Cucsat.G19663.T2 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G19663.T2
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionChlorophyll A-B binding protein
Locationctg4: 4425527 .. 4431504 (-)
RNA-Seq ExpressionCucsat.G19663.T2
SyntenyCucsat.G19663.T2
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAAAAATTGATTGTCCCGAAGAGCCGAAAAGTAGTTTTGTTTGGAAAGGGCGTAAGGGTAAAAAATGTATCAAATTTAAATGAGTAAAGCGACTGAAAATTTAGGGGAAAGCACAATTTCGAGTCAACCAATTCAATTTCATTTCATTCTAATATGGTGGAGGCAAGCAATATTAGATATATCCGTTTGATTGGATTAGAACAAGCTCTGTACAGCCATCAGTGAGCGTCATTGCACAAATGTCATTCTCTATAAGATAATGTGTTGATGTGGGCATCTCAAATCTATAAATGGATAAGCATTCATGCAGGAAGGCGTTGCACTTTGGACATGGCTGCTGCTTCCACTGCGCTGATTCTCCCCATCAATGGAGGAAACCTTCCGCCTTCCCAATACCTCTCTTTTCGCCATACTCTCCCTTCTGCTACTTTCTCCAGGTAATTTCGCCTTCTTCCTCAGATACCCATTTCTCCAATCGATCTAATTCATGGGGTTTCCCCCTTTTTCGTACCATGTGGATTCTATCTTTGTAATTGGGATTCTTTTCTTGCTTTTCAAGGACGATGGGTTTCTATGTTAATTTGGGGATTTGTGTCTAAACTTTTATATGTTGTCAAACTCTTTGCTCCAATTGGTGTTTGATGGTTTCTGGAAAATGTTACAAGTTACAGAGTGATGAATAGAAGCTTCTCTTTTCTTCTCTCTCTCTCTCTCTTTTTGTCATTAGAGTTTGGATTGCTCTGAGACGTTTTGGAATTATTGAGTTCCTTGCTCTGGTTATTGGTTAACGCATTTAGTTTTGTAAACATGATCTTGGAATCTTTTGTAGCCGATCATTAGTATTTTGTTTTGTTTGAATACACATCCTCTGATAACTTTCACCTTTTTCGACACCTTGGCTTTCCAAATGATATCAACAAAGATCCGGTCAAAAGGAGCATGATGGTCATGGGAAATGTTACAACTCTTGTTTTTGAAGTATCATCTAACAAATAGGCAAAGACCAAGGAACTGAAACAATACTCAACAAATTTGTTTAATTTATTTTTTGCCTCGATCTTTGATTTTTTTAACAATTTAATTTTCATGAAATAGTATTTTGTTGCTGTTAATTGCTGTATCATTCTTGATAGTTCCTTTTCCTTCCAGGTTGGGTTGGAGTAGGGATGCTGGCAGAAGTACTCGTAGAACGAGGGGTCAAGCATTTCGAATCTCTAATGTACGCTTCAACTCAAGGCTTCTACATGTTTAATGGCAATATATTTGGTTTGAATATGGTCAAAGATTTTGTAGGTATGTCATACAGATTAATTTTGGGGGTGTGTGGGGGGATCCTTTATGGTAACATATATTTAGAGAAATTTTCCCCACACTCACTTGGATTTGAATATCGTTATAGTATATATGTAATTGTAGGAGCTTATTAGTCTTTTGTCCTTTGTTGTAATTTATTAGTCTTTATGTAGGGTTTTCATGTACGTCTCTTATGACCAATTATCATCTCCTACATGTTCGTTTGTTAAATTTCTTGACTTTGTCTTGATACCTAAGACCATTCATGAAGCTTAGTCTCATTATGGGTGGCGCAATGCGATGATTGAAGAAGTGAATGCCTTAGATGATAATGGTACTTAAGATTTAGTATCTCTTTCGGCAGGAAATAAGACTATTGGGTGCAAATAGGTGTTTGCAACTAAAGTTAATCCCAATGGATCAATAGCTCGTTTAAAAGCATGCATTGTTGCTTAAGGTTATGCTTAGATGTATGGGGTTGACTATTTTGATGGATTCTCTCCTGTTGCCAAGCTTATTTATGTTAGGTTATTCATTTCTATGGCAGCATCTCAAGATTGGCTTTTACATCAGCTTGTCATTAAAAATGTTTTTCTCCACGATGATCTTTAGGAGGAAGTCTATATGGAGCAATCACTTGGGTTTGTTGCTCAGGGGGAGAACAATAAAGTGTTTCGCCTTCGGAAATTCTTGTATGGGTTGAAGCAGAGTCCATATGCATGGTTTGAAAACTTTGGTAAAGCACTTGATCTGTTTGGAATGAAGAAAAGTAAATAGGATTACTTAGTTGTCTATCGAAGATCTATGAGTGGAATTGTTCTACTTGTTGTATATGTTGATGATATTGTTATAAGTGGCAATGACAACATGTATATTGTCTTTCAAATCTTTCATCTAAAGTCAATTTCACACTAAAGATTTGGGAGTGCTGAGGTACTTTTGGGGCATTGAAGTATTGAGAAGCAAGAAGGGTATTTTTATGTCAGAGAGAAAATATGTGCTTGATTTGCTATCTGAGACAGGAAAAGTGGGAGCCAAGCCATGTACTCCAATGATGCCTGGTCTACAAATGTTAAAACATGGAGAACTATTTGAGAAACCTAAGAGATATATGAGATTGGTTGGGAAGTGAAAATACCTTACAATAATATGTCCAAACATAGCTTATTCGGTAAGTATTTTGAGTCAATTTATGACTTCACCCACAGTGAAACATTGGGATGTAGTACAGCAAATTCTATGTTACCTTAATGCTGCATCTGGACGTAGGATCTTATATAAAGATCATTGTCATATGAACATTGAACATTTTTCAAATGCCGATTGGGTAGGATCAAAAGAAGACGGAAGAACGACTCTTGGGTATTGTGTTTTTGTTAGAGGCAATTTGGTTTCATGGAAGAGTAAGATGATCAAGTGCTGAGTCAGAATATAGAGTAATGGCACAATCAATGTGTGAAATAATGTGGTTACATCCAGTCTTGAATGAGTTGGGTTTTAATACTACAATTTTGACTAAGTTGTGGTGCGACAATCAAGCAGCTCTCCTAATTGCATCTAACCCAGTATTTCATGAGTGCACTAAACATATTGAAATTGATTGTCATTTTGTTTAGAGAAAAATACAACAAGGTTTGGTGTCTATTGGATATGTGAAGACTACAGAACAATTAGGGGATATCTATACAAAATTTTTGAATGGAGTTCGAATTGAATACCTTTGTAACAAGCTGGGCATGATTAATATATGTCCTCCAGCTTGAGGAGTGTTATACTATATATGTAACTATTGAACCCTATTAGTCTTTTGTAAGGTTTTGTAATTTACTAGCCTTTATTTAGGGATTCCATGTATGTCTTTTGTAAGCTATGTTTGGACATATATATTGAACTCTATTGTATCTATGGTATCAAATGAAGTAAGAAAGTTATTTCATATTTCGCTCTAACTACAACCAATGTAATCTATCTTTCAGCATCTCTTAGATTGCAACAAAATTGATGAGGTTGTCTGTCTGGTTCCTTAGATTTAAGTCTATTGCAGTTGAGATTATCGTTCTGTTTCTTCCTATGCTAGTTGTTCGATCTTATTAATTTTATTTACTTTGGAGAATCTGTGATTGAATGCTTAATCTACTTTTGTACCCTTTTTTATGAAGCTGCAATGCATTTCCTCGTTTACTTCATGTAATTTAATATACCTGAACAATACAGTATAGGAACCCCTTTATTATATTTAAAATGGTTTAATTCTTGTTCTCCAATTAAAGTCACTTTCTAAGTTGTTTGTGTGTTTTTATTCTACAACAAACATATCATGCCAATTGTTCAGGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGGTAAAGGAAGTGATCATCATCAATGATGCAAAACTTGTTTACAAACAATATGGATATTTTCCCCAAGATCTTTTTTGGAGAAGAGAATGACGGCAAATAATGTTGTGAAAATGTAAATGCAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGATTGGGAGTGTTAACTTAAAAAACTTGGAAAAATTATTAACTACCAAATTTTATAAGGTTAGGAGGTAGTCTCCATTTTTCATTTGAGTGAACATGGAGGTGGAAGCTTCATCACATGTTGAAGGGTTGGACAAAAGTAACCGGGTTTTTAAAGCTTTTGACTCTAATAATTAGTAACCTCTTTTGTCTCTCAGTTTTAGGCTCCCTAAGCTATTTAGGATAAAATATTTTCGAGCTTCTCTTCTCTTTCTATCCTAGAGGTTGGTGTTCGATGTTTGAGGAGGTGCTCTTGAATCCTCCTTAAAGTTTCTTTGTTTGGTCTTCTTTATTTGATTTGTTGTTGAGCATGTGGCTTGAGAAGAACAGTAGCTTTTTTTCAATAGGTGGAGTGGTTTGGAAAGGATCTTTGGGATTTGATTAGGCTTAATTGCTATCGTGGGCGTTAATAACGCTTTTGTTTGTTTGTTTGTTTTGTTTTGTGTTGTAAATATAGCTTACCATTATTCTTATGGATTGAATTCCTTTCTATAATTGGGTGTGAGTGTTGTTTTGTTTTGGCTTATTTTTGTACATCTTTCTGTATCCTTTCATCTTTCTCACTGAGTGGTTTTTTTATTTAAAGAAAATGTAGATAATAGTCTTTTATTGGGTTTTGAACTTTTAGAAATTTAGGACTCATCGATTATGTTTCCTTCTTTCGAGTTTTCTTTTGGTAGCCTTCAGTTTTCTGTTTTTGGTTTCTGCCACCACCATTTTCTTTTCTTTCTAATCTACCCGAATTTTAAAAGGAGAGCAGTTATCAAAAGTATAGCTTTTGTTAATCTCTCTAAGCTTTCAAATAAGTTTCCATGAAATAGGAAACAATCTTAGTTTTGAAAGGAGCTATACAGAACATAGCTTTTGTTTTTAAGTATGTGTAAGTTTTCAAGTTTCCATAAAAACAGTAAACAAGCTTAGTTTTTATAAACAAAGAAACTAAAAATGAAAACATAACATTACAGTATATAGATATGTGATGCGATGTGATGACCAATGTGTGTTATTTTCCAGTTACTGTGTTCCATGAACCGTGAACAAGCTTTAGTGAAAATGTAACACTACGGTCTATATAGATCCGGAGATGTGATGACCAACATGTGTATAGCCCAATAATCCAATATTATGTTTTTTCTTCGCTTATTTTTCAGTTGGCTGACTACTTCAGCATCCTTATCAACTTCTTCATACGGTAAGAGGCATCTCCGAGGGGAAAAGGAGATCTTTGAATGAAAGAGGTATTCTCTTGTCGACCCTTGAAAATTTAGCATGTTAAGAACATTTTCAAGCAAGTCATTGCTTGTTTGCTGTAAAAAAAAATCTGGTGTTGAGGATATTCTCTTCTCCTTTGAAGTCTAATTTGATTTCTTCACATTTCATATACAAAGATTTTCATTTAATTGTGAAGGCGGTGAGATGAAGCAGCAGGTTCATGGTACTTTGTTTTGAAGATTCTATTTGCAATACAATTATATGTACTACCATTTGTTTTTTTAAAAATCAGTACAAGATTTCATTTCCAAGGAGAGGAAAAACCACCATAGTTCTGTACAATTATTTGGTGAAAAGAAGCTTGTCTCTTTTTTTTAAAAGAAAAAGAAATAGACTGTCGTTGTCTATAAGCTGATTCATCTTCCAATATTTGCAAACAACAGCGTTGTAATGTAAGCATAGATTAGAATTCAGATGAAAATTCAGATGAATTAGCTTTGATGATTCTTCTATTGAATTCCTGTTATTGTTGGTTACCTTCCAAAATGTCTTCCTTAGAGATCTCTTCTCATGGTAAGTACACTTGTGGAGTGTTTGTTGAAGAATGGAATTTGGGAGGGAAAAACTTTGAGTTTTTAATAGACAA

