Cucsat.G2037.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G2037.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein trichome birefringence-like
Location	ctg1002: 5829995 .. 5831856 (-)
RNA-Seq Expression	Cucsat.G2037.T4
Synteny	Cucsat.G2037.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAGTAGTAATAATAATTAACAGGAATAATAATTTTCGCTGTTCAATAATTTATAATAATACCAAACCAATGAAGAAGAGGAAAAATCCGGTGTGTGCAGGACTATGGAGTAAGCTTGCTTCTTTACAGAACGCCCTACCTTGTGGACGTAGTGAAAGAGAGGATTGGAAGAGTACTAAAGCTTGATTCCATTGAAGGAGGCAATGTGTGGAAGGGAATGGATGTGCTCATATTCAACTCATGGCACTGGTGGACCCACACAGGAAGATCCCAGCCGTATGATCAATCTCTTATTTTCATGATCATTCTGATGTGGTAGGTGATGGTAAAATCTGACGGTTGTGAGTGTTGTTGATCAGGTGGGATTATGTGCAAGTAGGAAACACAGTGAAGAAAGATATGGACCGTCTAGAGGCATTCTATCAAGGGTTGACCACCTGGGCGAGATGGGTGGAAATGAATGTTGATCCCAGTAAAACCAAGGTCATTTTCCAGGGAATCTCCCCCACTCATTATGAGTAAGTACAGATCAATGGCTGCCATTCCTTCTTCTATCAAAGTAATTTTTTCTAAACTTTAAAACTTTCAAAATATATATTTGATAAATCTTCATTTCTATAAAGACAAGAAAACAAGTTTTTTCCTCTACTGGGTTAAGGACGAGGTGTGAATCACAAGTTTTTTCCTCTACTGGGTTAAGGACGAGGTGTGAATCCCGACCCCACCCTTCCAAGTTGTGATATATATATATATATATATATCCCCACACCACGAGAGGTTAAAGTAAAATTTTCGTCATTTGGCTATGTATCCATTTTAATACTTCTCCAGCATTTTGGCAAGCTCAGAACATTTATAAACACTTCTGTCCACGGAGAAGGCAGCATTGTCACGTATCCATGTCGGATGCTGTGACATTAATTCCTTTAATAATCGATACCCTCATCATAAAATTCACAGTAAATTTTATATTTTCTTTTGTAATTTTATCATAGGTAGTTGGTAGCGATAAAATTGGTCAAACTATACATACGAAAGTGGAAATTGACGTGCAGTTCGAGGACAAAAAATTATTTTAACTGGTCTGCCGACGAAAATAAGTTGTCCAAATTTTGTCCAGCTCAATTTAATGCATTACTATTCTTATTTTTCTTGTACCTATTTTCTCGTTGAGGAGTAATTCTCAGACCAGAAAACTAATTATCTGCATAATATAGGAATAAGACTTTGCATTTTCTTCTTAACTCTAAAATCTTAAGTTTCTACCTTATCAGGGGAAAGGATTGGAACCAACCAAAGAGGAGTTGCAACGGAGAAAGTGTACCACTCTCGGGGTCACTGTATCCAGCAGGGACACCCCCCGCTGCAGAAATTGTGAAGAGAGTGCTGAGTAGAATGAGGAAGCCAGTTTTCTTGCTGGACATTACAACGTTGTCACAACTGCGGAAAGATGCTCATCCCTCTACTTACAGTGGCGAGCATGGGAGAGATTGCAGCCATTGGTGCCTTCCCGGTTTGCCCGACACTTGGAATGAGCTTCTCTACGCAGCTTTCACCATGTGAAGGCCAACCGCGAAACACTTGAAGCTCTTTTCGTCTCTGCGATTCCTCAAAGGGCGTGTTAGATGATAGAACTTCATTCATTTGATTAACCACCTTAACGGTAATTGGAAGCAAGAAATGTAATGCAACAAAGCAATTGTACTAAAATTAATGTAATGGCAACAAAGCAATTGTATAAAGTATTTTAGTTGTTGGATTTTCTGAAAATAGTTTCAAATCGACAAGGAAAGAAAGAATACTGGTGACTGGTGAGACATGGAATGAAGATAGCTGTTTGAAATTAAATTGGATAACATGC

