Cucsat.G19511.T19 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GATCTTTACTTAAAATCATTCAATAAGATATGTGAATTTAAAGATCTAGACGTTTCATGATAATATCATTTGATAGACATTCACGATACTTTGTTTTACGATTTCTCTTTGTTACATCCAACCACGCACCTCAACACTAATAATTTCTTCCATCACCACCTCCCCTAGAAGAGGAAAGGAAAGGAAAACACACAAGGGTTTCTTTTCCTCTATTTCTTTAATGCAGATCCGACATTGAAATTGTTAAATGGTCCATTCATTAGCATCATTTTAACCTACATTTCTTCATTTCTTCATTTCCAAGGCTTGTATTGTATTACCATATATATATATAAACATTTCAAGTATTTCTTTTCATCACTCTTCATATTCTTCCTTTCTTTACACTCTGTCTGCTTCCCTTTATTAATGGCCAGCAAGTAGCTCTGAAATCGCTTGAAGTTTCATGGCTTCTTCCTCTTCTTCTTCTGTCTTTGGTTATTTCGCCATTTGAGAAAGTTTTTAGAAATGGGTTTTCGTTTTTGGCTTCTGCGGTTTTGTTTTTGGGTCTGTTTCTTCTTTCTCTGTTGTGGTTCAGTGAACTCAGAAGGGTTTTTGAGAGGGAGGGTTTTGATTGACGGCAAATCCGCCATTGGACGTATTGATGAAGACTTTGTTTGTGCTACGCTCGATTGGTGGCCTCCTGAGAAATGCGATTACGGAACTTGCAGTTGGGGCCAAGCTTCTCTGTTGAATCTGGTATTTGTTTTTTCTTTTCTTTCTTTTAGATTCTAATCATTTCCAAACTCATTAATGGCGATTTACTTTTCTTATGAATTACGAGAGTTCATAAATTTTGGCATCTGGGTTTCATTATTTGATATTCTTCTTTAAGTTTTCTTTATGGGTTTTTAGAGTATTTATTGCTAAAGAAAAGTGAGAATCCTTTCATCTTTTCGAACAGTCTCACTCCTCAGTTATGCATTTGGAAGATAACAAAACAAAGAAAACTCGACATTAATTGGTTTGGAGGAGATATCAAAACAAAGAAAGTTCGAAGATTAATTTTGAGTATAACTATTGGTTAGAAAATTGAACCTCTAATCTCTATCTAACAGGAGGTCATGTCAATACTACTAAATAGAGTTCATTCCGGCAAAAACTCGAAAATCAATTAAATTTCAAAAGTCTCTTAAATTATACATTTCGTTTACTTAGGTCTCGTTTGGAAAGTAGATAGCAGAAAGAAAAAAAAAAAAACCCCAATTAATTGGATTTTAAATTTGGAAGTATGTTTACAATTATTTAATGTCTTTTCTACTAGGTTCTATTGACTAAAGAATAATAATAGTTATGAGGTCACATCTACTATTAAATATACTTTCCTATAATCTATCTAGTGCTATACTATCTGAAATATTTAAATTTGTTCTGATTTCATTTTCAACTGCAGGACCTGGGCAACAACATTCTATTAAATGCAGTCAAAGGTTTGAATTCCTTTAGCTCCTGGACTGTTTTGGCTTACAGTTTTAATGAATCTAGCTTTATAAAGAAGTAAGAAAGTCTTTATGATCTGCAAAAGAATGAAATAAACCCTAGGCTTATCTAATCTATGATGATTTGTTGAAGCTAATATTTAATATCTATTATAAAAGATAGGTTTCATAGGTTCAATTTATGTGTCCAAACATAGGTTTATATCATACCTCAAGTAATTCAACGTTTTAGGGGAGAAAGATCAAAAAAGTGTTAAGAGTTGTAGAACGGAACCTTAAAGTTTGGTCCTCGGTGAGATTTCATGTTTCTTTTTTATACTTCGATTTTGAGGACTTTTTCTAATTACTCTCTAGGCAACATCATACGTAGTTGAACCTCCTTTTTCTAGTGGGGTTTTTGTGGGCTCTTCTTTCATTTTTTTTTTTTCCTGAATGAAAGAAGTTGTTTCTATTCGGGAAAAAATCATTCTACCTATGAAGTATTCTCTATATATTTGAATGTGAAAGTTAAAACTAATGTCTCTTCATGAATGGCGCAGAATTTAAACCCCTAAAGCTTAGATTGGGTGGTACTTTGCAAGATAAGATCATATATGATACTGAAGATCACCAGGAGCCATGCATTTATCTTTCAAAAAACACCTCAGAGTTATTTGGGTTCAGTCAAGGCTGCTTGCCTACTAACAGATGGGACCAACTAAATGACTTCTTCAAGAAAGGAGGGTAATAAAAAATTCATCCCATTTTCCTCGTATGAAGTTAGATTTCTCAAAAGTTGAATGCTAAAGTTGTGTAATCTTATTCAGAGCTAAGATTATCTTCGGATTAAATGCTCTCAATGGACGACAAATTGCAGCAAATGGGTGTTCTGTTGGAGCTTGGAATTACACAAATGCTGAAATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGTAAGAATTGCCAATTGTTTTCCTAATGAACAATTCAAAACCCCGAGATATGTTGGTCTACAACAATGAATTTTGGAGAGTAATTGTTCTTGTTATTTGATTTTTTCTTATGCTCAGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGTATCATTCATTGGCCTAGTAATACTTACATGAAGTTTCGAAAAGCAGGTAGACATTGAAGCCTTTTCTTATTAACAGGAGTCGATGAGCATCTTGTTGAAAAGATTCTTGATCCGTCCTATCTTGATGGCATGGTTGATACATTTAACAAGCTCCATGAGATCCTCAAAAACTCTCCAACTTCAGCTAAAGCGTGGGTTGGGGAATCAGGAGGGGCTTACAACAGTGGCCATAACCTGGTCACAAATGCATTCGTCTTTAGTTTCTGGTAATTTAGACTGTGAAAGACATTCATATTTGGTTCTTTCAAGACATCCATTACAAATAGAACTCTCTCATTGATGTGTAATTTATTCAGGTACTTGGACCAGCTCGGTATGGCAGCTGCTTATGATACAAAAACATACTGCAGGCAGACTTTGATTGGTGGAAACTACGGCTTACTAAACACGACAACCTTTGAACCGAATCCAGACTATTACAGGTGAAAGATTAGGTCAATATTTCTGACCTACTCCACTGCTATTAGACAATTATCTAACAATCAGCTTGCTTGTTTTTTGTTTCTTTCTTCGTTTCAGTGCACTCTTATGGCATCGCTTGATGGGAAGAAATGTTCTGTCCACGGGCTTTAATGGGACAGAGAAAATACGAGCCTATGCACATTGTTCTAAGCAATCTGTAAGTAGCAGTATATACCATGACAACCTTAAATTTGGTTTTTCTGCCTATTGCTTAAGTAAATGAAATAAACAGCTGAAAGCTAAAACTAGAAATAAAGAAATGCCACCAGTTTCTCAACTCTGATTTAACTCTCAATCTTACAGAAAGGAATCACATTACTATTGCTCAACCTAGATGGTAACAATACAGTTCATGCTGGGATTGCATTCAACAGAACTACAGCGTTGCACCATAAACACAGATCCAATAAGCATAAATCAAATATTGTTCGGATACCTCGACCTCGTGGTCTTGAAGGCGAAGCCTTCAGAGAGGAATATCATTTAACAGCCAAGGATGGAAACCTGCATAGTCAAACAGTGCTGCTAAATGGAAACATTTTGTCTGTAAATTCATCAGGGAACATACCTCCATTGGAACCTCAGCATGTAAATTCATCTGAACCAATAATGGTGGCTCCCTTTTCAATTGTATTCATTCACATACCAAATATCATTCTCCCTGCTTGCAGATAGGATAGGTTGAATGTATGGAACTGAAAATCGGTTCCAGATTGGTTATTTTCTAATAAGAGAAAACAATTGTAACATTTGGTTCATTTTTTTCAAGGTGAAAAAATAGCAAGAGTCTCTTTGAATCAACATTGACCGACGGAAAATCAATCCGTGGATGTAAGTAGCACCATAAGCAGAAGATGCAAATTTTACAGAATATATGCAACTTTCGCAGGATCACTCTGACTAACAATGAGAAAACAAAATCTCTACATGATCAGTAATACTGCTTCTTTGTGGGGAATTATACATGTATTCACTACAGATATACACAACTGAAGAACCTGATATGAAATGCAGTTGATGGATCGTATTGGAGTTCTCAGCAAATTCGTGTAATCTAACACTAATCATTCTTTGAAAAGTTTTTAGGTTTACTGCTGGCGAAGACCAACCAAACAATTGTCCCAGTTAAGTAGAAGAAGATTGATGGGGCAAACAATGAGATCTACACATAGAAAACAGGAAATTTTGAAAATGGGAAAGAAGTCAGAGGATATCAATGAAATATATCAAATGTTAAAGAAAAGGAGAAAATTGTCAACTTACACTCCAAGAATGAGTTGAATCGAGAAGAAAGCCAGTGAGAGCAACTCCTACAATGCCAGGTATTGCTCCAACGGTATTTGTAATGCCCTGAGGAGAATTGGCGAAGCTTGCTAAAATAAACCACATGAAATATTAAGAATATTGAAATGAACAGGGGTATTATAGAGCTTCAGCTTACATACCAAAAGAACACTTGCATATTCAGGTGAAATATCTTGATGAGTACAGTAGAGTCCTGCAGAAAACAGATAAAGATTTTGGTACCTTAAAGGAAATAGGAGACTTTGGTCCAATAACTTCGAAAAAGAATGTTTCAAGAATTGAAGTATCTTTGATGTAGATTTTACCTGATAATGCAAAACTAGAGAGGGCCAAGCCACTGGTTAGAATTCCTACTACCTCCCAAGGTGGCAATCCTAAATCAACAGAGGACAAAGTCATGCAAACTGCTGGGGACACAAAGGCAACTGTTTGGCAAATCTTTCTTACCTACATAAGGAAAACAGAAGAGGATTAAACAAATTATGAATGGAATGCTTCTTGAAAACAAACTGTTGGAGATCGTCTTTCCATACTTTTGTGGTATCGACACCATTGGAAATCAGGTTATCAGCTAACTGTGATGCAATGCTTGTCACAAAAATTGAAGCCAGGGGTGGCAGGATGGAAACCTGAATTGAATTATTTCTAGGAGTCATAAGAAAGTTGACGCATTACACAACCACACGGTTGCAATCAGGTAATAAAATAATGACGCGAAAATGAAGAAAAATGAGAATAGAAAAAGAGAGGTACCC