Coding sequence (CDS)

ATGCCAATTGTTCAGGTCTCGCCTGGTAGGGATGGATTAATCAAGCAGGTGATTATGGTTGACCCTTTGGAAGCCAAACGTATGGCAGCGAAAGAAATGGAAAAGATCAAAGCAAAAGAGAAGTTCAAGAGAAGACGTCAAATAGAAGCAATTAATGGAGCATGGGCAATGATCGGTCTGACGGCTGGGCTTGTCATTGAAGGTCGAACCGGAAAAGGAATTCTAGCCCAGGTGAAAAGTTATAGCCTCTTGACATTTAATTTAACCCTGTGTCCCCCTTGTTGTTTCCCCTTCTTACCTTCAACAAGGTTATACTGGTTTAGAACATTTGTTGATTCCTTTATATGA

Protein sequence

MPIVQVSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLVIEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTRLYWFRTFVDSFI
Homology
[Close]
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match: KAA0055599.1 (uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK01325.1 uncharacterized protein E5676_scaffold29G00030 [Cucumis melo var. makuwa])

HSP 1 Score: 155 bits (393), Expect = 5.54e-46
Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 62  VSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 121

Query: 66  IEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTR 103
           IEG+TGKGILAQVKSYSLLTF LTL     FPFL   +
Sbjct: 122 IEGQTGKGILAQVKSYSLLTFLLTL-----FPFLTFNK 154

[Close]
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match: XP_011648927.1 (uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical protein Csa_021338 [Cucumis sativus])

HSP 1 Score: 142 bits (357), Expect = 2.08e-40
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 81  VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 140

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           IEGRTGKGILAQ+  Y  +  N
Sbjct: 141 IEGRTGKGILAQLADYFSILIN 162

[Close]
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match: XP_008451793.1 (PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451800.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_008451808.1 PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo])

HSP 1 Score: 137 bits (344), Expect = 2.07e-38
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 83  VSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 142

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           IEG+TGKGILAQ+  Y  +  N
Sbjct: 143 IEGQTGKGILAQLADYFSILIN 164

[Close]
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match: XP_023538320.1 (uncharacterized protein LOC111799137 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (337), Expect = 9.51e-38
Identity = 68/82 (82.93%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPG+D LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL+
Sbjct: 52  VSPGKDNLIKQVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLI 111

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           +EG+TGKGILAQ+  Y     N
Sbjct: 112 VEGQTGKGILAQLAGYLAAVVN 133

[Close]
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match: XP_023538319.1 (uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134 bits (337), Expect = 1.10e-37
Identity = 68/82 (82.93%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPG+D LIKQVIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL+
Sbjct: 57  VSPGKDNLIKQVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLI 116

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           +EG+TGKGILAQ+  Y     N
Sbjct: 117 VEGQTGKGILAQLAGYLAAVVN 138

[Close]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match: A0A5A7UQ54 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00030 PE=4 SV=1)

HSP 1 Score: 155 bits (393), Expect = 2.68e-46
Identity = 85/98 (86.73%), Postives = 88/98 (89.80%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 62  VSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 121

