Cucsat.G2018.T10 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G2018.T10
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein FRIGIDA-ESSENTIAL 1 isoform X1
Location	ctg1002: 5558324 .. 5570454 (-)
RNA-Seq Expression	Cucsat.G2018.T10
Synteny	Cucsat.G2018.T10

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGTTTGGGGATTATGTTTTCAAAGAATTTTAGGTGCCTTGGTTTCTCTTTTTTGGGCCTTGTGTGGACTTCAAAGGGATGTCTATTTTGGTTCAGCCGCATGTTATTTTTAGATTCTCGTGCTTTTACATTTGTGGAAATTACTTTTTCGAGGTTTTTTGGCCAACTAGTACTAGACTACTAGTATTGGTTCTAGTTGTCGGCTATTGTGGTTGTTTTTCAAGGTTTCTTCTCCATTAAGCTTTGACTTGATGGGATATGTTGGGTACTCCCACTTAGGTTTCTAAGTTTTGTGCGTATTTTTGAGTTGCATGAAAAGCCAAAAAAGTTGAAAAATCGCATAACTCAATTCAAATTGATATTGGTTTGGTTTTGGCTAGATGGGGTGGAATATATCATGAATGCATTGGAAACTTAAATGACAGTCCAAGCCCGCCCACTTTGTTCTTAAAGACCATTATAATCTATATATCTGGCAACCTAAAATCTAAAACAAAATAAATAAGACAACATAAAATGTAAAAGACAAAGTTAAGAAACCGAAGAATCAAATTTTAGAACCATCATGGATTGGCCTAGTTGTAAAAAAGGAGATATAGTCTCAATGCCTAACTAAGAGGTAAGGGATTCAATCCATGGTGGCAGGTACCTAGGAATTGATTTCCTACGAGTTTCCTTAATACCAAAATGTTGTAGGGTCAGACGGGTTGTCCTGTGAGATTAGTTTAGGTGCGCGTAAGCTGGCCTTGACATTTACGAATATATATATACACACGCATAGAAGAATCAAATTTTAGAATATCTTTTTCATCTCTTCAACTTCAAAAGCACACCTCTGTTTTTCTCTCTTTTCTTCTTCTTCTCTTTGTTTTTTCGATTTTCCAACTTTAACTTCCAACTTCATTTCATTTCCATTTCTATACTTCAACCCGCACTGACAATTTGCCACACCAACACCTTGCTTTTGACCATCTATTGCACCTCAGGCTTGCCATTGCTGATGGTTTGCCTTCTCTCTCTTTCTCCTTTGTTACCTCTCCAAATCTTCCAAAAATTTAACTTAGCATTTGGATTACAACAAATTAACTGAGCCATGGGCTGGGCACTAGCATCTTTTTTGTTGAATTAAATCCGTGGATAAATGTAATATGTATTTAGGCAATTTATGTTTTTTAGTGGATTATATTTAGTATCTTGAGGTATCTTGAACATATTCGTGTTTTAATTTTTTAGAAATTGCCGTACTTCCACCAAATCAGAATAAGTTCTACCTGGCTCTGATACCAATTTGTTAAGATACTTTTCAACAAGAACAAAATCTGAATTTATTAAAATGTAACTATAAGAAAATACAAGATAAACTTAAGTATAAGGCTGTAGGAATCCCTCTTGAGTACTGTCACCCAAACCCTAGATCACTCCATCGAATCCCTCCCTCTCACTTACCGATCCCTTCATTTATAACAAGATGTAACCACCCTAGTAACAACACTTACATAATAACTACTAGTAACCACACTTACATAATAGCTAATAGTAACTTCCTAAATATCTAATTATCCTTATACTCCTAACCCTATACTAATCTAGTTATCTAACAATATCCTATCCTATCGTTTATGTATCTCGTATCCGTATCTGTGCCTCATCGCTTGTCGTCTTAGAGTGCACCTTGTTGAAAACACTGGGTGGGTATGAGTTTGAACCTGAATGAGCGTGAGATATTTCTGCTTGTACTCATGGATGGACATGAGAGCTAAGCATGCCCATCACTAGTGTAACCCAAGCCTAACAACCAAGCGCCTAATATTTCATTGGGTTCTAGGCGTAAAAAATGCATGTGGAATTAAATGTGAATGAAAATGACCCGACTAAATTGAGAAAACTATTGGCTAATCAGTTTGGTAGGCTGGCTCGAGTTTCCTATTTTCTTTATATTTCTAGTGGTTCCTTTTGGGTTTGGCTCCCAAACCGAGCCGATATGAATCATTTACACCGCTAGTGTATTTAACAAAATAAGGAAGCCTCACATTGAGTTCTATATGGCATGTTATGAGAATGATTATGAATACAACTAGAAGATAGATGAAGCAATGACTTCCGGTTGAAATTTCAAGAACACCATTTCTATATAGCTAGTTTTGAATTCTGTTTGGTTAGTTTTCTCAAGTGTGTAGTCACTCGATCTTCTTTCTACCGAATGCTGGTTCTTTTGTCCCGTCGATACTACATATAAAAATCTTCTTTTCTCACATAGGTGACCTTTTTTTCCTCAATGTGTACCTTGTAGATGCTTGCAATGATATGGACACCAAGAGGCATGACAAGCACTTGAGATCGGAAACCGTTACTGCCACTGAAAATTCTGAAGTGAATAAATTGTCCTTTGTAGGAGAAACTGAAAATAGTGGCAATATTGAATTTTCCAGTCCGTCAGGTAAGCCATTGGAAAAAAAGGAGGAACAATCACATGGAGAGAGCACAAAATTCGAATCACAGAAGTGCCTGAAGGATAAGGGGACAGAAGATCAAGAACCTACTGTTGGTGATAAGGATGTAGAGGCTTTGAGAAATAAAGATTTTGGTGGCTCAAGTTATAACAAGGTTCCATTGTGCAATAGTGAAGTTATGGTTGCTACAGCTACCAATGGATCAAGTGACACCTTAGAGGATTCTGACATTGGATCAAAAAATCACTCGGCTGGACGGATTATTGGTACCAAGAATCCTGAGAGAGAAAGTGAGCAAATGGGCATGCAACTAGATAATGGAGAAAATCAAATGGCATCAAGGTACTGATGAGGGTGGTTCTAAAACTTCCTTTGTTACTTGTCAAAGTTCCATATTAACATTTCTGATAAAAAGAAAAGGCCACCATACAATCATCTTTTGCAGCTAATGCATAGTGGTTATTTTCTTACCTTGTCAAGTGTCAAGGATAGTTCTTGATTAGCTCTTCCTAACAATTAGAATTTCCAGATCAACTGCTTCAAAAAAGAGGTCAAGAAGTTTGACCCCCGTTGCTGATGTTAATGGTGAAGAAAAACATCCTGCTGCAGCTATCTGTGACTTCTATGCTAAAGGATGGTGCATAAAAGGTAGCTCTTGCAGCTTTTTGCATATAAAAAATAATGCATACGGTAGTGACCAGCATTCTGAGGAACGTGCTGGTGCTGCATGTTTGAAAAAACAAGCTCAGCTCAATGAAGGTGAGATCAAGTAGCTTATGCAGATTCCGATATTCCTTTTCTATCATCAAATTCTAATAGTACTTTCAAATGGCACAGGTTTGCAATACAATGCAGATGTGTTGAAATCACCAGTTATTCGTCATCCACCGAATTCTTCTCTTCTAAAGGACTCTTCACTTTCTTTGAAATTTGGAATTTCTTCAGAAAGAACTTTACCGAGGGACTTCTCCCAAAGCCAAGGATGGGATGGGTTGCATGAGAAAAACAAAATTTTATTGCATCAGAGGGAGGATTCACTTTTGAGTGCACTTCCCGACTGCCAGAAATTGCCTTCTACTAGTTTTGGTGCATCATTTCCCCTTAGTAGAGGGCTTTCTGCATCAAGGCTTGAGTTGCCTCCTGAGTTTGGAGTCTCTTCAGATGGCTTCACCCCATTGGGTGTCATGGAGGAACCCACTAATGTTGCATGCCCACGTTTGCTGAACGATCACCTTTCTCCAGTTCTGAGAACTTCTCTGAATTCAAATCCTACTCTTCCAAGGGATGCTATTTTATCTTCTCGTTTCACTACCTCTAATGCTTCTTTGTTTCCTCTTACGTCTTCCTCAAGTGCAAGCCTCCTCAATGCTCATAAGATGTCCATTATTGACAGAGAACATCATGTTTCTACACCGGCCTCCTCGTTGATGAGAAGTTCCCCCTTTTCTGCTTCTGGATCAGATAATTCATTCACTCACGTGTCAAAGAATCCTTCAGAATACAAAATGAAATGTTCGTCGGACGATTGGGAACCGTCTGTACCTTTTAGACCATCATTTTTCATTCCTTCAATAACTACGGCGAGCCAATACGACCCTTTCTTGGATAGCATGGAGGTACCGAGAATAGTGGGTTGTTCTTATAATGTTACTCTTGATCGTCAAGGACACGAAGAAGCATCACCTCTTAGTACTTTACAGAGGGCATCGGGTAATTTTGTGGTTCCTGGGAGCTCAAAGCCAGAATTTAATGATGATACAAGTTCTTTATCCTCCCACAATAAAGCTGCAGATAAGAATGGAAAGGTTGGCCATCTGCAAGGCAAAGATCCACTTTTGTTAGAACCAGAAATACGTGGATCTTTTGGTCTTGATGGCCGCTTTTCTAGGACTAGAGAGGATGATCACAAGGGTCTCACTTGTGAAAAAGATGTTACCAAAAAGAAGAAAATGGGTATCGGTGGTGAACTAAAGCTTCCAAATATTTCATTACATGAAAAGGACTCTGAAGCAGATAGTGATAGGCAACTTGGTGATATGGATGGTAAGCATCTCATGGAGGGAAATGCTCCCAAAGAATCAAAAGCAACTAGGCACTTCCGTTCTGCTCTCATAGAATTGGTGAAAGAAATATTGAAACCTAAGTGGCGTGAGGGTCATCTCAAAAAGGATGTGCATAACACAGTTGTTAAGAAAACATTTGATAAGGTTCTTGGTGCTCTACAATCTCACCAAGTTCCAACTACTGTGGAATCAGTTAAGCAGTATCTTTCTTCATCTCGTCCAAAGATCGAGAAGCTAGTCGAGGTAGGTATCTTTGTTAGAAAGATGAGTATACTCTGATGATGTTGATCTTGGGATCTTCATAGAATCTTTGTCTTACTGACAATGATCAACATTTATATGCAGGGATATGTTAGTAAATATGGAAAATCTTGAGATGGCAGGATAGCACATTTTTTCTTTGGGTAAGTTTTCTAAGGATTCTACAATTTAGAAGCCTTGAAGAGTTTGTCGAAGGTTGTTTTACAATCTTGATTATTGGAAACAACTTGAAACTAGTTGTGATGGTCGTTATTCAATGCATTGTGATATTTACCTTTCATAAACATCTGTTCTCCCCTCATTTTGTTCTGTTTAATTTTTCTTGCTAGTTCTATCAGAAAAGAACTATTTATCGCCATATAACCTGTATATCTGCTCTTGATTGTAAATAATAAGGCTCATCCTTCATTTATTCATGTGAATGATAGTAATGACATAAACCTAGAAATAAAAAAAATGCTAAATTTATAGTTAAATAACACTTTCAACTTGATTTATTCTTGCTTTCTGTCTCACTGATCATTCTGGTATTATTTTCATGTAGCAGTGGGGAATGGTGTAGTCATAGTTTAGATTTACGCATTTGTGCAATCTGAGCTTAACAACTATAGATCAAATTTGCAGTTTGGGCTTGTACTGGTGTCTTTTATTCTGATTGGTGCAACATTTTGTGAGCTTCTTCTGTTTTGGAAAAGCTAATACCATACATTCCCATGTCTGTATCTGTCTTTGCTGGTTAATGAATTCTCTTGTTTTCGGTTGAAAGATAAAAGACGAGTTTTTGTTATTAGCTGCAGTGCTTCTGAGCCAGTTTTTAGAAGGTAAGCAAAGTTTTCTTATATCATTAGTTGCCGTATCTAATTTCTGATATGTTGTTCTTATTGATGTATGGACTTGTTGAAATTTTGAGATACATTTATTCTAGAGAAATTTGGTAGGAACCAAAACACAATCAACTATATTGGAATGTAAATGACAAAAACTTAAATGCGAGGAACTGGGACCCTCCCCAAGCCCTAAGTCACCAAAAGTATTACCTTGCTTCTCTTTTTTCTCTCTCTTTTTAGGTATAACCAATTATGGTAACGACCTCTCTAACTAGTTACTAATATACTGTTAATATCCTAATATCACCCGAATTCCATTCCTGTGAAAACTAATTGTTGTGTTATTTATTTATTTCGAGTCCCTCAACTGTGCCTATCTTATTGTTAACTTTAATTTTTATAATAGAATCTTGATTTATTGTGAAACATACACACAGGCTTTAGACCTGTATACACATATTTTGAAGAAAAAAGAACGACTTTCATGGAAAGAATGCAGAGTCAGGGGGAGCCGATTCAAAAGGAGCAGGAAAAGAGTCACAAAAAGGGCTTAAGTTCAAACTAATAAAAGAAAAGATAATCACAAGTCCTTAGTCATGGATTACCAAAGGGACACCTTGAACGTGGCTAAAGCCCAAGTCTCCCCAACGACTGTCCTTATTACTAAAGACTCCTATTCTTCTCAAGCTAAAGGTTTCATATAGCTGCAAACAAGCCTGCCTGCCATAAAAATGCCCCTCTATCACTAGGGGGGAGGGGAGATGTAATAACATCTCCATCACCATCATTGCCATGTACAATCTGCTGGGAGCCATCTTAAGAAGACTCCAGGAATTTAATTCCAATATCATGGTTCAGACTTTTCGTAACCTCCAGTATCTGTCAAATTTTAGATAGAAGTGATACGTTCTTGCATTTAAGGTTTTCGATACTGAGACCAACTTTTCCACAAAGAAAGACTAAAATTTCTATTTCATCACATGATGAGGCTTACCAGCCAAACTTGACTCTTCACAGAGGAAGCCCATTACCATCTTCCAAGTTCACCATCCACACCTTCTTTTAAAAGAAAGGCATGGTTCCAGATATCTGGCTTACACTTTGAGGAGGCTTCTGGTCTAAATTTAAATCGTTCCAAATCTTAGATTTTGGGAATTTAACTCTACACTTGAGGGAATTGGACTGGTTGCAAGGTGGGCTACTGGCATGACATATATCTTGGCTTGCCTTGGGCGCGATCGTTATCATGTTGGATTTCTATTGATGACAAAGTTGACAGAAGATTACAGTCTTGGAATCATTCACACATTTCCAAGGGCAGTGGTTTTACCCTTCTACAAGGAACTTTATCAATCCTCCTCCACCTATTACTTATCCCTATATAAGATCCCACTCAAGGTCATTATTCTCATTGGAAAATCTTACAGAAACTTTTTTGTGGAAAGGGGGCACTTCATATTCTGGGATGCATCTTACTAGATGAGACAAAATTGTTAAGCCTCTTTCACATGGAAGCCATAGCATACAAGGCTTGGGTGACAAGAACCACCAGGCTCTCCTTACTAAGTGGATTTAGAGATATTATCAAGAAGAATAGGCATTATGGAGAGAATACAATTGAGAAACAACTTAGACCCTGGGATTCCAATTGGGAGGAAGTAAATCACTTGATACGTACCTAAAACTCTCAACCCCACTCTAATCTTTTCTAGGAATGTTCAGAAGACTGATGACCCGACAAAACCTCAGCCCAACCTAGCCCATTCTCTTCTTTAATGCAATTAATATAAGCTGCGGTTGACATCTATAGCTCAAGTTAGGTAATGGAAAAATGCCATTGGTGAATTCAAAAGCCATTCCTATCAACCACGAAACCTTCGTCAAAATCAGATTGAGAAGCTTGTTTGAGCAGTCAACAAATGCAATTTACCAAAAACCCAAATAAGTGGAAAGGATCACATTGATGAAGGGACGTTGCTTCTAATCCACATTTCTATCTAGAGTGAAAGCTCTTAGACTCCAGAACTGCTTAAGGAAATCCCAACAAAGCCTCTCATTAGATCTAGCTTAGATATCATTCCTTTCTTTTTTCTTGTCTTCCAATCTTGAGGAGCAATAATTTATCTCTGACCATTTAATTGCCAGAATGTATACTTTGGCTTTGACCAACAAAGGCAGCTGAGCAAAGAGATATTGTACCAGGCAAACAAGGCTTCACTCAGCCAGCCTTTACATTAGAAACTTAGCCTCAATCTTCTACCTGCAATTGGTATCCTCTAGTTTTGTTTTTTTGCTAGTGTTACTACTCTAGCAATTGCATATGTTTAGGAGATGAATATGATGGTAGAAAGTTTTTGTTTTTTCTTCAATCTGTGTGGTTTGGAAAGTACTGTGGAAATGGGGCAGTTTTTGCAGAAGTGCTGATCACAGTAAACACTGAAGAGTCTAAAGTTTATTGAAGGAATGTTTACCCAAGTTAGATTGATTGATCGATTGATTTGGTAGATGAATTCTAGTCCCCAACCTAAGTTAGTGAAATAATACACGGTATGAAGGTAGACCGGATTAGTGAAGCTTATCGAGGGATAATATATATCGGTTGTCACTTTACCTATTAGAAGTGGATGTCTTAGAAAATTTTTGTTCTTTTGGGATTTTAAGCTTGTAGTCTTCAAGTATCTTAAACATTATACGTTCCATTAGCTGTTCAACTATCTCCTTGAATTCTCCTATATCCCACTTTTCAGGATTGTTTTTGCATTAGGCTGAGATTTTTGCTATTTTGAATGGTGGTATATAGCGGACCTCAGTTGCTAGACCTTTCTTCCTTTGTTGGTACAATCTTTCCTTACTTGATTGGAGTTTAATTCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAAATTGTAAGGAAATGATGGCTATAAGGTCTTGTGACAATCCCGTCGGTGTCCTATATTTTTGTCTATACCCATGACATCTTTCATGGGAAGGAGAAACGACTGGAAATATTGCAAATTGCAAACCAAAAAAACAAAAAAAGGAACTTGAACGAAGATGCCAACTAGATTTCTTATAACTTCTCCAATTTATGTTATAATCAATGCAAATCATTATGTACCATTATTCACAGTATTGTTGGCCCTCTAGCCCTTCCATCGAAAAAGAATGGTATTAGATTTAGGTGACTGAACTTAAATAATTTAACTATTAGATTAGACATGTCATATATATTAGCTATCAACATTGCTCTTACTGGCAAAAATGCTGTAAGGATAAGGTAAAGAGAGCTTAGAGCATCGAATCAAGGAGTTAACTCATGCCTTTTGGGTTTGACTTTTGTCGCATGTTTCTCTTTTTGTTTGCTTTACGACATACCTCTTTGGCAGGGCACATCACAAAGGATTAGTTTGTTCCCAGTTCACAGTTCTATACACTGTGATTTGGTTTCTGTATAAACTTTATCTCCCAACCTTGTCTGCTTCAAGCTTAACTGATACAAGTGCTTCAAAGAATTCGAGGCAACTGTTTGTCAGTCATTAGTATGTAACTTAGTGTCGGTTCGAAATGAACAAAGTACTTAAAAAGGTCTAATACTCCTTTGTGTTATTTGTTTATTGCTTAGTTGAGATGCGATGGAAAACCTAAATGGTAGATTGATTCCATTATTCACATTTATTAACTACTTTGAAGTCTGATCTGACTACACCAAGTAAAAACTCACTCCCATAAATCATGGCGTGCTTTGTGAGCCTCAGTGTGACATATAATATAACCTAACATTTTTAAAAATATATTTTTTCAAGGCAAGAAGATAAAACCTTTCTATTCCTAACGTGGCATTTGCTTATTGGAGAGTGGATATGGCAATACATCCAGAGTTTTGTAATGGAGAAATAAACATCCATCTCCCTTAATTGGATTAATGGATTTGGATGATGAAATTCATCAACCGCATTATATTTTCCCTAAACCTTGAAAAAAAAAAAAGGAAAAATGATTAAATTAAGATTCCACCAAAGCGAAGTCCAGATTCTTGGAGTGGCATCTTATTCTGAAGATGGGATATTAAATTTCATTTACATCCATTTGACAAGTTGGAAACAAAATCTGAGCCGTTAATAAGTGAAGAACCAAGTGAAGATATCCACGTGTGAGCTCTCAATTTGAGTTGAATCATCTGACCTTTTGCACTCAGAAATGGGACAATATGTGTGTATATATATCTCTCTCTCTATTATTAAAGTAGGAGACAGTAATCCACATGTAAAGCAACCCATAACCTGCTCTGTATCTCTCAACAGATATTTTCCCTTTTGTCACCATGTTTACGTTTACTCACTCTTCATCCTTATCCATTTCATATATATTTTATATTTTCTCTTTTTATATTTCCATCCTATCATTCACCTTTTAATTTTACTGCACCAGTTCCTCATATTTTTTCTGTAACAAATTTCAAATTTTAAATGTTTCAACAGAAACTTTTAAAAGTACATTAACATAATCCATTTTTTGTATGTGTGATGATAGTTTATTTTTCTATTCATACCAATTTCTCCTAAAATTTCTTTTAAAAATATTATAATTAATTAACTCTTCCAAAAGAAATTTGTGAAAAAAATATATGTTATATCACTTTGACTTGAATGTTTATTGTGTGACAAAATAACTTGACTGTTTATTCAAGCATCTCTCTTCCCTTATCTATGATTTAGTCATGCAAGCAAACGATAAGATCAAACACTTTAATATAAGTAACTGATACGATTGACAAAATTTATAAAAAATTTATGGATAATTCTAAAAGTTCAAATATTAAACTTAGAATTTAGATATTTCAAATATTAACTTAAAAAATAAAATAAAATACACTGTAATTAAGTGATTTATTAAACATACTTCGCGTCGAAGTTTGAAAATAAAATAATTAAAGACTGTAGCCCACAATGCCAATATACTATGTGATCATGGCTCGATAGTAATAAGTACATTAAAAAGGAAAAAAAAAAAGAATTAACCAACTCAAGAAGCTAAGTTAACCTTGGTTAATTGACCCCCCCTTTCTTACCTGTTGTTTAGTTAAGAGTGGATTGAAAAAAACATAGGTGCATAAATATTGGTAAAAAAAGATATTGGGGCTAAGGTCTATTTATAAAAGCATACACAAGATCACTACAGAATTGGGGTTCTAAACGAAGGTTGGAACTTGGAAGTGAAAAAGTTGATAAGCAATGGTTCTGCTTGAGACACTTTGGGATGATGTTGCGGCTGGACCTCAGCCTACCCGTGGCCTCGGCAAGCTCAGAAAACTCAGTACTAAGCCTTTGGTCGTTAAGGGTAATTCATTCATAATCTTCTTTTCATTCTGATAGTTAGTTTTGTTGATCATTTTGATACAAATTCCTTGTTGGTTTTAGATTTGGAAGGAGATGGAAGCAAATACCAAAGATCCACGTCTATGCCAGCCAGTCCGGCAACACCCACCACTCCGGTCACACCTGTCACGCCGTTAACAGCGGCGCGTAAGGATAATGTTTGGAGAAGCGTCTTCAACCCTGGTAGAAACTTTGCTACCAAGACTATTGGTGCTCAAGTCTTCGACAAACCTCAACCCAATTCTCCAACTGTTTATGACTGGTACGTACATCAACTTTTCACTGGGGCGACTGTAATCCACGCGCCGCCGAGTGGAATATAATTATGGTGATGGTGAAGTAAAATTAGATTCTGGGGTATCTTGTCCTTAATATTCCCAACAGTTGGTGGATGATAAAAAAAACGATTCGAAGTTCTGATTCCCCCGAGTGAAATCCAAAGCCGTCAGATCTGTTGACTTGGTCATGGTTCTGACATCTGAGGGCTTGGATGAGTCCTCTATTTTTGTCGTATATCAAACTGACATGAAACTCTTTGTTTTGCGGTTTCAGGCTCTACAGCGGTGACACCAAGAGCCAGCACCGTTAAGCGGTGGCTACGACGGCGGTTGAATGTAAATAGTGTCGTGTGTGGTGACGTGAGCCGGTGGGTTCTGGATGTGTATGTGAGATACATCTTCTAACTAGGTTTCTTCGCATCCGAGTTGTCCCAAGCAAGTTTTTATAATTGTAGTGTTAAATTTGTGTGAGTCTATAGTTAAGTAGGGGTTAAGTGTGCTGACACAGCCAATGATGGGACGACTACTTCATATAGTCCGCCGTGCAGGGCGGTGATAAAATTGGCTCATGATTGCCGTTTAAATAAAGATGGTGTTTTTTCTGTCATTGAATAAGTTGATATTTTATGATGCTGATAGCGCATTAAATTGTGATAATATCCAATCTTGATTACATAGATGGCGTGTAATTGTATTGAAATGTTAGTAATGGAATGGACCCACCAAGCTTTAAAAACCTCTACGGTGGGGGCCTACTTATTTCCACCTTGGCCCCACAAATGTATTAAAAGTTTGGGAAAATCCAAAAGGAATAATAACAAACAACAATACAAGCGGTTTATGGATAAGGATAGAGTCGTAATCAATGAGCT

