Cucsat.G19543.T10 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G19543.T10
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Auxin-responsive protein
Location	ctg4: 2001082 .. 2005579 (-)
RNA-Seq Expression	Cucsat.G19543.T10
Synteny	Cucsat.G19543.T10

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACAATTTAATCTAAAAAGGTTAGAAAAAGAAAGGAAAAAATAAACTCCCAAAACGACCCCTCTTTCCGCAACATACGATAGAGCCATTTCTCAACATTTATAAACCCAAAATCGTAATTTCAACTCAAATTCCAACGCCACTTTTCCAAAAGAAAAAAAAAGCAGGTCCATTTGACAGAACTTAATAATTAATATAACATATCCAATTCCAATTCCAAGCCCCAAATCCCAAGTTCGTCCGTTCTCAAACAAACAAAAGAAAAACTCTCGATCTCAGCGATTTCACTACCAAAATCAAAGACAGAATTACAGAAAAAATTTCAATTCGAATTCGGAGAAAATGGAATCAGGGCAGAACGATGAGTACAGAGCGATCTTGATCAATTTCGAGCAGACGGAGCTTCGGCTTGGCTTGCCCGGCGGCGACGGCGGCGGTGGGAAGAGTAGTTTGGCGGGGAAGAGAGGGTTTATGGAAACTGTGGATTTGAAGCTTAATTTAGCTTCTTCAATGGCGTCGGCGAAGGAAGAGGCAACGAATTTGGAAGAGATTAAAACTTCTTCACAACAGCCTAATGATTTTGCTAAACCTCCGTCGAAGTAAATTTTCTTTCTCTCCTTTTCTCATTCATGTTTATGCTTAACTTATATTAGAAAAAATATCTCTTAATTTTCTTGTTTGATTTTAAAAATATGAATTTATGTTATTTTCAAATATATTTGAATGATCATATTTTATCTCATTTTTTAAAACTATTTTTAGAGAATTATTTAGATATATAGTATTATGAATGTCCTTTGTAAAGTTTAGAGTATTTTTCATATCTATAATCTATATATTGAGTGAAAATCAATAGAATTTGAGTTATTAAGAACTAATTTTTTGCTTTATTAAGATACAAAAAAATTGATTTGTTTCAAAAGGGTAAAATTAAAATTAAAATTATAATAGCATCAACTTTGTTTCTTTTTCTTTTTCTTTTTTTTTAAAAGCACATTAACTTTGTATTTTCTTTGTTATATATATAAAAAGTCCATTTACATAGAGTTCAATTGCCATTAGTCTTAGGAAAATAAAAGGTGATTCGTAAATTTTCTTTTATTCTATGGTTAACTAATTAAAAATGTTTAGCCATTTCTACTTCTATTTTGTTTTATTGTCATTTCCATTTTAGTTATAGAATTAAAGTGAGAAACTTAAATTTTTTAGTTCATTATTGATTTAACTTAGTAATATATATTCAAATTCTTGATATCAAAATGGTATTTTAATCATATGTGAAGCGTGATTATATTATAAAACAATTTGATGAATTAGTGTCAATCTAAAAATTTAAATCTTTTGATCTTCAAAGCTTCGTTTTTGTTTTTAAATTCATATATTTATATCAATTATTTAAAAATATTTTTCTTTTTCCCACTTGCTTGCCATTGTTAAAAAATAATCTAAGAGATATTATTTTTTTTTACTGATAAAATTTCCATTTCAAGACTAATAATAAACGGTACAAGAACATTTTTAAAAAACAAGAATTATAACAAAATTTATGAATGAAACTTCTATCGGTAATAAATTTTATAATAAGTGAAATTTAAATTTTGCATATTAAATCTAAATATTATATATATAACTCCCCACTCGAATATATATTTATATATAGAGAGAGAATGATTGTTGAAGATGATTGAAAAGGAGTTATTGGGATTATAAAAAAAAAAAGAAAAAGAAAAGGTTAAGATGACCTTAGAACACAACAAAGGTTAGAGAAGTTTGAATGCTTCGGTTGGTTGGTTGTCGGGAAAATTATGCAAAATTACAAAACATAACGAATCTTTTGCTTTTTTTCTCACCAACCAAACATTCAACAAAAAACTTAAGTGTTTACTCCTAAAATAGAATTGCTTATAAATTGACTTTTTCTTTAATTACAAAATTAATATCTTCAACTCTAAAATTAATCAAGATTCAAAAAAAGGAAAAATGATCCATTACTTCATTATATATTTTATTTGAGAAAAAAAAAAGATTTTGAAAGGAATTATATTTTGGTTGTTAAGGTTTCATTACATAACCATTTCACTTTTAACTTCTAAAATTAAGTTTATAAACACTATTTTCACTTATAAATATATTTTTAGTTATGTTATTAAAAATCAAGCTCAAATTTGAAAATTATAGAAGACAAAAGGTTGTTTTCAAAAGATTTACAAATATAACAATATATCAATTGTGTATAGACTGTTTATATTTGTAAATATTTTTAGTAGATTTAGTTGAGTGTATTTGATTTTTATAATAAATTTAGATTGGAGTTAACGATTCAAACACAATTGAAGAGAGTTTTATGAATACATGTCTATTCACGATCATGGATGGGCCGATTGGATATGGCCCAAGCTCGGTCTAGGGCTAGGCCTCCCGGTGACTCAAGTGTCAACCCTTGGAAGGCTTGAACTTAAGTCATTGGATGATAATTTATTGGGAAGAAGTTAGTTGAGGTAATTTGAAGTTTGGTTAAATTGATAACAGAGCACAAGTAGTGGGTTGGCCACCAGTACGATCATCTCGAAAGAATTTAGGAGTAGTGTCGTCAAGGAAGGGGGGAGATGAGGGCGGGGCCGGGGGGTCGTTCGTAAAAGTAAGCATGGACGGTGCTCCTTATTTACGGAAGGTGGACTTGAAGTTATACGCCAGCTATAAGGAACTCTCTCATGCTCTTGCTCAAATGTTTAGCTCCTTCACCATTGGTAATCAATTTTTTTCCTTTTTCTTTTTCTTTCATATGGACAATCAGAGTCAATATCTATACATGTTTTACTGCTTTTATGTACGTTTTATAAATTTAATAATAATCAAGCTTTTCATGTGCAAACTTTTGATATTATTTATTTCTGGCACAATAATTTTATTTCTTTTTCTAGTTTAGATTCTAAAAGATTTGGTTAAATATTTTATTTTCAATGCGCAGGTTTTTTTTATGAATCTTTTAACATTAAAACTAAGTTATAATACATAAATTGGGAGTAGGAAAAAATCCAAATTAAAGCTTACTGTATACTTGATACTACATATTGTAGGGTTGACATTACATTACATGCTTCTTTTTAAACATTTTGGCTTAATTCTTATGTTTTTTTCTTTTAATAGTTTAAACGGGTAAGGGATATACTATTGGTTATGAGGTTATTTGTTTGAATCTTTGGACACATCTATTTTTACCCATGATGTAAAAATAAAACATGGTATTTTGTCCATTGTTTGGAGTTTGATATTCGAAAGAAAAATGGAAGGGGTTTGATGAATTTTTGAAAAAATTATTGTAAATGATGAATTTTTTATAATAAAATATCTAGAAATCTGTCAATATATATATATATATATATATATTTGAAAATGCACATAAATTATTTGAGTAATATATATTTTGAGATGGGAATTGACAGGAAAGTGTGAATCAGAAGGGATGAAGGATTTCATGAATGAAAGCAAATCAGTAGACCTTTTGAATGGGTCAGAATATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTTGGGGATGTCCCATGGGAGTAAGTATTATAATCAATTTTCATTCATTGTGCTTTACAAAGTATAACTAAATGTCATGTTAATTTGACATAGGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGAGTCTGATGCCATTGGATTAGGTAAGTCATCATCTTCTACTGTTTAAAATTAGGTAAACTATATCTCTCTCGTTTATGTATAAACAACATTTAGAAAAAATAATTGATTAAATGGTAAATTTGATCCCTATAGTCTACAAAAAGAAAAATAGTTAGAAATTCAAATCAATTTATACTTAAAATTTAGTCCTATTATTTTTAAAATTTTATTGAATCATAATAATTAAATTTTAACTTTCTTTCTACACTAAATATGTAATTTAATAAAAAGTAACTTTGATTTTTTTTTTAAAAATACAATGGGCTCAATATTTAATGTTATCACAATAGATTGCATGAAAAAGATAAATAAAAGAATATAAAGTTATCTATACATATACATATACATATGTGTTAATGTGTACATATTTTCTTTTGGATATATCTTCTTGATTTTTTAAATTATTTTCCACATACTTTCTTTAGGATCTATCTTCTGATTTTTTTTTAAATAATTATTTAATCATTGACAGCACCAAGATCAATGGAGAAACAAAAGAACAACAGAAGCTGAGCTGTTTTTGTCAATTTAACAATTTGTTTGATATGGTACCAATTTTCAATTTTTTCTTCTTCTAAATTAATATAATATATCTATATATATAAGAACAATTGGTGTTGAATTTGTAGGGATGCTATATAAATTCAACATTAGCATAGAGTGGTTTTAATTTCTACTTCAAACTTTAATTTCTCCCATCTCTATATTGCATTATTTTATGATAATCATCTTGACGTATTCATTGGTGTACGTACATATATAAG

