Cucsat.G19718.T8 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATAAAGTAATCAGTCGAATTGTTGAAAATTTTCCGGGGAGGGCACGTATTGTGTTTGATGGATTCATGGTCTCTTGACAAGTGGCAGGTAATAGCAAAAATGATATATATACATAATAGCAAAAATGAGAAGAGGATTTGAATCTTGAAAATAAATGATTGAAGATTGACAACCTGCGCCATACATCAAAGCTTAGCTTGGAGTTGAAATTGGTAACTGGTAAGTATTTTTAAGTCTATTGATGAAAAATATAATGGAGAATTATGTATGGAGTTAGTGAAAGGTTTTATTCCTCTTAATCAACAATAATTATTCTCTGTGATAGATTAAATGCTTATAGGATGAATAGAGAAGAGTTGAAATATTTCATGGGTTCGGGTTTGGTTGTGTTTAATTTGTGATTGTGGTTTGATAACTGATTTAGGTACTCAATGTTTATTATTAGCACAGTAAAACTTTTCTCAAACGTGGGTCTTTTTTCATTTGGGTAAAAAATCTAAATAATTTTTCGTCTATTTCTTTCTCTGTCATTCATATCTCAATTATAATTACAATAAGACATTCATTATTTTGTTTTTTTATGTTATCAAGCACATCCTTTTTTTTCTTCTAAAAACGAAGGAACGGAAAATCAGAAACGGTGAATCGAGAACAAGAAACATGAAAGGAGAATGTTATCCGAACCCTTAATAATTTTTTAATTAAAAAAATATAAGCCATCTTTTTAGGTAAAAGAGTTGGATCTAAAGGCATAAGTTTCTTTTCTTTCATTCTCATACGTTTGTATAACTTTAAATGGAGTTTATACATGAAATTTCATTCATAATTAAGTAATGAAAAGGATAAATCTTTGTAGTTTATACATAAGCTGGAGGTAAAGTGGGATCATAATATTCATGATTTAATTTTTTAATTGACCCGTTTGTTGGTGTGTGTAATGAATAAAGATTGGGAGGGTTGGCCATATACCATAAACAAATGGAACACGTCAAGATTGCAAAGAAAGAGTTTGTATTTCGCACACACGTAGCGTAACGAGACATCTGTCATTTGTATTCTGCTTTATGTGAATGATCAAAACTGGCAGAATAATAATGAAGACATCAATTTCTATCACACCACAACAAGAAGACATATATGGAGATTTGTATCAACCAGCACTTATTATCGCAACATGCTTTGCGGTTACCGCTCTGATGCTCTCCCTTTTCCTCATTCTACAGCATCTCAAGTCTTACTCTAATCCTTCGGTAACCACTTTTTTTGTCACCACTCCTTAACTACAAATGTGAGAACTAGGATCTTCATTTAATTACATGACGATGCGTCGTCTAAGATCATATCACACACCTATGACCTATGCATTGCCCTCAGGAACAAAAGTGGATTGTTGCGGTTCTTTTTATGGTTCCTGTATATGCCACCCAGTCGGTGAGTCTTTCAATCCACCCTCATGGTTGCACATATATTTTTAGTCTCTCACATTTCACACAAGTACAACTTGATTAGTTAAAACCAAACTTATGGTTGCACTTACATTTTTAGTCCCTAAACTTTCATACAAGTAAAACTTGATTAGTTAAAGCTCTAGTTGCTGACGATTTTAGTGTTTGTATTCTCTAGTATATATCCAGTTATAAGTCACAATATTATGTAATCCCTGTACTTAAAATTTTGCAACACTAGTAATTTAGTCTCCTATATTATGAAAAAACTACAAAATTAATTGCGATTTTATCCTATAATGACTTTTCCATGCTTCCAAGGTACATGTATAGTCAAAACAAAAAGTATTCCTCGAGCTTGATATAAATATTTTTTTTTGCTACACGTTAATGGCGTTGGGTCGTTTCTGCTTTCCCAGATTATATCTTTATGGAATTCGAGATTTTCCCTTGCATGTGATATCTTACGGAACTGCTACGAAGCCTTCGCCTTGTATTCTTTTGGAAGATATTTGATTGCTAGTCTTGGTAAGCTTCAGGCCTACCCATGTTATTGTGATTTATATATATACACACACACGTCTATTTCCATATACATATATGTAGTATATATATGGAAATATAATTATGGAACACTGTTCTTCGTTTCAAGTAGATTCTCTTCTCTAAGAAAAATACCTAAGTTCATCTTGGCCAACATTTGCGGATCTCACAAATTGTCAAATCATAATGTGATGCATGACATTAGTTTTTCAAGTATTAACAAATTCGCGTACACAAGTGTTGTTCTTTATTCTTCTCCTTTAATTAATTTTTATAAAAACAGTATTGGGTGAGTGGGTGAGTGGTTCTTACAGAACTAGTCGAAACTTGAAACTACATCACATGCATCAAATTATAATATAGTTTAAAACAGTGTTTGGTTGAGTATGGTTCTTAAATAATCAGTTGGATAACCTTTGTTCTAAATAGAGATCCGTTCCATTTTTACTAATTAGAGTACTGACTTTGATGCAAATAAGTAATTTCATTCTAGGAGAATGAAAGCATGCAAAGTGGTCAAGTACGAGGATTTTTTTCCGAGGAGACGTAAGAGTATTGATTTCATCAATTGATCTACTAAATTTAATTGTTTTAATTCTTGAACCAATTAAACACAAAACCTAGATTTTTACTTTTTCTTTCACATAGTTACTACGTCAACACAATCTTAATCTAAATCTTCATACTACAACAACAAGACAATAGACTAAGCATTAAGAACATTCATCCTAAAAAGTATCACAAAGAATTCATCTTCTCGTGGAATATAATAAAATCCTAGTCTAATAGGACTTCTACGAACAGAACCAAAGATAGAATTTTAAAATATATAAAAGAATCAAAGATGCAAAAGGAAAATGAAGGTGGATAATGGATAACACTATTGACTATTCTTCCATTTCTACGGTTTTTTTTTTCCAATAATTCTTCAAAACTCTTAATGTTCAATGATTCCTACTATTTATACAGATATACATCGGAAGTAACCATTAACATGCGAAAAACAAACAAAAGACTAAGCTGTTGAAAGCACTCACACTTTTGAGTGCTTTCCTGCTCCTGCTCAAACTACAAAATTACATATTACATTTCAAGAAGCCACAAACAATGGCTAACTTCACTCTTTAAGTACAGCAAAAATGAACACTTGGCCTCAAAGGCACGCCTATGCACCGAACAGCCAGAAGATGCATTTAAAGTAAACGTGACAGCATCGATGTACAAGAATAATTTGACTTCCGTGTATGGAGAGGGTGTATGTCTTTGTTTCTTTGAAGATTAGAATACAAGATGGTATCGAGAAAAAAATGCAGTAATTGGTAAAAGACATTCGTCTTGTTTACCAGGAGCCCAGTTGAAATCCACATAATGATAAGAATGTGTTGATGAAATCGATGGTTCCCTTGTGAATATTGAGCTGTTTTTTTTCTAATGGTAAGCCAATAATATTTGATCGAAGCAACATGAATTATCTTTGTTTGTTTGTTGCACAGGGTTTATTGTAGGTCGGGTTGTGGTGAGACTGTATGTAAGACCTGATATAAGTTAAGATCAAGTAAATGCGTGTTACTCTCCAAGGAGATGTTTGACTTGCAAGTTTTACACTTTTATTTTGTTCTTAAATTTCTACAGCCCATTCTAGAGGAATTCAAGCTTAAGAAACCAAAGTTATTAAAATATCGAGTCGTCCACTAATAGTGACAATACTACACTTGGTTTATGTCACATTGCCTAATGGCCTAGTAAGCAGTTCGTTGTACTAATTGCTTCATTTTATGTATAAGCGTGGCATCGAATATACCAAATTAATATATTATGAGTTCTTTATAGCATGCATGCAATTTTTTTTGATGATGCAAGGTGGTGAGAGAAGAGTCATTGAACTACTTGAAAGTGAATCAATAAAACAGCTGGATCAACCTCTAATAGAGGGTGAAGAAAAGAGGTCAAGGTCTCAAAGAACACTGTGGAACTTTCTCCTTAAACCGCATGCTGTTGGAAAAGCTCTGCTCACTATAGAGAAGTTTGGTCTTGTTCAATATGTAGGGCACTGATCTGGAATTCTTTTTCAGCTTGTTCTCGATAATGAGTTTTCTTATGTACATATATTATATGCATTGGTGATTTAGATGATTCTGAAGACAGCAACTGCATTTATAGCATTTATATTGGAGCTTTTTGGAGTTTATGGCGATGGGAAGTTCAAGTGGTCCTACGGGTATGTATTTAAATTTGCACTAATAACCAATGATGATGGTGAATTGAATAGTTTGGTTATGTAACTCTCTACTTTTAAAGCTTATTTTCGAAATGTGATTAAAGCAAGAAATGGACATGTTTTATGTTTAACAAATTTGTAGTGGAATCTATCCCTTATTGAGCAAAATATATCATTCTTACATCTATATCCTCTTGTTATAGTCAACGCCGTTGATATTAGCATTTCTACTGCCTCTGTGCTCATGACCCTTCACGTTTCTACCTTAGTTTTGAAGATTTACATTTGTTTTGCTTCACTTCTGCTTATGCCTTGCTGTATCATGTTTCCCGTAGGTATCCATACATAGCAGTGGTACTCAACTTCAGTCAGATGTGGGCACTATTTTGTCTTGTCCAATTTTATAATGTAACTCACGAGCAACTGAAACCAATAAAGCCACTAGCAAAATTTATTAGTTTCAAAGCCATAGTGTTTGCAACATGGTGGCAAGGTGTAGGTATTGCTCTATTACGTGAACTTGAAGTTCTGCCGAAGGAGGGGAAACTAGAAATTGGACTGCAGGACTTCTTAATTTGCATAGAAGTAATCTGCCTGACTTTGCATTTGGCAGCTAAATTTTCTTCTCAAATTTTGTGTGCCTTGTTTTGTTTATTAAGTATCTAATTCTTTAATTAAACTACTTATGTTCAACTTTGATTAATGTTTTATTCATGGTTTTTGTGTTTTTTTTTTTTGGATGTGTGCTCTTTCTTTTCGAAGTCCTTATCTTTTCTTATTTTTCTATTGAATTGCAGATGGCTATTGCAGCTGTGGCTCATATATTTGTTTTATCTGCGGAACCGTATCGTTACATACCAGTTTCTGCATGTGGAGTGGCAACCATAGAAACAATCAAAGGAGCGTCGGAGGTCAAAGAAGGAAAAGATAAAAAGTCAGCTCTGGTAGAAAGGATGGAAACCCATGTGGAGGCTCCTGGGACGAGCGTCACTGAGAGTGTCCAGGACATAGTTCTGGAAGGCGGCCAACGAGTAAGTAGCGTCTAGACATATGCTCAAAACAGTTTTTAGCATCTCATGTTTAACACTTACGTAGCAGGTTGTCAAGGATGTTGTATTGACCATAAACCAAGCAATAAGACCAGTGGAGAAAGGCGTGGCCATGATACAAGAGACCCTTCACCAGCGAACGATAGGTTCAGATGAATTAGAGTCAGATGTAGAGGTTGAAGAATACGTGGAAGAAAATGGAAATCTTGTTGGAACTAAAGTTGTCTGAGACTTTTTTTTTTTTTTTTTTTTTTTTGCCTTT ATGTATAAGCGTGGCATCGAATATACCAAATTAATATATTATGAGTTCTTTATAGCATGCATGCAATTTTTTTTGATGATGCAAGGTGGTGAGAGAAGAGTCATTGAACTACTTGAAAGTGAATCAATAAAACAGCTGGATCAACCTCTAATAGAGGGTGAAGAAAAGAGGTCAAGGTCTCAAAGAACACTGTGGAACTTTCTCCTTAAACCGCATGCTGTTGGAAAAGCTCTGCTCACTATAGAGAAGTTTGGTCTTGTTCAATATATGATTCTGAAGACAGCAACTGCATTTATAGCATTTATATTGGAGCTTTTTGGAGTTTATGGCGATGGGAAGTTCAAGTGGTCCTACGGGTATCCATACATAGCAGTGGTACTCAACTTCAGTCAGATGTGGGCACTATTTTGTCTTGTCCAATTTTATAATGTAACTCACGAGCAACTGAAACCAATAAAGCCACTAGCAAAATTTATTAGTTTCAAAGCCATAGTGTTTGCAACATGGTGGCAAGGTGTAGGTATTGCTCTATTACGTGAACTTGAAGTTCTGCCGAAGGAGGGGAAACTAGAAATTGGACTGCAGGACTTCTTAATTTGCATAGAAATGGCTATTGCAGCTGTGGCTCATATATTTGTTTTATCTGCGGAACCGTATCGTTACATACCAGTTTCTGCATGTGGAGTGGCAACCATAGAAACAATCAAAGGAGCGTCGGAGGTCAAAGAAGGAAAAGATAAAAAGTCAGCTCTGGTAGAAAGGATGGAAACCCATGTGGAGGCTCCTGGGACGAGCGTCACTGAGAGTGTCCAGGACATAGTTCTGGAAGGCGGCCAACGAGTTGTCAAGGATGTTGTATTGACCATAAACCAAGCAATAAGACCAGTGGAGAAAGGCGTGGCCATGATACAAGAGACCCTTCACCAGCGAACGATAGGTTCAGATGAATTAGAGTCAGATGTAGAGGTTGAAGAATACGTGGAAGAAAATGGAAATCTTGTTGGAACTAAAGTTGTCTGA MYKRGIEYTKLIYYEFFIACMQFFLMMQGGERRVIELLESESIKQLDQPLIEGEEKRSRSQRTLWNFLLKPHAVGKALLTIEKFGLVQYMILKTATAFIAFILELFGVYGDGKFKWSYGYPYIAVVLNFSQMWALFCLVQFYNVTHEQLKPIKPLAKFISFKAIVFATWWQGVGIALLRELEVLPKEGKLEIGLQDFLICIEMAIAAVAHIFVLSAEPYRYIPVSACGVATIETIKGASEVKEGKDKKSALVERMETHVEAPGTSVTESVQDIVLEGGQRVVKDVVLTINQAIRPVEKGVAMIQETLHQRTIGSDELESDVEVEEYVEENGNLVGTKVV Homology
BLAST of Cucsat.G19718.T8 vs. ExPASy Swiss-Prot
Match: Q5BPZ5 (Protein LAZ1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g23070 PE=2 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 8.5e-105 Identity = 204/317 (64.35%), Postives = 235/317 (74.13%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy Swiss-Prot
Match: F4JTN2 (Protein LAZ1 OS=Arabidopsis thaliana OX=3702 GN=LAZ1 PE=1 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 9.2e-59 Identity = 126/310 (40.65%), Postives = 190/310 (61.29%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy Swiss-Prot
Match: Q94CA0 (Protein LAZ1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77220 PE=2 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 3.9e-57 Identity = 131/307 (42.67%), Postives = 184/307 (59.93%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy Swiss-Prot
Match: Q9NVA4 (Transmembrane protein 184C OS=Homo sapiens OX=9606 GN=TMEM184C PE=1 SV=2) HSP 1 Score: 132.9 bits (333), Expect = 6.9e-30 Identity = 65/157 (41.40%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy Swiss-Prot
Match: Q5RET6 (Transmembrane protein 184C OS=Pongo abelii OX=9601 GN=TMEM184C PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 6.9e-30 Identity = 65/157 (41.40%), Postives = 102/157 (64.97%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. NCBI nr
Match: XP_031736779.1 (protein LAZ1 homolog 2 isoform X3 [Cucumis sativus]) HSP 1 Score: 600 bits (1548), Expect = 5.85e-215 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. NCBI nr
Match: XP_004141180.1 (protein LAZ1 homolog 2 isoform X2 [Cucumis sativus]) HSP 1 Score: 600 bits (1548), Expect = 5.68e-214 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. NCBI nr
Match: XP_011648574.1 (protein LAZ1 homolog 2 isoform X1 [Cucumis sativus] >KAE8651487.1 hypothetical protein Csa_019245 [Cucumis sativus]) HSP 1 Score: 600 bits (1548), Expect = 7.60e-214 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. NCBI nr
Match: TYK10819.1 (protein LAZ1-like protein 2 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 562 bits (1448), Expect = 2.05e-200 Identity = 285/312 (91.35%), Postives = 300/312 (96.15%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. NCBI nr
Match: XP_008460003.1 (PREDICTED: protein LAZ1 homolog 2 isoform X5 [Cucumis melo]) HSP 1 Score: 561 bits (1446), Expect = 6.44e-199 Identity = 285/310 (91.94%), Postives = 299/310 (96.45%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy TrEMBL
Match: A0A0A0LFP3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000070 PE=4 SV=1) HSP 1 Score: 600 bits (1548), Expect = 2.83e-215 Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy TrEMBL
Match: A0A5D3CKQ4 (Protein LAZ1-like protein 2 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001350 PE=4 SV=1) HSP 1 Score: 562 bits (1448), Expect = 9.94e-201 Identity = 285/312 (91.35%), Postives = 300/312 (96.15%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy TrEMBL
Match: A0A1S3CB20 (protein LAZ1 homolog 2 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103498920 PE=4 SV=1) HSP 1 Score: 561 bits (1446), Expect = 3.12e-199 Identity = 285/310 (91.94%), Postives = 299/310 (96.45%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy TrEMBL
Match: A0A1S3CBH9 (protein LAZ1 homolog 2 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103498920 PE=4 SV=1) HSP 1 Score: 561 bits (1446), Expect = 5.99e-199 Identity = 285/310 (91.94%), Postives = 299/310 (96.45%), Query Frame = 0
BLAST of Cucsat.G19718.T8 vs. ExPASy TrEMBL
Match: A0A1S3CCP7 (protein LAZ1 homolog 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498920 PE=4 SV=1) HSP 1 Score: 561 bits (1446), Expect = 6.21e-199 Identity = 285/310 (91.94%), Postives = 299/310 (96.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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