Cucsat.G21554.T5 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G21554.T5
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionprotein tesmin/TSO1-like CXC 5
Locationctg944: 905174 .. 911482 (+)
RNA-Seq ExpressionCucsat.G21554.T5
SyntenyCucsat.G21554.T5
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTAAGCCTTCTTGGTTCATCTTCTTCTTCTGGCCATTCGTACTGTATTCAAATAATCATTAAATTCCATAGCCCTAGGCCTCATCTTCTTTTACTTTCCCCCCTTCTTGTCGGCTGTCTTCCAGCATCAAACTGCTTCTGAATTTCAGGTACTAAAGGTCACCTTTGGCGCTGAAGTTTTTTTTTTTTTTTTCCTTTGTTTCTTATTTTGTTGCATGATCTTTACCACTGCTTTTGGACTTTGATTCCTGCCTGGAATTCAGAGGATTGAGTTGATTTTCTTGGGTTTGGATTCTTGGTAGGGAATATGAGGATGTGAGGAAGCTTTTTCCAAAGGATTTGAAAATTGTTGGTTAGTGCTTTGATATTTGAAGAATTCATATTTAATGGGTGAAGTAGGGAATCAAGAGATGGATAATTTATCCTCGGTAATTCCTCAAACTGATAGTGTGGAACTCGGTAATGTTGTTTCATCTGATGTTCCTGCTAAGAAACTAGCTAGGCAGCTGGATTTTACGGGGACTGGTGGTGCAGTTTTGCCGGAGCATCCTCATTTTCAGTCTCGGAGTCGGTGTCAAGAATCAGAGTCACCTGCAGTCATGGTGGTGCAGAGTCAGTCGCAGCCACAGTCCCCACAACAATTAGTGGTTTTGCCCATTGGAACTAAAGCGCCTCTTCCACCTGCGAGGTCTGCTTGAGATCTCTTGCTTTCTTCGACGCGTTCTTTCAGCTTTGTTAAATTAAATATTTTTCTCTGTTTCTTTATGATGGGGAAGCGAGGGTGTGATTTCTTTAAATTGTTTCCATTTTGATCAGAGATCTATATTAATAAATAAATTGCCTTCTGAGCGTGATATTTCTCCAATATGCTGTCGTACCAAGATTACCGTTTTTTTTTTTAATTGTTACATTTGAATTCTGGACTTCTGATATGTCATTTACTCGAATGTTCCCGCCCCCTTTTCCCCCTGTGTTAGAAAGTTGATTCATTTTTGTTTGGAGGTTAGATTTTATGCTTTTTGTAAGTGGTTCTGTTTTCATTGCTTATTTTCATCTAATCAATTTAAACTATGCATATGACATCTTAGCTTCGTGGTTTTTGTCTCATTATTATAGGATAGGGGTAGGCAAAGACCCCCAATAAATCTTTTCTCTCAATAAAGGAAATATTTCCACTCGTTCTGTATTTTCCTTTAATTTTGCGTGTCCTTTTTTTTTTCTCTTCCCTTTTGTGATCAGGAAGGTTTGGCAATGTTTCCCCTTTCCTACATTCTAGCTCTGACCTTGTCTTTAATGTGGATGAAGTTGTCTATCTCTTGATAAGGCAACTTCAATTTTAGTGTGTTCTTCAAGAGCTTATCAGTAGTAAATTTGAATTTAGTGCCTGCTCGTGTTTTTTAATTGTGCGTGCATCTAAGATTGTTTGATCGCTTGGAATAACTTCATTAATTAATGTGTGACTTAGTTTTTATTTGTTCTTTTTTGACAGAAAGCCAGATTCTCCGAAGTCAAGATCAAGGTCTAATGTTGAAACAAAAGATGCTACTCCAAAGAAACAAAAACAGTGCAAGTTGTGCAACTGCAAACACTCACGCTGCTTAAAGCTGTAAGAATATGATCTATATGCTTCTGCAAAGTTGTTTACCCCATGGGTTGACCTTTCTTAAACTAATTTTTAGTTTTGTGACAATGTAGCATACTCATCACACATCGAATGCCTTAATAGAGTTATTCTGATCAGAACTTATATATGCCTTCTTGCGCTCTTGTGTAATTTTGTAACATGTATTAATAGTTTCTGGATTTTGATTTCTCTTTGGAATACTTTTAGTTGCTTTTACTGTTCATGCTAACCCTTGGTTGTCCTCTTGTCAAATGTTGGAAGTACTGCAGTCAAGTATCCTTTTTCCTTTTTGGATAATAGTTCAGTGACTACGTTAAAAATAAGATTTATTTCATAGTCACTGTAAATACTCCTTTTCCACCCTTGCAATTTGAATAGATAAAGACAAGATCAGTTAACATTTTGCAATTTGAATGGATTCAATCTTATATTTTATAGATCATGTGGCATTTAACCAGTATGACCAATAGCTTTTCTGAATATGTGCGAAGAATTGTTTAGTAATATTGATTACTTCGATTATGATATGGCCACTGGTTGCATTACTCTATAGTGTGGACTTTATTCTACATTCTCCTTCAAAATACCACAAGATGCAGATCAAAATTATCTCAATTGTCTTCTCAATAGGTTTTAAGAAAATATAAGTGAAATAACCTAGTACTGTGGACCTTTTGTATCTTTTACCGTTATGAACTTTAGTGTGAACATGGGAAATTGGTTTCCTTCAAATGTTCATCCTACCTGAAAGGCTGAAACAAAATTAATTCACAGGTACTGTGAGTGTTTTGCATCTGGAGTGTACTGTGATGGTTGCAATTGCACAAATTGCCATAACAATGTCGAGCATGAAGCGTCAAGGAGAGAGGCAGTCGAAACTACTTTAGAGCGTAATCCAAATGCATTCCGACCAAAAATTGCTAACAGCCCACATGGAACACGAGAGAGCAGGGTATGTGTCTTGGTTTGAGTCTGAGTGTAATGGACGATTTTCATCACTTTAGCAATTCATTCGAAGAACTTTTTCCCCCCTTCTGTGCATTTAATTAGAAGGGCGTCATGTTAATTTCTAGAGAAGATGTATCTCTGTTGCCTTGGTTCAATTGATAAATTAACATAATTTTGGTTCTGGAAATGATTAGATACCTATTTGAATTTTGAGCTATCATTAGTGGTTCCAAGCTCTTCATGGATTGTTAAGTCAGTGTTATGACTACCATTTTGCACTACATTTTAAGAATATTTTCAGAGAAGGCATGTTTCATTTTATACGAGCCTAGTGTTGGTTCCTGTCATTTTTTTCCTCATCGAATTTCAGTATCTTTATTCTTATCATTTTTCCCTTGGTATATGCAAACGAATTTTGTGTTAGCATCACTGCTGATCTATTTTTGCACCTGTAGGATGAGATTGGAGAGTTAGTAATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGTTGCTTAAAGAAGTATTGTGAGTGCTTTCAGGCCAATATTCTCTGCTCTGAAAACTGTAAGTGCATGGACTGTAAAAATTTTGAAGGAAGTGAAGAAAGACAAGCTCTTTTCCATGGGGACCATGCCAACAACATAGCTTATATTCAACAGGCAGCCAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTCCCGTTTCAAAGAAAAGAAAAGGCCCAGAGCTAGGCTTTGGCCCTGTAGGGAAGGATTCCCCTCTCAATAGTATACCGCAACTTCATCAGGTAGTATCTTCCAAATATAAAATTTTAATATCTGATGAAACTCTTTCCTTGGTATGCTAACATCTTAATGTGGTAAATTGTTAGTTCATTTAGACTTTAAGGCAGATAAATTAATTTTTTATGCCGTAATAAGAATATATAAATTACATTTTGTAATGGTGTTGGCTATAGTCTGTTATTTTTGTTAATAATCATTTATATGTTATATTTTATGAGTCAGGGGCTCGTGATCTAGACACTAACTTCCCTTTTATGTGTATCAGGCAAATAATATAATGTCTTCAGGCATGTCTACATCATCTCCCTTCCCGGCTGCTCATGTTGGTAGCCCTGTAGCATCGGGGCCTTCAAAATTCTCATTCAGGTATCAGTTGAATGGCTTATGACATTTGTAGTAATGCAGTCAACCAACTGTCTTATTGAACTGAACATGTACCATTTTTTAAGGTCCTTATTAGCTGACCTCATCCAGCCGAACGACTTGAAGGAGCTTTGCTCGGTTTTAGTGGTGTTGACTAGTGAAGTTGCCAAGATCCAAGCAGGTAATGTGTTCTAAAAAATTTTCCGCAAGATGATTTGATCTGCTGGCATTGTGTAGTGTTCAAAATGAATGTGTGCCTGCATACATCAATAAGAGTTTCCATTCATCTTATCATTCTAGCCCGAGTTCTTTTATGACCAATTAAGCTTTGGGGATTAAAGTCAATTCAATCATAGGTACATCCACATAGAGTTTGTGATTTCCGTATATATGGGTCAAGTGGGTCTCTAAGACTGAGGGTCATGATATCTGATGATAACTGTATTCATTTAGCTCTAGCTCTTGTATTACCACTTGATTCCTTATCAGTATGACAGCTCTTTGTAATTGGAGGCACATTTCTTTAGCAAATATCTGCCTTAAGAATATACCTGCAGAAAAGAAATTTACCTTGGAGTCTTGGACCTTGTTACTTAGCTTTTGAAGGTTAAAAAAAATGCACCGGAAGGGCTTCCCAGCAGCATGATCAAATGGTGTATTCTGTTTCTCTTGTCCTGAAAACACCCATGTTGATTAATAATTGCTCCTCTTGGGTGGTGTGTTCAGTTAGATGGCCGTTTCTTTGAGAATCAGATAATGCTTGTAACGATTTTGACCTTACCTTGCTCTTTGGTGGTTTAACTTCAACGATTTTGTAATGAACTAGCGTTAATTTAACTCCATAAATGACACAAAACTAAGAAGCACCAGTAGATACAAAAATTCATCTTAAATCTCATTTCTGGTATCCCCTTCCCAACATCTTGCAGCAAATGTGCCTAGTTTACTTAGATGTACAGTACATATCAAATTGTGCTTTATTTCCTTTTCAGTTGCTACCAAATCTGACATTTATTTTCTCTGAATCCACAATTTTCGTTAAACATTCTCTTTTTTCTGCTTCTCAATACACCTCTCTGGCATGAGTTTTAAGATCTACCTAATTGCAATATATTTTAGGCTAAGGCTTCTTTATTTTAAATTTAAACCTTATAATGGTGTGGACTACCCAACTGAGAATTCTTTGTATATCTGTTCAGAACAAAGAAGTGATGAGAAACAGATAAATGATCCACAACAGACTTCTCGTGCTTCATCTAGTGGAGACGGGGTACAACATCAGAAGGCCGAAGAGAAAGCGGCAGATGGTGAGTGTGGAAGTTCAAATCAAAGTGATAGGAGTGTACATGACAGTTCCAATTCAAATAGTTCGGATATGACAAGAGCAAGGCCGATGTCCCCTGGAACTTTAGCTTTAATGTGTGACGAACAAGATACAATGTTCATGGGAGCTGGTCTAGCTGATGGATCTGCTGCCCATGATTGCAACACGTCATCACATGTTCCCGATAGGTCTCTTTCAGAAGTGTACATCGAGCAGGAACGAATTGTGCTGACAAAGTTTCGCGATTGCCTTAATAAACTCATCACTCTGGGAGAGATAAAAGGTAAGCTCGTGTCTCTTGATACTTGACAAGCTATTAGTATAACTGTGTAGAAGCCAAGAAAATAAGAGGAACTATGGTTTATGTTTATATTATGTGTTTACCATGTATGAACTAACTAGCTCTTGAATCCACATTACAGAAACAAAACTCACTTCTAGAAGTGAAAGCGAAGTGGGGAATCAAAATCAGAGCAACAACTTCACCTCAAATAGTGGGTGCCAACAGAGATCTATTAGCAATGGGGTTGTAAAAAATGTTGCTCTCTCGGCACCCAGAATTCCACCTGCCTGCACTGCAGCTCATCATCCGAATAACGATCTCCCGCTCAAAATTCTTCCCGTACCTAAAAATAGGAAGAGCAAACCACAAATTGACAGAGAAGTGTAGAAAAAGCCCAAGAAAGCAACTGGCGTGTTGCTCCATCTCATTGTTCATTCAGGTTTGCTTCCTCAACTGGTCTTTTCATGTTAGTTAGTTGCCTCATTTTAACGTATATTATTCGTTTTTATATCATCATTAGATTTCTAGGATAATTTTGTTTTTCAAATTCCAATCGTAGATAGAGATTTTGCAATTGCTAAATCATTGTAAGAGATATATAACAAAGAGAAATAATTCATCCTTTTTTTTCTTTTGAGGAAATAGTTCATTCCATTTGATGGCCAATGAAATAAAAGATTAGCATCATTATGCATTTTTGTTCTTTATATTTTCAACTTTTATAATGGAATATTGTGTAATTGTCACTCTCACTCTGAGAACTATTTTGACAAGGATCAAAGTTTCAAGTTCGGATTGATGCTTGAGTTGTTTATTCACACACCCGGAAGAGATTGATCTTTAGTGGTGTATAATTTGCTCATTGTTGTAATTGTAATTGATATATCAATTATAAAGAAGTCTCAATTGCAAATGTAATTGAATTGTTTTTTTTATCACCTTTTACTTAAATAT