Coding sequence (CDS)

ATGGTTCTGCTTGAGACACTTTGGGATGATGTTGCGGCTGGACCTCAGCCTACCCGTGGCCTCGGCAAGCTCAGAAAACTCAGTACTAAGCCTTTGGTCGTTAAGGATTTGGAAGGAGATGGAAGCAAATACCAAAGATCCACGTCTATGCCAGCCAGTCCGGCAACACCCACCACTCCGGTCACACCTGTCACGCCGTTAACAGCGGCGCGTAAGGATAATGTTTGGAGAAGCGTCTTCAACCCTGGTAGAAACTTTGCTACCAAGACTATTGGTGCTCAAGTCTTCGACAAACCTCAACCCAATTCTCCAACTGTTTATGACTGGCTCTACAGCGGTGACACCAAGAGCCAGCACCGTTAA

Protein sequence

MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR

Homology

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BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot
Match: O22611 (Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-37
Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = 0


Query: 3   LLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVT 62
           +L+ LWDD+ AGPQP RGL KLRKL+T    +KD +G  ++  RSTS+   P TPTTPVT
Sbjct: 1   MLDKLWDDIVAGPQPERGLEKLRKLTT---TLKD-DGASNQLMRSTSI---PTTPTTPVT 60

Query: 63  PVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 121
           P TP +A + DNVWRSVFNPG N ATK+IGA VFDKP PN+PTVYDW+YSGDT+S+HR
Sbjct: 61  PTTPSSARKVDNVWRSVFNPGSNSATKSIGAHVFDKPLPNTPTVYDWMYSGDTRSKHR 111

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BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot
Match: Q05349 (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 7.8e-37
Identity = 77/119 (64.71%), Postives = 93/119 (78.15%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLL+ LWDD+ AGPQP RGLG LRK+  +PL +KD EG+ SK          P TPTTP
Sbjct: 1   MVLLDKLWDDIVAGPQPERGLGMLRKV-PQPLNLKD-EGESSKI-------TMPTTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQH 120
           VTP TP+ +ARKDNVWRSVF+PG N ++KT+G QVFD PQPNSPTVYDW+YSG+T+S+H
Sbjct: 61  VTPTTPI-SARKDNVWRSVFHPGSNLSSKTMGNQVFDSPQPNSPTVYDWMYSGETRSKH 109

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BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot
Match: B9DGG8 (Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-33
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

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BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot
Match: P93017 (Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-28
Identity = 63/116 (54.31%), Postives = 84/116 (72.41%), Query Frame = 0


Query: 7   LWDDVAAGPQPTRGLGKLR-KLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTPVTPVT 66
           +WD+  AGP+P  GLG+LR K++T+PL +K + G+GS  +   ++  SP TPTTP     
Sbjct: 1   MWDETVAGPKPEHGLGRLRNKITTQPLDIKGV-GEGSSSKTVAAVAGSPGTPTTP----- 60

Query: 67  PLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGDTKSQHR 121
              +ARK+NVWRSVF+PG N AT+ +G  +FDKP  PNSPTVYDWLYS DT+S+HR
Sbjct: 61  --GSARKENVWRSVFHPGSNIATRGMGTNLFDKPSHPNSPTVYDWLYSDDTRSKHR 108

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BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot
Match: Q9FKV8 (Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DRMH2 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 65/122 (53.28%), Postives = 80/122 (65.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQP-TRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTT 60
           M +LE LWDDV AGP+P   G G LR++ST  L   +   +G     S S+PASPATP T
Sbjct: 1   MGVLENLWDDVVAGPRPEAGGRGHLRRISTS-LTSLNNTTEGMSVAGSVSLPASPATPVT 60

Query: 61  PVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGDTKSQ 120
           P        + RK +VWRSVF+P  N  T+ IGA VFDKP  PNSPTVYDW+YS +T+S+
Sbjct: 61  P-------GSGRKVDVWRSVFHPASNVTTREIGANVFDKPSHPNSPTVYDWMYSNETRSK 114

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BLAST of Cucsat.G2018.T10 vs. NCBI nr
Match: XP_004134697.1 (dormancy-associated protein 1 [Cucumis sativus] >KGN49243.1 hypothetical protein Csa_004438 [Cucumis sativus])

HSP 1 Score: 248 bits (633), Expect = 5.33e-83
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. NCBI nr
Match: XP_008439831.1 (PREDICTED: dormancy-associated protein 1-like [Cucumis melo] >KAA0052673.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa] >TYK13151.1 dormancy-associated protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 4.75e-77
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. NCBI nr
Match: XP_038881719.1 (dormancy-associated protein 1-like [Benincasa hispida])

HSP 1 Score: 229 bits (584), Expect = 1.59e-75
Identity = 108/120 (90.00%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPLV+KDLEG+GSKYQRS S+PASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKISTKPLVLKDLEGEGSKYQRSMSLPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TP TAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPFTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. NCBI nr
Match: BAI52956.1 (auxin-repressed protein [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 227 bits (579), Expect = 9.22e-75
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. NCBI nr
Match: XP_022925661.1 (auxin-repressed 12.5 kDa protein-like [Cucurbita moschata] >XP_023543678.1 auxin-repressed 12.5 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 201 bits (512), Expect = 1.43e-64
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDD+ AGP+P RGLGKLRK++  P +VKDL+G+GSK   S SMP SPATPTTP
Sbjct: 1   MVLLEKLWDDIVAGPRPDRGLGKLRKITINPPIVKDLDGEGSKG--SLSMPNSPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRN ATKTIGA+VFDKPQPNSPTVYDWLYSG+T+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNLATKTIGAEVFDKPQPNSPTVYDWLYSGETRSKHR 118

[Close]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL
Match: A0A0A0KI43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518000 PE=3 SV=1)

HSP 1 Score: 248 bits (633), Expect = 2.58e-83
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP
Sbjct: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL
Match: A0A5D3CMW2 (Dormancy-associated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007620 PE=3 SV=1)

HSP 1 Score: 233 bits (594), Expect = 2.30e-77
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL
Match: A0A1S3B0B2 (dormancy-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484508 PE=3 SV=1)

HSP 1 Score: 233 bits (594), Expect = 2.30e-77
Identity = 110/120 (91.67%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK+STKPL+VKDLEGDGSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPVRGLGKLRKVSTKPLIVKDLEGDGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATKTIGA+VFDKPQPNSPTVYDWLYSGDTKS+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKTIGAEVFDKPQPNSPTVYDWLYSGDTKSEHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL
Match: D1MWZ6 (Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitAuR PE=2 SV=1)

HSP 1 Score: 227 bits (579), Expect = 4.47e-75
Identity = 106/120 (88.33%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDDV AGPQP RGLGKLRK++TKP ++KDLEG+GSKYQRS SMPASP TPTTP
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGKLRKITTKPFILKDLEGEGSKYQRSMSMPASPGTPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRNFATK+IGA+VFDKPQPNSPTVYDWLYSGDTKSQHR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNFATKSIGAEVFDKPQPNSPTVYDWLYSGDTKSQHR 120

[Close]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL
Match: A0A6J1INZ7 (auxin-repressed 12.5 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478641 PE=3 SV=1)

HSP 1 Score: 201 bits (512), Expect = 6.91e-65
Identity = 96/120 (80.00%), Postives = 107/120 (89.17%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDLEGDGSKYQRSTSMPASPATPTTP 60
           MVLLE LWDD+ AGP+P RGLGKLRK++  P +VKDL+G+GSK   S SMP SPATPTTP
Sbjct: 1   MVLLEKLWDDIVAGPRPDRGLGKLRKITINPPIVKDLDGEGSKG--SMSMPNSPATPTTP 60

Query: 61  VTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKPQPNSPTVYDWLYSGDTKSQHR 120
           VTP TPLTAARKDNVWRSVFNPGRN ATKTIGA+VFDKPQPNSPTVYDWLYSG+T+S+HR
Sbjct: 61  VTPTTPLTAARKDNVWRSVFNPGRNLATKTIGAEVFDKPQPNSPTVYDWLYSGETRSKHR 118

[Close]

BLAST of Cucsat.G2018.T10 vs. TAIR 10
Match: AT1G28330.1 (dormancy-associated protein-like 1 )

HSP 1 Score: 166.0 bits (419), Expect = 1.8e-41
Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYDWLYSGD
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGD 120

[Close]

BLAST of Cucsat.G2018.T10 vs. TAIR 10
Match: AT1G28330.4 (dormancy-associated protein-like 1 )

HSP 1 Score: 164.5 bits (415), Expect = 5.4e-41
Identity = 83/126 (65.87%), Postives = 99/126 (78.57%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYDWLYSGD
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDWLYSGD 120

[Close]

BLAST of Cucsat.G2018.T10 vs. TAIR 10
Match: AT1G28330.3 (dormancy-associated protein-like 1 )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

[Close]

BLAST of Cucsat.G2018.T10 vs. TAIR 10
Match: AT1G28330.2 (dormancy-associated protein-like 1 )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

[Close]

BLAST of Cucsat.G2018.T10 vs. TAIR 10
Match: AT1G28330.5 (dormancy-associated protein-like 1 )

HSP 1 Score: 143.3 bits (360), Expect = 1.3e-34
Identity = 75/125 (60.00%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MVLLETLWDDVAAGPQPTRGLGKLRKLSTKPLVVKDL-EGDGSK--YQRSTSMPA--SPA 60
           MVLLE LWDDV AGPQP RGLG+LRK++T+P+ ++D+ EG  SK    RS +MPA  SP 
Sbjct: 1   MVLLEKLWDDVVAGPQPDRGLGRLRKITTQPINIRDIGEGSSSKVVMHRSLTMPAAVSPG 60

Query: 61  TPTTPVTPVTPLTAARKDNVWRSVFNPGRNFATKTIGAQVFDKP-QPNSPTVYDWLYSGD 120
           TPTTP TP TP    RKDNVWRSVFNPG N AT+ IG+ +FDKP  PNSP+VYD + +  
Sbjct: 61  TPTTPTTPTTP----RKDNVWRSVFNPGSNLATRAIGSNIFDKPTHPNSPSVYDCVDNEA 120

The following BLAST results are available for this feature:

BLAST of Cucsat.G2018.T10 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22611	1.2e-37	65.25	Dormancy-associated protein 1 OS=Pisum sativum OX=3888 GN=DRM1 PE=2 SV=1	[more]
Q05349	7.8e-37	64.71	Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1	[more]
B9DGG8	1.8e-33	60.00	Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1	[more]
P93017	1.3e-28	54.31	Dormancy-associated protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DRMH1 P...	[more]
Q9FKV8	2.1e-26	53.28	Dormancy-associated protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=DRMH2 P...	[more]

BLAST of Cucsat.G2018.T10 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134697.1	5.33e-83	100.00	dormancy-associated protein 1 [Cucumis sativus] >KGN49243.1 hypothetical protein...	[more]
XP_008439831.1	4.75e-77	91.67	PREDICTED: dormancy-associated protein 1-like [Cucumis melo] >KAA0052673.1 dorma...	[more]
XP_038881719.1	1.59e-75	90.00	dormancy-associated protein 1-like [Benincasa hispida]	[more]
BAI52956.1	9.22e-75	88.33	auxin-repressed protein [Citrullus lanatus subsp. vulgaris]	[more]
XP_022925661.1	1.43e-64	80.00	auxin-repressed 12.5 kDa protein-like [Cucurbita moschata] >XP_023543678.1 auxin...	[more]

BLAST of Cucsat.G2018.T10 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI43	2.58e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518000 PE=3 SV=1	[more]
A0A5D3CMW2	2.30e-77	91.67	Dormancy-associated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B0B2	2.30e-77	91.67	dormancy-associated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103484508 PE=3 ...	[more]
D1MWZ6	4.47e-75	88.33	Auxin-repressed protein OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=CitAuR...	[more]
A0A6J1INZ7	6.91e-65	80.00	auxin-repressed 12.5 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147864...	[more]

BLAST of Cucsat.G2018.T10 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28330.1	1.8e-41	66.67	dormancy-associated protein-like 1	[more]
AT1G28330.4	5.4e-41	65.87	dormancy-associated protein-like 1	[more]
AT1G28330.3	1.3e-34	60.00	dormancy-associated protein-like 1	[more]
AT1G28330.2	1.3e-34	60.00	dormancy-associated protein-like 1	[more]
AT1G28330.5	1.3e-34	60.00	dormancy-associated protein-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008406	Dormancy/auxin associated protein	PFAM	PF05564	Auxin_repressed	coord: 7..120 e-value: 1.0E-53 score: 181.0
IPR008406	Dormancy/auxin associated protein	PANTHER	PTHR33565	DORMANCY-ASSOCIATED PROTEIN 1	coord: 1..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..120
None	No IPR available	PANTHER	PTHR33565:SF2	DORMANCY-ASSOCIATED PROTEIN 1	coord: 1..119

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G2018	Cucsat.G2018	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2018.T10.E1	Cucsat.G2018.T10.E1	exon
Cucsat.G2018.T10.E2	Cucsat.G2018.T10.E2	exon
Cucsat.G2018.T10.E3	Cucsat.G2018.T10.E3	exon
Cucsat.G2018.T10.E4	Cucsat.G2018.T10.E4	exon
Cucsat.G2018.T10.E5	Cucsat.G2018.T10.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2018.T10.C3	Cucsat.G2018.T10.C3	CDS
Cucsat.G2018.T10.C2	Cucsat.G2018.T10.C2	CDS
Cucsat.G2018.T10.C1	Cucsat.G2018.T10.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G2018.T10	Cucsat.G2018.T10-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding