGGTGGTGGCCATTATCTATTTAAAGTTTTCTTAGTTTGTCGATTATCTCCATTATTTGGTCAGACCTCTCTTTTTTAACCCGCTCTTTACATTTTAGAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTGGTATCGGGCAGTGATGACTGTAAGGTATTTGATTGAAGCAAACACTATTTTGAGTTGGTTAAGATTATTGATTCAAAATGAGCAATTCCCTAATTTCTGTATTGCAATATTTTTCGTCTTTTTCAATAGTTAAATTTGTAGCAGAGGATATTTGACTTGTCAGCTCTGGCACTTGGAAAATGCTATCCTTTGTTGAGTGGTATCTGTCAATTCGCCAATATAATTTTGGATCCATGCTGAAACTGTTTCACATGATTTGTAGAAATTCTCCAATACAATGTTGTATTACTCATGTCTGGGTCAAAGGGTTAATAGTTTGTCTGTTGTGGGTGGTTTTTTCTTAAACAAGTTCTTTTCCTGCATACTAACTTCAAGTTACAACACTAGGTTCTTTCAATCATTCTTTTTTCTGATACTATTCTCAGGTGCATTGCTCTTTTTCTTTTAACAGGTCAAAATTTGGTGCACAAGACAGGAAGCTAGTGTGTTTAACATCGATATGAAAGCAAATGTTTGCTCAGTCAAGTACAACCCAGGATCTAGCTTATACGTAGCTGTATGTCTATTTTGGTCTCTTTACACAAATATCATAGCTACAGATTTACCAACTATCGTGAACACCCTTTGGCAAATCCTTCTCTCCCTAATACTAAAGTGTTTTCAGGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAACCGCTGCATGTTTTTAATGGCCATAAGAAGGCTGTTTCTTATGTGAAATTCTTGTCGAACAATGAACTTGCTTCTGCATCAACTGACAGCACTTTGCGGTTGTGGGATGTAAAGGAAAATTTGCCTGTGAGTTATCTTCTTGATATGTTATCCATTGACATCCAAAATGAAGTTGTTAATCTTATGAAATTGTGCTCCTTGTTCCCTCTTTTTTGTCACTCAATAATCTTTCTTGCCAATTCCCACAACTGGTTTGAAAACCAAAGCATTAAACCATTTGAAAATTTGCTAAACTTAAACTTTTTCGCAAAGGACATGGTGTGGTTATTGTGCTTTCTGGAACTAGGGATCTTGTCATTGTTATGGCTTAGACACCTTTTCTTCTCTTTCTCTCTTCTCTCTGACTTCTATAAAATTGAGAACCGTTCTCTCTGTTAAGCACATTTAGACGGTTATGGAGAAGGAGAACTAACATATTTTATATAACATGTTTGGGAGGGGTTATGAACGGTTGAAGTCACTTTTGTCCTTTTCAAAATTACTCTTGAAATGGTTTTCAATCATTGAAAATTCAACTTTAACAGCATGACATTTGCATTTAAAGTGTAAAGTTGAATTAAGTTTGAGTGATTGAAGGTGTGTTTCAAGGTGATTTTGTCTCAACCAATATAGAGCTAAAGTGTACAAGTACTGATTCATCTCTTTTATAATTATTTCAGATTTGTGTGTATAGAGGACACACAAACGAGAAGAATTTTGTGGGTCTAACAGTCAACAGTGAATACATAGCATGCGGCAGTGAAACTAATGAAGTTTTCATTTACCACAAGGTTATCATTTTTATTATTTCACCATCTTGTTTTCAACTACATAAACTTTTGCTTTTGATATGAATATTATCAAGTATCAAGTTAGTAAAAGGGAATTTACTTGCAGGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAACGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAAAGTGATAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTACTTGCACCCTAAATATCACAATAAACTTGAGAGAAAGAGAAGACAAGGAAAGTATAATAAGGTAACAAAACTCATCGCCCTCAGTCCGTGTATATGGTGATATTGATATTACTTCCATGTATATCAGCTTGTAAATTTGGTTTTCATTCAACTTCTGTGGAAAGGGTGGATTATGCAATGCTATGTGGACTCCATCTCCTCACTTAGATATATTTTTCTCTTTTTTTTCTCTTTTTTTTTTTTTTGGGTTAGGGTTAGTGGGAATATTGGTAGAAATATGTGATTATTTGCAAGCTAAGTTTAGAATGAATATTTGTTGGAGAGTTGAAAAGAGTTCAATACGTAGTTTGAAATACTGAAAATGCTTGTATATTATACTATTGGACTTTGATGGGGAGAGACCAAATGTAGAGATTCATAAATACTTAGAACTTATGTAAAGGAAATGAAATGAAATTTAAACTTGATTATTGTCATTCAATTTT

Coding sequence (CDS)

ATGCCTCCTCAATTCCAACCCGACGCTGCCAATGCTGCTGCTCCTACTCCCACTCCCACTCCCACTACCGCCCCCTCTCATTCTAATACCGATGATTTGGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAGGATGCCTTCCTCACTACTTGTGGACATAGCTTTTGTTATATGTGTATTGTTACTCATCTTCGTAATAAGAGTGATTGCCCTTGTTGCGCTCATTTTCTCCGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGTTGTTAAAGAAAACTTCTGCTCGTCAGATAAAGAAGACTGCATCCCCATTTGGATATCTTCAACAGGCATTACAAAAGGGATGTGACATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGGTGGAGGAAGAGCTGGACCATATGCTTTGA

Protein sequence

MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEELDHML

Homology

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.3e-125
Identity = 232/366 (63.39%), Postives = 287/366 (78.42%), Query Frame = 0


Query: 32  DLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILL 91
           DLDKD LCPICMQIIKDAFLT CGHSFCYMCI+THLRNKSDCPCC H+L ++++FPN LL
Sbjct: 40  DLDKDFLCPICMQIIKDAFLTACGHSFCYMCIITHLRNKSDCPCCGHYLTNSNLFPNFLL 99

Query: 92  DKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNM 151
           DKLLKKTS RQI KTASP  + +QA+QKGC++++K+L+ LL LLTEKKRKMEQEEAE NM
Sbjct: 100 DKLLKKTSDRQISKTASPVEHFRQAVQKGCEVTMKELDTLLLLLTEKKRKMEQEEAERNM 159

Query: 152 QILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDT 211
           QILL FL+CLRKQK++EL E+Q DL +IKEDI +VEK R++LYR+++RYS K++ML DD+
Sbjct: 160 QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLYRARDRYSVKLRML-DDS 219

Query: 212 VSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGP--LRKDAYCSS 271
              KSR S +D + +G+ S     +G +SSG S   + D K Q+SS G    R+D    S
Sbjct: 220 GGRKSRHSSMDLNSSGLASSPLNLRGGLSSG-SHTKKNDGKSQISSHGHGIQRRDPITGS 279

Query: 272 DLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSL 331
           D   + QSGL +  K+RVHTQFN+LQ+CYLQKRR    + + Q++RD  F   E Y+  L
Sbjct: 280 DSQYINQSGLALVRKKRVHTQFNDLQECYLQKRRQAADKPHGQQERDTNFISREGYSCGL 339

Query: 332 EDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEF 391
           +DFQSVLT+F RYSRLRVIAE+ HGD+FHS NIVSSIEFDRDD+ FATAGVSR IKVF+F
Sbjct: 340 DDFQSVLTTFTRYSRLRVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDF 399

Query: 392 SSVEEE 396
           S+V  E
Sbjct: 400 SAVVNE 403

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 1.4e-122
Identity = 234/404 (57.92%), Postives = 290/404 (71.78%), Query Frame = 0


Query: 9   AANAAAPTPTPTPTT------APSHSNTD-----------DLDKDMLCPICMQIIKDAFL 68
           + +   P   P P T      A  H N D           DLDKD+LCPICMQIIKDAFL
Sbjct: 5   STDPVVPAVKPDPRTSSVGEGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFL 64

Query: 69  TTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFG 128
           T CGHSFCYMCI+THLRNKSDCPCC+  L +N ++PN LLDKLLKKTSAR + KTASP  
Sbjct: 65  TACGHSFCYMCIITHLRNKSDCPCCSQHLTNNQLYPNFLLDKLLKKTSARHVSKTASPLD 124

Query: 129 YLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNE 188
             ++ALQ+GCD+SIK+++ LLTLL E+KRKMEQEEAE NMQILL FL+CLRKQK++ELNE
Sbjct: 125 QFREALQRGCDVSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNE 184

Query: 189 IQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG 248
           +Q DL YIKEDI++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G NS 
Sbjct: 185 VQTDLQYIKEDINAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNSN 244

Query: 249 AQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQF 308
           +   +G    GN  N + + K Q SS G  +KDA   SD  S+ QS +++A K+R+H QF
Sbjct: 245 SLSIRGGNFVGNYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQF 304

Query: 309 NELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAEL 368
           N+LQ+CYLQKRR    Q   +++ D      E Y+  L DFQSVLT+F RYSRLRVIAE+
Sbjct: 305 NDLQECYLQKRRQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEI 364

Query: 369 PHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 396
            HGD+FHS NIVSSIEFDRDDE FATAGVSRCIKVF+FSSV  E
Sbjct: 365 RHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNE 406

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.6e-36
Identity = 117/385 (30.39%), Postives = 190/385 (49.35%), Query Frame = 0


Query: 31  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 90
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 128 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 187

Query: 91  LLDKLLKKTSARQIKK-------TASPFGYLQQALQK--GCDMSIKDLEE---LLTLLTE 150
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 188 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDWLGTDQDNLDLANVNLMLELLVQ 247

Query: 151 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 210
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 248 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 307

Query: 211 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 270
              SG    +++D+        + S SS+ID          + SQ    SG+S       
Sbjct: 308 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGSSQT----- 367

Query: 271 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 330
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 368 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 427

Query: 331 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GDLFHSPNIVSSIEFDR 390
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++  +IVSSIEFDR
Sbjct: 428 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 456

Query: 391 DDEFFATAGVSRCIKVFEFSSVEEE 396
           D ++FA AGV++ IKV+E+ +V ++
Sbjct: 488 DCDYFAIAGVTKKIKVYEYDTVIQD 456

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 152.5 bits (384), Expect = 9.9e-36
Identity = 117/385 (30.39%), Postives = 189/385 (49.09%), Query Frame = 0


Query: 31  DDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRS-NSIFPNI 90
           +D   D +CPIC  +I++A++T CGHSFCY CI   L + + CP C + + + + ++PN 
Sbjct: 130 EDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNIDHLYPNF 189

Query: 91  LLDKLLKKTSARQIKK-------TASPFGYLQQALQK--GCDMSIKDLEE---LLTLLTE 150
           L+++L+ K   R  +K        +S  G+  Q  Q   G D    DL     +L LL +
Sbjct: 190 LVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLANVNLMLELLVQ 249

Query: 151 KKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSK 210
           KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++EDI  VE+         
Sbjct: 250 KKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEM-------- 309

Query: 211 ERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 270
              SG    +++D+        + S SS+ID          + SQ    SG S       
Sbjct: 310 ---SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQPPGFSGTSQT----- 369

Query: 271 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 330
                     +K  + +S L S          ++R+   F +L+ CY   R +       
Sbjct: 370 ----------KKQPWYNSTLAS---------RRKRLTAHFEDLEQCYFSTRMS------- 429

Query: 331 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GDLFHSPNIVSSIEFDR 390
                 + S        L++FQ  L+ F RY+ +R +A L +  DL++  +IVSSIEFDR
Sbjct: 430 ------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDR 458

Query: 391 DDEFFATAGVSRCIKVFEFSSVEEE 396
           D ++FA AGV++ IKV+E+ +V ++
Sbjct: 490 DCDYFAIAGVTKKIKVYEYGTVIQD 458

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot
Match: Q94BM7 (Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 6.1e-09
Identity = 66/263 (25.10%), Postives = 116/263 (44.11%), Query Frame = 0


Query: 135 LTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELY 194
           L E++  ME  +     ++LL FL+ ++++K E  +++Q  +  +  DI  V K++L L 
Sbjct: 275 LEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQ 334

Query: 195 ---RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 254
              R    +    K +     +T +     +   N I+  ++      S+          
Sbjct: 335 QKGRDVRSFLASRKRIRQGAETTAAEE---ENDDNSIDEESKLDDTLEST---------- 394

Query: 255 KIQLSSQGPLRKDAYCSSDLHSV--AQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQL 314
              L S   +R      S   +    Q     A ++ +   ++ L        ++   Q 
Sbjct: 395 --LLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSSEKSSMSQP 454

Query: 315 YKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFD 374
            K    D +  G       ++ F   L  ++ +S+LRV A+L  GDL +S N+V +I FD
Sbjct: 455 SKDPINDSRQGGW------IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFD 514

Query: 375 RDDEFFATAGVSRCIKVFEFSSV 393
           RD EFFATAGV++ IK+FE  S+
Sbjct: 515 RDGEFFATAGVNKKIKIFECESI 516

[Close]

BLAST of Cucsat.G21587.T6 vs. NCBI nr
Match: XP_004145465.3 (E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypothetical protein Csa_007625 [Cucumis sativus])

HSP 1 Score: 780 bits (2013), Expect = 7.94e-280
Identity = 393/395 (99.49%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 60
           MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY
Sbjct: 1   MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 60

Query: 61  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 120
           MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG
Sbjct: 61  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 120

Query: 121 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 180
           CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK
Sbjct: 121 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 180

Query: 181 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 240
           EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS
Sbjct: 181 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 240

Query: 241 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 300
           SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ
Sbjct: 241 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 300

Query: 301 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 360
           KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP
Sbjct: 301 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 360

Query: 361 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 361 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 395

[Close]

BLAST of Cucsat.G21587.T6 vs. NCBI nr
Match: XP_008458987.1 (PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 732 bits (1889), Expect = 2.56e-260
Identity = 372/393 (94.66%), Postives = 378/393 (96.18%), Query Frame = 0


Query: 3   PQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 62
           PQF P+ ANAAA TPTP  T A SHS+TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC
Sbjct: 48  PQFLPEDANAAAATPTP--TAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 107

Query: 63  IVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCD 122
           IVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGYLQQALQKGCD
Sbjct: 108 IVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCD 167

Query: 123 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 182
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 168 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 227

Query: 183 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 242
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 228 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 287

Query: 243 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 302
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 288 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 347

Query: 303 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 362
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 348 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 407

Query: 363 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 408 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 438

[Close]

BLAST of Cucsat.G21587.T6 vs. NCBI nr
Match: XP_031735991.1 (E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus])

HSP 1 Score: 727 bits (1877), Expect = 3.28e-259
Identity = 370/384 (96.35%), Postives = 371/384 (96.61%), Query Frame = 0


Query: 12  AAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS 71
           A  PT    P+T  S   TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS
Sbjct: 8   ALVPTVKTEPSTLDSTPYTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMCIVTHLRNKS 67

Query: 72  DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL 131
           DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL
Sbjct: 68  DCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEEL 127

Query: 132 LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL 191
           LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL
Sbjct: 128 LTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRL 187

Query: 192 ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 251
           ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA
Sbjct: 188 ELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADA 247

Query: 252 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 311
           KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK
Sbjct: 248 KIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYK 307

Query: 312 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD 371
           QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD
Sbjct: 308 QEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRD 367

Query: 372 DEFFATAGVSRCIKVFEFSSVEEE 395
           DEFFATAGVSRCIKVFEFSSV  E
Sbjct: 368 DEFFATAGVSRCIKVFEFSSVVNE 391

[Close]

BLAST of Cucsat.G21587.T6 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 722 bits (1864), Expect = 1.35e-256
Identity = 368/395 (93.16%), Postives = 373/395 (94.43%), Query Frame = 0


Query: 1   MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 60
           MPPQF+P  ANAAAP          S SNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY
Sbjct: 48  MPPQFEPGDANAAAPA---------SQSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 107