Coding sequence (CDS)

ATGGAATCAGGGCAGAACGATGAGTACAGAGCGATCTTGATCAATTTCGAGCAGACGGAGCTTCGGCTTGGCTTGCCCGGCGGCGACGGCGGCGGTGGGAAGAGTAGTTTGGCGGGGAAGAGAGGGTTTATGGAAACTGTGGATTTGAAGCTTAATTTAGCTTCTTCAATGGCGTCGGCGAAGGAAGAGGCAACGAATTTGGAAGAGATTAAAACTTCTTCACAACAGCCTAATGATTTTGCTAAACCTCCGTCGAAAGCACAAGTAGTGGGTTGGCCACCAGTACGATCATCTCGAAAGAATTTAGGAGTAGTGTCGTCAAGGAAGGGGGGAGATGAGGGCGGGGCCGGGGGGTCGTTCGTAAAAGTAAGCATGGACGGTGCTCCTTATTTACGGAAGGTGGACTTGAAGTTATACGCCAGCTATAAGGAACTCTCTCATGCTCTTGCTCAAATGTTTAGCTCCTTCACCATTGGAAAGTGTGAATCAGAAGGGATGAAGGATTTCATGAATGAAAGCAAATCAGTAGACCTTTTGAATGGGTCAGAATATGTACCTACTTATGAAGACAAAGATGGAGATTGGATGCTCGTTGGGGATGTCCCATGGGAGATGTTTGTTGATTCATGCAAACGTTTGAGGATCATGAAAGAGTCTGATGCCATTGGATTAGGTAAGTCATCATCTTCTACTGTTTAA

Protein sequence

MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSSLAGKRGFMETVDLKLNLASSMASAKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSSSTV

Homology

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BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.5e-68
Identity = 148/235 (62.98%), Postives = 173/235 (73.62%), Query Frame = 0


Query: 13  LINFEQTELRLGLPGGDGGG---GKSSLAGKRGFMETVDLKLNLASSMASAKEEATNLEE 72
           +INFE TELRLGLPGG+ GG   GK++  GKRGF ETVDLKLNL SS A       +LE 
Sbjct: 1   MINFEATELRLGLPGGNHGGEMAGKNN--GKRGFSETVDLKLNL-SSTAMDSVSKVDLEN 60

Query: 73  IKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRK--------GGDE--GGAGG- 132
           +K          KPP+KAQVVGWPPVRS RKN  V+S +K        G D+  G +G  
Sbjct: 61  MK------EKVVKPPAKAQVVGWPPVRSFRKN--VMSGQKPTTGDATEGNDKTSGSSGAT 120

Query: 133 ---------SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDF 192
                    ++VKVSMDGAPYLRK+DLKLY +Y++LS+AL++MFSSFTIG    +GMKDF
Sbjct: 121 SSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDF 180

Query: 193 MNESKSVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 225
           MNESK +DLLNGS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMK S+AIGL
Sbjct: 181 MNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