Coding sequence (CDS)

ATGCTGGGAAAGCACAACAAAGGATGCCATTGCAAGAAATCAGGTTGCTTAAAGAAGTATTGTGAGTGCTTTCAGGCCAATATTCTCTGCTCTGAAAACTGTAAGTGCATGGACTGTAAAAATTTTGAAGGAAGTGAAGAAAGACAAGCTCTTTTCCATGGGGACCATGCCAACAACATAGCTTATATTCAACAGGCAGCCAATGCTGCAATAACTGGAGCTATTGGATCCTCTGGTTATGCTTGCCTTCCCGTTTCAAAGAAAAGAAAAGGCCCAGAGCTAGGCTTTGGCCCTGTAGGGAAGGATTCCCCTCTCAATAGTATACCGCAACTTCATCAGGTAGTATCTTCCAAATATAAAATTTTAATATCTGATGAAACTCTTTCCTTGGTATGCTAA

Protein sequence

MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNIAYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQVVSSKYKILISDETLSLVC
Homology
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BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match: Q9SZD1 (Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana OX=3702 GN=TCX5 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.7e-45
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           +LGKHNKGCHCKKSGCLKKYCECFQANILCSENCKC+DCKNFEGSEERQALFHG+H+N++
Sbjct: 211 LLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSEERQALFHGEHSNHM 270

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSP-LNSIPQLH 113
           AY+QQAANAAITGA+GSSG+A  P  K+RKG E+ F    KDS  L+  PQ++
Sbjct: 271 AYLQQAANAAITGAVGSSGFAPSPAPKRRKGQEILFNQAIKDSSRLSHFPQVN 323

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match: Q9SL70 (Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana OX=3702 GN=TCX6 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 2.6e-41
Identity = 79/110 (71.82%), Postives = 92/110 (83.64%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           ML +HNKGCHCKKSGCLKKYCECFQANILCSENCKC+DCKNFEGSE RQ+LFHG+H++N+
Sbjct: 198 MLARHNKGCHCKKSGCLKKYCECFQANILCSENCKCLDCKNFEGSEVRQSLFHGEHSHNL 257

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQ 111
           AY+Q  ANAAITGAIGSSG+A  P  K+RKG E+ F    KDS  + + Q
Sbjct: 258 AYLQH-ANAAITGAIGSSGFASAPPPKRRKGQEIFFNQGTKDSSTHRLGQ 306

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match: F4JY84 (Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thaliana OX=3702 GN=TCX7 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           ++GKH+KGCHC+KSGCLKKYCEC+QANILCSENC+C DCKNFEGSEER+AL HG   ++ 
Sbjct: 174 LIGKHSKGCHCRKSGCLKKYCECYQANILCSENCRCQDCKNFEGSEERKALLHGSQVSD- 233

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPEL 95
            YIQQ  NAA+  AI  S Y   P S+KRK  ++
Sbjct: 234 TYIQQMTNAAVNRAIDMSAYLYPPESRKRKSKDI 266

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match: Q08CM4 (Protein lin-54 homolog OS=Danio rerio OX=7955 GN=lin54 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.2e-16
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 4   KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNIAYI 63
           +H+KGC+CKKSGCLK YCEC++A I+CS  CKCM CKNFE S ER+ L H   A  +   
Sbjct: 617 RHSKGCNCKKSGCLKNYCECYEAKIMCSSICKCMGCKNFEESPERKTLMHLADAAEVRVQ 676

Query: 64  QQAA 68
           QQ A
Sbjct: 677 QQTA 680

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match: Q6MZP7 (Protein lin-54 homolog OS=Homo sapiens OX=9606 GN=LIN54 PE=1 SV=3)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-15
Identity = 36/64 (56.25%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 4   KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNIAYI 63
           +H+KGC+CK+SGCLK YCEC++A I+CS  CKC+ CKNFE S ER+ L H   A  +   
Sbjct: 594 RHSKGCNCKRSGCLKNYCECYEAKIMCSSICKCIGCKNFEESPERKTLMHLADAAEVRVQ 653

Query: 64  QQAA 68
           QQ A
Sbjct: 654 QQTA 657

[Close]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match: XP_004142567.1 (protein tesmin/TSO1-like CXC 5 [Cucumis sativus] >KGN66810.1 hypothetical protein Csa_007138 [Cucumis sativus])

HSP 1 Score: 241 bits (616), Expect = 3.65e-74
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI
Sbjct: 207 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 266

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 267 AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 319

[Close]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match: KAA0062604.1 (protein tesmin/TSO1-like CXC 5 [Cucumis melo var. makuwa])

HSP 1 Score: 239 bits (610), Expect = 2.39e-73
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANN+
Sbjct: 199 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNM 258

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIG+SGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 259 AYIQQAANAAITGAIGTSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 311

[Close]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match: XP_008462731.1 (PREDICTED: protein tesmin/TSO1-like CXC 5 [Cucumis melo])

HSP 1 Score: 239 bits (610), Expect = 2.83e-73
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANN+
Sbjct: 207 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNM 266

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIG+SGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 267 AYIQQAANAAITGAIGTSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 319

[Close]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match: XP_038880602.1 (protein tesmin/TSO1-like CXC 5 [Benincasa hispida])

HSP 1 Score: 228 bits (580), Expect = 6.92e-69
Identity = 106/113 (93.81%), Postives = 108/113 (95.58%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDH NN+
Sbjct: 203 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHVNNM 262

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           A IQQAANAAITGAIGSSGYACLP SKKRKGPEL FGPVGKDSPLNS+PQ HQ
Sbjct: 263 ASIQQAANAAITGAIGSSGYACLPTSKKRKGPELCFGPVGKDSPLNSMPQFHQ 315

[Close]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match: KAG7023594.1 (Protein tesmin/TSO1-like CXC 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (552), Expect = 6.21e-66
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDH +N+
Sbjct: 78  MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHVSNM 137

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQV 114
           AYIQQAANAAITGAIGSSGYA LP SKKRK PEL F  VGKD PLNSIPQ HQV
Sbjct: 138 AYIQQAANAAITGAIGSSGYAYLPTSKKRKVPELCFASVGKDPPLNSIPQFHQV 191

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match: A0A0A0LY61 (CRC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G696440 PE=3 SV=1)

HSP 1 Score: 241 bits (616), Expect = 1.77e-74
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI
Sbjct: 207 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 266

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 267 AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 319

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match: A0A5A7V5S5 (Protein tesmin/TSO1-like CXC 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001020 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 1.16e-73
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANN+
Sbjct: 199 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNM 258

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIG+SGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 259 AYIQQAANAAITGAIGTSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 311

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match: A0A1S3CJ79 (protein tesmin/TSO1-like CXC 5 OS=Cucumis melo OX=3656 GN=LOC103501025 PE=3 SV=1)

HSP 1 Score: 239 bits (610), Expect = 1.37e-73
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANN+
Sbjct: 207 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNM 266

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIG+SGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ
Sbjct: 267 AYIQQAANAAITGAIGTSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 319

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match: A0A6J1CTB2 (protein tesmin/TSO1-like CXC 5 OS=Momordica charantia OX=3673 GN=LOC111014554 PE=3 SV=1)

HSP 1 Score: 219 bits (559), Expect = 3.99e-66
Identity = 101/113 (89.38%), Postives = 105/113 (92.92%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCS+NCKCMDCKNFEGSEERQALFHGDH NN+
Sbjct: 203 MLGKHNKGCHCKKSGCLKKYCECFQANILCSDNCKCMDCKNFEGSEERQALFHGDHVNNM 262

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQ 113
           AYIQQAANAAITGAIGSSGYACL + KKRKG EL FGP GKD PLNS+PQ HQ
Sbjct: 263 AYIQQAANAAITGAIGSSGYACLQIPKKRKGQELCFGPTGKDPPLNSMPQFHQ 315

[Close]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match: A0A6J1H9V6 (protein tesmin/TSO1-like CXC 5 OS=Cucurbita moschata OX=3662 GN=LOC111461845 PE=3 SV=1)

HSP 1 Score: 217 bits (552), Expect = 4.14e-65
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0 

Query: 1   MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHANNI 60
           MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDH +N+
Sbjct: 199 MLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHVSNM 258

Query: 61  AYIQQAANAAITGAIGSSGYACLPVSKKRKGPELGFGPVGKDSPLNSIPQLHQV 114
           AYIQQAANAAITGAIGSSGYA LP SKKRK PEL F  VGKD PLNSIPQ HQV
Sbjct: 259 AYIQQAANAAITGAIGSSGYAYLPTSKKRKVPELCFASVGKDPPLNSIPQFHQV 312

The following BLAST results are available for this feature:
BLAST of Cucsat.G21554.T5 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZD11.7e-4575.22Protein tesmin/TSO1-like CXC 5 OS=Arabidopsis thaliana OX=3702 GN=TCX5 PE=1 SV=1[more]
Q9SL702.6e-4171.82Protein tesmin/TSO1-like CXC 6 OS=Arabidopsis thaliana OX=3702 GN=TCX6 PE=1 SV=1[more]
F4JY844.1e-3164.89Protein tesmin/TSO1-like CXC 7 OS=Arabidopsis thaliana OX=3702 GN=TCX7 PE=1 SV=1[more]
Q08CM42.2e-1659.38Protein lin-54 homolog OS=Danio rerio OX=7955 GN=lin54 PE=1 SV=1[more]
Q6MZP71.4e-1556.25Protein lin-54 homolog OS=Homo sapiens OX=9606 GN=LIN54 PE=1 SV=3[more]
BLAST of Cucsat.G21554.T5 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142567.13.65e-74100.00protein tesmin/TSO1-like CXC 5 [Cucumis sativus] >KGN66810.1 hypothetical protei... [more]
KAA0062604.12.39e-7398.23protein tesmin/TSO1-like CXC 5 [Cucumis melo var. makuwa][more]
XP_008462731.12.83e-7398.23PREDICTED: protein tesmin/TSO1-like CXC 5 [Cucumis melo][more]
XP_038880602.16.92e-6993.81protein tesmin/TSO1-like CXC 5 [Benincasa hispida][more]
KAG7023594.16.21e-6690.35Protein tesmin/TSO1-like CXC 5 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Cucsat.G21554.T5 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY611.77e-74100.00CRC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G696440 PE=3 SV... [more]
A0A5A7V5S51.16e-7398.23Protein tesmin/TSO1-like CXC 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s... [more]
A0A1S3CJ791.37e-7398.23protein tesmin/TSO1-like CXC 5 OS=Cucumis melo OX=3656 GN=LOC103501025 PE=3 SV=1[more]
A0A6J1CTB23.99e-6689.38protein tesmin/TSO1-like CXC 5 OS=Momordica charantia OX=3673 GN=LOC111014554 PE... [more]
A0A6J1H9V64.14e-6590.35protein tesmin/TSO1-like CXC 5 OS=Cucurbita moschata OX=3662 GN=LOC111461845 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033467Tesmin/TSO1-like CXC domainSMARTSM01114CXC_2coord: 4..45
e-value: 8.4E-20
score: 81.8
IPR005172CRC domainPFAMPF03638TCRcoord: 7..41
e-value: 3.3E-13
score: 49.7
IPR005172CRC domainPROSITEPS51634CRCcoord: 1..44
score: 20.341974
IPR028307Lin-54 familyPANTHERPTHR12446TESMIN/TSO1-RELATEDcoord: 1..120
NoneNo IPR availablePANTHERPTHR12446:SF49PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1coord: 1..120

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G21554Cucsat.G21554gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21554.T5.E1Cucsat.G21554.T5.E1exon
Cucsat.G21554.T5.E2Cucsat.G21554.T5.E2exon
Cucsat.G21554.T5.E3Cucsat.G21554.T5.E3exon
Cucsat.G21554.T5.E4Cucsat.G21554.T5.E4exon
Cucsat.G21554.T5.E5Cucsat.G21554.T5.E5exon
Cucsat.G21554.T5.E6Cucsat.G21554.T5.E6exon
Cucsat.G21554.T5.E7Cucsat.G21554.T5.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21554.T5.C1Cucsat.G21554.T5.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G21554.T5Cucsat.G21554.T5-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus