Cucsat.G21570.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAAGGGTCTGCTTAAAGCTTACTGAACAACGCTGTTGTTGCTGCTTCTTCTTCTTCTTCCTATACTGCTTCAGGCAAGTAGATCTCTCTCTTCCTTCCACAGACTCTCCTGCTTTTTCTCTATTCGAATTTATTGGAAATTTGGCGTTTTTGTTTTTGTTCTGATTTCTCAAGTGTTTGTGCAGAATCTACCAGGTTTCTTCATTTCAATTGCAAAAATGTTTCTGACCAGGTGATCCACTGCATTCTATTCTCTTCGATGCCACTTTCATTCTCTCTTTATTTTTGTTCTTGTTTCCGTTGTTTGATTTTGCGGTTTCTCATTTTGTGGTTCTGTGCTGGGTTTTTTCAGGACCGAGTATGATAGGGGTGTCAATACCTTCTCTCCTGAAGGTCGATTGTTCCAGGTTGAGTACGCGATTGAGGCTATTAAGGTAGTTTTTTTGTTTTCCTTCTCTTTCGCTCTCTCATTTCGGGGTTTTCTTCCATAAAAATTCTTGGAGAAGTTTGTGAGATTCGAAGAAGGGTAGGGAAGTTGAGTGGCAGAACCTTTTACATGATCTTTTTTGGGTCCATTTTATTGAATCTGCTGATTTCCTTCCTTAAATTTTTTGCAGCTGGGTTCGACGGCTATTGGTTTGAAAACAAAGGAAGGCGTTGTGCTTGCCGTTGAGAAACGTATTACATCTCCACTACTGGTCTGCCCCATTTCCTTGGATTTTTCTTAATTTCGTTGTTATTTGTTTTCAAGTGCCTATATTATTATTATATTCAGCTTCAACGAGGGGTCTTGCACTAGCAGCCTACGTAGAAATTCTAATAGATATGCAAGCTATATTAGTTTATATGCAAGCACAACTTGAATATCTTGTTGTCAACCTTAAAACTGAAACTTCTACTTTGATTTTAGTAAAAGTTAGTCATTGACCCATTTTCTCGTCTGTTTGGATTTCAAGGCTGCCTTTATTGTCTTCAATTGTGATATTGGAGCTTAGGCACTATTTTGTTCTATATATTCATTTTCGGAACTTTTATTTAGGAACCAAGTAGCGTGGAAAAAATCATGGAAATTGATGAGCATATTGGATGTGCAATGAGTGGATTAATTGCTGATGCTCACACACTTGTTGAACATGCTCGAGTTGAGACCCAGGTGCTGTTGATGCTCTTTCTTTGCATCTATAGTCGATATCTTTTAAAGACAAGCTATTGAATTTTGAACTTCATGTTCTGCAGAACCATCGGTTCTCATATGGTGAACCAATGACTGTGGAGTCTACAACACAAGCTCTTTGTGATCTAGCCCTAAGATTCGGCGAAGGCGATGAGGAGTCCATGGTTATTATCACAACCTTTTTCTACTCAGTTTACTCTCTTTTCTCACTTCCTGTTAAATTAATCTAAACTGGCTTTAAAGTGGCAATGACTTGGCACCATTTATTTCATTACCTAGCGTCCATTCAAAGTATAACCTTCATATCTATTATATGATTAGGGACTTATATCGTGCTTAATATTTACAGAGGTACATGGTTTTTTGGATAACCAACTTTCTAATGCTATCCTGTACCTGTGAAAAGTAGGAGCCTGTAGTCCCCGTTACCATATTCCGTATTTGAAAGAATTAGATCCCTTGTGTTTTTCTTATGATGAAAAAGGATACATGGTGTTATTATTTCACTTGCTAATAAAAGACTTTTTTTTCTCTGTACAGTCTCGACCATTCGGAGTAGCTCTTCTTATTGCTGGGCATGATGAGAAGGGGCCAAGCTTGTAAGTTTAACACTGATAAAGAATAAACTGATTTATGTGTTTAGCTGTTATTTCAGTGCATTGTGTATTTTGTACCCCCACCTCCACAGCCCAAGTGATGGCTGTGTGGGTGTGTGTGAACACTTTTTTTGCATCCTTCAATTCGCGTAGCATGTAAAAGAGGTTATATCATCTTATTTAAGAATACAATACCATTGTCGGGTATTTTTCTTATTGACGTTTTTCATACTTTTACACACTTGCCCCAGGAGAAAGTTGAATTTGCAACTATTGAAATTTATGTGATATTTCTTGATGAGCTGCTTGTAAGTTACCTTTTTGACGAGAAACATGTAGTGTAGACAAACTATATAAGTTGGAGAATTCAATGGTCATCCCAAACCCTAGTGACAGAGGAGATTACAATTTGAAAAGGTTCATGTTAGCCAAAAGTCAAGAAACAGATAATATCAGACTGCTACCCTTTGATAACGTAATGTAACCTCAAAATTCAGGGTCATCAAATAATAGGCAATTTTTCACTTTTATCTTCGCCCTTTAGATTTTTCTCTCAATTGTTTGGTCACCATCAAATAGCCAATATAGATTCAAAGCTAGTATTTCTAGGTTTTCTTTGAGATAAGTACCAAATGACAGATGGAGGAATAAGCTGTGGATTAACAAAGATTTCCGAAGTCTCTCCAATTCTCCAATGTGGGATCCTCAATACACTCTCTCAAAATAGTGGCTCTTTGGGTTCACCATTCTTAGATTGGTAACAACTAGAATAACAAGACATTCTGGTGTTTCTTAACAAATGTAAAAATAAAACCAAACATTTTCTGTAATAAAAGGCATTTCTGTGAAGTGATTCTCCTTGGGCATTGCTTTTGAATTTACCTTTTTCATGACCTTTCTCTTTGCTTTATTATTGTTCTTCTACCAATGTTCATGCTTTTATTCTACTTTTTACTAGGTTTTTTTCTCGTACATGTGTCTTTGAGCTTAATAAAACTAGTTTTCGTTTGGCTCTCATATTTCTAATTTTAAGTACTCTAATAAATTTAGAACATTAAGTCTTCTTCTGAGGCCACCGAATTCATTTGGCTCTTAATGTCAGATAACTCTTTTTGTTTTTTTTTTTATTAATCAGTAGTTACTTGTTACAACCTTACTTGAACAAGATCTGTTTTGTAGGTTGTACAACTCTGTCCTTGAGTTTTAAAGAGACAAGATTAATTATTACTTGTTTGCACCATCTATGCAATTTTAGATGTAGTGTTCATTTTTATTTGGGCAGATAGTGGCAGCATTTTATACTGTTTTAATATTCATACCAGAATTTTGTGCACAATTCTCATTATAGATTAACTACTCCCTTCGTCATATACTGGCATATGATGTTTTCTGCCCAGTTTATAACCTGATAATCTGTTTCATGCAGATTCTACACTGATCCATCTGGCACTTTCTGGCAATGCAATGCTAAAGCTATCGGTTCGGGTTCTGAAGGTGCAGATAGCTCTCTGCAAGAGCAATACAACAAGGTATCTTTTCTACTCTATTTGTGTCTGATATAACTGAATGCTATGGTGGATTACTCTTTTACTTTTTCTTCCATTCTCAGAAAAAATTAGACAGGGTAGAAATTTATGAAGATATATGGTCAACGTGAGATATGACTGATGCAGAGTTTAAATATAAAAAAGCTATTTCTTTGTATTCTTTACTATTATAATTATTTGAGATAAATCGTACCATTTTTCTCTAATGAAAGGGGTTCCAACAAAGTGCTTACAAGCGATGAGACCCTGTGGTTGTTGCACCCATGCTCAAGCAACTTATATTTCAATGTTAAACACCCATATGTTTTGCCACATATTAAATGAACCTCTCGCTTTTATTCAATTTCCACATACTCCAATACTGTATTCAATTTTGATTTCAGGACCTAACACTTCAAGAAGCTGAAACCATAGCACTTTCCATTCTGAAGCAAGTTATGGAAGAGAAGGTAAATAAATAGGCCTTTTGATTCAAACCTATTGGCGTTAAATGCAGGAATGGAATAATGGAATATCAATAAACATCGCACTTCTAACATCTACTCATGCATCTACTAACATGTCGATTAAACTGCTCCTTCCTATTTCAGGTAACTCCCAGCAATGTTGATATTGCGAAGGTGTCTCCAACATACCATCTGTACACCCCTGCAGAGGTGGAGGCGGTGATTAGCCGGCTATGAGGGGGGTTCTTTCGAAAATCTTCTGGACTGCTGTTATGTTTCTTGTCACTGGCATGTATTTGTACTCTTTGAATGGTGAGGGAGAATCTGAGGTTTTCGGCTACTTTCGAAGCTATTGGTGATGTGTTTACTGATAGCTTACAAATTAAATATGGGACATTCTTGATGGGTTATTGCAAACTTAGATGAACAATTTGATTAGTCCTTTTACGAAAGCCCTGATCATTATATTCTGAAACGCCATTTTGTTTCAAAACGTGAGAATATCTTGTGGCAAACAGGAAATATTCGAGTTAGCAGCAAGCAGATTCATTGTTTCTATACTTTTTCTTCGTCTTCACATTTTTGTTTTAGTGTTACTCTTAGAATTATATTTAGGTCAAAGTTAGCTTAGTTAGTTGGGTGATAGTTGGCGTGCCTTTCCATCTTTTAAGGTGAGATGTTTGTTCTCCATCCACACATTTGTTGGTAGGAATGAGAACATTGAGATGGGGAGAAGAAAGGAATATAGAGGCTTCATCCTTTTATATGTATCCCTTGTTTTTACTTTTTCTTTTTGAATCTTTTAATTATTTTTTTTCTCTCCTTTCGAATTCTTGAAAGAATAGAAAG ATGTTTCTGACCAGGACCGAGTATGATAGGGGTGTCAATACCTTCTCTCCTGAAGGTCGATTGTTCCAGGTTGAGTACGCGATTGAGGCTATTAAGCTGGGTTCGACGGCTATTGGTTTGAAAACAAAGGAAGGCGTTGTGCTTGCCGTTGAGAAACGTATTACATCTCCACTACTGGAACCAAGTAGCGTGGAAAAAATCATGGAAATTGATGAGCATATTGGATGTGCAATGAGTGGATTAATTGCTGATGCTCACACACTTGTTGAACATGCTCGAGTTGAGACCCAGAACCATCGGTTCTCATATGGTGAACCAATGACTGTGGAGTCTACAACACAAGCTCTTTGTGATCTAGCCCTAAGATTCGGCGAAGGCGATGAGGAGTCCATGTCTCGACCATTCGGAGTAGCTCTTCTTATTGCTGGGCATGATGAGAAGGGGCCAAGCTTATTCTACACTGATCCATCTGGCACTTTCTGGCAATGCAATGCTAAAGCTATCGGTTCGGGTTCTGAAGGTGCAGATAGCTCTCTGCAAGAGCAATACAACAAGGACCTAACACTTCAAGAAGCTGAAACCATAGCACTTTCCATTCTGAAGCAAGTTATGGAAGAGAAGGTAACTCCCAGCAATGTTGATATTGCGAAGGTGTCTCCAACATACCATCTGTACACCCCTGCAGAGGTGGAGGCGGTGATTAGCCGGCTATGA MFLTRTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADAHTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVALLIAGHDEKGPSLFYTDPSGTFWQCNAKAIGSGSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPSNVDIAKVSPTYHLYTPAEVEAVISRL Homology
BLAST of Cucsat.G21570.T3 vs. ExPASy Swiss-Prot
Match: Q9M4T8 (Proteasome subunit alpha type-5 OS=Glycine max OX=3847 GN=PAE1 PE=2 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 2.7e-126 Identity = 228/237 (96.20%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy Swiss-Prot
Match: Q9LSU1 (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica OX=39947 GN=PAE1 PE=2 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 8.0e-126 Identity = 226/237 (95.36%), Postives = 234/237 (98.73%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy Swiss-Prot
Match: Q42134 (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana OX=3702 GN=PAE2 PE=1 SV=2) HSP 1 Score: 445.7 bits (1145), Expect = 3.4e-124 Identity = 223/237 (94.09%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy Swiss-Prot
Match: O81149 (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana OX=3702 GN=PAE1 PE=1 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-123 Identity = 222/237 (93.67%), Postives = 233/237 (98.31%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy Swiss-Prot
Match: Q5E987 (Proteasome subunit alpha type-5 OS=Bos taurus OX=9913 GN=PSMA5 PE=1 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.0e-88 Identity = 170/238 (71.43%), Postives = 200/238 (84.03%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. NCBI nr
Match: XP_008459031.1 (PREDICTED: proteasome subunit alpha type-5 [Cucumis melo] >XP_008459032.1 PREDICTED: proteasome subunit alpha type-5 [Cucumis melo] >XP_011660309.1 proteasome subunit alpha type-5 [Cucumis sativus] >KAA0043189.1 proteasome subunit alpha type-5 [Cucumis melo var. makuwa] >KAE8653661.1 hypothetical protein Csa_006843 [Cucumis sativus] >TYK12278.1 proteasome subunit alpha type-5 [Cucumis melo var. makuwa]) HSP 1 Score: 465 bits (1197), Expect = 3.78e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. NCBI nr
Match: XP_038893568.1 (proteasome subunit alpha type-5 [Benincasa hispida]) HSP 1 Score: 464 bits (1194), Expect = 1.08e-164 Identity = 236/237 (99.58%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. NCBI nr
Match: XP_022927055.1 (proteasome subunit alpha type-5 [Cucurbita moschata] >XP_022927056.1 proteasome subunit alpha type-5 [Cucurbita moschata] >XP_023001599.1 proteasome subunit alpha type-5 [Cucurbita maxima] >XP_023001600.1 proteasome subunit alpha type-5 [Cucurbita maxima] >XP_023520352.1 proteasome subunit alpha type-5 [Cucurbita pepo subsp. pepo] >XP_023520353.1 proteasome subunit alpha type-5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 461 bits (1187), Expect = 1.27e-163 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. NCBI nr
Match: KAG7019414.1 (Proteasome subunit alpha type-5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 460 bits (1184), Expect = 3.63e-163 Identity = 233/237 (98.31%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. NCBI nr
Match: KAG6583791.1 (Proteasome subunit alpha type-5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 461 bits (1187), Expect = 3.63e-163 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy TrEMBL
Match: A0A1S3C987 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103498261 PE=3 SV=1) HSP 1 Score: 465 bits (1197), Expect = 1.83e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy TrEMBL
Match: A0A5A7TPN9 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G00380 PE=3 SV=1) HSP 1 Score: 465 bits (1197), Expect = 1.83e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy TrEMBL
Match: A0A0A0M0T3 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_1G701940 PE=3 SV=1) HSP 1 Score: 465 bits (1197), Expect = 9.39e-165 Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy TrEMBL
Match: A0A6J1KLM8 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111495679 PE=3 SV=1) HSP 1 Score: 461 bits (1187), Expect = 6.13e-164 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
BLAST of Cucsat.G21570.T3 vs. ExPASy TrEMBL
Match: A0A6J1EGM0 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111433997 PE=3 SV=1) HSP 1 Score: 461 bits (1187), Expect = 6.13e-164 Identity = 234/237 (98.73%), Postives = 237/237 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|