Cucsat.G2031.T5 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G2031.T5
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	rac-like GTP-binding protein RAC13
Location	ctg1002: 5718143 .. 5719366 (-)
RNA-Seq Expression	Cucsat.G2031.T5
Synteny	Cucsat.G2031.T5

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTATGGGACACTGCTGGTAATTCAATTAATCAAATAGTAAATACGGTTTTCTTTTTTGAAATTCTTCGGTATTTTTTAAGAACTTGGTTATGGAAATACAGGACAGGAAGATTACAACAGATTGAGGCCTCTGAGTTACAGAGGAGCTGATGTTTTTTTATTGGCATTTTCTCTTATAAGCAAAGCTAGTTATGAGAACATCTTCAAGAAGGTAATTTGAGTTCTTCCTGACGTATTATTAATATTATGTCGTGAATGTCACGGTAATGATTCTTGTTTTTGTTTTCTTTGCAGTGGCTTCCTGAACTTAAACATTATGCTCCAAATGTACCAATTGTTCTGGTTGGAACTAAGCTCGGTAATTAAAGAAGTGATCCTTTTTTTAAACTTCATGGCACTAAAAGACCAAAGTTCGAGTTTTATGAACAATTTTAACGAACTAAATTAAAAGATATTGAAATTGTTGTAGATCTACGAGAGGACAGAGAGTATTTGATTGATCATCCAGGAGCAACACCCATAACAGCAGCTCAGGTAATGAAATTAAACTAAAGAAAAGAGTTGATAAAAAAGGTAGATTCATGTATAGTGTTGGGTTGGGTTGGATTTAAGGTTTTTTATCTCTAGGGGGAGGAACTGAGGAAGATGATTGGGGCAATTACATACATAGAATGCAGCTCCAAAACCCAAAAGGTACAGCATTTTTCATTGGCAGTCTTTCCTCTCTCCACATCTATAAATACCATTGGTATATTAGAGAGTGATCTATTTAATTCTTCAGTTTAATATGGTATCAGTCACCTTTGAATAACATAATTTTTGAAAGTGTGGGTGGTGTTTTTTCTTTGGGTGCAGAATGTTAAAAATGTGTTTGATGCGGCAATAAAGGTAGCGTTGAGGCCTCCGAGACCAAAGAAAAAGGCTCGCAAGCAAAGGACAGCTTGCGCTCTACTTTGAAACTTCACAACTCATCTCTAATCACTTTTAATGGAAAAATTATTCCCTATGGTTAAATAATTTCTACACTGAAATCACACATATATTCAATGACCATATTCAATAATTTTTCTATTTCTTTATTATATATATATTCCCATTTGTAAGAATTGTGGAGGTATTTTCTCTCAATCTCAAAACTCTTCATGTGAGACAAACTTATTCGAAGGTTTTGTTTTGATTGAATTGTATTCTTTTTGTGGAGTTTAATACTTGTGCCTAAAC

Coding sequence (CDS)

GCTTATGGGACACTGCTGGAAGATTACAACAGATTGAGGCCTCTGAGTTACAGAGGAGCTGATGTTTTTTTATTGGCATTTTCTCTTATAAGCAAAGCTAGTTATGAGAACATCTTCAAGAAGTGGCTTCCTGAACTTAAACATTATGCTCCAAATGTACCAATTGTTCTGGTTGGAACTAAGCTCGATCTACGAGAGGACAGAGAGTATTTGATTGATCATCCAGGAGCAACACCCATAACAGCAGCTCAGGGGGAGGAACTGAGGAAGATGATTGGGGCAATTACATACATAGAATGCAGCTCCAAAACCCAAAAGAATGTTAAAAATGTGTTTGATGCGGCAATAAAGGTAGCGTTGAGGCCTCCGAGACCAAAGAAAAAGGCTCGCAAGCAAAGGACAGCTTGCGCTCTACTTTGA

Protein sequence

AYGTLLEDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLREDREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPKKKARKQRTACALL

Homology

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot
Match: Q41253 (Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.7e-59
Identity = 110/133 (82.71%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENI+KKW+PEL+HYA NVP+VLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIYKKWIPELRHYAHNVPVVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++LIDHPGATPI+ +QGEEL+KMIGA+TYIECSSKTQ+NVK VFDAAIKVALRPP+PK
Sbjct: 125 DKQFLIDHPGATPISTSQGEELKKMIGAVTYIECSSKTQQNVKAVFDAAIKVALRPPKPK 184

Query: 127 KKARKQRTACALL 140
           +K  K+RT CA L
Sbjct: 185 RKPCKRRT-CAFL 196

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot
Match: Q40220 (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.7e-57
Identity = 106/127 (83.46%), Postives = 117/127 (92.13%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSL+S+ASYENI KKW+PEL+HYAP VPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YLIDHPGATPIT AQGEEL+K IGA  Y+ECSSKTQ+NVK VFDAAIKV L+PP+PK
Sbjct: 125 DRQYLIDHPGATPITTAQGEELKKAIGAAVYLECSSKTQQNVKAVFDAAIKVVLQPPKPK 184

Query: 127 KKARKQR 134
           KK +K R
Sbjct: 185 KKRKKTR 191

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot
Match: Q6ZHA3 (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 6.0e-57
Identity = 105/133 (78.95%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYEN+ KKW+PELKHYAP VPI+LVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ +DHPGA PIT AQGEELRK IGA  YIECSSKTQ NVK VFDAAIKV L+PP+ K
Sbjct: 125 DKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQPPKAK 184

Query: 127 KKARKQRTACALL 140
           KK + QR AC++L
Sbjct: 185 KKKKAQRGACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot
Match: P92978 (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 7.9e-57
Identity = 105/133 (78.95%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEELRK IGA TYIECSSKTQ+NVK VFDAAI+V L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKSKAQKACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 7.9e-57
Identity = 105/133 (78.95%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEELRK+IGA  YIECSSKTQ+NVK VFDAAIKV L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQPPKTK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKSKAQKACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. NCBI nr
Match: XP_004134675.1 (rac-like GTP-binding protein RAC13 [Cucumis sativus] >KGN49273.1 hypothetical protein Csa_003219 [Cucumis sativus])

HSP 1 Score: 266 bits (681), Expect = 7.54e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRTACALL
Sbjct: 185 KKARKQRTACALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. NCBI nr
Match: XP_008439788.1 (PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo] >KAA0052649.1 rac-like GTP-binding protein RAC13 [Cucumis melo var. makuwa] >TYK13177.1 rac-like GTP-binding protein RAC13 [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (677), Expect = 3.07e-88
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. NCBI nr
Match: XP_038881426.1 (rac-like GTP-binding protein RAC13 [Benincasa hispida] >XP_038881427.1 rac-like GTP-binding protein RAC13 [Benincasa hispida])

HSP 1 Score: 260 bits (664), Expect = 2.93e-86
Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YLIDHPGATPIT AQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DRQYLIDHPGATPITPAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTNCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. NCBI nr
Match: XP_022926975.1 (rac-like GTP-binding protein RAC13 [Cucurbita moschata] >XP_023003127.1 rac-like GTP-binding protein RAC13 [Cucurbita maxima] >XP_023517161.1 rac-like GTP-binding protein RAC13 [Cucurbita pepo subsp. pepo] >KAG6594570.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026543.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257 bits (656), Expect = 4.85e-85
Identity = 124/133 (93.23%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKW+PELKHYAPNVPI+LVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YL+DHPGA+PIT AQGEELRKMIGA+TYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. NCBI nr
Match: XP_022142252.1 (rac-like GTP-binding protein RAC13 [Momordica charantia])

HSP 1 Score: 256 bits (654), Expect = 6.95e-84
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKW+PELKHYAPNVPIVLVGTKLDLRE
Sbjct: 124 EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIVLVGTKLDLRE 183

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YL+DHPGATPIT  QGEELRKMIGA+TYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 184 DRQYLMDHPGATPITTPQGEELRKMIGALTYIECSSKTQKNVKNVFDAAIKVALRPPRPK 243

Query: 127 KKARKQRTACALL 139
           KK RKQRT CALL
Sbjct: 244 KKTRKQRTTCALL 256

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL
Match: A0A0A0KI71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518280 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 3.65e-89
Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRTACALL
Sbjct: 185 KKARKQRTACALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL
Match: A0A5D3CMK5 (Rac-like GTP-binding protein RAC13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007890 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.48e-88
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL
Match: A0A1S3AZL0 (rac-like GTP-binding protein RAC13 OS=Cucumis melo OX=3656 GN=LOC103484479 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.48e-88
Identity = 132/133 (99.25%), Postives = 132/133 (99.25%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL
Match: A0A6J1KLK2 (rac-like GTP-binding protein RAC13 OS=Cucurbita maxima OX=3661 GN=LOC111496833 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 2.35e-85
Identity = 124/133 (93.23%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKW+PELKHYAPNVPI+LVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YL+DHPGA+PIT AQGEELRKMIGA+TYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL
Match: A0A6J1EMK3 (rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433930 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 2.35e-85
Identity = 124/133 (93.23%), Postives = 131/133 (98.50%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKW+PELKHYAPNVPI+LVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWIPELKHYAPNVPIILVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           DR+YL+DHPGA+PIT AQGEELRKMIGA+TYIECSSKTQKNVKNVFDAAIKVALRPPRPK
Sbjct: 125 DRQYLMDHPGASPITTAQGEELRKMIGAVTYIECSSKTQKNVKNVFDAAIKVALRPPRPK 184

Query: 127 KKARKQRTACALL 139
           KKARKQRT CALL
Sbjct: 185 KKARKQRTTCALL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-58
Identity = 105/133 (78.95%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEELRK IGA TYIECSSKTQ+NVK VFDAAI+V L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKSKAQKACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. TAIR 10
Match: AT3G51290.2 (Protein of unknown function (DUF630) ;Protein of unknown function (DUF632) )

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-58
Identity = 105/133 (78.95%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 666 EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 725

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEELRK IGA TYIECSSKTQ+NVK VFDAAI+V L+PP+ K
Sbjct: 726 DKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQPPKQK 785

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 786 KKKSKAQKACSIL 798

[Close]

BLAST of Cucsat.G2031.T5 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEEL+K+IGA  YIECSSKTQ+NVK VFDAAI+V L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQPPKQK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKSKAQKACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 )

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-57
Identity = 103/133 (77.44%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT AQGEEL+K+IGA  YIECSSKTQ+NVK VFDAAI+V L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQPPKQK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKSKAQKACSIL 197

[Close]

BLAST of Cucsat.G2031.T5 vs. TAIR 10
Match: AT4G35950.1 (RAC-like 6 )

HSP 1 Score: 216.9 bits (551), Expect = 1.1e-56
Identity = 101/133 (75.94%), Postives = 118/133 (88.72%), Query Frame = 0


Query: 7   EDYNRLRPLSYRGADVFLLAFSLISKASYENIFKKWLPELKHYAPNVPIVLVGTKLDLRE 66
           EDYNRLRPLSYRGADVF+LAFSLISKASYEN+ KKW+PELKHYAP VPIVLVGTKLDLR+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKLDLRD 124

Query: 67  DREYLIDHPGATPITAAQGEELRKMIGAITYIECSSKTQKNVKNVFDAAIKVALRPPRPK 126
           D+++ IDHPGA PIT  QGEEL+K+IGA  YIECSSK+Q+NVK VFDAAI+V L+PP+ K
Sbjct: 125 DKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQPPKQK 184

Query: 127 KKARKQRTACALL 140
           KK  K + AC++L
Sbjct: 185 KKKNKAQKACSIL 197

The following BLAST results are available for this feature:

BLAST of Cucsat.G2031.T5 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41253	1.7e-59	82.71	Rac-like GTP-binding protein RAC13 OS=Gossypium hirsutum OX=3635 GN=RAC13 PE=2 S...	[more]
Q40220	2.7e-57	83.46	Rac-like GTP-binding protein RAC2 OS=Lotus japonicus OX=34305 GN=RAC2 PE=2 SV=1	[more]
Q6ZHA3	6.0e-57	78.95	Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 ...	[more]
P92978	7.9e-57	78.95	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]
Q39435	7.9e-57	78.95	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]

BLAST of Cucsat.G2031.T5 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134675.1	7.54e-89	100.00	rac-like GTP-binding protein RAC13 [Cucumis sativus] >KGN49273.1 hypothetical pr...	[more]
XP_008439788.1	3.07e-88	99.25	PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo] >KAA0052649.1 rac-l...	[more]
XP_038881426.1	2.93e-86	96.99	rac-like GTP-binding protein RAC13 [Benincasa hispida] >XP_038881427.1 rac-like ...	[more]
XP_022926975.1	4.85e-85	93.23	rac-like GTP-binding protein RAC13 [Cucurbita moschata] >XP_023003127.1 rac-like...	[more]
XP_022142252.1	6.95e-84	93.98	rac-like GTP-binding protein RAC13 [Momordica charantia]	[more]

BLAST of Cucsat.G2031.T5 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI71	3.65e-89	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518280 PE=3 SV=1	[more]
A0A5D3CMK5	1.48e-88	99.25	Rac-like GTP-binding protein RAC13 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3AZL0	1.48e-88	99.25	rac-like GTP-binding protein RAC13 OS=Cucumis melo OX=3656 GN=LOC103484479 PE=3 ...	[more]
A0A6J1KLK2	2.35e-85	93.23	rac-like GTP-binding protein RAC13 OS=Cucurbita maxima OX=3661 GN=LOC111496833 P...	[more]
A0A6J1EMK3	2.35e-85	93.23	rac-like GTP-binding protein RAC13 OS=Cucurbita moschata OX=3662 GN=LOC111433930...	[more]

BLAST of Cucsat.G2031.T5 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51300.1	5.6e-58	78.95	RHO-related protein from plants 1	[more]
AT3G51290.2	5.6e-58	78.95	Protein of unknown function (DUF630) ;Protein of unknown function (DUF632)	[more]
AT2G17800.1	1.6e-57	77.44	Arabidopsis RAC-like 1	[more]
AT2G17800.2	1.6e-57	77.44	Arabidopsis RAC-like 1	[more]
AT4G35950.1	1.1e-56	75.94	RAC-like 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 97..119 score: 33.92 coord: 51..64 score: 55.07
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 7..122 e-value: 6.9E-4 score: -50.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 1..122 e-value: 5.4E-6 score: -34.9
None	No IPR available	PANTHER	PTHR24072:SF300	RAC-LIKE GTP-BINDING PROTEIN ARAC2	coord: 7..139
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..119 score: 13.983521
None	No IPR available	PROSITE	PS51419	RAB	coord: 1..139 score: 12.801283
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 1..122 e-value: 1.0E-39 score: 148.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 7..119 e-value: 1.7E-25 score: 89.5
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 1..139 score: 11.890295
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..139 e-value: 1.0E-40 score: 141.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..119
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..113 e-value: 1.9E-12 score: 45.2
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 7..139

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G2031	Cucsat.G2031	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2031.T5.E1	Cucsat.G2031.T5.E1	exon
Cucsat.G2031.T5.E2	Cucsat.G2031.T5.E2	exon
Cucsat.G2031.T5.E3	Cucsat.G2031.T5.E3	exon
Cucsat.G2031.T5.E4	Cucsat.G2031.T5.E4	exon
Cucsat.G2031.T5.E5	Cucsat.G2031.T5.E5	exon
Cucsat.G2031.T5.E6	Cucsat.G2031.T5.E6	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2031.T5.C6	Cucsat.G2031.T5.C6	CDS
Cucsat.G2031.T5.C5	Cucsat.G2031.T5.C5	CDS
Cucsat.G2031.T5.C4	Cucsat.G2031.T5.C4	CDS
Cucsat.G2031.T5.C3	Cucsat.G2031.T5.C3	CDS
Cucsat.G2031.T5.C2	Cucsat.G2031.T5.C2	CDS
Cucsat.G2031.T5.C1	Cucsat.G2031.T5.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2031.T5	Cucsat.G2031.T5-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0016020	membrane
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0042995	cell projection
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding
molecular_function	GO:0004767	sphingomyelin phosphodiesterase activity