Cucsat.G21014.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATTGATAATATTGTTTTTGTATGGTGGAGAGATGAAAAGGAAGGTAGAAAAAGATGGAAGTAGGAATGAATGTAATGGGGAATGGGGATGACATATTTCTTCTCACTCTCAAATTGTAATAAAGTCTCTCAACCAACTCCACACCCAATATAATATCTCTCTCTCACACTCTCTACACTCACATATCTATTTACTCATAATTACTACCAACCAAATCTTCCTTATTTTTCTATCTCCCTACCCCCATGTGCTCGGAGCCACCGCATAGCACCCATCATCCCCCCACCTCCACCCCGACGCTACCTCTGTCTTGGCTTCCAGTACTGGAGCCCCCATGGATGCCAACCCCCCCGCGTTTAACTTTGGTCTCTGTCCCCTTTTTGTGGGAGGAGGCGCCGGGGAAGCCGAGGCGGCCATCTGCTGCATCAAAAGTTCTGTGGCAGGTTCCCGTGGTGGCCGCCGGGAAGCTGCCTCCCCCACCACGGCTTTTGAAGAACGAGGTGGTGAAACAAAGCAACAATCTAGCGTCGCCAACGAGGGTTGTAGAGGGAGATGATCAAAGGGGTGGGGTGGTGGTGGGATCAAAGAGATGGGGTTCTTTTAGGATGTGTGACAGTAATGGAAGCGGGAGGTTTCGAAGGGGAAGATCAGCTTCATCATCGTCATTGTCACTTTCGTCTTATGCAACTTCACACTTCCTGGTAATTATCTCCAAATATTTCCAATTAATCATTCTTTAAGATACTTTGCTTTTGCTTTTCCTGAATAATCTATCACCATATAGTTTCAATTTTTAAAAGGTTAATTTGTAGTTTAATTCTTTGGTTTTTCAAAATCTATAGTTTCATTTCTTGCTTATATCTTGATTTCTTAAATATACATAATATGTCACTCAAATGCTATCAAATATTTGAGGGATGAGTAATCAAATTAACAAAATTTATTAGCCAACTTAATTCTACAACACATGTCTAAATACATTAATAAAAATGACAATTCAAAGATACAACAAATTTCTATAAAATGAACCCTTAATTAATTAAAAATCTCTAATAATTATTCATAGTTTTGATAGTTAAGCTAGAAAATTAATTTTGTGAATATTTTATATATATATGGAAAAGAGTTAATTAGAAATCAGAAGATATAAAGTCAAAGTAACTATAGATATATAGTAATATTTGTGTATGATGATGATGTTGGTTGATGGAAAGTTAATTATATGATCAATTATTTAAGGCAATAGTAGTTTACATGTTAGAATGAGGCTTAGATTTAATATATGCTAAAGACAAAAGTAAAATATTAATAATAAGTAGCTAGAAATTTGTAATGACCCACCCACCACTAAACTTTTTGACAATAAGAGAGAATAATACACACATTTTCTTTGAAAGCAAAGGATGTGTTGAAATTTTTATTTAGTTCATAAAATATTTGAAGTGGACGATGATATATATATATATATTAGACTAATTGTATTGTGTTTGATATCGACCAATTAATCTGTGTTAGAAATTAGTTATAGTTACTTTTAATTATATTTTGTTAGTTGTTATTAGTTAATACTATATAGTAAGAGTTGTCATTAATGAATTATTTTGTTTATTATATAGTTTGAACCCATTTTGTGTCTAAACATCAATATTGCAGGTGAATATCTATGAAAGCTTTAAACAGATTGTCCCATGGAGAAGAAGAAGAACAAGATAGTTATTAATTAACTATAAAAAATTAAGTCTTTAATTTGCATATGCTTTTAAGTCTATAAATATATATAAATTAGAGAACTGATCAGTACCAAGTTTAAAAATTGTATATGTTATATATAAGAGATATTTGAGACAATTGATTTAGTATAACTCAACACATATTATTTTACCTTAAAAATATTTTAACGTAAGTTTCTATAGATTTATGAACGATTGATCATTCATTTACTCTAGAACGAAGAAGGTAAATGAGATAGAGAGTTGTTACGAGTTGAGATTAAGTCTTGATAATAAAAAAGATCGATAA ATGTGCTCGGAGCCACCGCATAGCACCCATCATCCCCCCACCTCCACCCCGACGCTACCTCTGTCTTGGCTTCCAGTACTGGAGCCCCCATGGATGCCAACCCCCCCGCGTTTAACTTTGGTCTCTGTCCCCTTTTTGTGGGAGGAGGCGCCGGGGAAGCCGAGGCGGCCATCTGCTGCATCAAAAGTTCTGTGGCAGGTTCCCGTGGTGGCCGCCGGGAAGCTGCCTCCCCCACCACGGCTTTTGAAGAACGAGGTGGTGAAACAAAGCAACAATCTAGCGTCGCCAACGAGGGTTGTAGAGGGAGATGATCAAAGGGGTGGGGTGGTGGTGGGATCAAAGAGATGGGGTTCTTTTAGGATGTGTGACAGTAATGGAAGCGGGAGGTTTCGAAGGGGAAGATCAGCTTCATCATCGTCATTGTCACTTTCGTCTTATGCAACTTCACACTTCCTGGTGAATATCTATGAAAGCTTTAAACAGATTGTCCCATGGAGAAGAAGAAGAACAAGATAG MCSEPPHSTHHPPTSTPTLPLSWLPVLEPPWMPTPPRLTLVSVPFLWEEAPGKPRRPSAASKVLWQVPVVAAGKLPPPPRLLKNEVVKQSNNLASPTRVVEGDDQRGGVVVGSKRWGSFRMCDSNGSGRFRRGRSASSSSLSLSSYATSHFLVNIYESFKQIVPWRRRRTR Homology
BLAST of Cucsat.G21014.T1 vs. NCBI nr
Match: XP_011654611.1 (uncharacterized protein LOC105435423 [Cucumis sativus] >KGN49860.1 hypothetical protein Csa_000268 [Cucumis sativus]) HSP 1 Score: 342 bits (876), Expect = 2.14e-118 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. NCBI nr
Match: KAA0042546.1 (uncharacterized protein E6C27_scaffold44G00400 [Cucumis melo var. makuwa] >TYK05950.1 uncharacterized protein E5676_scaffold376G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 261 bits (667), Expect = 1.35e-86 Identity = 149/175 (85.14%), Postives = 159/175 (90.86%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. NCBI nr
Match: XP_008437607.1 (PREDICTED: uncharacterized protein LOC103482969 [Cucumis melo]) HSP 1 Score: 258 bits (658), Expect = 3.16e-85 Identity = 148/175 (84.57%), Postives = 158/175 (90.29%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. NCBI nr
Match: XP_022958693.1 (uncharacterized protein LOC111459844 [Cucurbita moschata]) HSP 1 Score: 155 bits (392), Expect = 9.88e-45 Identity = 100/184 (54.35%), Postives = 118/184 (64.13%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. NCBI nr
Match: XP_038875428.1 (uncharacterized protein LOC120067888 [Benincasa hispida]) HSP 1 Score: 149 bits (375), Expect = 2.43e-42 Identity = 103/171 (60.23%), Postives = 114/171 (66.67%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. ExPASy TrEMBL
Match: A0A0A0KJF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139380 PE=4 SV=1) HSP 1 Score: 342 bits (876), Expect = 1.04e-118 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. ExPASy TrEMBL
Match: A0A5A7TKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00430 PE=4 SV=1) HSP 1 Score: 261 bits (667), Expect = 6.52e-87 Identity = 149/175 (85.14%), Postives = 159/175 (90.86%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. ExPASy TrEMBL
Match: A0A1S3AU39 (uncharacterized protein LOC103482969 OS=Cucumis melo OX=3656 GN=LOC103482969 PE=4 SV=1) HSP 1 Score: 258 bits (658), Expect = 1.53e-85 Identity = 148/175 (84.57%), Postives = 158/175 (90.29%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. ExPASy TrEMBL
Match: A0A6J1H3S6 (uncharacterized protein LOC111459844 OS=Cucurbita moschata OX=3662 GN=LOC111459844 PE=4 SV=1) HSP 1 Score: 155 bits (392), Expect = 4.79e-45 Identity = 100/184 (54.35%), Postives = 118/184 (64.13%), Query Frame = 0
BLAST of Cucsat.G21014.T1 vs. ExPASy TrEMBL
Match: A0A6J1K7H0 (uncharacterized protein At4g00950-like OS=Cucurbita maxima OX=3661 GN=LOC111491336 PE=4 SV=1) HSP 1 Score: 147 bits (371), Expect = 7.24e-42 Identity = 98/183 (53.55%), Postives = 116/183 (63.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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