Query: 61  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 120
           MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKK+ S FGYL QALQKG
Sbjct: 108 MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKSTSQFGYLHQALQKG 167

Query: 121 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 180
           CDMSIKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK
Sbjct: 168 CDMSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 227

Query: 181 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 240
           EDISSVEKQRLELYRSKERYSGKMKMLADDT+STKSRSSLIDKHGNGINSGAQRSQGW+S
Sbjct: 228 EDISSVEKQRLELYRSKERYSGKMKMLADDTISTKSRSSLIDKHGNGINSGAQRSQGWVS 287

Query: 241 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 300
           SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ
Sbjct: 288 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 347

Query: 301 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 360
           KRRNWRKQLYKQEDRDIKFS GESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS 
Sbjct: 348 KRRNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSA 407

Query: 361 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 408 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 433

[Close]

BLAST of Cucsat.G21587.T6 vs. NCBI nr
Match: TYK12320.1 (E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 716 bits (1848), Expect = 1.22e-253
Identity = 372/423 (87.94%), Postives = 378/423 (89.36%), Query Frame = 0


Query: 3   PQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 62
           PQF P+ ANAAA TPTP  T A SHS+TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC
Sbjct: 48  PQFLPEDANAAAATPTP--TAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 107

Query: 63  IVTHLRNKSDCPCCAHFLRSNSIFPNILLDK----------------------------- 122
           IVTHLRNKSDCPCCAHFLRS SIFPNILLDK                             
Sbjct: 108 IVTHLRNKSDCPCCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNCLLGLKRKMQK 167

Query: 123 -LLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQ 182
            LLKKTSARQIKKT SPFGYLQQALQKGCDM+IKDLEELLTLL EKKRKMEQEEAETNMQ
Sbjct: 168 KLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQ 227

Query: 183 ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTV 242
           ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTV
Sbjct: 228 ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTV 287

Query: 243 STKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH 302
           STKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH
Sbjct: 288 STKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH 347

Query: 303 SVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDF 362
           S+AQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNP+LEDF
Sbjct: 348 SIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDF 407

Query: 363 QSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV 395
           QSVLTSFMRYSRLRVIAEL HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV
Sbjct: 408 QSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV 467

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL
Match: A0A0A0LYH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1)

HSP 1 Score: 780 bits (2013), Expect = 1.97e-279
Identity = 393/395 (99.49%), Postives = 393/395 (99.49%), Query Frame = 0


Query: 1   MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 60
           MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY
Sbjct: 47  MPPQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCY 106

Query: 61  MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 120
           MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG
Sbjct: 107 MCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKG 166

Query: 121 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 180
           CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK
Sbjct: 167 CDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIK 226

Query: 181 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 240
           EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS
Sbjct: 227 EDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMS 286

Query: 241 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 300
           SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ
Sbjct: 287 SGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 346

Query: 301 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 360
           KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP
Sbjct: 347 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 406

Query: 361 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 407 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 441

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 732 bits (1889), Expect = 1.24e-260
Identity = 372/393 (94.66%), Postives = 378/393 (96.18%), Query Frame = 0


Query: 3   PQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 62
           PQF P+ ANAAA TPTP  T A SHS+TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC
Sbjct: 48  PQFLPEDANAAAATPTP--TAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 107

Query: 63  IVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCD 122
           IVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGYLQQALQKGCD
Sbjct: 108 IVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCD 167

Query: 123 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 182
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 168 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 227

Query: 183 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 242
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 228 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 287

Query: 243 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 302
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 288 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 347

Query: 303 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 362
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 348 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 407

Query: 363 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 408 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 438

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 732 bits (1889), Expect = 1.24e-260
Identity = 372/393 (94.66%), Postives = 378/393 (96.18%), Query Frame = 0


Query: 3   PQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 62
           PQF P+ ANAAA TPTP  T A SHS+TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC
Sbjct: 48  PQFLPEDANAAAATPTP--TAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 107

Query: 63  IVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIKKTASPFGYLQQALQKGCD 122
           IVTHLRNKSDCPCCAHFLRS SIFPNILLDKLLKKTSARQIKKT SPFGYLQQALQKGCD
Sbjct: 108 IVTHLRNKSDCPCCAHFLRSTSIFPNILLDKLLKKTSARQIKKTTSPFGYLQQALQKGCD 167

Query: 123 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 182
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 168 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 227

Query: 183 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 242
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 228 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 287

Query: 243 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 302
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 288 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 347

Query: 303 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 362
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 348 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 407

Query: 363 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 408 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 438

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL
Match: A0A5D3CLL8 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00900 PE=4 SV=1)

HSP 1 Score: 716 bits (1848), Expect = 5.89e-254
Identity = 372/423 (87.94%), Postives = 378/423 (89.36%), Query Frame = 0


Query: 3   PQFQPDAANAAAPTPTPTPTTAPSHSNTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 62
           PQF P+ ANAAA TPTP  T A SHS+TDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC
Sbjct: 48  PQFLPEDANAAAATPTP--TAAASHSDTDDLDKDMLCPICMQIIKDAFLTTCGHSFCYMC 107

Query: 63  IVTHLRNKSDCPCCAHFLRSNSIFPNILLDK----------------------------- 122
           IVTHLRNKSDCPCCAHFLRS SIFPNILLDK                             
Sbjct: 108 IVTHLRNKSDCPCCAHFLRSTSIFPNILLDKITNRMQCSFKAQGAIKRNCLLGLKRKMQK 167

Query: 123 -LLKKTSARQIKKTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQ 182
            LLKKTSARQIKKT SPFGYLQQALQKGCDM+IKDLEELLTLL EKKRKMEQEEAETNMQ
Sbjct: 168 KLLKKTSARQIKKTTSPFGYLQQALQKGCDMTIKDLEELLTLLAEKKRKMEQEEAETNMQ 227

Query: 183 ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTV 242
           ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL+RSKERYSGKMKMLADDTV
Sbjct: 228 ILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELHRSKERYSGKMKMLADDTV 287

Query: 243 STKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH 302
           STKSRSSLIDKHGNGINSG QRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH
Sbjct: 288 STKSRSSLIDKHGNGINSGVQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLH 347

Query: 303 SVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDF 362
           S+AQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNP+LEDF
Sbjct: 348 SIAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPALEDF 407

Query: 363 QSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV 395
           QSVLTSFMRYSRLRVIAEL HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV
Sbjct: 408 QSVLTSFMRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV 467

[Close]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 689 bits (1778), Expect = 6.11e-244
Identity = 352/411 (85.64%), Postives = 363/411 (88.32%), Query Frame = 0


Query: 6   QPDAANAAAPTPTPTPTTAP---------------------SHSNTDDLDKDMLCPICMQ 65
           +P AA++ AP P P P   P                     S +N++DLDKDMLCPICMQ
Sbjct: 16  EPSAADSTAPPPPPPPLPPPPPPPPEAMAAELEAGELNATASEANSEDLDKDMLCPICMQ 75

Query: 66  IIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCAHFLRSNSIFPNILLDKLLKKTSARQIK 125
           IIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCC HFLRSNSIFPNILLDKLLKKTSARQIK
Sbjct: 76  IIKDAFLTTCGHSFCYMCIVTHLRNKSDCPCCGHFLRSNSIFPNILLDKLLKKTSARQIK 135

Query: 126 KTASPFGYLQQALQKGCDMSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQ 185
           KT SPFGYL QALQKGCDMSIK+LEEL+TLL EKKRKMEQEEAETNMQILLGFLYCLRKQ
Sbjct: 136 KTTSPFGYLHQALQKGCDMSIKELEELVTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQ 195

Query: 186 KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKH 245
           KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKML DDTVSTKSRSSLIDKH
Sbjct: 196 KLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLVDDTVSTKSRSSLIDKH 255

Query: 246 GNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANK 305
           GNGIN G QRSQGWMSSGNS NPRAD KIQL SQGPLRKDAYC SDLHSVAQSGL VANK
Sbjct: 256 GNGINCGTQRSQGWMSSGNSANPRADVKIQLGSQGPLRKDAYCGSDLHSVAQSGLAVANK 315

Query: 306 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSR 365
           RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRD KF+ GESYNP+L+DFQSVLTSFMRYSR
Sbjct: 316 RRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDTKFNSGESYNPALDDFQSVLTSFMRYSR 375

Query: 366 LRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVEEE 395
           LRVIAEL HGDLFHS NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSV  E
Sbjct: 376 LRVIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNE 426

The following BLAST results are available for this feature:

BLAST of Cucsat.G21587.T6 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93471	2.3e-125	63.39	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
P43254	1.4e-122	57.92	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
Q8NHY2	7.6e-36	30.39	E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1	[more]
Q9R1A8	9.9e-36	30.39	E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2	[more]
Q94BM7	6.1e-09	25.10	Protein SPA1-RELATED 4 OS=Arabidopsis thaliana OX=3702 GN=SPA4 PE=1 SV=1	[more]

BLAST of Cucsat.G21587.T6 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145465.3	7.94e-280	99.49	E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypo...	[more]
XP_008458987.1	2.56e-260	94.66	PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3...	[more]
XP_031735991.1	3.28e-259	96.35	E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus]	[more]
XP_038894733.1	1.35e-256	93.16	E3 ubiquitin-protein ligase COP1-like [Benincasa hispida]	[more]
TYK12320.1	1.22e-253	87.94	E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G21587.T6 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYH0	1.97e-279	99.49	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1	[more]
A0A5A7TIH5	1.24e-260	94.66	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C954	1.24e-260	94.66	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE...	[more]
A0A5D3CLL8	5.89e-254	87.94	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CL47	6.11e-244	85.64	E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 125..152
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 39..76 e-value: 1.9E-10 score: 40.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..251
None	No IPR available	PANTHER	PTHR44080:SF2	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 20..395
None	No IPR available	CDD	cd16504	RING-HC_COP1	coord: 35..80 e-value: 1.85018E-21 score: 84.6173
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 31..97
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 39..76 e-value: 6.9E-7 score: 38.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 39..76 score: 11.987676
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 330..399 e-value: 2.7E-17 score: 64.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 18..151 e-value: 1.3E-19 score: 72.2
IPR042755	E3 ubiquitin-protein ligase COP1	PANTHER	PTHR44080	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 20..395
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 54..63

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G21587	Cucsat.G21587	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T6.E1	Cucsat.G21587.T6.E1	exon
Cucsat.G21587.T6.E2	Cucsat.G21587.T6.E2	exon
Cucsat.G21587.T6.E3	Cucsat.G21587.T6.E3	exon
Cucsat.G21587.T6.E4	Cucsat.G21587.T6.E4	exon
Cucsat.G21587.T6.E5	Cucsat.G21587.T6.E5	exon
Cucsat.G21587.T6.E6	Cucsat.G21587.T6.E6	exon
Cucsat.G21587.T6.E7	Cucsat.G21587.T6.E7	exon
Cucsat.G21587.T6.E8	Cucsat.G21587.T6.E8	exon
Cucsat.G21587.T6.E9	Cucsat.G21587.T6.E9	exon
Cucsat.G21587.T6.E10	Cucsat.G21587.T6.E10	exon
Cucsat.G21587.T6.E11	Cucsat.G21587.T6.E11	exon
Cucsat.G21587.T6.E12	Cucsat.G21587.T6.E12	exon
Cucsat.G21587.T6.E13	Cucsat.G21587.T6.E13	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T6.C8	Cucsat.G21587.T6.C8	CDS
Cucsat.G21587.T6.C7	Cucsat.G21587.T6.C7	CDS
Cucsat.G21587.T6.C6	Cucsat.G21587.T6.C6	CDS
Cucsat.G21587.T6.C5	Cucsat.G21587.T6.C5	CDS
Cucsat.G21587.T6.C4	Cucsat.G21587.T6.C4	CDS
Cucsat.G21587.T6.C3	Cucsat.G21587.T6.C3	CDS
Cucsat.G21587.T6.C2	Cucsat.G21587.T6.C2	CDS
Cucsat.G21587.T6.C1	Cucsat.G21587.T6.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T6	Cucsat.G21587.T6-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0046872	metal ion binding