Cucsat.G21094.T2 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G21094.T2
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionSnoaL-like domain-containing protein
Locationctg910: 1537385 .. 1539211 (-)
RNA-Seq ExpressionCucsat.G21094.T2
SyntenyCucsat.G21094.T2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAAAAGGCCCCTAGTCATTCCTCCTTCTGCAGTGAACTACTACTACTACTAATAATGTCCCTTATTACAAGTCCTCAAGCTGTCAACTTTGGGGGCTCCCAATCATTTAGGAGATTTTCTTCTTATACATTCTTGAATAAAAGAACTTCATGTATATTCCAACAAAAGAAGAACTATGGAAACTACAACAAGAGGAAAACAAACAACACACTCGTCCTATCATGTTTAATGGATGATTCCTTTTCCTGCCCAGGTTCAAGTTCAAATTCTCCGGGAGAAATGATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTAAAGGAAATGAGTACTTACATCTCAGAAGACTGCCTCATTGAAGACTCCTTGTTCATTGAAAAATTTAAAGGGAAGAAGGTAAAAATGAGCTATATTAGACATTCCTGTATTTCTGTTCTCATTCATAGAATAGAAATTTGTATTTGTTTTTACTAAGTCCATGGAACCTACCTGCAGGCAGCTATGAGTTTCATTGAAAAACTAACTGAGAGCATGGGTCCAGATGTGAAGTTTAGAATCCGTAAAGTATACGAAAGACACCCTTCCATGGCAGGAGCAATCTGGCATTTAGGTAGTTCGTAGTTCTATATCAAGTTCATCCATTCAATTTATATTCTATCATTCTAAAACATTGACAAACCTAATTATCATTTGGCAGAGTGGAGGAACATGGAGATTCCCTTAACCAAGGGTTGCACCTTCATTGACATCAGAGATGAAGAAAGAAAAACTATACAGTTAGCCATAAATAAACTTAATATCTGATGCTTTCAATCATATTGGAAGAATAAGATCTTGCTTATATTAAAATGCAACTCTTTTACAGGAAGATACAAATTATAAATGAACCACAATTTAAAGCAGGACATCTAATCTTGGTAAGTACAAACAAGCTATCATTTACAACAATTTCAAAACATTTGGAAATGAGTAAAAATCGTTCAATGCTCATTCAATTGAAATCAAAGTAACTTGCGTGTATTAACACATGTTAAATTTGTTGGTCTGACGAGGCTTTGTTCTCTATAACTAATATCAGGATATAATGAAACTTGTGACTTTATTGCTTGCTAAGAATTCAGCAATTTTAGAATGTAAGTCAAATTTAATACCTTTTATGCCATAGATCTTCGTGAGCCGAAGCTTCTCATTAAACATTAAAGATACATAAACTATGTCTCCTGTAGGGTTGATAAAAGCTTCTCAACAACGTTGGGTAAAGTGGATGTCAAAGATCTGTGTAACTCTCTTCAATCTTCTCTTGGACAGCTTTTCGAAGAGCTATCTAACCTTTATACATTTTGGGGCTCAACTATATAGTTGTGTACTCAAATTTTTATATTATATTGTAGATTTTTTCTTGTAAAGGACACACATATAAATTTATTTTGTTCATGGGGATGGGAAAGATTGTGAACATAAAAAATATCCCCTTCTAGTCATCGTTTCCATCACGAGTCAAATACATTTCTAACGAAGAGAAAACAGCCAATGGACCAAGAATGGGAGGCAGTGGTGGAGGCTTATTGAATGCCACAATTGGCTTTTAATTTGCTTTCTCTATGGTAATCAAAGACTCTGCATCAGAATCATTCTTCATTTCTTGCCTTTGTATTGATGAAATTGCAGTCCAACAGTTGTTTCGTGTCAAGAAATTCTAATGCAAGGAAACAAACAGTAAAATTACAGTGTCTTTGGTCCATTGTAACTTTTGTCTATATATTCTCTGTACTTCAAAAACTTAAAAGATTCAATTTAGTTGCGAAATTTTTATGGTTGAATTA

Coding sequence (CDS)

