Cucsat.G21389.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G21389.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	AT-hook motif nuclear-localized protein
Location	ctg910: 2346879 .. 2351304 (+)
RNA-Seq Expression	Cucsat.G21389.T3
Synteny	Cucsat.G21389.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTATTTCTTTTTAGCAAAACTCTTCAACTAAACAGTTCTTTTTTAAATTTTGTGATTATAATCTCATTGTAAAGTCCTTTCTCATAATTTTCTTCGTGCTATTTAAAAAATAATAATAATTATTATTCATAATAAAGAAAGAAACTACCAGATTTCTAATTTTTGAGCTTCTAATTCATTTTCATTTTTCTGGGTTTTGATTTTTGAAGAGTTTCTTTCATGTTCTTCTTATTTTCTGATGAGGGATTGGAAATTTAGGAATGAAAAATGAGTTTTCATAAGTAGTTGGAAGAAATATTTGTTGGGTTTTTTTTTTTTTTTTTTTTTTTTCTCTTATTTCCTTTTAAGTAATGGAGGGAAGGGATGGTGGTGGTGCAAGTAGTGGAGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCAAGGACTTCCGATAACCCACCGCAGACTGGTGGATCAACGACGCCGCCGGGGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAGGTATCGGGACAGCCTCCGCCGCCAACGGCGGCCTCATCAGTACCGGGAAAGAAGAAAAGAGGGAGGCCCAGAAAATATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTTATCAGTGCCGCCGCCGGTCATCGACTTCTCAACGGAGAAGAAGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAGTTCGAAGTAGATAATTTAGGTAATGGGGATTTATTGATTTAATCACTCTGCTCAACTTGGAGGGATTTTTTGTTTCTGCAACTTAGTTTTTTTAAAAATGAAAATAGAGCTTTGTTTTGGTTCTATTGATGTTCGTGGCTAGTTAGTACTGTTATTCGTTGGGATGATTTGGGAACTGGGTTTTGGAGAGAAGTGTTTGGATTTTAAGATTATTACTTAGTGATTCTGTGAGAACTTCTTTTCTTGCTGGGTGGAGGATGTGGGTCCTCTGGTTTGGATTCTTTGATTAAGTTCTCGAAGCATATTGTTGTTCTGATTCTCAAAAGATTGAGAGCTTTCTAGGTTGGTCTGAGAATGTCGGAATCTTCTTGTTTTTTTAGTTCTTGTTTGAACTCTCTGTCTCTGTCTCTTTCTCTCATTTTGACTATTTTCTGATCCTGAAAACTCATGATTCGTTCACATCGAGAAAAGGGGTCTTCAATTTTTTTGTTCTGGTGTTGGGTTCTGATTTGATTTTTATTTCTTACCAGTTCATAGACTCCATGATCTTTCATTATCTTCAAATCTTTCTACATGGACCCAATTAAGTTTTTTCCATTACGTGCCTCTACTCAGCTCCAGTTTAATTCTCTCTTAGAGGTTTATGGATAGAAATCTCTAAATCTGTCACTTGATATGGAAGTTTTAGGATTCTGTAATGGTTGCAAAGATTCTTTTAATGTTGCCCACTTCAAATTTTTTTTTCTTTGAAGATTCATTCTGCTGCTAAATTACCAATCATTCAATCTAGTTTGTCGTTGTGTTACAATCCTGTCACTAAATCCGTCCTTCTCAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCATATCATCACTGTCAATGCGGGCGAGGTAAAATGTCAAGAACTTATCTTCTTCACATAAGTTGGGGTAAAACCTGCGGTAGAGTTTTTTCTTCTTCTTTTTTCATATGGTTGATCAATAAAGAGACTAATATTCTTTTTCTCTTCACGTCTAATCCATTTCTGAAGTGGAATTTATAGGGGGGAAATCAAATTTATGTAAATAACTGTGAGAATAGATGAAAGTCTTGAAGTTTGGTTGTTTCATTTAGTCACTATTTGCTCCACTCCAAATAGGTAGTTTTCAATTTGTTAAAACAAAAGTGACTTAAAACACTCGTTTCTATTGAACTATTCTTGTGGTAAGTGAGTTAAGGAGCTGAGTCTTGTGATGTAGGGAAGGAAAAGAAAAAAAAAACGGTAACAAATTACACTTTCATCCATCCTTTTCTCTCATGTGACCAAGTTTTTCCTGTTTTGTAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGTGATGCATTTATTTTGCCCTCTAATGAAAAAATGCCTAATTGAATGGTAATTCGGTTGTGTATGAATTCATGGACTTTGCAATGGTCTTTCCCCGTCTATTGGCTCTTGCTACCATGCTTTAGGATCCAGTACATAAATAACATGCCATTATTAGTTCCTGACAAAATATCGAAATTAAAAATTCGAACATTATAGATAAGAACAATTTGTATACGCAGACATCTATATGAAGCAGTTCTGAGAAATAGTACCATATATATTAATTATGGTTCAGAAATTTTTAAGTTGAATATTATGGAGGCTAAATTGAAATTTAATGAGCATTTATTGTCTACTTTTCTTTTAAAATCATGGCTTTCCAATTCTTAACATTACCTTCCTAACCTTGCACTAGGACATCGACATATATTTTACTGTTTCCGTCCTGCTCGTTGGGTTAAACCATCCTCTCTCTAACCTTCACGCCAGTCATAGCTAGATAGCTCTTTATTATTTCTTTCAGTTATCAACTCCTATAGGTGAAATGACTTCCAAGCATGTCTCTCTTGAGTTATCACTTTCATTCCTCAACAAAGAACCTTCATTTAAAATTTTGTGTAATGTAGCTAAATTTGAATTCGCTGCTTTCTTTTTTCAATTTTGGAATCTTCGATCTGTTCTATTATGTTTATGTTGTTCAACTCAGGCGGTTCAGTCAAGATGCAATCAGCCAATCCTGTTTAAGAGTTGATTCATGGGAGTACACTGAATACCTTAATGTTTATCCACATGTTTTAGGCAGTAAAAACTTTGGTCATAAGAGGCTATAACTGACGGTTCCAAATAATGGAAAAGAAACTCATTCAAATAGTAGCTTTCTTGCATTTTTGTATTTTTTGCTTCAGCACTGTGTTTTGAGCATCAGGCTCATTCGTTATTTTAATGAAAGTCTTGTTTTCGTTGCAAAAAAAGAATAGTAGCTTTCTTAAGGATTGGTGGGGTATATTCTTCAGATACCTGGTCATTAAAATGAATTTGCTAGTAAATATTGATTACAATAAAAGTTTCCATTTTGATAGTTTCAATCAGTCCAGCATTGCATAATCATTATTTTTCAAGTAATGCTGAAAGATTTCCTTTTCATTTCTTAATGCACCAGGTTGTTCTGAAAACCTCAAAGTTTTGCTTCTGATCTATGCCAAGAAAATCTCTCTGATTAATTGACTACCTTATATAAAGATTGTTCTTCTCGCATACTTCTCTGCTAAAACGTGGTGGATAGAGGATCAAGTAGAGGATTAGGATGCATGTTTTTCATCCATTTGCAAAATATATCTCATATCGATATTTTTCTCATTTGGTTCACAGGGACGATTTGAAATACTTTCCCTGTCCGGCTCATTCATGCCTAGTGACAATGGAGCAACAAGAAGTAGATCTGGTGGAATGAGTGTTTCCTTAGCAAGTCCAGATGGGCGTGTAGTAGGCGGTGGAGTAGCTGGTCTATTAGTAGCTGCTAGTCCTGTTCAGGTATGGTCTTTCTTTGTTTCTTCCACGCAATCAGTGATCCATTATCGATATGGCCAGATTGTATTTACTTTGCAAACAAAAGCTATGGAAACTAAGATTTCGCTTATTACTGTCTTTGCAAAAATAGGTTGTAGTAGGGAGTTTTCTATCAGGAAATCAACATGAACAGAAACCGAAAAAGCCAAAACATGATACTATCTCACCGGCCCCGCCAACTGCTGCCATTCCAATATCTTGTGTCGATCCTAAGTCCAACCTGTCACCTTCCAGTTCCTTTCGAGGCGATAACTGGTCGATGCTGCCAACTGATTCGAGAAATAAGTCAACTGATATCAATGTATCACTACCCAGTGCTTGATTTTTGAGCTCCATAGCTTATTATGGAAGTCTCCTCTCTCCCATTTTGCCATCATCAAACTTATTAATTGGTGGATGTTTCACATCTTGTTTCATGATCTCTGTAACTTACCATTGTACTTCCTATATGTAGAATTTTAAACCCCCACACTACTCCTGTTGATTCTTCTCAATTAGTTTTTCACTTGGTAGAGTAGCTATAGGCTCCCCGATGCTACTGCGTCGAGCCGAGTAGAATAGTTTGATGTAATGTGAACGACTTTCACTTTTTGTTTCATATCAATGGATTGTGATTTTATGCTTCCTTCTTTTTGTCCTTATCAACATCAGTCAACATGTCTGTCTCAAATTTTTGTC

Coding sequence (CDS)

ATGGAGGGAAGGGATGGTGGTGGTGCAAGTAGTGGAGTTACTGTGGTGGGATCAGATGCTCCGTCGGAGTACAAAATAGCTCCAAGGACTTCCGATAACCCACCGCAGACTGGTGGATCAACGACGCCGCCGGGGACTCAATCAACTTCGACGCCGTCGGCTTCAGCTCAGGTATCGGGACAGCCTCCGCCGCCAACGGCGGCCTCATCAGTACCGGGAAAGAAGAAAAGAGGGAGGCCCAGAAAATATGGACCCGATGGCTCTGTTTCTATGGCTCTGTCTCCCAAGCCGATATCGTTATCAGTGCCGCCGCCGGTCATCGACTTCTCAACGGAGAAGAAGGGGAAAGTACGGCCGGCGAGCGCTGTGAGTAAAAGCAAGTTCGAAGTAGATAATTTAGGTGACTGGGTTCCGTGTTCTCTTGGTGCAAATTTTACGCCTCATATCATCACTGTCAATGCGGGCGAGGATGTCACAATGAAGATAATATCCTTTTCTCAACAAGGGCCTCGAGCTATATGCATTTTATCTGCAAACGGTGTAATCTCAAGTGTCACTCTCCGCCAGCCTGACTCCTCTGGAGGAACACTAACTTATGAGGTTGTTCTGAAAACCTCAAAGTTTTGCTTCTGA

Protein sequence

MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSGQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPASAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEVVLKTSKFCF

Homology

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-51
Identity = 127/215 (59.07%), Postives = 157/215 (73.02%), Query Frame = 0


Query: 4   RDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTS--TPSASAQVSGQ 63
           R   G   G+TVV SDAPS++ +A R S++  Q+  S TPP  Q +S  T     Q+S  
Sbjct: 13  RSTTGNDGGITVVRSDAPSDFHVAQR-SESSNQSPTSVTPPPPQPSSHHTAPPPLQISTV 72

Query: 64  PPPPTAAS--SVPG---KKKRGRPRKYGPDGSVSMALSPKPISLS-----VPPP---VID 123
               T A+   + G   KKKRGRPRKYGPDG+V +ALSPKPIS +     +PPP   VID
Sbjct: 73  TTTTTTAAMEGISGGLMKKKRGRPRKYGPDGTV-VALSPKPISSAPAPSHLPPPSSHVID 132

Query: 124 FS-TEKKGKVRPASAVSKSKF--EVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISF 183
           FS +EK+ KV+P ++ +++K+  +V+NLG+W PCS+G NFTPHIITVN GEDVTMKIISF
Sbjct: 133 FSASEKRSKVKPTNSFNRTKYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISF 192