Query: 66  IEGRTGKGILAQVKSYSLLTFNLTLCPPCCFPFLPSTR 103
           IEG+TGKGILAQVKSYSLLTF LTL     FPFL   +
Sbjct: 122 IEGQTGKGILAQVKSYSLLTFLLTL-----FPFLTFNK 154

[Close]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match: A0A0A0LH95 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1)

HSP 1 Score: 142 bits (357), Expect = 1.01e-40
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 81  VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 140

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           IEGRTGKGILAQ+  Y  +  N
Sbjct: 141 IEGRTGKGILAQLADYFSILIN 162

[Close]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match: A0A1S3BSE0 (uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492970 PE=4 SV=1)

HSP 1 Score: 137 bits (344), Expect = 1.00e-38
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSP +DGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV
Sbjct: 83  VSPAKDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 142

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           IEG+TGKGILAQ+  Y  +  N
Sbjct: 143 IEGQTGKGILAQLADYFSILIN 164

[Close]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match: A0A6J1FHS7 (uncharacterized protein LOC111444076 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 2.65e-37
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPG+D LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL+
Sbjct: 52  VSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLI 111

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           +EG+TGKGILAQ+  Y     N
Sbjct: 112 VEGQTGKGILAQLAGYLAAVVN 133

[Close]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match: A0A6J1FC77 (uncharacterized protein LOC111444076 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444076 PE=4 SV=1)

HSP 1 Score: 132 bits (332), Expect = 3.08e-37
Identity = 67/82 (81.71%), Postives = 74/82 (90.24%), Query Frame = 0 

Query: 6   VSPGRDGLIKQVIMVDPLEAKRMAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLV 65
           VSPG+D LIK+VIMVDPLEAKR+AAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGL+
Sbjct: 57  VSPGKDDLIKKVIMVDPLEAKRLAAKEMEKIKAKEKFKRRRQIEAINGAWAMIGLTAGLI 116

Query: 66  IEGRTGKGILAQVKSYSLLTFN 87
           +EG+TGKGILAQ+  Y     N
Sbjct: 117 VEGQTGKGILAQLAGYLAAVVN 138

The following BLAST results are available for this feature:
BLAST of Cucsat.G19663.T2 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G19663.T2 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0055599.15.54e-4686.73uncharacterized protein E6C27_scaffold222G00820 [Cucumis melo var. makuwa] >TYK0... [more]
XP_011648927.12.08e-4090.24uncharacterized protein LOC101212671 [Cucumis sativus] >KGN61133.1 hypothetical ... [more]
XP_008451793.12.07e-3886.59PREDICTED: uncharacterized protein LOC103492970 isoform X1 [Cucumis melo] >XP_00... [more]
XP_023538320.19.51e-3882.93uncharacterized protein LOC111799137 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023538319.11.10e-3782.93uncharacterized protein LOC111799137 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Cucsat.G19663.T2 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UQ542.68e-4686.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LH951.01e-4090.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G058660 PE=4 SV=1[more]
A0A1S3BSE01.00e-3886.59uncharacterized protein LOC103492970 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1FHS72.65e-3781.71uncharacterized protein LOC111444076 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FC773.08e-3781.71uncharacterized protein LOC111444076 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 20..71
e-value: 6.0E-5
score: 23.6
NoneNo IPR availablePANTHERPTHR37752:SF1OS02G0610700 PROTEINcoord: 5..83
NoneNo IPR availablePANTHERPTHR37752OS02G0610700 PROTEINcoord: 5..83
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 37..79

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G19663Cucsat.G19663gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19663.T2.E1Cucsat.G19663.T2.E1exon
Cucsat.G19663.T2.E2Cucsat.G19663.T2.E2exon
Cucsat.G19663.T2.E3Cucsat.G19663.T2.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G19663.T2.C2Cucsat.G19663.T2.C2CDS
Cucsat.G19663.T2.C1Cucsat.G19663.T2.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G19663.T2Cucsat.G19663.T2-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0046872 metal ion binding