Coding sequence (CDS)

ATGGATGTGCTCATATTCAACTCATGGCACTGGTGGACCCACACAGGAAGATCCCAGCCGTGGGATTATGTGCAAGTAGGAAACACAGTGAAGAAAGATATGGACCGTCTAGAGGCATTCTATCAAGGGTTGACCACCTGGGCGAGATGGGTGGAAATGAATGTTGATCCCAGTAAAACCAAGGTCATTTTCCAGGGAATCTCCCCCACTCATTATGAGGGAAAGGATTGGAACCAACCAAAGAGGAGTTGCAACGGAGAAAGTGTACCACTCTCGGGGTCACTGTATCCAGCAGGGACACCCCCCGCTGCAGAAATTGTGAAGAGAGTGCTGAGTAGAATGAGGAAGCCAGTTTTCTTGCTGGACATTACAACGTTGTCACAACTGCGGAAAGATGCTCATCCCTCTACTTACAGTGGCGAGCATGGGAGAGATTGCAGCCATTGGTGCCTTCCCGGTTTGCCCGACACTTGGAATGAGCTTCTCTACGCAGCTTTCACCATGTGA

Protein sequence

MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKTKVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFLLDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM

Homology

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot
Match: Q8VY22 (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 9.2e-76
Identity = 116/168 (69.05%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVL+FNSWHWWTH G+SQ WDY++ G+++ +DM+RL+AFY+GL+TWARWV+ NVD +KT
Sbjct: 213 MDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKT 272

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +V FQGISPTHYEG++WN+P+++C+G+  PL GS YP+G PP++ +V +VLS M+KPV L
Sbjct: 273 RVFFQGISPTHYEGREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTL 332

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 169
           LDITTLSQLRKDAHPS+Y G+ G DCSHWCLPGLPDTWN+LLYAA TM
Sbjct: 333 LDITTLSQLRKDAHPSSYGGDGGTDCSHWCLPGLPDTWNQLLYAALTM 380

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot
Match: O22960 (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2)

HSP 1 Score: 275.8 bits (704), Expect = 3.3e-73
Identity = 116/169 (68.64%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTG-RSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSK 60
           MD+L+FNSWHWWTHTG +SQ WD+++ G+++ +DMDRL+AF +GLTTW +WV+ NV+ S+
Sbjct: 217 MDLLVFNSWHWWTHTGVQSQGWDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQ 276

Query: 61  TKVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVF 120
           T+V FQGISPTHY G++WN+P+++CNG+  PL+GS YP G+ PAA IV RVLS MR PV+
Sbjct: 277 TRVFFQGISPTHYMGREWNEPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVY 336

Query: 121 LLDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 169
           LLDITTLSQLRKDAHPSTY G+ G DCSHWCLPGLPDTWN+LLYAA +M
Sbjct: 337 LLDITTLSQLRKDAHPSTYGGDGGTDCSHWCLPGLPDTWNQLLYAALSM 385

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot
Match: Q9SIN2 (Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.2e-67
Identity = 111/165 (67.27%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHT   QPWDY++ GN + KDM+RL AFY+G+TTWARWV   VDPSKT
Sbjct: 198 MDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKT 257

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           KV F G+SPTHYEGKDW +P  SC  ++ P  G  YP GTP A  I+ +V+ R++KPV  
Sbjct: 258 KVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHW 317

Query: 121 LDITTLSQLRKDAHPSTYSGEH-GRDCSHWCLPGLPDTWNELLYA 165
           LDIT LSQLRKDAHPS +SG H G DCSHWCLPGLPDTWN L Y+
Sbjct: 318 LDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYS 362

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot
Match: Q67XC4 (Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 PE=2 SV=2)

HSP 1 Score: 253.4 bits (646), Expect = 1.7e-66
Identity = 106/168 (63.10%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHT   QPWDY++ GN + KDM+RL A+Y+GL TWARW+  N+ PS+T
Sbjct: 196 MDVLIFNSWHWWTHTSGLQPWDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRT 255

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +V FQG+SP HY+G++WN+P +SCNG++ P  G  YP G P    +V +VLSR+RKPV L
Sbjct: 256 QVFFQGVSPVHYDGREWNEPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHL 315

Query: 121 LDITTLSQLRKDAHPSTYSG-EHGRDCSHWCLPGLPDTWNELLYAAFT 168
           LD+TTLS+ RKDAHPS Y+G     DCSHWCLPGLPDTWN LLY++ T
Sbjct: 316 LDLTTLSEYRKDAHPSLYNGISKDLDCSHWCLPGLPDTWNLLLYSSLT 363

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot
Match: Q9ZV89 (Protein trichome birefringence-like 42 OS=Arabidopsis thaliana OX=3702 GN=TBL42 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 5.6e-57
Identity = 90/166 (54.22%), Postives = 123/166 (74.10%), Query Frame = 0


Query: 2   DVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKTK 61
           DV IFN++HWW+HTGR++ WDY Q G+ + K+M+R+EAF   LTTW++W++ N+DPSKT+
Sbjct: 190 DVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALTTWSKWIDHNIDPSKTR 249

Query: 62  VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFLL 121
           V +QG+SP H  G +W +P ++C GE+VP+ G  YP        IVK V+ RM KPV LL
Sbjct: 250 VFYQGVSPVHLNGGEWGKPGKTCLGETVPVQGPSYPGRPNEGEAIVKSVIGRMAKPVELL 309

Query: 122 DITTLSQLRKDAHPSTYSGEHGR--DCSHWCLPGLPDTWNELLYAA 166
           D+T ++++RKD HPS Y+G   R  DCSHWCLPG+PD WN+LLY A
Sbjct: 310 DVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLLYTA 355

[Close]

BLAST of Cucsat.G2037.T4 vs. NCBI nr
Match: KAE8647718.1 (hypothetical protein Csa_003453 [Cucumis sativus])

HSP 1 Score: 370 bits (949), Expect = 2.20e-128
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT
Sbjct: 82  MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 141

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL
Sbjct: 142 KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 201

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 202 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 249

[Close]

BLAST of Cucsat.G2037.T4 vs. NCBI nr
Match: XP_004134666.1 (protein trichome birefringence-like 38 isoform X1 [Cucumis sativus])

HSP 1 Score: 370 bits (949), Expect = 1.09e-126
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL
Sbjct: 255 KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. NCBI nr
Match: XP_008439751.1 (PREDICTED: protein trichome birefringence-like 38 [Cucumis melo] >TYK13198.1 protein trichome birefringence-like 38 [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 7.30e-125
Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTV+KDMDRLEAFYQGLTTWARWVEMNVDP+KT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVRKDMDRLEAFYQGLTTWARWVEMNVDPTKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEI+KRVLSRMRKPVFL
Sbjct: 255 RVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEILKRVLSRMRKPVFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. NCBI nr
Match: KAA0052629.1 (protein trichome birefringence-like 38 [Cucumis melo var. makuwa])

HSP 1 Score: 365 bits (937), Expect = 9.54e-125
Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTV+KDMDRLEAFYQGLTTWARWVEMNVDP+KT
Sbjct: 203 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVRKDMDRLEAFYQGLTTWARWVEMNVDPTKT 262

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEI+KRVLSRMRKPVFL
Sbjct: 263 RVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEILKRVLSRMRKPVFL 322

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 323 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 370

[Close]

BLAST of Cucsat.G2037.T4 vs. NCBI nr
Match: XP_038883707.1 (protein trichome birefringence-like 38 [Benincasa hispida])

HSP 1 Score: 362 bits (930), Expect = 8.46e-124
Identity = 163/168 (97.02%), Postives = 166/168 (98.81%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTH GRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT
Sbjct: 195 MDVLIFNSWHWWTHKGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQP+RSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKP+FL
Sbjct: 255 RVIFQGISPTHYEGKDWNQPRRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPIFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHG DCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGTDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL
Match: A0A0A0KLN5 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519500 PE=3 SV=1)