Query: 184 SQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE 201
           SQQGPR+IC+LSANGVISSVTLRQPDSSGGTLTYE
Sbjct: 193 SQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYE 225

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot
Match: O49658 (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.1e-49
Identity = 118/203 (58.13%), Postives = 145/203 (71.43%), Query Frame = 0


Query: 8   GASSGVTVVGSDAPSEYKIAPR--TSDNPPQTGGSTTPPGTQSTSTPSASAQVSGQPPPP 67
           G+  GVTVV S+APS++ +APR  TS+ PP +     PP  Q++ TPSA+          
Sbjct: 13  GSDGGVTVVRSNAPSDFHMAPRSETSNTPPNSVAPPPPPPPQNSFTPSAAMD-------- 72

Query: 68  TAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPP--VIDFST--EKKGKVRPA- 127
              SS P KK+RGRPRKYG DG+ ++ LSP PIS + P    VIDFST  EK+GK++PA 
Sbjct: 73  -GFSSGPIKKRRGRPRKYGHDGA-AVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPAT 132

Query: 128 ---SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILS 187
              S+  + K++V+NLG+W P S  ANFTPHIITVNAGEDVT +IISFSQQG  AIC+L 
Sbjct: 133 PTPSSFIRPKYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLC 192

Query: 188 ANGVISSVTLRQPDSSGGTLTYE 201
           ANGV+SSVTLRQPDSSGGTLTYE
Sbjct: 193 ANGVVSSVTLRQPDSSGGTLTYE 205

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 6.6e-31
Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 0


Query: 16  VGSDAPSEYKIAPRTSDNPP-QTGGSTTPPGTQSTSTPSASAQVSGQPPPPTAASSVPGK 75
           +G++ PS Y +APR SD+P  Q  G + PP                   P  ++    GK
Sbjct: 13  IGAEVPSAYHMAPRPSDSPANQFMGLSLPP----------------MEAPMPSSGEASGK 72

Query: 76  KKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPASAVSKSKFEVDNLG 135
           K+RGRPRKY  +G+   + S   +   V   +  F  +K  K    +    S  E   +G
Sbjct: 73  KRRGRPRKYEANGAPLPSSSVPLVKKRVRGKLNGFDMKKMHK----TIGFHSSGERFGVG 132

Query: 136 DWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSG 195
             V   +G+NFTPH+ITVN GED+TM+IISFSQQGPRAICILSANGVIS+VTLRQPDS G
Sbjct: 133 GGVGGGVGSNFTPHVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQPDSCG 178

Query: 196 GTLTYE 201
           GTLTYE
Sbjct: 193 GTLTYE 178

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot
Match: O80834 (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 69/139 (49.64%), Postives = 95/139 (68.35%), Query Frame = 0


Query: 62  PPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPAS 121
           PPPP   S  P K+KRGRPRKYG DGSVS+ALS   +S   P      ++ K+G+ RP  
Sbjct: 88  PPPP--PSETPMKRKRGRPRKYGQDGSVSLALSSSSVSTITPN-----NSNKRGRGRPPG 147

Query: 122 AVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANGV 181
           +  K +  + ++G+ +P S G +FTPH+I V+ GED+  K+I+FSQQGPRAIC+LSA+G 
Sbjct: 148 SGKKQR--MASVGELMPSSSGMSFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGA 207

Query: 182 ISSVTLRQPDSSGGTLTYE 201
           +S+ TL QP +S G + YE
Sbjct: 208 VSTATLIQPSASPGAIKYE 217

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot
Match: Q9SB31 (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.3e-28
Identity = 96/224 (42.86%), Postives = 123/224 (54.91%), Query Frame = 0


Query: 1   MEGRDGGGASSGVT----------VVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTS 60
           ME R+G   ++ +T             SD        PR  +  P     TT P   + +
Sbjct: 1   MEEREGTNINNNITSSFGLKQQHEAAASDGGYSMDPPPRPENPNPFLVPPTTVPAAATVA 60

Query: 61  ---TPSASAQVS-GQPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPV 120
              T +A+   S   P   T+A  +  KKKRGRPRKY PDG++ + LSP PIS SV P  
Sbjct: 61  AAVTENAATPFSLTMPTENTSAEQL--KKKRGRPRKYNPDGTLVVTLSPMPISSSV-PLT 120

Query: 121 IDFSTEKKGKVRPAS----------AVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGE 180
            +F   K+G+ R  S             +S  + +  G      +GANFTPH++ VNAGE
Sbjct: 121 SEFPPRKRGRGRGKSNRWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGE 180

Query: 181 DVTMKIISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYE 201
           DVTMKI++FSQQG RAICILSANG IS+VTLRQ  +SGGTLTYE
Sbjct: 181 DVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 221

[Close]

BLAST of Cucsat.G21389.T3 vs. NCBI nr
Match: XP_004147567.1 (AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KGN50187.1 hypothetical protein Csa_000512 [Cucumis sativus])

HSP 1 Score: 386 bits (991), Expect = 8.35e-133
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA
Sbjct: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. NCBI nr
Match: XP_008437162.1 (PREDICTED: AT-hook motif nuclear-localized protein 1 [Cucumis melo] >KAA0042841.1 AT-hook motif nuclear-localized protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 378 bits (971), Expect = 9.21e-130
Identity = 196/200 (98.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPP TQSTSTPSASAQVSG
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPATQSTSTPSASAQVSG 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTA SSVPGKKKRGRPRKYGPDGSVSMALSPKPIS SVPPPVIDFSTEKKGKVRP 
Sbjct: 61  QPPPPTAGSSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPV 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. NCBI nr
Match: XP_038906607.1 (AT-hook motif nuclear-localized protein 1 [Benincasa hispida])

HSP 1 Score: 374 bits (961), Expect = 3.06e-128
Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGST PP TQSTSTPSASAQVS 
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTPPPATQSTSTPSASAQVSA 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPIS SVPPPVIDFSTEKKGKVRPA
Sbjct: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           +AVSKSKFEVDNLGDWVPCS+GANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 TAVSKSKFEVDNLGDWVPCSVGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. NCBI nr
Match: XP_022969838.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima])

HSP 1 Score: 343 bits (880), Expect = 6.53e-116
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGG ASSGVTVVGSDAPS+Y+IAPRTSD+PPQTGGST PP TQ TSTPSASAQV  
Sbjct: 1   MEGRDGG-ASSGVTVVGSDAPSKYQIAPRTSDSPPQTGGSTLPPATQPTSTPSASAQVPA 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QP PPTAASSVPGKKKRGRPRKYGPDGSV+MALSPKPIS SVPPPVIDFS EK+GKVRPA
Sbjct: 61  QPTPPTAASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKRGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWV-PCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSAN 180
           S VSK+KFEVDNLGDWV PCS+GANFTPHIITV+AGEDVTMKIISFSQQGPRAIC+LSAN
Sbjct: 121 SGVSKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEDVTMKIISFSQQGPRAICVLSAN 180

Query: 181 GVISSVTLRQPDSSGGTLTYE 200
           GVISSVTLRQPDSSGGTLTYE
Sbjct: 181 GVISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. NCBI nr
Match: XP_023549772.1 (AT-hook motif nuclear-localized protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340 bits (872), Expect = 1.07e-114
Identity = 180/201 (89.55%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGG ASSGVTVVGSDAPS+Y+IAPRTS +PPQ+GGST PP TQ TSTPSASAQV  
Sbjct: 1   MEGRDGG-ASSGVTVVGSDAPSKYQIAPRTSGSPPQSGGSTLPPATQPTSTPSASAQVPA 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QP PPTAASSVPGKKKRGRPRKYGPDGSV+MALSPKPIS SVPPPVIDFS EKKGKVRPA
Sbjct: 61  QPTPPTAASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKKGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWV-PCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSAN 180
           S VSK+KFEVDNLGDWV PCS+GANFTPHIITV+AGEDVTMKIISFSQQGPRAIC+LSAN
Sbjct: 121 SGVSKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEDVTMKIISFSQQGPRAICVLSAN 180

Query: 181 GVISSVTLRQPDSSGGTLTYE 200
           GVISSVTLRQPDSSGGTLTYE
Sbjct: 181 GVISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL
Match: A0A0A0KP42 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G157940 PE=4 SV=1)

HSP 1 Score: 386 bits (991), Expect = 4.04e-133
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA
Sbjct: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL
Match: A0A5A7TMP3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003500 PE=4 SV=1)

HSP 1 Score: 378 bits (971), Expect = 4.46e-130
Identity = 196/200 (98.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPP TQSTSTPSASAQVSG
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPATQSTSTPSASAQVSG 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTA SSVPGKKKRGRPRKYGPDGSVSMALSPKPIS SVPPPVIDFSTEKKGKVRP 
Sbjct: 61  QPPPPTAGSSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPV 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL
Match: A0A1S3ATC1 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 PE=4 SV=1)

HSP 1 Score: 378 bits (971), Expect = 4.46e-130
Identity = 196/200 (98.00%), Postives = 196/200 (98.00%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPP TQSTSTPSASAQVSG
Sbjct: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPATQSTSTPSASAQVSG 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QPPPPTA SSVPGKKKRGRPRKYGPDGSVSMALSPKPIS SVPPPVIDFSTEKKGKVRP 
Sbjct: 61  QPPPPTAGSSVPGKKKRGRPRKYGPDGSVSMALSPKPISSSVPPPVIDFSTEKKGKVRPV 120

Query: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180
           SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG
Sbjct: 121 SAVSKSKFEVDNLGDWVPCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSANG 180

Query: 181 VISSVTLRQPDSSGGTLTYE 200
           VISSVTLRQPDSSGGTLTYE
Sbjct: 181 VISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL
Match: A0A6J1I241 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111468921 PE=4 SV=1)

HSP 1 Score: 343 bits (880), Expect = 3.16e-116
Identity = 181/201 (90.05%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGG ASSGVTVVGSDAPS+Y+IAPRTSD+PPQTGGST PP TQ TSTPSASAQV  
Sbjct: 1   MEGRDGG-ASSGVTVVGSDAPSKYQIAPRTSDSPPQTGGSTLPPATQPTSTPSASAQVPA 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QP PPTAASSVPGKKKRGRPRKYGPDGSV+MALSPKPIS SVPPPVIDFS EK+GKVRPA
Sbjct: 61  QPTPPTAASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKRGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWV-PCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSAN 180
           S VSK+KFEVDNLGDWV PCS+GANFTPHIITV+AGEDVTMKIISFSQQGPRAIC+LSAN
Sbjct: 121 SGVSKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEDVTMKIISFSQQGPRAICVLSAN 180

Query: 181 GVISSVTLRQPDSSGGTLTYE 200
           GVISSVTLRQPDSSGGTLTYE
Sbjct: 181 GVISSVTLRQPDSSGGTLTYE 200

[Close]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL
Match: A0A6J1E7S0 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111430176 PE=4 SV=1)

HSP 1 Score: 339 bits (870), Expect = 1.05e-114
Identity = 179/201 (89.05%), Postives = 189/201 (94.03%), Query Frame = 0


Query: 1   MEGRDGGGASSGVTVVGSDAPSEYKIAPRTSDNPPQTGGSTTPPGTQSTSTPSASAQVSG 60
           MEGRDGG ASSGVTVVGSDAPS+Y+IAPRTS +PPQTGGST PP TQ TSTPSASAQV  
Sbjct: 1   MEGRDGG-ASSGVTVVGSDAPSKYQIAPRTSGSPPQTGGSTLPPATQPTSTPSASAQVPA 60

Query: 61  QPPPPTAASSVPGKKKRGRPRKYGPDGSVSMALSPKPISLSVPPPVIDFSTEKKGKVRPA 120
           QP PPTAASSVPGKKKRGRPRKYGPDGSV+MALSPKPIS SVPPPVIDFS EK+GKVRPA
Sbjct: 61  QPTPPTAASSVPGKKKRGRPRKYGPDGSVNMALSPKPISSSVPPPVIDFSAEKRGKVRPA 120

Query: 121 SAVSKSKFEVDNLGDWV-PCSLGANFTPHIITVNAGEDVTMKIISFSQQGPRAICILSAN 180
           S V+K+KFEVDNLGDWV PCS+GANFTPHIITV+AGEDVTMKIISFSQQGPRAIC+LSAN
Sbjct: 121 SGVNKTKFEVDNLGDWVVPCSVGANFTPHIITVDAGEDVTMKIISFSQQGPRAICVLSAN 180

Query: 181 GVISSVTLRQPDSSGGTLTYE 200
           GVISSVTLRQPDSSGGTLTYE
Sbjct: 181 GVISSVTLRQPDSSGGTLTYE 200

The following BLAST results are available for this feature:

BLAST of Cucsat.G21389.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYJ2	1.5e-51	59.07	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O49658	4.1e-49	58.13	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q4V3E0	6.6e-31	46.77	AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
O80834	1.6e-29	49.64	AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
Q9SB31	2.3e-28	42.86	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of Cucsat.G21389.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147567.1	8.35e-133	100.00	AT-hook motif nuclear-localized protein 1 [Cucumis sativus] >KGN50187.1 hypothet...	[more]
XP_008437162.1	9.21e-130	98.00	PREDICTED: AT-hook motif nuclear-localized protein 1 [Cucumis melo] >KAA0042841....	[more]
XP_038906607.1	3.06e-128	97.00	AT-hook motif nuclear-localized protein 1 [Benincasa hispida]	[more]
XP_022969838.1	6.53e-116	90.05	AT-hook motif nuclear-localized protein 1-like [Cucurbita maxima]	[more]
XP_023549772.1	1.07e-114	89.55	AT-hook motif nuclear-localized protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G21389.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP42	4.04e-133	100.00	AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_5G1579...	[more]
A0A5A7TMP3	4.46e-130	98.00	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3ATC1	4.46e-130	98.00	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103482669 ...	[more]
A0A6J1I241	3.16e-116	90.05	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111468...	[more]
A0A6J1E7S0	1.05e-114	89.05	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 147..190 e-value: 3.0E-9 score: 37.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 142..210 score: 20.487654
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 146..200 e-value: 6.01904E-12 score: 58.3658
None	No IPR available	GENE3D	3.30.1330.80		coord: 147..206 e-value: 2.9E-10 score: 42.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..103
None	No IPR available	PANTHER	PTHR31500:SF93	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1	coord: 10..201
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 144..197
IPR039605	AT-hook motif nuclear-localized protein	PANTHER	PTHR31500	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9	coord: 10..201

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G21389	Cucsat.G21389	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T3.E1	Cucsat.G21389.T3.E1	exon
Cucsat.G21389.T3.E2	Cucsat.G21389.T3.E2	exon
Cucsat.G21389.T3.E3	Cucsat.G21389.T3.E3	exon
Cucsat.G21389.T3.E4	Cucsat.G21389.T3.E4	exon
Cucsat.G21389.T3.E5	Cucsat.G21389.T3.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T3.C1	Cucsat.G21389.T3.C1	CDS
Cucsat.G21389.T3.C2	Cucsat.G21389.T3.C2	CDS
Cucsat.G21389.T3.C3	Cucsat.G21389.T3.C3	CDS
Cucsat.G21389.T3.C4	Cucsat.G21389.T3.C4	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G21389.T3	Cucsat.G21389.T3-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding