Cucsat.G21587.T13 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G21587.T13
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	E3 ubiquitin-protein ligase COP1-like
Location	ctg944: 684666 .. 696388 (-)
RNA-Seq Expression	Cucsat.G21587.T13
Synteny	Cucsat.G21587.T13

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTCTACTCTCGACTCCACTCCTTCTTCTTCCCCCCCTCCTCCTCCTCCTTTGCCTCCCCTCCCCCTCCCCTCCTCCCTCCGACCTAATGCCTCCTCAATTCCAACCCGACGCTGCCAATGCTGCTGCTCCTACTCCCACTCCCACTCCCACTACCGCCCCCTCTCATTCTAATACCGATGATTTGGATAAGGATATGCTTTGCCCTATTTGCATGCAGATCATTAAGGATGCCTTCCTCACTACTTGTGGACATAGCTTTTGTTATATGTGTATTGTTACTCATCTTCGTAATAAGAGTGATTGCCCTTGTTGCGCTCATTTTCTCCGGAGTAACAGCATTTTCCCCAATATTTTGCTTGATAAGGTTTGATCATCTTCATTTCTTTTTTTCTTTTTTATTTCACTTCTTTCTTCAATTGGATCTTCATTCCTTTCTTTTTCTTTTTCAATTTTATTTCCTCTCCCTATTTAATTTTACGCCATTTTTTAGTTGATAATCACATCTTAGTTTGTAGTTTTCAAGTATTTATGGGTCACTCAGTGCCTAAGATTTCGACACTTTGACTGTTGTTGCATTGGAGACTGTTATATACTGTGAGAGATTGATTGTTTAATGCTTTTTTTTTTATATAATAATTAAGTCATTCCATTATGCCCGAGATTATCTTTCTTTAATTTCATTGATTTTTGCTGGTCTTCCCCTAGATCTGTGCAGTTCCTTAGGATATTTTTGTTATGCAATCTAGATTCTATATGTATGTTTGCTAATTTTTTTGACATTTGTTTTTTGGAAAATTGTTTATGGAATCTGTGGTCCTAATAGTGAATGTCTAAGTGTATCTTGATTTGGAGTTGAAAATATTATACAGTAGAGTTACATTAAAAAAAACAGAAAGTATAAACTTCTATATATAGTCTTTCATGTTATAAACTGTTTTTAGTTTTGTAAAAAATAAATAGTATCGCATACTATACTAAAAATTTTTAGATATTTAAAATAATAGTTATACAGAATTTACATGTTCATTAATTTTAGATATAATCATGATCTGTGATTCTGTTTTATAGGTTGCTATACATGAATTACATGTTCATTAATTAATAATAATAGATGAGATTTAATAATATAATAATTTTGTTACTCGAGCTATTCTTGTGGTTTATAAAATATATTATCAACACATTATGAACATTTTCTTATTTTGGAATCCAATTTTGAAATATGCTGCAAAATACATCCAAAAGTATTGAAAACATGAAATACATTTTTTTAATTGAAAACACATTTTTTTTTAAATTGAAAACACATTTTTTTAATTGAATCTCTTGTTGTTAAATATTTAAAGTTTAAGGGGCAATAAAGACTTAAGCGCAAGATGCAAAAGAAAGTGTGGACTTTTTTTTTATGGGGAGTATATATAAAAGTACTACATTAAGAAGAGAAAGCAAATCATAATTGAAGTGGAAATATGAAAAACAAAAAAAAAAAAGATCCCTTAACGCAAGACATTTTGGATTTAGGCTTAGTAAATTTAATTTTTCTAATTAATAAATAAGGAAAACCCCTAATTATTGCTGTTTAAAAAAACAATAATAAAGCCCCAAGGTGTAGGGCTTTGAGCCTTAGGGCTTCATAATGAAAGGCTGTGCCTGAGGCACGCCTTATTTTGTGAGCCTCACCTTTCAAGGCAAGGCACCAGTCCTAGACCTTGAGCCTAGGCACGGACCTCAGAGCGCTTTTCAAAACACTGACCATATGTAGCTTTACCTTACATTCCGAGCAAAACTGTCTTGCATGTCAGCTGAGCTATGGCTTTACAATTTGTGACCTAGGCTACTTACATGGTAGAAGTTCCCAAAATCTTCATTGTGCAGTAGTTTAGCTTGATGCTAAAGTATTGTAATGTTTTATATTTAGTGTCTGATGCAATGTTAATTTTCCAATTATGCTGATGATACCTTGATCACATATTCATTTCAACTGGATTATGCAATGTTGCAATCATAAAAAGGGGGACTCTTTTTCAAAATAAATAAATAAGGGGTTGAATTTCCAATTTGACCTTATGGTTTGGAGAAAGTTAAAATTTAGTCCATGTGGTTTTAACAAACCATGGAGGATAAATTGAAGTTATATGGACTGAATTCTAACCTTTTTGAAGGACCAAGTTTGTAAATTAACCTAAATAATAATTATGCAATGAAACAAATCAACACTCTTTTTTAGAATATTTCAGTTCAAACAAGGAGTAAGGATTCACATCTGGAAGGGAGGTTTTCCAGTGTCTTGAGTAGTTGAACTGTTCAAGTTGGTTTTTATAATTGGATATTTTTGGCTCTAATATTTCAGTGATATTATGGAAGCTTCATGTTTTGTTGAAACTAAATTCTTATGCCCTTGTCTCTGACTTTATTTCTATTGATTGTGTCATTTCTATTGATTGTGTCATGATGTTTTTGTAATTCTGAATTGCAATCTTGAATTATGAGATTGATGCATCTTCATGGTTTCTTGCAATCATTTTTGCAGTTGTTAAAGAAAACTTCTGCTCGTCAGATAAAGAAGACTGCATCCCCATTTGGATATCTTCAACAGGCATTACAAAAGGTCAGCACAATTTCCATTACAATATATATACATATATTTTCTTTTTCAGAATTACAACTCACCATCACTCCAGTATGGAAAATGAACTTTAAAAGGTGTGCATCATTACCTTCAACATAGGGTTTGAGGACAATAAAGTTTTCTTAGTTGACTGTCATACTATTATTTCCACATTTGCTAATCTATGGATTTTAGTACAAACTTCCTATCATTAATCTCCTTACTATCAACCTCATCATTAAACAAGCTGAACTTTTCCGTCTCAACTTTTTGCCAGGGATGTGACATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGGTCTCTTTTACTTTGATTGTCATTTTTTTGTTTCTTGCTTATTATAAATTGGTATATGAATTTTTCGTTACTTCAATGATGAAGAGTGTTTCTGGTTCAAAAAAAAAAAAAAAGAAAGAGCAACAAACAAACAAAAAAGGTACATGAACAAGTTTATGTGCTCTTATGGAAAAAAAGAAGTTTTTTTTCTTAGGCTTGGTTGGTTAACCTGTCCGTAATTTGATTGGCTGCTTTTCAGTGTGTAAAAAATAGTAACGACTTGATTTAATATACAGGTATGAGTAACTAATGTTTGGAATTCAAGTAAGTTTAACTTTATGAAGTTGGAAATGGACTTAATGTTACTAGAAGAAGTATAAACTACTTTGATTAATGACTAAGATTGAAGAAGTACAAACTACTTTGATTTATGACTAAGATGGAGTAAGTAGTTTAGACATAACTAAATTTGTCCAGGGCATCTAAATTCCATTTTATGGAACTCTATATTTCAATCAAGTATCGGAACAATTCTTTTAATATTCTCTAGCACATTGTTGAGTTTTTATTTTCTTTTGTTTTTTGAAACGGATACAAACTTCTTTATTGATAATAAACTCAAAGTACAAGAGAGTTATACGGTGAGAGTAATAGAGAAGCCTAGAAAGGGGAGAGAGAGCGGATTAGTAGGTGTATCTGGACATCTCAACTAGGTTGACACCCCCTTAGCACCCTCATCATATCCAAATAAAAGAAAGATACTAAGGTCATGCAAAGACTGAAAATAACAATATAAACTACCAATCTGTAGACAGATGCAAAGCTGAAAAATAATAAAACATATGGAGAGATACAAAATAAAGCAAAGCAAAACTTCAAAGAAACAAATCCTGGCCTAGCAATCTGGAAAATATCAGCCCTGATTCTCTTCAGATGAAGGCAGTCCAGTGTCTTTAACTCATTTGTAAATTCGTCCACAATTGTGCTCTCTGCCTTCATAGTAATCACCAACCATACTTTAGTATAACCTTATATGGAGTATGGCTAAGTTTAACTTACATGTGTATAGAGGGTATTATGTTTAGGGATTATGACTGTATTACTGGCATTTTAGAACGTCCGGCGTTGGTGTATGCACCAAGCATTTTCCCATTATAAATACAGAGGATCTCCCATTGATTCATTCAAGAATATCTTTTGTTGATTTGCTTCGTTATTTATTTATTTTCTCATTATAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGGTAAAACTTTTATTTCAATTTAAATTTCACTTTACAGAAAAGTTATCACAATGGTGCTAATCACAGTCTGGCTTATTAGTCAGCAAAATTGCAATGATGGAGATTTAATTAGTATACTCTGAAACAACAATCGAGGTTATTGTGAAGATTGTAGATATTTGCTTCTTGGTTCTAGTGATGTTACTTTTACAAATATCATTATGACTCTCAAGCTCTTAAGTAATCATCTTTCTATTCCATATTTTAACCAATGAATACAGTGATACTCTAGTTTTTGATTGCATACACTTAAAAATTATGTTTGTCTTTCATTTTTCCGCACTTATATAGTAAGAGGCCTCGTTGCTATTTGCCTCCTTACTGGATTTTATGAACAATGTACTGGTGAAACTCTGGAGTCTGGATTGTTATTTCTTCATTATGGTTTTGGTATGTCCATGTGGAATAAACTCCTTTTTGAAACTTTAAGTTCAATCTTCTTTCCCTAAAGTCGAGTCTTCTTTTTGTTAGATTTTGGCCTAGGACTCCTGAAAACAGCATTCCTTTTAAGGATATGTCCAATTTCAGCTATTTTGTAGGTATTATGGATTTAGCAGGATAGAAATATTTGGGAGTTGTAATAATGCTTAGGCCAAAGTCTCGGTTTCTTACCAATAAACAAGAAAATAGCTTAAGCTGAAGTGGGCAGTTAGCTTTTTTGTTTCTATCTTTTCCTGGTACGAGGAATTGACAGTCTGTTCTGCTTCTGTTGAAAGCTTCTGTTGGAGATCTTGTATTGTTGATTCTCTTTCTGTTGCTTAACCTATTTATTAATATTTGTGATATGAAAACCCAACTAATTGGAATTGAAAACCCTTTTGGGATGAGAAATCACTAAAACCCCCCAAATTAACTCGATTTCAACCTTAAGGACTGGGTTAGACATTGATTGCCTTAAAGATCAAATATCTTAAGACAAATAACACATTTCTCAATCCAAGATTCGAATACTCCACCAGATAAGATGATCAGTCTCATTTAAATGTTCTTGGAATGCAACTCAATACATGAGTTACAAAATTTAAGAAGCTCTGCTGGCTAAACTTGAAAGAAACACAAATAATCTCTCTCCAAACAACCTAATAGCAAGGCTGAAATGGCCTCCTATCATAGTGAAAAGATAAAATCCCTTACTTAATAAGTCAAAAAAAGGATATAATTGGAAAAATATTAAAATTATATCAAAATTGTTAAATTAAAATTTATTTAATAATTTGATGCTTGAGTGGTTCATATCAATTTGTTATCTGTTTTACGTTTCTATAAACAAAATATGTATTACTTTTGAATTTTGATTAAAGGATAAAATGAAGATTAAGGCATTTAATTTCTCTTTTTTTTTTTTTTTGAGAAAAAGAGAGGGATTAGGAAAATAATTTGTCACCTAAAGCAATGAGTGAGCAGGTCAGGACTTTTTGTACAATAAGGAAAGTTCGGTCAGCCTATCAGAAAAGAGCTCTTCCTAGTTTGCTCATGTCAACATCTAGTTTGGAGGAGCTGTACATTAATTTGTTTTCTTTTTCTTTCATATTGATTTATTTTGTGAAATTAGGAAACTTTTAGCTTGTCTGTGCTGATTAAATCCATCTACTGATGTTATTTTGTCAACTGTTCTTAAGTTAAAGTGCAGTCAGCCGATTAGAAAAGAGTTCTTCCTTGTTTGCTTAAGTTATGTCAACATCTTTCAAAACTTAATGGTCATTTAGTTGGGGGAGCTGTACATTAATTTATTTTCTATTTCTTTGATATTGATTTTTTTTGTGAAATTAGGCAAATTTTAGCTTGTCTGCGCTGATTAAATCCATCTAGTGATGTTATTTTGTCAACCTTTCTTAAGTTAAGAAATAGCGTTGTTAACGTGAAATGGAATGCCTACAATTATTGACATTCAATTTTTATCCTTTTCTATAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGGTACAATTTTTATTTACTTATTTTAATTATTTGGCATTGGTTCTCTCGTGAGTGTTAGCTGACATAATTTACTTCTGTCTTATCACATGGCTTATGGATTAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGGTGAGGGATTGATATTACATTATACATTCCTTTGGTTGGGAGTTCTGCTGGGGCAGTTATTTTACTTGATCATTCTATTTATTCAATCATAATGCACTTTAATTTTGATAAATCATGGTACAATTTAGCCTATAGTAGATATCTGGTTTAAGTTAAAAAATAAGTTTAGTTGAATTTGTAGTTACTTTTTGTCCTAAGCTACCTGAAACCTTTTGTCAACAATGTCAAGGATGTCCCCAATTGTTACAGATTTTGAATTAATGAGATTCTTTTGACTGACATTTATTTTTATAAATTACTTTGAGCCTTCTCCAATCACCATTTTGTCTTTCACTGAGAGTCTGAGATAAATACATGTCCATTATTTTTAGGATTTGTCCTCAGTTGTAAAATTTCAGAAATGATAATCATGTCATTCTTGTTTCAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGGTAAGGATTTAACGTTTATTCATTGAAAAACTAAGTGTTTGGTATTAATAGCTAAGGAGACACATGTAATATAATAATCTGTCAATTAGATACAGAAGATGGTGATACTATGATTCATATTTTCAATATTCATTTCACATTTACTATAGGAATTGTTTTCTGCTAGCCATTGGCCCATTTGTTTGTTTAGAAAGTTAAATTTTCTTTCATTCATTTGGTAAAGTGTATTTGTAAAAGTAAGAGTCAATCTACAGAAATGTTAACATCTCTGGAGCTGCTAAGGAAATTCCATTCTAAAAATCTTGGAATTGGGAACATACCTAAACTTTTTGATTGGGTTGATTAAACTTTATTCTCTACCTACATGGATTATGCATTACTTTCAACACTCCAAATTCATACGAAGGATTAATAAATGAACATACGTAATACCTATGGTTTTAAAAATGTGAGTGTTTGAAAGCAAGCACAAAAGTTATTCAAGGCTTAAGTATGGGGCTGAACTTTTCTTGTGAGGTGTGCAATGGAAAATGTAGGTAAATTTTTATATATACACTAAAATATATATTTATATTAATAAGATCAGGAATGTCTTAAAAGTAGTTTTTTAGGAGATCATTGAGAGGAATGGAACTTTCTAGAATTATTTATTGATTTCATAATAACAAGTCTGATAATTAACAAACAAAAAATTGAAGTTTAAGCACGGCTCAACTAGACTTTTCTTGTGAGGTGCACAATAAAATAGAAGAATATAGATAGTTTTATATATATGCTAAAATGTAAGGATATGAAACCCTGATCCTTTGGAGGGGGGTGCAAGTCTTTCTTTCATAATTTGGTTCATCCTTCTCCCCTTGGTATGTTGGTTTTTGGTGCTTTGAAGGATTAGTATTCCAAGGAAAGTGAGATTCTTTACATGGAAATTTTTACACGGTTGTGCTAACATGATGAATTGGGTTTAGAGGAAGCTTCCCCTTGCTTGTTGGTCATTTCTATTGCTTTCTTTGTCGAAAGGTGGAGGAAGAGCTGGACCATATGCTTTGACGTTCCAAGTTGGCTAGTTCAGTCTGGGATTCTTTCTATCATACATTTGGCATTGTGGTTGCTTGTCAGAAGGATGTTTGTGCAATGATTGAGGAGTTCCTACTCAACCCACTTTGTGGGGGTGAGGTCACTTTCTTTAGTTTTCAGGGATGTCTGCTATTTTGTGAGTTTTGTGGGGCGAGTGGCATAGTAGAACTAGAGATTTGCTCTCTTGTTTGTTTTCATGTTTCTTTGTGGACTTCAATTTTAAAGGCTTTCTGTAACTGTTCTATAGGTGTTATTTTGCGTAGTTGGAGTTTCGTTTTATAGAGAGTTTATTTTATTGGTATTCCTTTCCTTTTTTTCTCTTGAAAGTGGTTATCTCATAATATATATATACAGTGTTCTAAAACCCCTCTCGGGTGCTCACCTAGACTCAAGGATGATATTTGAACGTCAAGAACAACTGATAAATATTGTTTAAATTGTTGTGGCTTTGTATTGATCATCCATTAGGGAAATACAGAGCACAAATCTGCCTAATGTTTTATATGATGGTTCATGACCACACGATATACCTGTATCTTTTTCTTAAAAAAATTTAATTTCAATATAGATGATGCGAATATAAATTATTTACCAAATATCAATAGTACTTGCTCTTTCCAGGTGGTAAACGAACCAGCAGATGTTCACTTTCCCGTTGTGGAGATGGCTACTCGGTCAAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGAATAGTAACTGTCTGGGATGTTAATACTCGTCAGGTGGTGGCCATTATCTATTTAAAGTTTTCTTAGTTTGTCGATTATCTCCATTATTTGGTCAGACCTCTCTTTTTTAACCCGCTCTTTACATTTTAGAGTGTTATGGAGTACGAAGAACATGAAAAACGAGCTTGGAGTGTTGATTTTTCACGTTCTGAACCTTCCATGCTGGTATCGGGCAGTGATGACTGTAAGGTATTTGATTGAAGCAAACACTATTTTGAGTTGGTTAAGATTATTGATTCAAAATGAGCAATTCCCTAATTTCTGTATTGCAATATTTTTCGTCTTTTTCAATAGTTAAATTTGTAGCAGAGGATATTTGACTTGTCAGCTCTGGCACTTGGAAAATGCTATCCTTTGTTGAGTGGTATCTGTCAATTCGCCAATATAATTTTGGATCCATGCTGAAACTGTTTCACATGATTTGTAGAAATTCTCCAATACAATGTTGTATTACTCATGTCTGGGTCAAAGGGTTAATAGTTTGTCTGTTGTGGGTGGTTTTTTCTTAAACAAGTTCTTTTCCTGCATACTAACTTCAAGTTACAACACTAGGTTCTTTCAATCATTCTTTTTTCTGATACTATTCTCAGGTGCATTGCTCTTTTTCTTTTAACAGGTCAAAATTTGGTGCACAAGACAGGAAGCTAGTGTGTTTAACATCGATATGAAAGCAAATGTTTGCTCAGTCAAGTACAACCCAGGATCTAGCTTATACGTAGCTGTATGTCTATTTTGGTCTCTTTACACAAATATCATAGCTACAGATTTACCAACTATCGTGAACACCCTTTGGCAAATCCTTCTCTCCCTAATACTAAAGTGTTTTCAGGTGGGTTCCGCTGATCATAACATCCACTACTACGACTTGAGAAATATCAGCCAACCGCTGCATGTTTTTAATGGCCATAAGAAGGCTGTTTCTTATGTGAAATTCTTGTCGAACAATGAACTTGCTTCTGCATCAACTGACAGCACTTTGCGGTTGTGGGATGTAAAGGAAAATTTGCCTGTGAGTTATCTTCTTGATATGTTATCCATTGACATCCAAAATGAAGTTGTTAATCTTATGAAATTGTGCTCCTTGTTCCCTCTTTTTTGTCACTCAATAATCTTTCTTGCCAATTCCCACAACTGGTTTGAAAACCAAAGCATTAAACCATTTGAAAATTTGCTAAACTTAAACTTTTTCGCAAAGGACATGGTGTGGTTATTGTGCTTTCTGGAACTAGGGATCTTGTCATTGTTATGGCTTAGACACCTTTTCTTCTCTTTCTCTCTTCTCTCTGACTTCTATAAAATTGAGAACCGTTCTCTCTGTTAAGCACATTTAGACGGTTATGGAGAAGGAGAACTAACATATTTTATATAACATGTTTGGGAGGGGTTATGAACGGTTGAAGTCACTTTTGTCCTTTTCAAAATTACTCTTGAAATGGTTTTCAATCATTGAAAATTCAACTTTAACAGCATGACATTTGCATTTAAAGTGTAAAGTTGAATTAAGTTTGAGTGATTGAAGGTGTGTTTCAAGGTGATTTTGTCTCAACCAATATAGAGCTAAAGTGTACAAGTACTGATTCATCTCTTTTATAATTATTTCAGATTTGTGTGTATAGAGGACACACAAACGAGAAGAATTTTGTGGGTCTAACAGTCAACAGTGAATACATAGCATGCGGCAGTGAAACTAATGAAGTTTTCATTTACCACAAGGTTATCATTTTTATTATTTCACCATCTTGTTTTCAACTACATAAACTTTTGCTTTTGATATGAATATTATCAAGTATCAAGTTAGTAAAAGGGAATTTACTTGCAGGCAATATCAAAACCAATGGCTTGGCATAGGTTTAGTTCAGATTTGGAAGATAACGATGAAGATGCAGGTTCATATTTCATAAGTGCTGTTTGTTGGAAAAGTGATAGCCCAACAATTTTAACAGCAAACAGCCAAGGAACAATCAAAGTGCTGGTACTTGCACCCTAAATATCACAATAAACTTGAGAGAAAGAGAAGACAAGGAAAGTATAATAAGGTAACAAAACTCATCGCCCTCAGTCCGTGTATATGGTGATATTGATATTACTTCCATGTATATCAGCTTGTAAATTTGGTTTTCATTCAACTTCTGTGGAAAGGGTGGATTATGCAATGCTATGTGGACTCCATCTCCTCACTTAGATATATTTTTCTCTTTTTTTTCTCTTTTTTTTTTTTTTGGGTTAGGGTTAGTGGGAATATTGGTAGAAATATGTGATTATTTGCAAGCTAAGTTTAGAATGAATATTTGTTGGAGAGTTGAAAAGAGTTCAATACGTAGTTTGAAATACTGAAAATGCTTGTATATTATACTATTGGACTTTGATGGGGAGAGACCAAATGTAGAGATTCATAAATACTTAGAACTTATGTAAAGGAAATGAAATGAAATTTAAACTTGATTATTGTCATTCAATTTTTTTC

Coding sequence (CDS)

ATGTCAATAAAGGATCTGGAAGAACTTTTAACTCTTCTCACAGAGAAGAAAAGAAAAATGGAGCAAGAAGAAGCAGAGACAAATATGCAAATTTTACTTGGCTTCTTGTATTGCTTGAGAAAGCAAAAGCTCGAGGAGCTCAATGAGATACAAGCTGATCTTCACTACATTAAGGAAGACATTAGCTCTGTGGAGAAGCAGAGATTGGAACTATATAGGTCTAAAGAAAGGTATTCGGGAAAAATGAAAATGCTCGCCGATGACACCGTATCCACAAAATCACGGTCTTCCTTAATCGACAAGCATGGAAATGGAATTAATAGTGGCGCCCAACGGTCACAAGGCTGGATGAGTTCTGGGAATTCCCCCAATCCTAGAGCAGATGCAAAGATACAATTAAGCTCCCAGGGACCACTTAGAAAAGATGCTTATTGTAGTTCAGATTTGCATTCTGTTGCACAATCTGGACTAACTGTAGCAAATAAAAGGAGGGTTCATACACAGTTTAATGAATTGCAAGATTGCTATCTGCAAAAACGACGAAATTGGAGGAAACAATTGTATAAACAAGAAGATAGGGACATAAAGTTTAGTGGCGGAGAAAGTTATAATCCATCTCTTGAAGATTTTCAATCTGTGCTAACTTCTTTTATGCGATACAGCCGATTGAGGGTCATTGCGGAACTTCCACACGGCGATCTTTTTCATTCACCAAATATTGTATCGAGTATAGAGTTTGATCGTGATGACGAGTTCTTTGCAACTGCTGGTGTCTCACGTTGTATCAAGGTTTTTGAGTTTAGCTCGGTGGTAAACGAACCAGCAGATGTTCACTTTCCCGTTGTGGAGATGGCTACTCGGTCAAAACTTAGCTGCTTGAGCTGGAATAAATACACAAAAAGTCATATTGCTAGTAGTGATTATGAGGGAATAGTAACTGTCTGGGATGTTAATACTCGTCAGGTGGTGGCCATTATCTATTTAAAGTTTTCTTAG

Protein sequence

MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTKSHIASSDYEGIVTVWDVNTRQVVAIIYLKFS

Homology

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BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot
Match: P43254 (E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV=2)

HSP 1 Score: 376.3 bits (965), Expect = 3.5e-103
Identity = 198/321 (61.68%), Postives = 247/321 (76.95%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           +SIK+++ LLTLL E+KRKMEQEEAE NMQILL FL+CLRKQK++ELNE+Q DL YIKED
Sbjct: 136 VSIKEVDNLLTLLAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKED 195

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           I++VE+ R++LYR+++RYS K++ML DD  +  +     +K+  G NS +   +G    G
Sbjct: 196 INAVERHRIDLYRARDRYSVKLRMLGDDPSTRNAWPH--EKNQIGFNSNSLSIRGGNFVG 255

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           N  N + + K Q SS G  +KDA   SD  S+ QS +++A K+R+H QFN+LQ+CYLQKR
Sbjct: 256 NYQNKKVEGKAQGSSHGLPKKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECYLQKR 315

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           R    Q   +++ D      E Y+  L DFQSVLT+F RYSRLRVIAE+ HGD+FHS NI
Sbjct: 316 RQLADQPNSKQENDKSVVRREGYSNGLADFQSVLTTFTRYSRLRVIAEIRHGDIFHSANI 375

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDE FATAGVSRCIKVF+FSSVVNEPAD+  P+VEM+TRSKLSCLSWNK+ K
Sbjct: 376 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEK 435

Query: 301 SHIASSDYEGIVTVWDVNTRQ 322
           +HIASSDYEGIVTVWDV TRQ
Sbjct: 436 NHIASSDYEGIVTVWDVTTRQ 454

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot
Match: P93471 (E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 3.0e-102
Identity = 200/323 (61.92%), Postives = 248/323 (76.78%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           +++K+L+ LL LLTEKKRKMEQEEAE NMQILL FL+CLRKQK++EL E+Q DL +IKED
Sbjct: 131 VTMKELDTLLLLLTEKKRKMEQEEAERNMQILLDFLHCLRKQKVDELKEVQTDLQFIKED 190

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           I +VEK R++LYR+++RYS K++ML DD+   KSR S +D + +G+ S     +G +SSG
Sbjct: 191 IGAVEKHRMDLYRARDRYSVKLRML-DDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSG 250

Query: 121 NSPNPRADAKIQLSSQGP--LRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQ 180
            S   + D K Q+SS G    R+D    SD   + QSGL +  K+RVHTQFN+LQ+CYLQ
Sbjct: 251 -SHTKKNDGKSQISSHGHGIQRRDPITGSDSQYINQSGLALVRKKRVHTQFNDLQECYLQ 310

Query: 181 KRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSP 240
           KRR    + + Q++RD  F   E Y+  L+DFQSVLT+F RYSRLRVIAE+ HGD+FHS 
Sbjct: 311 KRRQAADKPHGQQERDTNFISREGYSCGLDDFQSVLTTFTRYSRLRVIAEIRHGDIFHSA 370

Query: 241 NIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKY 300
           NIVSSIEFDRDD+ FATAGVSR IKVF+FS+VVNEP D H PVVEM TRSKLSCLSWNKY
Sbjct: 371 NIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVEMTTRSKLSCLSWNKY 430

Query: 301 TKSHIASSDYEGIVTVWDVNTRQ 322
            K+ IASSDYEGIVTVW + TR+
Sbjct: 431 AKNQIASSDYEGIVTVWTMTTRK 451

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot
Match: Q8NHY2 (E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.1e-35
Identity = 105/328 (32.01%), Postives = 168/328 (51.22%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           + + ++  +L LL +KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++ED
Sbjct: 233 LDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEED 292

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQ 120
           I  VE+            SG    +++D+        + S SS+ID          + SQ
Sbjct: 293 IKRVEEM-----------SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQ 352

Query: 121 GWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQD 180
               SG+S                 +K  + +S L S          ++R+   F +L+ 
Sbjct: 353 PPGFSGSSQT---------------KKQPWYNSTLAS---------RRKRLTAHFEDLEQ 412

Query: 181 CYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GD 240
           CY   R +             + S        L++FQ  L+ F RY+ +R +A L +  D
Sbjct: 413 CYFSTRMS-------------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD 472

Query: 241 LFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCL 300
           L++  +IVSSIEFDRD ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM   SK+SC+
Sbjct: 473 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCI 504

Query: 301 SWNKYTKSHIASSDYEGIVTVWDVNTRQ 322
           SW+ Y K+ +ASSDYEG V +WD  T Q
Sbjct: 533 SWSSYHKNLLASSDYEGTVILWDGFTGQ 504

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot
Match: Q9R1A8 (E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 5.3e-35
Identity = 105/328 (32.01%), Postives = 167/328 (50.91%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           + + ++  +L LL +KK+++E E     +QIL+ FL   R+ K E+L +IQ +L  ++ED
Sbjct: 235 LDLANVNLMLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEED 294

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDT------VSTKSRSSLIDKHGNGINSGAQRSQ 120
           I  VE+            SG    +++D+        + S SS+ID          + SQ
Sbjct: 295 IKRVEEM-----------SGLYSPVSEDSTVPQFEAPSPSHSSIID--------STEYSQ 354

Query: 121 GWMSSGNSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQD 180
               SG S                 +K  + +S L S          ++R+   F +L+ 
Sbjct: 355 PPGFSGTSQT---------------KKQPWYNSTLAS---------RRKRLTAHFEDLEQ 414

Query: 181 CYLQKRRNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPH-GD 240
           CY   R +             + S        L++FQ  L+ F RY+ +R +A L +  D
Sbjct: 415 CYFSTRMS-------------RISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASD 474

Query: 241 LFHSPNIVSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCL 300
           L++  +IVSSIEFDRD ++FA AGV++ IKV+E+ +V+ +  D+H+P  EM   SK+SC+
Sbjct: 475 LYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCI 506

Query: 301 SWNKYTKSHIASSDYEGIVTVWDVNTRQ 322
           SW+ Y K+ +ASSDYEG V +WD  T Q
Sbjct: 535 SWSSYHKNLLASSDYEGTVILWDGFTGQ 506

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot
Match: Q9SYX2 (Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.2e-28
Identity = 90/311 (28.94%), Postives = 153/311 (49.20%), Query Frame = 0


Query: 12  LLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKEDISSVEKQRLEL 71
           L+ E         AE   ++LL FL  L  QK ++ +++  D+  +++DI   E+     
Sbjct: 528 LICEDDSVKSTAAAEEISELLLHFLSSLEVQKKKKASKLLQDIQTLEDDIKEAER----- 587

Query: 72  YRSKERYSGKMKML-ADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSGNSPNPRADAK 131
                RYS  + ++ +   +  + +SS +D+H          S  ++ + N+    ++ +
Sbjct: 588 -----RYSSNVSLVRSHGAIEKRVQSSPLDEH------CTTSSALFVPTANTDRLMSNIR 647

Query: 132 IQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKRRNWRKQLYKQ 191
            QL       +     S   + A+S  T+ ++ R     NE QD   +            
Sbjct: 648 -QLEDAYFFMRSQINLSSSAATARSDKTLKDRDRCSENQNENQDMSTK------------ 707

Query: 192 EDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNIVSSIEFDRDD 251
                    G+S +  LE F   L  F RYS+      +  GDL +S ++V S+ FD D+
Sbjct: 708 ---------GKS-SDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDE 767

Query: 252 EFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTKSHIASSDYEG 311
           E  A AG+S+ IK+F+F++ +NE   VH+P+VEM  +SKLSC+ WN Y K+++AS+DY+G
Sbjct: 768 EHIAAAGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDG 799

Query: 312 IVTVWDVNTRQ 322
           +V +WD  T Q
Sbjct: 828 VVQIWDAGTGQ 799

[Close]

BLAST of Cucsat.G21587.T13 vs. NCBI nr
Match: XP_031735991.1 (E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus])

HSP 1 Score: 631 bits (1628), Expect = 1.39e-222
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 119 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 178

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG
Sbjct: 179 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 238

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 239 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 298

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI
Sbjct: 299 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 358

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK
Sbjct: 359 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 418

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 419 SHIASSDYEGIVTVWDVNTRQ 439

[Close]

BLAST of Cucsat.G21587.T13 vs. NCBI nr
Match: XP_004145465.3 (E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypothetical protein Csa_007625 [Cucumis sativus])

HSP 1 Score: 631 bits (1628), Expect = 1.59e-222
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 123 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 182

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG
Sbjct: 183 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 242

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 243 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 302

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI
Sbjct: 303 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 362

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK
Sbjct: 363 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 422

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 423 SHIASSDYEGIVTVWDVNTRQ 443

[Close]

BLAST of Cucsat.G21587.T13 vs. NCBI nr
Match: XP_038894733.1 (E3 ubiquitin-protein ligase COP1-like [Benincasa hispida])

HSP 1 Score: 616 bits (1589), Expect = 4.73e-216
Identity = 313/321 (97.51%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           MSIKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 161 MSIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 220

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLELYRSKERYSGKMKMLADDT+STKSRSSLIDKHGNGINSGAQRSQGW+SSG
Sbjct: 221 ISSVEKQRLELYRSKERYSGKMKMLADDTISTKSRSSLIDKHGNGINSGAQRSQGWVSSG 280

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 281 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 340

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFS GESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 341 RNWRKQLYKQEDRDIKFSSGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 400

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 401 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 460

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 461 SHIASSDYEGIVTVWDVNTRQ 481

[Close]

BLAST of Cucsat.G21587.T13 vs. NCBI nr
Match: XP_008458987.1 (PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 615 bits (1587), Expect = 1.12e-215
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 166 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 225

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 226 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 285

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 286 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 345

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 346 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 405

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 406 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 465

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 466 SHIASSDYEGIVTVWDVNTRQ 486

[Close]

BLAST of Cucsat.G21587.T13 vs. NCBI nr
Match: TYK12320.1 (E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa])

HSP 1 Score: 615 bits (1587), Expect = 3.03e-215
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 196 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 255

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 256 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 315

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 316 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 375

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 376 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 435

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 436 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 495

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 496 SHIASSDYEGIVTVWDVNTRQ 516

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL
Match: A0A0A0LYH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1)

HSP 1 Score: 631 bits (1628), Expect = 3.63e-222
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 169 MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 228

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG
Sbjct: 229 ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 288

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 289 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 348

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI
Sbjct: 349 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 408

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK
Sbjct: 409 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 468

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 469 SHIASSDYEGIVTVWDVNTRQ 489

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL
Match: A0A5A7TIH5 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G00010 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 5.44e-216
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 166 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 225

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 226 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 285

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 286 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 345

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 346 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 405

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 406 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 465

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 466 SHIASSDYEGIVTVWDVNTRQ 486

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL
Match: A0A1S3C954 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 5.44e-216
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 166 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 225

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 226 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 285

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 286 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 345

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 346 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 405

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 406 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 465

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 466 SHIASSDYEGIVTVWDVNTRQ 486

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL
Match: A0A5D3CLL8 (E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00900 PE=4 SV=1)

HSP 1 Score: 615 bits (1587), Expect = 1.46e-215
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           M+IKDLEELLTLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 196 MTIKDLEELLTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 255

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLEL+RSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSG QRSQGWMSSG
Sbjct: 256 ISSVEKQRLELHRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGVQRSQGWMSSG 315

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NSPNPRADAKIQLSSQGPLRKDAYCSSDLHS+AQSGLTVANKRRVHTQFNELQDCYLQKR
Sbjct: 316 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSIAQSGLTVANKRRVHTQFNELQDCYLQKR 375

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRDIKFSGGESYNP+LEDFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 376 RNWRKQLYKQEDRDIKFSGGESYNPALEDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 435

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEM+TRSKLSCLSWNKYTK
Sbjct: 436 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMSTRSKLSCLSWNKYTK 495

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 496 SHIASSDYEGIVTVWDVNTRQ 516

[Close]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL
Match: A0A6J1CL47 (E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC111012608 PE=4 SV=1)

HSP 1 Score: 593 bits (1530), Expect = 1.66e-207
Identity = 300/321 (93.46%), Postives = 306/321 (95.33%), Query Frame = 0


Query: 1   MSIKDLEELLTLLTEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 60
           MSIK+LEEL+TLL EKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED
Sbjct: 154 MSIKELEELVTLLAEKKRKMEQEEAETNMQILLGFLYCLRKQKLEELNEIQADLHYIKED 213

Query: 61  ISSVEKQRLELYRSKERYSGKMKMLADDTVSTKSRSSLIDKHGNGINSGAQRSQGWMSSG 120
           ISSVEKQRLELYRSKERYSGKMKML DDTVSTKSRSSLIDKHGNGIN G QRSQGWMSSG
Sbjct: 214 ISSVEKQRLELYRSKERYSGKMKMLVDDTVSTKSRSSLIDKHGNGINCGTQRSQGWMSSG 273

Query: 121 NSPNPRADAKIQLSSQGPLRKDAYCSSDLHSVAQSGLTVANKRRVHTQFNELQDCYLQKR 180
           NS NPRAD KIQL SQGPLRKDAYC SDLHSVAQSGL VANKRRVHTQFNELQDCYLQKR
Sbjct: 274 NSANPRADVKIQLGSQGPLRKDAYCGSDLHSVAQSGLAVANKRRVHTQFNELQDCYLQKR 333

Query: 181 RNWRKQLYKQEDRDIKFSGGESYNPSLEDFQSVLTSFMRYSRLRVIAELPHGDLFHSPNI 240
           RNWRKQLYKQEDRD KF+ GESYNP+L+DFQSVLTSFMRYSRLRVIAEL HGDLFHS NI
Sbjct: 334 RNWRKQLYKQEDRDTKFNSGESYNPALDDFQSVLTSFMRYSRLRVIAELRHGDLFHSANI 393

Query: 241 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPADVHFPVVEMATRSKLSCLSWNKYTK 300
           VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEP DVHFP VEM+TRSKLSCLSWNKYTK
Sbjct: 394 VSSIEFDRDDEFFATAGVSRCIKVFEFSSVVNEPTDVHFPAVEMSTRSKLSCLSWNKYTK 453

Query: 301 SHIASSDYEGIVTVWDVNTRQ 321
           SHIASSDYEGIVTVWDVNTRQ
Sbjct: 454 SHIASSDYEGIVTVWDVNTRQ 474

The following BLAST results are available for this feature:

BLAST of Cucsat.G21587.T13 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P43254	3.5e-103	61.68	E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana OX=3702 GN=COP1 PE=1 SV...	[more]
P93471	3.0e-102	61.92	E3 ubiquitin-protein ligase COP1 OS=Pisum sativum OX=3888 GN=COP1 PE=2 SV=1	[more]
Q8NHY2	4.1e-35	32.01	E3 ubiquitin-protein ligase COP1 OS=Homo sapiens OX=9606 GN=COP1 PE=1 SV=1	[more]
Q9R1A8	5.3e-35	32.01	E3 ubiquitin-protein ligase COP1 OS=Mus musculus OX=10090 GN=Cop1 PE=1 SV=2	[more]
Q9SYX2	2.2e-28	28.94	Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana OX=3702 GN=SPA1 PE=1 SV...	[more]

BLAST of Cucsat.G21587.T13 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031735991.1	1.39e-222	100.00	E3 ubiquitin-protein ligase COP1 isoform X2 [Cucumis sativus]	[more]
XP_004145465.3	1.59e-222	100.00	E3 ubiquitin-protein ligase COP1 isoform X1 [Cucumis sativus] >KAE8653640.1 hypo...	[more]
XP_038894733.1	4.73e-216	97.51	E3 ubiquitin-protein ligase COP1-like [Benincasa hispida]	[more]
XP_008458987.1	1.12e-215	97.20	PREDICTED: E3 ubiquitin-protein ligase COP1-like [Cucumis melo] >KAA0043144.1 E3...	[more]
TYK12320.1	3.03e-215	97.20	E3 ubiquitin-protein ligase COP1-like [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G21587.T13 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYH0	3.63e-222	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G699620 PE=4 SV=1	[more]
A0A5A7TIH5	5.44e-216	97.20	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C954	5.44e-216	97.20	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo OX=3656 GN=LOC103498239 PE...	[more]
A0A5D3CLL8	1.46e-215	97.20	E3 ubiquitin-protein ligase COP1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1CL47	1.66e-207	93.46	E3 ubiquitin-protein ligase COP1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 3..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..129
None	No IPR available	PANTHER	PTHR44080:SF2	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 2..323
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 222..266 e-value: 0.46 score: 19.1 coord: 277..316 e-value: 4.0 score: 13.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 208..328 e-value: 6.0E-42 score: 145.7
IPR042755	E3 ubiquitin-protein ligase COP1	PANTHER	PTHR44080	E3 UBIQUITIN-PROTEIN LIGASE COP1	coord: 2..323
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 237..326

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G21587	Cucsat.G21587	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T13.E1	Cucsat.G21587.T13.E1	exon
Cucsat.G21587.T13.E2	Cucsat.G21587.T13.E2	exon
Cucsat.G21587.T13.E3	Cucsat.G21587.T13.E3	exon
Cucsat.G21587.T13.E4	Cucsat.G21587.T13.E4	exon
Cucsat.G21587.T13.E5	Cucsat.G21587.T13.E5	exon
Cucsat.G21587.T13.E6	Cucsat.G21587.T13.E6	exon
Cucsat.G21587.T13.E7	Cucsat.G21587.T13.E7	exon
Cucsat.G21587.T13.E8	Cucsat.G21587.T13.E8	exon
Cucsat.G21587.T13.E9	Cucsat.G21587.T13.E9	exon
Cucsat.G21587.T13.E10	Cucsat.G21587.T13.E10	exon
Cucsat.G21587.T13.E11	Cucsat.G21587.T13.E11	exon
Cucsat.G21587.T13.E12	Cucsat.G21587.T13.E12	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T13.C6	Cucsat.G21587.T13.C6	CDS
Cucsat.G21587.T13.C5	Cucsat.G21587.T13.C5	CDS
Cucsat.G21587.T13.C4	Cucsat.G21587.T13.C4	CDS
Cucsat.G21587.T13.C3	Cucsat.G21587.T13.C3	CDS
Cucsat.G21587.T13.C2	Cucsat.G21587.T13.C2	CDS
Cucsat.G21587.T13.C1	Cucsat.G21587.T13.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21587.T13	Cucsat.G21587.T13-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0046872	metal ion binding