HSP 1 Score: 370 bits (949), Expect = 5.29e-127
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL
Sbjct: 255 KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL
Match: A0A5D3CPU7 (Protein trichome birefringence-like 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008110 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 3.53e-125
Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTV+KDMDRLEAFYQGLTTWARWVEMNVDP+KT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVRKDMDRLEAFYQGLTTWARWVEMNVDPTKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEI+KRVLSRMRKPVFL
Sbjct: 255 RVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEILKRVLSRMRKPVFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL
Match: A0A1S3B046 (protein trichome birefringence-like 38 OS=Cucumis melo OX=3656 GN=LOC103484456 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 3.53e-125
Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTV+KDMDRLEAFYQGLTTWARWVEMNVDP+KT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVRKDMDRLEAFYQGLTTWARWVEMNVDPTKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEI+KRVLSRMRKPVFL
Sbjct: 255 RVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEILKRVLSRMRKPVFL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 315 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 362

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL
Match: A0A5A7UGJ5 (Protein trichome birefringence-like 38 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002380 PE=3 SV=1)

HSP 1 Score: 365 bits (937), Expect = 4.62e-125
Identity = 164/168 (97.62%), Postives = 168/168 (100.00%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVGNTV+KDMDRLEAFYQGLTTWARWVEMNVDP+KT
Sbjct: 203 MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVRKDMDRLEAFYQGLTTWARWVEMNVDPTKT 262

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEI+KRVLSRMRKPVFL
Sbjct: 263 RVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEILKRVLSRMRKPVFL 322

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM
Sbjct: 323 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 370

[Close]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL
Match: A0A6J1ECI9 (protein trichome birefringence-like 38 OS=Cucurbita moschata OX=3662 GN=LOC111433071 PE=3 SV=1)

HSP 1 Score: 348 bits (893), Expect = 1.78e-118
Identity = 158/169 (93.49%), Postives = 164/169 (97.04%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHTGRSQPWDYVQVG TVKKDM+RLEAFYQGLTTWARWVEMNVDPSKT
Sbjct: 195 MDVLIFNSWHWWTHTGRSQPWDYVQVGTTVKKDMNRLEAFYQGLTTWARWVEMNVDPSKT 254

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +VIFQGISPTHYEGKDWNQP+RSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMR PV+L
Sbjct: 255 RVIFQGISPTHYEGKDWNQPRRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRTPVYL 314

Query: 121 LDITTLSQLRKDAHPSTYSGEH-GRDCSHWCLPGLPDTWNELLYAAFTM 168
           LDITTLSQLRKD+HPS YSGEH G DCSHWCLPGLPDTWN+LLYAAFTM
Sbjct: 315 LDITTLSQLRKDSHPSIYSGEHAGTDCSHWCLPGLPDTWNQLLYAAFTM 363

[Close]

BLAST of Cucsat.G2037.T4 vs. TAIR 10
Match: AT1G29050.1 (TRICHOME BIREFRINGENCE-LIKE 38 )

HSP 1 Score: 284.3 bits (726), Expect = 6.5e-77
Identity = 116/168 (69.05%), Postives = 148/168 (88.10%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVL+FNSWHWWTH G+SQ WDY++ G+++ +DM+RL+AFY+GL+TWARWV+ NVD +KT
Sbjct: 213 MDVLVFNSWHWWTHKGQSQGWDYIRDGSSLVRDMNRLDAFYKGLSTWARWVDQNVDTAKT 272

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +V FQGISPTHYEG++WN+P+++C+G+  PL GS YP+G PP++ +V +VLS M+KPV L
Sbjct: 273 RVFFQGISPTHYEGREWNEPRKTCSGQMQPLGGSSYPSGQPPSSGVVSKVLSSMKKPVTL 332

Query: 121 LDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 169
           LDITTLSQLRKDAHPS+Y G+ G DCSHWCLPGLPDTWN+LLYAA TM
Sbjct: 333 LDITTLSQLRKDAHPSSYGGDGGTDCSHWCLPGLPDTWNQLLYAALTM 380

[Close]

BLAST of Cucsat.G2037.T4 vs. TAIR 10
Match: AT2G34070.1 (TRICHOME BIREFRINGENCE-LIKE 37 )

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-74
Identity = 116/169 (68.64%), Postives = 146/169 (86.39%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTG-RSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSK 60
           MD+L+FNSWHWWTHTG +SQ WD+++ G+++ +DMDRL+AF +GLTTW +WV+ NV+ S+
Sbjct: 217 MDLLVFNSWHWWTHTGVQSQGWDFIRDGSSLMRDMDRLDAFNKGLTTWGQWVDQNVNVSQ 276

Query: 61  TKVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVF 120
           T+V FQGISPTHY G++WN+P+++CNG+  PL+GS YP G+ PAA IV RVLS MR PV+
Sbjct: 277 TRVFFQGISPTHYMGREWNEPRKTCNGQMQPLTGSTYPGGSLPAASIVSRVLSTMRTPVY 336

Query: 121 LLDITTLSQLRKDAHPSTYSGEHGRDCSHWCLPGLPDTWNELLYAAFTM 169
           LLDITTLSQLRKDAHPSTY G+ G DCSHWCLPGLPDTWN+LLYAA +M
Sbjct: 337 LLDITTLSQLRKDAHPSTYGGDGGTDCSHWCLPGLPDTWNQLLYAALSM 385

[Close]

BLAST of Cucsat.G2037.T4 vs. TAIR 10
Match: AT2G42570.1 (TRICHOME BIREFRINGENCE-LIKE 39 )

HSP 1 Score: 257.3 bits (656), Expect = 8.5e-69
Identity = 111/165 (67.27%), Postives = 128/165 (77.58%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHT   QPWDY++ GN + KDM+RL AFY+G+TTWARWV   VDPSKT
Sbjct: 198 MDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKT 257

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           KV F G+SPTHYEGKDW +P  SC  ++ P  G  YP GTP A  I+ +V+ R++KPV  
Sbjct: 258 KVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHW 317

Query: 121 LDITTLSQLRKDAHPSTYSGEH-GRDCSHWCLPGLPDTWNELLYA 165
           LDIT LSQLRKDAHPS +SG H G DCSHWCLPGLPDTWN L Y+
Sbjct: 318 LDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYS 362

[Close]

BLAST of Cucsat.G2037.T4 vs. TAIR 10
Match: AT2G31110.2 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-67
Identity = 106/168 (63.10%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHT   QPWDY++ GN + KDM+RL A+Y+GL TWARW+  N+ PS+T
Sbjct: 196 MDVLIFNSWHWWTHTSGLQPWDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRT 255

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +V FQG+SP HY+G++WN+P +SCNG++ P  G  YP G P    +V +VLSR+RKPV L
Sbjct: 256 QVFFQGVSPVHYDGREWNEPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHL 315

Query: 121 LDITTLSQLRKDAHPSTYSG-EHGRDCSHWCLPGLPDTWNELLYAAFT 168
           LD+TTLS+ RKDAHPS Y+G     DCSHWCLPGLPDTWN LLY++ T
Sbjct: 316 LDLTTLSEYRKDAHPSLYNGISKDLDCSHWCLPGLPDTWNLLLYSSLT 363

[Close]

BLAST of Cucsat.G2037.T4 vs. TAIR 10
Match: AT2G31110.1 (Plant protein of unknown function (DUF828) )

HSP 1 Score: 253.4 bits (646), Expect = 1.2e-67
Identity = 106/168 (63.10%), Postives = 132/168 (78.57%), Query Frame = 0


Query: 1   MDVLIFNSWHWWTHTGRSQPWDYVQVGNTVKKDMDRLEAFYQGLTTWARWVEMNVDPSKT 60
           MDVLIFNSWHWWTHT   QPWDY++ GN + KDM+RL A+Y+GL TWARW+  N+ PS+T
Sbjct: 48  MDVLIFNSWHWWTHTSGLQPWDYMREGNQLYKDMNRLVAYYKGLNTWARWINNNIVPSRT 107