ATGGGTTTTCGTTTTTGGCTTCTGCGGTTTTGTTTTTGGGTCTGTTTCTTCTTTCTCTGTTGTGGTTCAGTGAACTCAGAAGGGTTTTTGAGAGGGAGGGTTTTGATTGACGGCAAATCCGCCATTGGACGTATTGATGAAGACTTTGTTTGTGCTACGCTCGATTGGTGGCCTCCTGAGAAATGCGATTACGGAACTTGCAGTTGGGGCCAAGCTTCTCTGTTGAATCTGGACCTGGGCAACAACATTCTATTAAATGCAGTCAAAGAATTTAAACCCCTAAAGCTTAGATTGGGTGGTACTTTGCAAGATAAGATCATATATGATACTGAAGATCACCAGGAGCCATGCATTTATCTTTCAAAAAACACCTCAGAGTTATTTGGGTTCAGTCAAGGCTGCTTGCCTACTAACAGATGGGACCAACTAAATGACTTCTTCAAGAAAGGAGGAGCTAAGATTATCTTCGGATTAAATGCTCTCAATGGACGACAAATTGCAGCAAATGGGTGTTCTGTTGGAGCTTGGAATTACACAAATGCTGAAATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGAGTCGATGAGCATCTTGTTGAAAAGATTCTTGATCCGTCCTATCTTGATGGCATGGTTGATACATTTAACAAGCTCCATGAGATCCTCAAAAACTCTCCAACTTCAGCTAAAGCGTGGGTTGGGGAATCAGGAGGGGCTTACAACAGTGGCCATAACCTGGTCACAAATGCATTCGTCTTTAGTTTCTGGTAA MGFRFWLLRFCFWVCFFFLCCGSVNSEGFLRGRVLIDGKSAIGRIDEDFVCATLDWWPPEKCDYGTCSWGQASLLNLDLGNNILLNAVKEFKPLKLRLGGTLQDKIIYDTEDHQEPCIYLSKNTSELFGFSQGCLPTNRWDQLNDFFKKGGAKIIFGLNALNGRQIAANGCSVGAWNYTNAEMLIRYTVKKNYTIHGWELGNELSGNGVGTRILAEQYASDTIVLQNMVQSIYKDIEPKPLIIAPGGFFDENWFKEFVGKTTPSLDVVTHHIYNLGPGVDEHLVEKILDPSYLDGMVDTFNKLHEILKNSPTSAKAWVGESGGAYNSGHNLVTNAFVFSFW Homology
BLAST of Cucsat.G19511.T19 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2) HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-127 Identity = 210/341 (61.58%), Postives = 261/341 (76.54%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 9.5e-96 Identity = 154/312 (49.36%), Postives = 211/312 (67.63%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 3.0e-89 Identity = 158/343 (46.06%), Postives = 219/343 (63.85%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy Swiss-Prot
Match: Q9LRC8 (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 3.2e-83 Identity = 155/356 (43.54%), Postives = 216/356 (60.67%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy Swiss-Prot
Match: X4Y2L4 (Hyaluronoglucuronidase OS=Hirudo nipponia OX=42736 PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.7e-15 Identity = 80/322 (24.84%), Postives = 130/322 (40.37%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. NCBI nr
Match: XP_004139281.1 (heparanase-like protein 3 [Cucumis sativus] >KAE8651538.1 hypothetical protein Csa_019474 [Cucumis sativus]) HSP 1 Score: 721 bits (1860), Expect = 1.59e-259 Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. NCBI nr
Match: XP_008457259.1 (PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 3 [Cucumis melo]) HSP 1 Score: 700 bits (1807), Expect = 1.79e-251 Identity = 326/341 (95.60%), Postives = 336/341 (98.53%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. NCBI nr
Match: XP_038891040.1 (heparanase-like protein 3 isoform X1 [Benincasa hispida]) HSP 1 Score: 661 bits (1705), Expect = 6.18e-236 Identity = 312/341 (91.50%), Postives = 326/341 (95.60%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. NCBI nr
Match: KAA0063515.1 (heparanase-like protein 3 [Cucumis melo var. makuwa] >TYJ97842.1 heparanase-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 640 bits (1651), Expect = 1.30e-227 Identity = 306/342 (89.47%), Postives = 315/342 (92.11%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. NCBI nr
Match: XP_023537510.1 (heparanase-like protein 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537511.1 heparanase-like protein 3 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 634 bits (1634), Expect = 5.00e-225 Identity = 298/348 (85.63%), Postives = 322/348 (92.53%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy TrEMBL
Match: A0A1S3C565 (LOW QUALITY PROTEIN: heparanase-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103496979 PE=3 SV=1) HSP 1 Score: 700 bits (1807), Expect = 8.67e-252 Identity = 326/341 (95.60%), Postives = 336/341 (98.53%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy TrEMBL
Match: A0A5A7VC89 (Heparanase-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00540 PE=3 SV=1) HSP 1 Score: 640 bits (1651), Expect = 6.29e-228 Identity = 306/342 (89.47%), Postives = 315/342 (92.11%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy TrEMBL
Match: A0A6J1HPC5 (heparanase-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111465495 PE=3 SV=1) HSP 1 Score: 630 bits (1624), Expect = 7.49e-224 Identity = 296/348 (85.06%), Postives = 321/348 (92.24%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy TrEMBL
Match: A0A6J1FD96 (heparanase-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111444334 PE=3 SV=1) HSP 1 Score: 625 bits (1613), Expect = 3.78e-222 Identity = 293/348 (84.20%), Postives = 319/348 (91.67%), Query Frame = 0
BLAST of Cucsat.G19511.T19 vs. ExPASy TrEMBL
Match: A0A6J1CML0 (heparanase-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111013018 PE=3 SV=1) HSP 1 Score: 602 bits (1552), Expect = 5.18e-213 Identity = 285/340 (83.82%), Postives = 309/340 (90.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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