Cucsat.G19511.T12 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACTATACATCGATCTTTACTTAAAATCATTCAATAAGATATGTGAATTTAAAGATCTAGACGTTTCATGATAATATCATTTGATAGACATTCACGATACTTTGTTTTACGATTTCTCTTTGTTACATCCAACCACGCACCTCAACACTAATAATTTCTTCCATCACCACCTCCCCTAGAAGAGGAAAGGAAAGGAAAACACACAAGGGTTTCTTTTCCTCTATTTCTTTAATGCAGATCCGACATTGAAATTGTTAAATGGTCCATTCATTAGCATCATTTTAACCTACATTTCTTCATTTCTTCATTTCCAAGGCTTGTATTGTATTACCATATATATATATAAACATTTCAAGTATTTCTTTTCATCACTCTTCATATTCTTCCTTTCTTTACACTCTGTCTGCTTCCCTTTATTAATGGCCAGCAAGTAGCTCTGAAATCGCTTGAAGTTTCATGGCTTCTTCCTCTTCTTCTTCTGTCTTTGGTTATTTCGCCATTTGAGAAAGTTTTTAGAAATGGGTTTTCGTTTTTGGCTTCTGCGGTTTTGTTTTTGGGTCTGTTTCTTCTTTCTCTGTTGTGGTTCAGTGAACTCAGAAGGGTTTTTGAGAGGGAGGGTTTTGATTGACGGCAAATCCGCCATTGGACGTATTGATGAAGACTTTGTTTGTGCTACGCTCGATTGGTGGCCTCCTGAGAAATGCGATTACGGAACTTGCAGTTGGGGCCAAGCTTCTCTGTTGAATCTGGTATTTGTTTTTTCTTTTCTTTCTTTTAGATTCTAATCATTTCCAAACTCATTAATGGCGATTTACTTTTCTTATGAATTACGAGAGTTCATAAATTTTGGCATCTGGGTTTCATTATTTGATATTCTTCTTTAAGTTTTCTTTATGGGTTTTTAGAGTATTTATTGCTAAAGAAAAGTGAGAATCCTTTCATCTTTTCGAACAGTCTCACTCCTCAGTTATGCATTTGGAAGATAACAAAACAAAGAAAACTCGACATTAATTGGTTTGGAGGAGATATCAAAACAAAGAAAGTTCGAAGATTAATTTTGAGTATAACTATTGGTTAGAAAATTGAACCTCTAATCTCTATCTAACAGGAGGTCATGTCAATACTACTAAATAGAGTTCATTCCGGCAAAAACTCGAAAATCAATTAAATTTCAAAAGTCTCTTAAATTATACATTTCGTTTACTTAGGTCTCGTTTGGAAAGTAGATAGCAGAAAGAAAAAAAAAAAAACCCCAATTAATTGGATTTTAAATTTGGAAGTATGTTTACAATTATTTAATGTCTTTTCTACTAGGTTCTATTGACTAAAGAATAATAATAGTTATGAGGTCACATCTACTATTAAATATACTTTCCTATAATCTATCTAGTGCTATACTATCTGAAATATTTAAATTTGTTCTGATTTCATTTTCAACTGCAGGACCTGGGCAACAACATTCTATTAAATGCAGTCAAAGGTTTGAATTCCTTTAGCTCCTGGACTGTTTTGGCTTACAGTTTTAATGAATCTAGCTTTATAAAGAAGTAAGAAAGTCTTTATGATCTGCAAAAGAATGAAATAAACCCTAGGCTTATCTAATCTATGATGATTTGTTGAAGCTAATATTTAATATCTATTATAAAAGATAGGTTTCATAGGTTCAATTTATGTGTCCAAACATAGGTTTATATCATACCTCAAGTAATTCAACGTTTTAGGGGAGAAAGATCAAAAAAGTGTTAAGAGTTGTAGAACGGAACCTTAAAGTTTGGTCCTCGGTGAGATTTCATGTTTCTTTTTTATACTTCGATTTTGAGGACTTTTTCTAATTACTCTCTAGGCAACATCATACGTAGTTGAACCTCCTTTTTCTAGTGGGGTTTTTGTGGGCTCTTCTTTCATTTTTTTTTTTTCCTGAATGAAAGAAGTTGTTTCTATTCGGGAAAAAATCATTCTACCTATGAAGTATTCTCTATATATTTGAATGTGAAAGTTAAAACTAATGTCTCTTCATGAATGGCGCAGAATTTAAACCCCTAAAGCTTAGATTGGGTGGTACTTTGCAAGATAAGATCATATATGATACTGAAGATCACCAGGAGCCATGCATTTATCTTTCAAAAAACACCTCAGAGTTATTTGGGTTCAGTCAAGGCTGCTTGCCTACTAACAGATGGGACCAACTAAATGACTTCTTCAAGAAAGGAGGGTAATAAAAAATTCATCCCATTTTCCTCGTATGAAGTTAGATTTCTCAAAAGTTGAATGCTAAAGTTGTGTAATCTTATTCAGAGCTAAGATTATCTTCGGATTAAATGCTCTCAATGGACGACAAATTGCAGCAAATGGGTGTTCTGTTGGAGCTTGGAATTACACAAATGCTGAAATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGTAAGAATTGCCAATTGTTTTCCTAATGAACAATTCAAAACCCCGAGATATGTTGGTCTACAACAATGAATTTTGGAGAGTAATTGTTCTTGTTATTTGATTTTTTCTTATGCTCAGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGTATCATTCATTGGCCTAGTAATACTTACATGAAGTTTCGAAAAGCAGGTAGACATTGAAGCCTTTTCTTATTAACAGGAGTCGATGAGCATCTTGTTGAAAAGATTCTTGATCCGTCCTATCTTGATGGCATGGTTGATACATTTAACAAGCTCCATGAGATCCTCAAAAACTCTCCAACTTCAGCTAAAGCGTGGGTTGGGGAATCAGGAGGGGCTTACAACAGTGGCCATAACCTGGTCACAAATGCATTCGTCTTTAGTTTCTGGTAATTTAGACTGTGAAAGACATTCATATTTGGTTCTTTCAAGACATCCATTACAAATAGAACTCTCTCATTGATGTGTAATTTATTCAGGTACTTGGACCAGCTCGGTATGGCAGCTGCTTATGATACAAAAACATACTGCAGGCAGACTTTGATTGGTGGAAACTACGGCTTACTAAACACGACAACCTTTGAACCGAATCCAGACTATTACAGGTGAAAGATTAGGTCAATATTTCTGACCTACTCCACTGCTATTAGACAATTATCTAACAATCAGCTTGCTTGTTTTTTGTTTCTTTCTTCGTTTCAGTGCACTCTTATGGCATCGCTTGATGGGAAGAAATGTTCTGTCCACGGGCTTTAATGGGACAGAGAAAATACGAGCCTATGCACATTGTTCTAAGCAATCTGTAAGTAGCAGTATATACCATGACAACCTTAAATTTGGTTTTTCTGCCTATTGCTTAAGTAAATGAAATAAACAGCTGAAAGCTAAAACTAGAAATAAAGAAATGCCACCAGTTTCTCAACTCTGATTTAACTCTCAATCTTACAGAAAGGAATCACATTACTATTGCTCAACCTAGATGGTAACAATACAGTTCATGCTGGGATTGCATTCAACAGAACTACAGCGTTGCACCATAAACACAGATCCAATAAGCATAAATCAAATATTGTTCGGATACCTCGACCTCGTGGTCTTGAAGGCGAAGCCTTCAGAGAGGAATATCATTTAACAGCCAAGGATGGAAACCTGCATAGTCAAACAGTGCTGCTAAATGGAAACATTTTGTCTGTAAATTCATCAGGGAACATACCTCCATTGGAACCTCAGCATGTAAATTCATCTGAACCAATAATGGTGGCTCCCTTTTCAATTGTATTCATTCACATACCAAATATCATTCTCCCTGCTTGCAGATAGGATAGGTTGAATGTATGGAACTGAAAATCGGTTCCAGATTGGTTATTTTCTAATAAGAGAAAACAATTGTAACATTTGGTTCATTTTTTTCAAGGTGAAAAAATAGCAAGAGTCTCTTTGAATCAACATTGACCGACGGAAAATCAATCCGTGGATGTAAGTAGCACCATAAGCAGAAGATGCAAATTTTACAGAATATATGCAACTTTCGCAGGATCACTCTGACTAACAATGAGAAAACAAAATCTCTACATGATCAGTAATACTGCTTCTTTGTGGGGAATTATACATGTATTCACTACAGATATACACAACTGAAGAACCTGATATGAAATGCAGTTGATGGATCGTATTGGAGTTCTCAGCAAATTCGTGTAATCTAACACTAATCATTCTTTGAAAAGTTTTTAGGTTTACTGCTGGCGAAGACCAACCAAACAATTGTCCCAGTTAAGTAGAAGAAGATTGATGGGGCAAACAATGAGATCTACACATAGAAAACAGGAAATTTTGAAAATGGGAAAGAAGTCAGAGGATATCAATGAAATATATCAAATGTTAAAGAAAAGGAGAAAATTGTCAACTTACACTCCAAGAATGAGTTGAATCGAGAAGAAAGCCAGTGAGAGCAACTCCTACAATGCCAGGTATTGCTCCAACGGTATTTGTAATGCCCTGAGGAGAATTGGCGAAGCTTGCTAAAATAAACCACATGAAATATTAAGAATATTGAAATGAACAGGGGTATTATAGAGCTTCAGCTTACATACCAAAAGAACACTTGCATATTCAGGTGAAATATCTTGATGAGTACAGTAGAGTCCTGCAGAAAACAGATAAAGATTTTGGTACCTTAAAGGAAATAGGAGACTTTGGTCCAATAACTTCGAAAAAGAATGTTTCAAGAATTGAAGTATCTTTGATGTAGATTTTACCTGATAATGCAAAACTAGAGAGGGCCAAGCCACTGGTTAGAATTCCTACTACCTCCCAAGGTGGCAATCCTAAATCAACAGAGGACAAAGTCATGCAAACTGCTGGGGACACAAAGGCAACTGTTTGGCAAATCTTTCTTACCTACATAAGGAAAACAGAAGAGGATTAAACAAATTATGAATGGAATGCTTCTTGAAAACAAACTGTTGGAGATCGTCTTTCCATACTTTTGTGGTATCGACACCATTGGAAATCAGGTTATCAGCTAACTGTGATGCAATGCTTGTCACAAAAATTGAAGCCAGGGGTGGCAGGATGGAAACCTGAATTGAATTATTTCTAGGAGTCATAAGAAAGTTGACGCATTACACAACCACACGGTTGCAATCAGGTAATAAAATAATGACGCGAAAATGAAGAAAAATGAGAATAGAAAAAGAGAGGTACCCAAGCAGCTTCAGTCAAATTGAGGTTCAACTCCTCACTGCAAAAAGAATGTGGATGAAGATCCAACTTCAATTTTCCTTTTAAACACAAAGCAAGGAAGCAAGGAAGCAAGGAAGATGACGAGGAAACGAAGATGTGAGGGTACCTAAAATAAGTAGGAAGCCAGGAGAGACAAGTGTAGTGACCCCAACTTCCACAGAAATGAGCATATATCATTGCCCATACGGGTGGATACTCCAAGAACGCCCTCCATGGTACTTCCTAAAAAAAAAGATTTAAAATAAATACATATA ATGTTAATTCGTTATACTGTAAAAAAAAACTACACCATCCATGGTTGGGAGCTTGGAAATGAATTGAGTGGGAATGGAGTTGGGACAAGAATTTTAGCAGAACAGTATGCTTCTGATACAATTGTTCTTCAAAACATGGTCCAAAGTATCTACAAGGATATCGAACCGAAACCATTAATCATAGCACCTGGAGGATTCTTTGATGAAAATTGGTTCAAAGAATTCGTTGGCAAAACTACCCCATCACTAGACGTTGTCACACACCATATATACAATCTAGGACCAGGAGTCGATGAGCATCTTGTTGAAAAGATTCTTGATCCGTCCTATCTTGATGGCATGGTTGATACATTTAACAAGCTCCATGAGATCCTCAAAAACTCTCCAACTTCAGCTAAAGCGTGGGTTGGGGAATCAGGAGGGGCTTACAACAGTGGCCATAACCTGGTCACAAATGCATTCGTCTTTAGTTTCTGGTACTTGGACCAGCTCGGTATGGCAGCTGCTTATGATACAAAAACATACTGCAGGCAGACTTTGATTGGTGGAAACTACGGCTTACTAAACACGACAACCTTTGAACCGAATCCAGACTATTACAGTGCACTCTTATGGCATCGCTTGATGGGAAGAAATGTTCTGTCCACGGGCTTTAATGGGACAGAGAAAATACGAGCCTATGCACATTGTTCTAAGCAATCTAAAGGAATCACATTACTATTGCTCAACCTAGATGGTAACAATACAGTTCATGCTGGGATTGCATTCAACAGAACTACAGCGTTGCACCATAAACACAGATCCAATAAGCATAAATCAAATATTGTTCGGATACCTCGACCTCGTGGTCTTGAAGGCGAAGCCTTCAGAGAGGAATATCATTTAACAGCCAAGGATGGAAACCTGCATAGTCAAACAGTGCTGCTAAATGGAAACATTTTGTCTGTAAATTCATCAGGGAACATACCTCCATTGGAACCTCAGCATGTAAATTCATCTGAACCAATAATGGTGGCTCCCTTTTCAATTGTATTCATTCACATACCAAATATCATTCTCCCTGCTTGCAGATAG MLIRYTVKKNYTIHGWELGNELSGNGVGTRILAEQYASDTIVLQNMVQSIYKDIEPKPLIIAPGGFFDENWFKEFVGKTTPSLDVVTHHIYNLGPGVDEHLVEKILDPSYLDGMVDTFNKLHEILKNSPTSAKAWVGESGGAYNSGHNLVTNAFVFSFWYLDQLGMAAAYDTKTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWHRLMGRNVLSTGFNGTEKIRAYAHCSKQSKGITLLLLNLDGNNTVHAGIAFNRTTALHHKHRSNKHKSNIVRIPRPRGLEGEAFREEYHLTAKDGNLHSQTVLLNGNILSVNSSGNIPPLEPQHVNSSEPIMVAPFSIVFIHIPNIILPACR Homology
BLAST of Cucsat.G19511.T12 vs. ExPASy Swiss-Prot
Match: Q9FZP1 (Heparanase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g34940 PE=2 SV=2) HSP 1 Score: 481.5 bits (1238), Expect = 8.3e-135 Identity = 224/355 (63.10%), Postives = 278/355 (78.31%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy Swiss-Prot
Match: Q8L608 (Heparanase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At5g61250 PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 1.0e-95 Identity = 172/361 (47.65%), Postives = 232/361 (64.27%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy Swiss-Prot
Match: Q9FF10 (Heparanase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At5g07830 PE=2 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 4.2e-94 Identity = 174/362 (48.07%), Postives = 238/362 (65.75%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy Swiss-Prot
Match: Q9LRC8 (Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis OX=65409 GN=SGUS PE=1 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 8.7e-84 Identity = 161/350 (46.00%), Postives = 217/350 (62.00%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy Swiss-Prot
Match: X4Y2L4 (Hyaluronoglucuronidase OS=Hirudo nipponia OX=42736 PE=1 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 8.9e-28 Identity = 103/359 (28.69%), Postives = 155/359 (43.18%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. NCBI nr
Match: XP_004139281.1 (heparanase-like protein 3 [Cucumis sativus] >KAE8651538.1 hypothetical protein Csa_019474 [Cucumis sativus]) HSP 1 Score: 737 bits (1902), Expect = 1.23e-265 Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. NCBI nr
Match: XP_008457259.1 (PREDICTED: LOW QUALITY PROTEIN: heparanase-like protein 3 [Cucumis melo]) HSP 1 Score: 704 bits (1816), Expect = 1.46e-252 Identity = 340/357 (95.24%), Postives = 347/357 (97.20%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. NCBI nr
Match: KAA0063515.1 (heparanase-like protein 3 [Cucumis melo var. makuwa] >TYJ97842.1 heparanase-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 704 bits (1816), Expect = 1.95e-252 Identity = 340/357 (95.24%), Postives = 347/357 (97.20%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. NCBI nr
Match: XP_038891041.1 (heparanase-like protein 3 isoform X2 [Benincasa hispida]) HSP 1 Score: 686 bits (1770), Expect = 4.23e-248 Identity = 328/357 (91.88%), Postives = 343/357 (96.08%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. NCBI nr
Match: XP_038891040.1 (heparanase-like protein 3 isoform X1 [Benincasa hispida]) HSP 1 Score: 686 bits (1770), Expect = 1.52e-245 Identity = 328/357 (91.88%), Postives = 343/357 (96.08%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy TrEMBL
Match: A0A1S3C565 (LOW QUALITY PROTEIN: heparanase-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103496979 PE=3 SV=1) HSP 1 Score: 704 bits (1816), Expect = 7.08e-253 Identity = 340/357 (95.24%), Postives = 347/357 (97.20%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy TrEMBL
Match: A0A5A7VC89 (Heparanase-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00540 PE=3 SV=1) HSP 1 Score: 704 bits (1816), Expect = 9.45e-253 Identity = 340/357 (95.24%), Postives = 347/357 (97.20%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy TrEMBL
Match: A0A6J1HPC5 (heparanase-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111465495 PE=3 SV=1) HSP 1 Score: 660 bits (1704), Expect = 9.68e-236 Identity = 314/355 (88.45%), Postives = 332/355 (93.52%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy TrEMBL
Match: A0A6J1FD96 (heparanase-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111444334 PE=3 SV=1) HSP 1 Score: 659 bits (1701), Expect = 2.97e-235 Identity = 314/357 (87.96%), Postives = 334/357 (93.56%), Query Frame = 0
BLAST of Cucsat.G19511.T12 vs. ExPASy TrEMBL
Match: A0A6J1CML0 (heparanase-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111013018 PE=3 SV=1) HSP 1 Score: 636 bits (1640), Expect = 4.09e-226 Identity = 302/355 (85.07%), Postives = 324/355 (91.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
|