Query: 61  KVIFQGISPTHYEGKDWNQPKRSCNGESVPLSGSLYPAGTPPAAEIVKRVLSRMRKPVFL 120
           +V FQG+SP HY+G++WN+P +SCNG++ P  G  YP G P    +V +VLSR+RKPV L
Sbjct: 108 QVFFQGVSPVHYDGREWNEPLKSCNGQTQPFMGQRYPGGLPLGWVVVNKVLSRIRKPVHL 167

Query: 121 LDITTLSQLRKDAHPSTYSG-EHGRDCSHWCLPGLPDTWNELLYAAFT 168
           LD+TTLS+ RKDAHPS Y+G     DCSHWCLPGLPDTWN LLY++ T
Sbjct: 168 LDLTTLSEYRKDAHPSLYNGISKDLDCSHWCLPGLPDTWNLLLYSSLT 215

The following BLAST results are available for this feature:

BLAST of Cucsat.G2037.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VY22	9.2e-76	69.05	Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 ...	[more]
O22960	3.3e-73	68.64	Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 ...	[more]
Q9SIN2	1.2e-67	67.27	Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 ...	[more]
Q67XC4	1.7e-66	63.10	Protein trichome birefringence-like 40 OS=Arabidopsis thaliana OX=3702 GN=TBL40 ...	[more]
Q9ZV89	5.6e-57	54.22	Protein trichome birefringence-like 42 OS=Arabidopsis thaliana OX=3702 GN=TBL42 ...	[more]

BLAST of Cucsat.G2037.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647718.1	2.20e-128	100.00	hypothetical protein Csa_003453 [Cucumis sativus]	[more]
XP_004134666.1	1.09e-126	100.00	protein trichome birefringence-like 38 isoform X1 [Cucumis sativus]	[more]
XP_008439751.1	7.30e-125	97.62	PREDICTED: protein trichome birefringence-like 38 [Cucumis melo] >TYK13198.1 pro...	[more]
KAA0052629.1	9.54e-125	97.62	protein trichome birefringence-like 38 [Cucumis melo var. makuwa]	[more]
XP_038883707.1	8.46e-124	97.02	protein trichome birefringence-like 38 [Benincasa hispida]	[more]

BLAST of Cucsat.G2037.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLN5	5.29e-127	100.00	PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G519500 PE=3 ...	[more]
A0A5D3CPU7	3.53e-125	97.62	Protein trichome birefringence-like 38 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3B046	3.53e-125	97.62	protein trichome birefringence-like 38 OS=Cucumis melo OX=3656 GN=LOC103484456 P...	[more]
A0A5A7UGJ5	4.62e-125	97.62	Protein trichome birefringence-like 38 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1ECI9	1.78e-118	93.49	protein trichome birefringence-like 38 OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]

BLAST of Cucsat.G2037.T4 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29050.1	6.5e-77	69.05	TRICHOME BIREFRINGENCE-LIKE 38	[more]
AT2G34070.1	2.3e-74	68.64	TRICHOME BIREFRINGENCE-LIKE 37	[more]
AT2G42570.1	8.5e-69	67.27	TRICHOME BIREFRINGENCE-LIKE 39	[more]
AT2G31110.2	1.2e-67	63.10	Plant protein of unknown function (DUF828)	[more]
AT2G31110.1	1.2e-67	63.10	Plant protein of unknown function (DUF828)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 1..164 e-value: 8.6E-59 score: 199.6
None	No IPR available	PANTHER	PTHR32285:SF42	PROTEIN TRICHOME BIREFRINGENCE-LIKE 37	coord: 1..166
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	coord: 1..166

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G2037	Cucsat.G2037	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2037.T4.E1	Cucsat.G2037.T4.E1	exon
Cucsat.G2037.T4.E2	Cucsat.G2037.T4.E2	exon
Cucsat.G2037.T4.E3	Cucsat.G2037.T4.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2037.T4.C3	Cucsat.G2037.T4.C3	CDS
Cucsat.G2037.T4.C2	Cucsat.G2037.T4.C2	CDS
Cucsat.G2037.T4.C1	Cucsat.G2037.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2037.T4	Cucsat.G2037.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0016413	O-acetyltransferase activity