ATGTCCCTTATTACAAGTCCTCAAGCTGTCAACTTTGGGGGCTCCCAATCATTTAGGAGATTTTCTTCTTATACATTCTTGAATAAAAGAACTTCATGTATATTCCAACAAAAGAAGAACTATGGAAACTACAACAAGAGGAAAACAAACAACACACTCGTCCTATCATGTTTAATGGATGATTCCTTTTCCTGCCCAGGTTCAAGTTCAAATTCTCCGGGAGAAATGATTGAGAGATTCTACAAATGCATCAATGAAAAGAACTTAAAGGAAATGAGTACTTACATCTCAGAAGACTGCCTCATTGAAGACTCCTTGTTCATTGAAAAATTTAAAGGGAAGAAGGCAGCTATGAGTTTCATTGAAAAACTAACTGAGAGCATGGGTCCAGATGTGAAGTTTAGAATCCGTAAAGTATACGAAAGACACCCTTCCATGGCAGGAGCAATCTGGCATTTAGAGTGGAGGAACATGGAGATTCCCTTAACCAAGGGTTGCACCTTCATTGACATCAGAGATGAAGAAAGAAAAACTATACAGTTAGCCATAAATAAACTTAATATCTGA

Protein sequence

MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQLAINKLNI
Homology
[Close]
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match: XP_011654728.2 (uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetical protein Csa_000137 [Cucumis sativus])

HSP 1 Score: 370 bits (950), Expect = 8.47e-128
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60
           MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD
Sbjct: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60

Query: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120
           DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF
Sbjct: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120

Query: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180
           IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ
Sbjct: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180

[Close]
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match: XP_008437322.1 (PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo])

HSP 1 Score: 333 bits (853), Expect = 4.97e-113
Identity = 165/182 (90.66%), Postives = 168/182 (92.31%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60
           MSLITSPQAVNFGGS SFRRFS   FLNKRTSCIFQQKKNYGNYNKRKTN  LV SCLMD
Sbjct: 1   MSLITSPQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKKNYGNYNKRKTNVRLVSSCLMD 60

Query: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120
           DSFS   SSSNSPGEMIE FYKCINEKNLK+M+TYISEDCLIEDSLFIEKFKGKKAAMSF
Sbjct: 61  DSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEKFKGKKAAMSF 120

Query: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180
           IEKLTESMGPDVKFRIR VYER PSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ
Sbjct: 121 IEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180

Query: 181 LA 182
           + 
Sbjct: 181 MV 182

[Close]
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match: XP_038906943.1 (uncharacterized protein LOC120092809 [Benincasa hispida])

HSP 1 Score: 268 bits (686), Expect = 1.70e-87
Identity = 141/193 (73.06%), Postives = 151/193 (78.24%), Query Frame = 0 

Query: 1   MSLITSP---QAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTL---- 60
           MSLI SP   QAVN GGSQS RRFS  TFL KR+SCI QQKKNYGN  K+KTNN L    
Sbjct: 1   MSLIISPPPPQAVNLGGSQSLRRFSC-TFLTKRSSCILQQKKNYGNCKKKKTNNRLSTDV 60

Query: 61  ----VLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIE 120
               V SCL DDSFS   S SNSP EMIERFYKCINEKNLKE+S+YISEDC IEDSLF+E
Sbjct: 61  KLHFVSSCLKDDSFSRLDSRSNSPSEMIERFYKCINEKNLKELSSYISEDCHIEDSLFVE 120

Query: 121 KFKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFI 180
            F GKKAA+ F E+LT SMGPDVKFRI  +YER  S  GAIWHLEW+NMEIP TKGCTFI
Sbjct: 121 PFIGKKAALRFFEELTHSMGPDVKFRIHNIYERRVSSVGAIWHLEWKNMEIPFTKGCTFI 180

Query: 181 DIRDEERKTIQLA 182
           DIR+EERKTIQ A
Sbjct: 181 DIRNEERKTIQKA 192

[Close]
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match: XP_008437324.1 (PREDICTED: uncharacterized protein LOC103482777 isoform X2 [Cucumis melo])

HSP 1 Score: 236 bits (601), Expect = 1.50e-75
Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 59  MDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAM 118
           MDDSFSC GSSSNSPGEMIE FYKCINEKNLKEMSTYISEDCLIED+LF EKFKGKKAAM
Sbjct: 1   MDDSFSCSGSSSNSPGEMIEIFYKCINEKNLKEMSTYISEDCLIEDTLFSEKFKGKKAAM 60

Query: 119 SFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKT 178
           SFIEKLTESMGPD+KFRIRKVYER PS A AIWHLEWRNMEIPLTKGCTFIDIRDEERKT
Sbjct: 61  SFIEKLTESMGPDMKFRIRKVYERRPSTARAIWHLEWRNMEIPLTKGCTFIDIRDEERKT 120

Query: 179 IQLA 182
           IQ+ 
Sbjct: 121 IQMV 124

[Close]
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match: XP_022156737.1 (uncharacterized protein LOC111023569 isoform X3 [Momordica charantia] >XP_022156743.1 uncharacterized protein LOC111023569 isoform X3 [Momordica charantia])

HSP 1 Score: 201 bits (511), Expect = 1.07e-61
Identity = 110/193 (56.99%), Postives = 138/193 (71.50%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKN----YGNY----NKRKTNNT 60
           M+LI SP  ++ G SQSFR    YT L K +SC+FQQKK     YG++    NKR + + 
Sbjct: 1   MALIRSPPPISLG-SQSFRNLP-YTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60

Query: 61  ---LVLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIE 120
               V SCL DDS SC  S+SN   EMIE FY+CINEKNL+E+ +YISEDC+IEDSLFIE
Sbjct: 61  KLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120

Query: 121 KFKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFI 180
            F+G+K A+ F E+LT+SMG  VKFRI  VYE   S AGAIW L W+++EIP +KGCTFI
Sbjct: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFI 180

Query: 181 DIRDEERKTIQLA 182
           +IR+E+R+ IQ A
Sbjct: 181 NIRNEKRRAIQKA 191

[Close]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match: A0A0A0KMI4 (SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 9.15e-128
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60
           MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD
Sbjct: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60

Query: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120
           DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF
Sbjct: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120

Query: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180
           IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ
Sbjct: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180

[Close]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match: A0A1S3ATV9 (uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482777 PE=4 SV=1)

HSP 1 Score: 333 bits (853), Expect = 2.40e-113
Identity = 165/182 (90.66%), Postives = 168/182 (92.31%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLVLSCLMD 60
           MSLITSPQAVNFGGS SFRRFS   FLNKRTSCIFQQKKNYGNYNKRKTN  LV SCLMD
Sbjct: 1   MSLITSPQAVNFGGSPSFRRFSYTLFLNKRTSCIFQQKKNYGNYNKRKTNVRLVSSCLMD 60

Query: 61  DSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAMSF 120
           DSFS   SSSNSPGEMIE FYKCINEKNLK+M+TYISEDCLIEDSLFIEKFKGKKAAMSF
Sbjct: 61  DSFSYSSSSSNSPGEMIEMFYKCINEKNLKKMNTYISEDCLIEDSLFIEKFKGKKAAMSF 120

Query: 121 IEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180
           IEKLTESMGPDVKFRIR VYER PSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ
Sbjct: 121 IEKLTESMGPDVKFRIRTVYERRPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKTIQ 180

Query: 181 LA 182
           + 
Sbjct: 181 MV 182

[Close]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match: A0A1S3AUC2 (uncharacterized protein LOC103482777 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482777 PE=4 SV=1)

HSP 1 Score: 236 bits (601), Expect = 7.24e-76
Identity = 114/124 (91.94%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 59  MDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEKFKGKKAAM 118
           MDDSFSC GSSSNSPGEMIE FYKCINEKNLKEMSTYISEDCLIED+LF EKFKGKKAAM
Sbjct: 1   MDDSFSCSGSSSNSPGEMIEIFYKCINEKNLKEMSTYISEDCLIEDTLFSEKFKGKKAAM 60

Query: 119 SFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFIDIRDEERKT 178
           SFIEKLTESMGPD+KFRIRKVYER PS A AIWHLEWRNMEIPLTKGCTFIDIRDEERKT
Sbjct: 61  SFIEKLTESMGPDMKFRIRKVYERRPSTARAIWHLEWRNMEIPLTKGCTFIDIRDEERKT 120

Query: 179 IQLA 182
           IQ+ 
Sbjct: 121 IQMV 124

[Close]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match: A0A6J1DSR1 (uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023569 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 5.17e-62
Identity = 110/193 (56.99%), Postives = 138/193 (71.50%), Query Frame = 0 

Query: 1   MSLITSPQAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKN----YGNY----NKRKTNNT 60
           M+LI SP  ++ G SQSFR    YT L K +SC+FQQKK     YG++    NKR + + 
Sbjct: 1   MALIRSPPPISLG-SQSFRNLP-YTALPKISSCVFQQKKTTVLKYGDWMRKTNKRSSTDV 60

Query: 61  ---LVLSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIE 120
               V SCL DDS SC  S+SN   EMIE FY+CINEKNL+E+ +YISEDC+IEDSLFIE
Sbjct: 61  KLRFVPSCLPDDSDSCLDSNSNPSSEMIENFYRCINEKNLEELGSYISEDCVIEDSLFIE 120

Query: 121 KFKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFI 180
            F+G+K A+ F E+LT+SMG  VKFRI  VYE   S AGAIW L W+++EIP +KGCTFI
Sbjct: 121 PFQGRKEALEFFEELTQSMGRYVKFRILNVYESGTSGAGAIWRLAWKDIEIPFSKGCTFI 180

Query: 181 DIRDEERKTIQLA 182
           +IR+E+R+ IQ A
Sbjct: 181 NIRNEKRRAIQKA 191

[Close]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match: A0A6J1I4H1 (uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 7.20e-62
Identity = 115/192 (59.90%), Postives = 136/192 (70.83%), Query Frame = 0 

Query: 1   MSLITSP--QAVNFGGSQSFRRFSSYTFLNKRTSCIFQQKKNYGNYNKRKTNNTLV---- 60
           M+LITSP  QA+  G SQ FR F+ YT + K+ S +FQQKK       RKT+ TLV    
Sbjct: 1   MALITSPPPQALTLG-SQPFRTFA-YTSIPKKPSSLFQQKK------LRKTSYTLVTDVK 60

Query: 61  ----LSCLMDDSFSCPGSSSNSPGEMIERFYKCINEKNLKEMSTYISEDCLIEDSLFIEK 120
               LSCL D S     S SNSP EM+++FY+CINEK LKE+S+YISEDCLIEDSLF E 
Sbjct: 61  PRFVLSCLKDGSVCSLDSCSNSPSEMVKKFYECINEKKLKELSSYISEDCLIEDSLFDEA 120

Query: 121 FKGKKAAMSFIEKLTESMGPDVKFRIRKVYERHPSMAGAIWHLEWRNMEIPLTKGCTFID 180
           F GK+AA+ F ++LT+SMGPDVKFR R VYE   S AGA WHL W+N +IP TKGCTFID
Sbjct: 121 FIGKEAALKFFKELTQSMGPDVKFRFRNVYESGTSRAGATWHLVWKNTKIPFTKGCTFID 180

Query: 181 IRDEERKTIQLA 182
           I +EER TIQ A
Sbjct: 181 INNEER-TIQKA 183

The following BLAST results are available for this feature:
BLAST of Cucsat.G21094.T2 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G21094.T2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011654728.28.47e-128100.00uncharacterized protein LOC101214565 [Cucumis sativus] >KAE8647850.1 hypothetica... [more]
XP_008437322.14.97e-11390.66PREDICTED: uncharacterized protein LOC103482777 isoform X1 [Cucumis melo][more]
XP_038906943.11.70e-8773.06uncharacterized protein LOC120092809 [Benincasa hispida][more]
XP_008437324.11.50e-7591.94PREDICTED: uncharacterized protein LOC103482777 isoform X2 [Cucumis melo][more]
XP_022156737.11.07e-6156.99uncharacterized protein LOC111023569 isoform X3 [Momordica charantia] >XP_022156... [more]
BLAST of Cucsat.G21094.T2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMI49.15e-128100.00SnoaL-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152840 ... [more]
A0A1S3ATV92.40e-11390.66uncharacterized protein LOC103482777 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUC27.24e-7691.94uncharacterized protein LOC103482777 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1DSR15.17e-6256.99uncharacterized protein LOC111023569 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1I4H17.20e-6259.90uncharacterized protein LOC111469081 OS=Cucurbita maxima OX=3661 GN=LOC111469081... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.50coord: 65..177
e-value: 5.1E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR33698NUCLEAR TRANSPORT FACTOR 2 (NTF2)-LIKE PROTEINcoord: 18..182
NoneNo IPR availablePANTHERPTHR33698:SF1NUCLEAR TRANSPORT FACTOR 2 (NTF2) FAMILY PROTEINcoord: 18..182
IPR037401SnoaL-like domainPFAMPF12680SnoaL_2coord: 77..174
e-value: 5.2E-7
score: 30.2
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 74..173

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G21094Cucsat.G21094gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21094.T2.E1Cucsat.G21094.T2.E1exon
Cucsat.G21094.T2.E2Cucsat.G21094.T2.E2exon
Cucsat.G21094.T2.E3Cucsat.G21094.T2.E3exon
Cucsat.G21094.T2.E4Cucsat.G21094.T2.E4exon
Cucsat.G21094.T2.E5Cucsat.G21094.T2.E5exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G21094.T2.C3Cucsat.G21094.T2.C3CDS
Cucsat.G21094.T2.C2Cucsat.G21094.T2.C2CDS
Cucsat.G21094.T2.C1Cucsat.G21094.T2.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G21094.T2Cucsat.G21094.T2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane