Cucsat.G19485.T7 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACCAACCACCATTGGCGCGCTCTCTGGGTGTGAGCTTCCCTGATTTCATCCATTGATGAAGCATAGAGATCCAAACAAATGAAATCAATTTCACTTTCCCCTCGTCATTTCAACTCTTACAAATCCTTCCACTCCCACAATCCCTTCAATCCACCATCATCTTCTTCAATCTCTTCTTCCACTTCAATTCCTACAATGTCCATCAGTTTAAACTCTCATGCCTTCGCCGGTAACCCCATCAAGTTGAAAACCCCTAAACCCGAAAACCCATTTTCCGCTTCTTCAGCTCTCGAATCTCTCAATTCTCAACTTTTAAACAACACCCACTTCTCTTCTTCCATCAATTTCAAGGTTTTGCCCTTCAAAAAGGGCAAGCCTTTAGCCACTTTCAGTGCTCGGCCTAATGATACCTCCTCTACCTGGCATCTGGGTTGGATTGATTTGACTGATTTCAAGGCTCTGTTTGCTAATTCGACGCTTGAATTGACTGGGGATTTATTTGTCTATTTGGGTTATCTGGATGAAGAGAATTCCGTTTATTGGGGTATTGATGTTTCGAGTGAGGAGGTTTTGGTTTCTGAATTTGCGAGTAAGTCACTCTGTTTTGTGGAGGTTAGAACTCTTATGGTGGCTTCTGATTGGGCTGATGCTCGAGCTATGGGAGAATTGGCTATTGCTGGTCATGTGAGTGCTTCTTGTCGTTACTTGACATCTTTGTGTCGAAGCTGTTATAGTTTCCTATAATGCTAGTTCAACTTTTCATATATATTGTTGACTTTATTTTCTTTATTTGAGTGGAGTGTCAACTGAGTTGCGATGGAAATGTTGAGAATTAATGGAGGTGACTACACATGTCTTAGCTGTGCATTTTAAGGTGTTGAAGTATAGATGTAACTAAATTTACCGTAATTCATGAGCTTAAGCTTTTGGTTTGATCGGTGATTTTGTTGTATGTTTGAATCCCTAAAATATAATTTCCTTTCCAAGCTTGCGAGTGTTTTACTTGACGGGCATTGTTTAAGCTACAAGCGAGGGATGGTGATGAAGTATTAATATAATTAAATTTACTGTAAGTCTGTAACCCATAAGTATAAGTTTTTAGTTGGATGGTGATCTAACCTCAGGCTTGAAAACTTATATGGTCTGTACTTCTTCACATTGCAATGGGGTTTAGTTTTTGTTTCTGTTCTAAGTTTTCATTTTTAGGGAGGCTATGTTGGTTGGGTTGGTGGTAATCAAAGCAATAAGCTAGTGATGTTAAGCTTTCAATAGTTCCTGGAGTCAGCTTGTCCTAGGTGATCTTCAGCATGAAAGCCAATCTGGAACCTACAAACATTTGCTATGTGTGGCCAACTTTCCTTCTGGTTTAGTTTCATTTCTATCTATAAAAAATTATTCAGAAATCAATAAATCAATTTATATGCATAGACTTTAGTAACTAACTTGATTTCTTCAGGTTGTCCTTTTACTCTCTTTCTTAAGTTTTTTAAACTTTGATCAGGCTAGGGCGTTGCTGGAATGGCACAATGTGTCCAAATTTTGTGGACACTGTGGAGGAAAAACAGTACCTGTGGAAGCAGGAAAACGGAAGCAATGTTCTAATCCCTCGTGCAAGAAGAAGGTTTATCCTCGTGTTGATCCGGTATGATTAATATTGCACTTCCTCCCTCCACCCCTCAATGAATTTATCAAATTTGATAGATTCTCTAAGCAAGACATTTTATAGCTCTGATAATAGGTGGTCTATGACAGGTAGTCATTATGCTAGTCATTGATAGAGAAAATGATCGTGCACTCTTGAGTAAGCAATCAAGATTTGTTCCACGAATGTGGAGTTGCCTAGCTGGTTTTATAGAGGTACTTTTCTGATTAATCGTTGAACAATCTTGTAGAAGGTACAATCTCATGGTAGTTAAAATTAATAGTTGATTCTGATGTTTGAGGATTTAGCCTGGAGAAAGCTTAGAAGAAGCAGTAAAAAGAGAAACATGGGAGGAGACAGGCATTGAAGTAGGCGAAGTTGTCTACCATAGTTCTCAGCCTTGGCCTGGTACAACTTAAGAAACGTTGTTTTTCTTTATGTTGCTTCGCTCACGATTTTGCTCTGTTATGTATTATGCTTTAGCCTCTTTACAGCATTTCCCATAAAAGATCAAACATTATTTGTTTATTTGTATGTATTGTTTTTCCTTTAGTTTAAACTTTTGAGCTCCTGTGTTGATTTGTGATTTATCATTTTAAATTTTATTCCAAAGACGCAACAATTTCAACAGTTGGTGCTTTTAACATCAATTTTACAAGTAGTTTTCTTGATAAGATTGTTTAGTTAGTTAGCTCTCTGTCTCTTTTGGTTAGCAAATAATGGAACAAAACTAATATCATCTTCACAACTGAAGGAAAAATCTCTTTTATGATTTCGCTTGCTATTGGTACTTGGTACCATGATTATTCAAAACTCCTACAACACCATCCTTTCAAACACCGTCCGACATTTTAGACAATGATGGACTGGGATGACCAGTTGGTGTTTGTTACTCTCCGTTTTTTTTTCGTCACATTGATACTTCCTTGCAATATGAATTCGTGGTAGTTTCTTATAACTCCCTTGTCCATGAGCAGGTTGATATCTCATCTTTGTCTCCTCTTAATAAGAAGTTATTTTATCTTATAAATGGAGGAACCTCATCTTCCAAGTGCATTGCACTGCACTCTGCATTAACATTTTTTTTTCCTTGGTTGGATTGCTCATATTAGTTGTTCATTTTCTTGCATTTCTACAACTTCATACATTTATATGTTCTTTTGTTGTCAGTTGGTCCAAGTAATATGCCATGTCAGTTGATGGTTGGTTTCTTTGCATATGCAAAATCATTTGATATAAATGTGGACAAGGGAGAGTTAGAAGGTACGTAGAACTTTCTCCCACATTGTAGATGTCATCCCTTATTTATTGTGCATTGATGTTAATTTTGAGTATGATCATTCTGGAATTTTGACATTTCTTGAGCTTGTTTTAGATGCTCGATGGCACAGTAGAGAGGACGTAAGGAACGCTTTGACGTTTGCAGAATATGAGAAGGCTCAAAGAACTGCAGCAGCCAAGGTCGAGCAAATGTGTAAAGGAGTCGAGCGACAACAAAGCTTATCTTCGGATTTCAATGTCGAAAGTGGTGAACTCGCCCCAATGTTTGTTCCCGGGCCATTCGCAATTGCTCATCATCTCATCTCGTCATGGGTCTATAATGAAGGATCAGGATCAGGATTGAACAAAGATAGAAATTCTTTTTCCAACTTGTAGTTTCAAGGTTATAATTGTTCTTTCAATTATTTTGCTTACTGAAGTCATTCAATGTTAAAAGCTTCTGTTGTAAGTAAAATTTAGCAAACTTTAGTTTCTGAATGTGGAAATAAGAAAGATAGAGATGAAGAGTGAGAGAATCAAGAAGATTGAAATTTTAGCTTATTTATTATATTTGTTAACATTTGGTTCAAGAAACTGTTGTCCTTTTGAACCTTCCAGTGTTTTAATGAAGGGGGAATTATGTTCGGTACCGTGCGCCCATCTTTGTGCACGTCAC ATGAAATCAATTTCACTTTCCCCTCGTCATTTCAACTCTTACAAATCCTTCCACTCCCACAATCCCTTCAATCCACCATCATCTTCTTCAATCTCTTCTTCCACTTCAATTCCTACAATGTCCATCAGTTTAAACTCTCATGCCTTCGCCGGTAACCCCATCAAGTTGAAAACCCCTAAACCCGAAAACCCATTTTCCGCTTCTTCAGCTCTCGAATCTCTCAATTCTCAACTTTTAAACAACACCCACTTCTCTTCTTCCATCAATTTCAAGGTTTTGCCCTTCAAAAAGGGCAAGCCTTTAGCCACTTTCAGTGCTCGGCCTAATGATACCTCCTCTACCTGGCATCTGGGTTGGATTGATTTGACTGATTTCAAGGCTCTGTTTGCTAATTCGACGCTTGAATTGACTGGGGATTTATTTGTCTATTTGGGTTATCTGGATGAAGAGAATTCCGTTTATTGGGGTATTGATGTTTCGAGTGAGGAGGTTTTGGTTTCTGAATTTGCGAGTAAGTCACTCTGTTTTGTGGAGGTTAGAACTCTTATGGTGGCTTCTGATTGGGCTGATGCTCGAGCTATGGGAGAATTGGCTATTGCTGGTCATGCTAGGGCGTTGCTGGAATGGCACAATGTGTCCAAATTTTGTGGACACTGTGGAGGAAAAACAGTACCTGTGGAAGCAGGAAAACGGAAGCAATGTTCTAATCCCTCGTGCAAGAAGAAGGTTTATCCTCGTGTTGATCCGGTAGTCATTATGCTAGTCATTGATAGAGAAAATGATCGTGCACTCTTGAGTAAGCAATCAAGATTTGTTCCACGAATGTGGAGTTGCCTAGCTGGTTTTATAGAGGTACTTTTCTGA MKSISLSPRHFNSYKSFHSHNPFNPPSSSSISSSTSIPTMSISLNSHAFAGNPIKLKTPKPENPFSASSALESLNSQLLNNTHFSSSINFKVLPFKKGKPLATFSARPNDTSSTWHLGWIDLTDFKALFANSTLELTGDLFVYLGYLDEENSVYWGIDVSSEEVLVSEFASKSLCFVEVRTLMVASDWADARAMGELAIAGHARALLEWHNVSKFCGHCGGKTVPVEAGKRKQCSNPSCKKKVYPRVDPVVIMLVIDRENDRALLSKQSRFVPRMWSCLAGFIEVLF Homology
BLAST of Cucsat.G19485.T7 vs. ExPASy Swiss-Prot
Match: Q94A82 (Nudix hydrolase 19, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT19 PE=1 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.4e-85 Identity = 158/254 (62.20%), Postives = 196/254 (77.17%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy Swiss-Prot
Match: Q29RH3 (NAD-capped RNA hydrolase NUDT12 OS=Bos taurus OX=9913 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.3e-16 Identity = 60/187 (32.09%), Postives = 85/187 (45.45%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy Swiss-Prot
Match: Q9BQG2 (NAD-capped RNA hydrolase NUDT12 OS=Homo sapiens OX=9606 GN=NUDT12 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-16 Identity = 60/187 (32.09%), Postives = 84/187 (44.92%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy Swiss-Prot
Match: Q4R7L8 (NAD-capped RNA hydrolase NUDT12 OS=Macaca fascicularis OX=9541 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-16 Identity = 61/187 (32.62%), Postives = 84/187 (44.92%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy Swiss-Prot
Match: Q5RD76 (NAD-capped RNA hydrolase NUDT12 OS=Pongo abelii OX=9601 GN=NUDT12 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 8.2e-16 Identity = 60/187 (32.09%), Postives = 85/187 (45.45%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. NCBI nr
Match: XP_004139323.1 (nudix hydrolase 19, chloroplastic [Cucumis sativus] >KGN60660.1 hypothetical protein Csa_019302 [Cucumis sativus]) HSP 1 Score: 569 bits (1467), Expect = 3.44e-202 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. NCBI nr
Match: TYJ97797.1 (nudix hydrolase 19 [Cucumis melo var. makuwa]) HSP 1 Score: 533 bits (1373), Expect = 6.24e-188 Identity = 271/284 (95.42%), Postives = 275/284 (96.83%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. NCBI nr
Match: XP_008457828.1 (PREDICTED: nudix hydrolase 19, chloroplastic [Cucumis melo]) HSP 1 Score: 529 bits (1362), Expect = 3.16e-186 Identity = 269/285 (94.39%), Postives = 274/285 (96.14%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. NCBI nr
Match: KAA0061588.1 (nudix hydrolase 19 [Cucumis melo var. makuwa]) HSP 1 Score: 480 bits (1235), Expect = 1.61e-167 Identity = 237/245 (96.73%), Postives = 240/245 (97.96%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. NCBI nr
Match: XP_038889095.1 (nudix hydrolase 19, chloroplastic [Benincasa hispida]) HSP 1 Score: 481 bits (1238), Expect = 2.60e-167 Identity = 245/290 (84.48%), Postives = 264/290 (91.03%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy TrEMBL
Match: A0A0A0LF49 (NAD(+) diphosphatase OS=Cucumis sativus OX=3659 GN=Csa_2G006060 PE=4 SV=1) HSP 1 Score: 569 bits (1467), Expect = 1.67e-202 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy TrEMBL
Match: A0A5D3BF96 (NAD(+) diphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00070 PE=4 SV=1) HSP 1 Score: 533 bits (1373), Expect = 3.02e-188 Identity = 271/284 (95.42%), Postives = 275/284 (96.83%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy TrEMBL
Match: A0A1S3C5Z4 (NAD(+) diphosphatase OS=Cucumis melo OX=3656 GN=LOC103497415 PE=4 SV=1) HSP 1 Score: 529 bits (1362), Expect = 1.53e-186 Identity = 269/285 (94.39%), Postives = 274/285 (96.14%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy TrEMBL
Match: A0A5A7V1Z9 (NAD(+) diphosphatase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001530 PE=3 SV=1) HSP 1 Score: 480 bits (1235), Expect = 7.77e-168 Identity = 237/245 (96.73%), Postives = 240/245 (97.96%), Query Frame = 0
BLAST of Cucsat.G19485.T7 vs. ExPASy TrEMBL
Match: A0A6J1G3U0 (NAD(+) diphosphatase OS=Cucurbita moschata OX=3662 GN=LOC111450497 PE=4 SV=1) HSP 1 Score: 462 bits (1190), Expect = 2.40e-160 Identity = 231/281 (82.21%), Postives = 252/281 (89.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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