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BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.1e-66
Identity = 143/232 (61.64%), Postives = 163/232 (70.26%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGDGGGGKSSLAGKRGFME-----------TVDLKLNLASSMA--SA 73
           + FE+TELRLGLPG   GG +  L  KRGF E           TVDL LNL+S  A  +A
Sbjct: 1   MGFEETELRLGLPG--NGGTEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTA 60

Query: 74  KEEATNLEEIKTSSQQ----PNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGD---E 133
              A   ++ KT  ++    P D AKPP+K QVVGWPPVRS RKN+  V    G +    
Sbjct: 61  AAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKN 120

Query: 134 GGAGGSFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNES 193
                SFVKVSMDGAPYLRKVDLK+Y SY+ELS +L +MFSSFT G CES+GMKDFMNES
Sbjct: 121 SSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGMKDFMNES 180

Query: 194 KSVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLG 226
           K  DLLN S+YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMK  +AIGLG
Sbjct: 181 KLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLG 230

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BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 246.9 bits (629), Expect = 2.2e-64
Identity = 138/221 (62.44%), Postives = 165/221 (74.66%), Query Frame = 0


Query: 14  INFEQTELRLGLPGGD---GGGGKSSLAGKRGFMETVDLKLNLASSMASAKEEATN-LEE 73
           +N ++TEL LGLPGG        KS +  KRGF ETVDLKLNL S+     +  TN   +
Sbjct: 1   MNLKETELCLGLPGGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDLNTNGAPK 60

Query: 74  IKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGD------EGGAGGSFVKV 133
            KT  + P   +KPP+KAQVVGWPPVR+ RKN  V++++K G+       GG   +FVKV
Sbjct: 61  EKTFLKDP---SKPPAKAQVVGWPPVRNYRKN--VMANQKSGEAEEAMSSGGGTVAFVKV 120

Query: 134 SMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLNGSE 193
           SMDGAPYLRKVDLK+Y SYK+LS ALA+MFSSFT+G   ++GM DFMNESK +DLLN SE
Sbjct: 121 SMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSE 180

Query: 194 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 225
           YVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMK S+AIGL
Sbjct: 181 YVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

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BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.5e-64
Identity = 137/230 (59.57%), Postives = 166/230 (72.17%), Query Frame = 0


Query: 13  LINFEQTELRLGLPGGD---GGGGKSSLAGKRGFMETVDLKLNLASSMASAKEEATNLEE 72
           L+N + TEL LGLPGG        KS++  KRGF ETVDL LNL S+    KE + +L+ 
Sbjct: 5   LMNLKATELCLGLPGGAEAVESPAKSAVGSKRGFSETVDLMLNLQSN----KEGSVDLKN 64

Query: 73  IKTSSQQP---NDFAKPPSKAQVVGWPPVRSSRKNLGV----------VSSRKGGDEGG- 132
           +    ++     D +KPP+KAQVVGWPPVR+ RKN+             SS K G+ GG 
Sbjct: 65  VSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGG 124

Query: 133 -AGGSFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESK 192
            AG   VKVSMDGAPYLRKVDLK+Y SY++LS ALA+MFSSFT+G   ++GM DFMNESK
Sbjct: 125 AAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESK 184

Query: 193 SVDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 225
            ++LLN SEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMK S+A+GL
Sbjct: 185 LMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

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BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot
Match: P93830 (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 240.4 bits (612), Expect = 2.1e-62
Identity = 134/219 (61.19%), Postives = 160/219 (73.06%), Query Frame = 0


Query: 11  AILINFEQTELRLGLPGGDGGGGKSSLAGKRGFMETVDLKLNLASSMASAKEEATNLEEI 70
           ++ +N  +TEL LGLPGGD     +    KRGF ETVDLKLNL +  A+ KE +T  + +
Sbjct: 4   SVELNLRETELCLGLPGGDTVAPVT--GNKRGFSETVDLKLNLNNEPAN-KEGSTTHDVV 63

Query: 71  ----KTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSFVKVSMD 130
               K  S  P D AKPP+KAQVVGWPPVRS RKN+ V   +  G  G    +FVKVSMD
Sbjct: 64  TFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSG--GPEAAAFVKVSMD 123

Query: 131 GAPYLRKVDLKLYASYKELSHALAQMFSSFTIGK-CESEGMKDFMNESKSVDLLNGSEYV 190
           GAPYLRK+DL++Y SY ELS+AL+ MFSSFT+GK    EGM DFMNE K +DL+N  +YV
Sbjct: 124 GAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYV 183

Query: 191 PTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 225
           P+YEDKDGDWMLVGDVPW MFVD+CKRLR+MK SDAIGL
Sbjct: 184 PSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

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BLAST of Cucsat.G19543.T10 vs. NCBI nr
Match: XP_011648754.1 (auxin-responsive protein IAA16 [Cucumis sativus] >KGN60808.1 hypothetical protein Csa_019407 [Cucumis sativus])

HSP 1 Score: 439 bits (1128), Expect = 1.02e-154
Identity = 222/224 (99.11%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSSLAGKRGFMETVDLKLNLASSMASA 60
           MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSS AGKRGFMETVDLKLNLASSMAS 
Sbjct: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSSSAGKRGFMETVDLKLNLASSMAST 60

Query: 61  KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF 120
           KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF
Sbjct: 61  KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF 120

Query: 121 VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN 180
           VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN
Sbjct: 121 VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN 180

Query: 181 GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL
Sbjct: 181 GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224

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BLAST of Cucsat.G19543.T10 vs. NCBI nr
Match: XP_008455992.1 (PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis melo])

HSP 1 Score: 421 bits (1081), Expect = 1.20e-147
Identity = 217/233 (93.13%), Postives = 222/233 (95.28%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGG-KSSLAGKRGFMETVDLKLNLASSMAS 60
           MESG+NDEY AILINFEQTELRLGLPGGDGGGG KSS AGKRGFMETVDLKLNLASSMAS
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGGGGGKSSSAGKRGFMETVDLKLNLASSMAS 60

Query: 61  AKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGS 120
           AKEE TNLEEIK+ SQQPNDFAKPPSK QVVGWPPVRSSRKNLGV SSRKGGDEGG  GS
Sbjct: 61  AKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGG--GS 120

Query: 121 FVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLL 180
           FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFTIGKCESEGMKDFMNESKSVDLL
Sbjct: 121 FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSVDLL 180

Query: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSSSTV 232
           NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSS ST+
Sbjct: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSPSTI 231

[Close]

BLAST of Cucsat.G19543.T10 vs. NCBI nr
Match: XP_008455985.1 (PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis melo])

HSP 1 Score: 410 bits (1054), Expect = 1.87e-143
Identity = 211/225 (93.78%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGG-KSSLAGKRGFMETVDLKLNLASSMAS 60
           MESG+NDEY AILINFEQTELRLGLPGGDGGGG KSS AGKRGFMETVDLKLNLASSMAS
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGGGGGKSSSAGKRGFMETVDLKLNLASSMAS 60

Query: 61  AKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGS 120
           AKEE TNLEEIK+ SQQPNDFAKPPSK QVVGWPPVRSSRKNLGV SSRKGGDEGG  GS
Sbjct: 61  AKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGG--GS 120

Query: 121 FVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLL 180
           FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFTIGKCESEGMKDFMNESKSVDLL
Sbjct: 121 FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSVDLL 180

Query: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL
Sbjct: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 223

[Close]

BLAST of Cucsat.G19543.T10 vs. NCBI nr
Match: XP_022946130.1 (auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 386 bits (991), Expect = 7.17e-134
Identity = 203/237 (85.65%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSLAGKRGFMETVDLKLNLASSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSS A KRGFMETVDLKLNL+SSM
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60

Query: 61  ASAKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120

Query: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIG-KCESEGMKDFMNESKS 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G  CESEGMKDFMNE K 
Sbjct: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGGTCESEGMKDFMNERKL 180

Query: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSSSTV 232
           VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLGKS  S V
Sbjct: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLGKSHKSLV 235

[Close]

BLAST of Cucsat.G19543.T10 vs. NCBI nr
Match: KAG6599310.1 (Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 385 bits (989), Expect = 1.67e-133
Identity = 200/229 (87.34%), Postives = 210/229 (91.70%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSLAGKRGFMETVDLKLNLASSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSS A KRGFMETVDLKLNL+SSM
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60

Query: 61  ASAKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120

Query: 121 G--SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKS 180
           G  SFVKVSMDGAPYLRKVDLKLY+SYK+LSHALA+MFSSFTIG CESEGMKDFMNE K 
Sbjct: 121 GGASFVKVSMDGAPYLRKVDLKLYSSYKDLSHALAKMFSSFTIGTCESEGMKDFMNERKL 180

Query: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGL
Sbjct: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGL 227

[Close]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL
Match: A0A0A0LG78 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G010920 PE=3 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 4.94e-155
Identity = 222/224 (99.11%), Postives = 222/224 (99.11%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSSLAGKRGFMETVDLKLNLASSMASA 60
           MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSS AGKRGFMETVDLKLNLASSMAS 
Sbjct: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGGKSSSAGKRGFMETVDLKLNLASSMAST 60

Query: 61  KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF 120
           KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF
Sbjct: 61  KEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGSF 120

Query: 121 VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN 180
           VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN
Sbjct: 121 VKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLLN 180

Query: 181 GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL
Sbjct: 181 GSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224

[Close]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL
Match: A0A1S3C1R6 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 5.80e-148
Identity = 217/233 (93.13%), Postives = 222/233 (95.28%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGG-KSSLAGKRGFMETVDLKLNLASSMAS 60
           MESG+NDEY AILINFEQTELRLGLPGGDGGGG KSS AGKRGFMETVDLKLNLASSMAS
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGGGGGKSSSAGKRGFMETVDLKLNLASSMAS 60

Query: 61  AKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGS 120
           AKEE TNLEEIK+ SQQPNDFAKPPSK QVVGWPPVRSSRKNLGV SSRKGGDEGG  GS
Sbjct: 61  AKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGG--GS 120

Query: 121 FVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLL 180
           FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFTIGKCESEGMKDFMNESKSVDLL
Sbjct: 121 FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSVDLL 180

Query: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSSSTV 232
           NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSS ST+
Sbjct: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSPSTI 231

[Close]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL
Match: A0A1S3C1R1 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1)

HSP 1 Score: 410 bits (1054), Expect = 9.05e-144
Identity = 211/225 (93.78%), Postives = 215/225 (95.56%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGGGG-KSSLAGKRGFMETVDLKLNLASSMAS 60
           MESG+NDEY AILINFEQTELRLGLPGGDGGGG KSS AGKRGFMETVDLKLNLASSMAS
Sbjct: 1   MESGKNDEYSAILINFEQTELRLGLPGGDGGGGGKSSSAGKRGFMETVDLKLNLASSMAS 60

Query: 61  AKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAGGS 120
           AKEE TNLEEIK+ SQQPNDFAKPPSK QVVGWPPVRSSRKNLGV SSRKGGDEGG  GS
Sbjct: 61  AKEEGTNLEEIKSCSQQPNDFAKPPSKTQVVGWPPVRSSRKNLGVSSSRKGGDEGG--GS 120

Query: 121 FVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSVDLL 180
           FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFTIGKCESEGMKDFMNESKSVDLL
Sbjct: 121 FVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTIGKCESEGMKDFMNESKSVDLL 180

Query: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL
Sbjct: 181 NGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 223

[Close]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL
Match: A0A6J1G2X6 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1)

HSP 1 Score: 386 bits (991), Expect = 3.47e-134
Identity = 203/237 (85.65%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSLAGKRGFMETVDLKLNLASSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSS A KRGFMETVDLKLNL+SSM
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60

Query: 61  ASAKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120

Query: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIG-KCESEGMKDFMNESKS 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G  CESEGMKDFMNE K 
Sbjct: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGGTCESEGMKDFMNERKL 180

Query: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGLGKSSSSTV 232
           VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGLGKS  S V
Sbjct: 181 VDLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGLGKSHKSLV 235

[Close]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL
Match: A0A6J1G2X5 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1)

HSP 1 Score: 384 bits (985), Expect = 3.17e-133
Identity = 198/228 (86.84%), Postives = 209/228 (91.67%), Query Frame = 0


Query: 1   MESGQNDEYRAILINFEQTELRLGLPGGDGG---GGKSSLAGKRGFMETVDLKLNLASSM 60
           MES QNDEYRAILINFEQTELRLGLPGGDGG   GGKSS A KRGFMETVDLKLNL+SSM
Sbjct: 1   MESEQNDEYRAILINFEQTELRLGLPGGDGGDTSGGKSSSAAKRGFMETVDLKLNLSSSM 60

Query: 61  ASAKEEATNLEEIKTSSQQPNDFAKPPSKAQVVGWPPVRSSRKNLGVVSSRKGGDEGGAG 120
           A  KEEATNLEE K+SSQ+PNDFAKPPSKAQVVGWPPVRSSRKNLG  + R GG++GG G
Sbjct: 61  APEKEEATNLEETKSSSQRPNDFAKPPSKAQVVGWPPVRSSRKNLG--AQRTGGEDGGGG 120

Query: 121 G-SFVKVSMDGAPYLRKVDLKLYASYKELSHALAQMFSSFTIGKCESEGMKDFMNESKSV 180
           G +FVKVSMDGAPYLRKVDLKLY SYK+LSHALA+MFSSFT+G CESEGMKDFMNE K V
Sbjct: 121 GGAFVKVSMDGAPYLRKVDLKLYGSYKDLSHALAKMFSSFTVGTCESEGMKDFMNERKLV 180

Query: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESDAIGL 224
           DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKES+AIGL
Sbjct: 181 DLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKESEAIGL 226

The following BLAST results are available for this feature:

BLAST of Cucsat.G19543.T10 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24407	7.5e-68	62.98	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
P13089	4.1e-66	61.64	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]
Q38832	2.2e-64	62.44	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
Q38825	8.5e-64	59.57	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]
P93830	2.1e-62	61.19	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]

BLAST of Cucsat.G19543.T10 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648754.1	1.02e-154	99.11	auxin-responsive protein IAA16 [Cucumis sativus] >KGN60808.1 hypothetical protei...	[more]
XP_008455992.1	1.20e-147	93.13	PREDICTED: auxin-responsive protein IAA16 isoform X2 [Cucumis melo]	[more]
XP_008455985.1	1.87e-143	93.78	PREDICTED: auxin-responsive protein IAA16 isoform X1 [Cucumis melo]	[more]
XP_022946130.1	7.17e-134	85.65	auxin-responsive protein IAA16-like isoform X2 [Cucurbita moschata]	[more]
KAG6599310.1	1.67e-133	87.34	Auxin-responsive protein IAA16, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G19543.T10 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG78	4.94e-155	99.11	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_2G010920 PE=3 SV=1	[more]
A0A1S3C1R6	5.80e-148	93.13	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1	[more]
A0A1S3C1R1	9.05e-144	93.78	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103496046 PE=3 SV=1	[more]
A0A6J1G2X6	3.47e-134	85.65	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1	[more]
A0A6J1G2X5	3.17e-133	86.84	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111450302 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 38..225 e-value: 2.6E-76 score: 256.7
None	No IPR available	GENE3D	3.10.20.90		coord: 113..231 e-value: 2.3E-44 score: 151.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..93
None	No IPR available	PANTHER	PTHR31734:SF113	AUXIN-INDUCED PROTEIN AUX28	coord: 6..228
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 117..217
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 6..228
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 118..220 score: 25.783165

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G19543	Cucsat.G19543	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19543.T10.E1	Cucsat.G19543.T10.E1	exon
Cucsat.G19543.T10.E2	Cucsat.G19543.T10.E2	exon
Cucsat.G19543.T10.E3	Cucsat.G19543.T10.E3	exon
Cucsat.G19543.T10.E4	Cucsat.G19543.T10.E4	exon
Cucsat.G19543.T10.E5	Cucsat.G19543.T10.E5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19543.T10.C4	Cucsat.G19543.T10.C4	CDS
Cucsat.G19543.T10.C3	Cucsat.G19543.T10.C3	CDS
Cucsat.G19543.T10.C2	Cucsat.G19543.T10.C2	CDS
Cucsat.G19543.T10.C1	Cucsat.G19543.T10.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G19543.T10	Cucsat.G19543.T10-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding