Cucsat.G19085.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATACCGCAGCACCAACCAAAGCAGAAACCGCATTTTTCTCCACAGTCCTACCTTTTTCTCCCCCTTCTCTATATTCTCTCCGTCACTTTCCTGAGAAATTTCCACTCATCGGAGACGCAAATAATTCATCCTCTTATAGCTATCCTCCTTGTAGGTATGATCGATTAGACAAATCCAAGCCCTAATCCTCAAAATCATGGTGAGCATTCGATTGAAATCGAAACCTCCATTGCCGTAATGATCGATCTGTTTCCAAATTCCTCAATTATTCTCACTCTTCTTTCTCATTTTTTGTGATTTTTTGTGGAACTAGGAGAAAATCGGTGAAATCGATAAGAATGAAGAGGAAGAAGGGGAAGGAGAAGGTGAAATTGAATGGCCGCCATGGCTGGAACCTCTTTTAAGTACGAGCTTCTTCGTTCAATGTAAGAACCATGCCGATTCGCACAAATCTGAATGCAATATGTATTGTTTGGATTGTATGAACGGAGCTCTCTGTTCTCTCTGTCTTAATTCTCATAAAGATCATAGAGCAATTCAGGTACCGCTCTGTTCTTCTTCTCTTGTTCTTTTAAATTCTTTGATCGGATTGTTTTGTTTTTTTTTTTTTTTTTTTTTGCGATTTCTTCAATTATTGGATAATATATATATTTTTTCTTTTTTGAATTGGGAAATATTTGATTGTTTTGAATGAAGGGAATGTGGAAATTACTGTTTGTTACCTACTAACAGCAACAAAATGCCAAATCATAACTATATAAACTGTGAAGTGAAGTCTATCTCTCTCTTTTTTTATTTTGCTATTTTTTTTATTCTCTTCTTTTATTTCCCTTCTAATGTTAAAGACTAAAGTGCAAGTTTGGTGTGGTTTGTTTTGTTATATTTTATAAAGTTACTTTTCATTCTTAATGTAAAAAGTAAAAATGTTCAAATATAAAATGTAAAAAATTTTTAATTAATATACTCAGTTAATATTACTATTTGAAAGTGAATGATACTGATTATTTCTTTCTTCTTTTTAAAAAGTAGAAGGCTTTCAATATTGATAGATAACTAAAAGATTTTTTTAAAAAGATTGAAATTATAGTTACATTTTTATACATAATTTTTACTTTATATCACATAAATCCACTAGATACCTTTATTACATAAATATTTATTGTTTAGTTGAGACATGCGGGTAGCGTATTTAGCAACCATAAAACTCAATTACATATCAAATCGATTAATATTTTGTGAATGATATTTTATGGAATACTTTTTTTGAGTTTATTTAGTACAAAATATAGTTACTGTATCCTAATACAATAACTATATTGTATTTATGTATGAAAAAACTAATACAATATGTTATTGTATTTATGTATGAAAAAAGAAATGAAAGGATGAATAATTATTATATATGTGTTTGTTAATGTTATTATTTATAGATAAGGAGATCGTCATACCATGATGTGATAAGGGTATGTGAGATACAGAAATTTGTGGACATAACAGGAGTTCAAACTTACATCATTAACAGTGCAAGGATTGTGTTCTTGAACGAACGCCCTCAGCCTCGTCCTTCTAAAGCTCTCACTAATATCTGCCTCGTCTGTCATCGTTCTCTTCTTGATTCCTTCCATTTCTGCTCTCTTGGTTGCAAGGTTTTTCTTTTTCCCTTCCTTTTAATTTTCATCTCTCTTCTTTACTTTTACACAATCATTATCAACCAACACACATCATAAATTCCACCCTTTTTCCTCTCTTCTTTTCATTTCTAAATTATTTTTTTCTAACCTTTTTTAAAAATGGTATATATAACAAAATATATCAACATGATAGACTCCAATATACTCTATCGCTGATAAAACTCTATCAACGATATAGTTGAATTAAAGTTTGTTATATCTGCAAATATTTTGGGTTTATTTTTCTTAGAATTTCAAATTCAATTTTTTTTTTAAAATCTAGTATAATGAAATTGAACTATATTTACAAAATCTAGCAAAATTTTAAATTCTATCAGTGTTAGTTATTGATAAAGGTTAATACACTCCTATTAGTGCTATCATTATTAAAATCTAGATTTTTTTTAGTATATTTTACCAATATTTTCAATAGTTTTACTATTTACAACAATTCTTTATTTAAATATGTTTTCACAACTAAATATACATTCGTATATTAATACCAGAGTATGAAAGAAATTACAATATATAGATAAATATTCCAATTATCTATTGCAAAAAGTACTATGGTTTCAAAGTTTGTATTTGACTTGGAACTCATTGCTTTTAGAATAGCTAAAAGGTATCTACTCTTTTGAAAATGAATTAAACAATTTGAATTAATTAATAGACAATTAACCTTATAGAGATTGAAGCTTTGATATATATTTGGTGAAAAATTAATGACTAAAAGTGTTAATCTTAAAATCTAATGATCAAAATAAAAACAATTTTCAAATATCAACTGTAAAAACTAACTAAAACCATAGCAACATGTAACTAAAGTTAAATTAAATACAAAAAATTAAGGAAAAAAAAGTTCTCATTTTCCTAAAGTTTTTTATATATGTTCTTATAAAAGAAGATAATTTCATTTCAGAAGCTTTTTCTTTTTTCAAATTTGTTCTCAGCATACTGTTACTTAGGTTTAGTTTGTTAACTATTTTTAGAGTGGCTGAAGTATAAGCTTAAAATGATCAAATGAGTAATGGAAAACAAATTAAAACTATAGGAATATAGTTGAAATTCTGAGGTTACTTTGTGTATTTTAACCAAGTATAAATGATGAACTATTATAGAAGTACAAATGGAATCTAATTAATTGAAAACCCCCAAATATATATTTACTTATAGAAAAATTATATTGAAAGTATCCCAAAAAAAATTATCCTCCGGCGGTTGAGACCCCACCCCCACCCTCATTACAACATAAAGTAATATATATATAAAAGAGAAAAAGTAAAAATAAAGTCCAAATTACAAAAAGCTACCCCTACTTTTTCAATAATTTAAAATCAATCATATTCTTTCAAAATGGATGTCATTTAGCGACGTGTGATAAATATTTTGCATTTGGAATGAAAATTCTTCAAACTTTATAAAGAGTTAAAAGAATAATATTACAATTTTAAAAGAAAATAACAAAGATAAGGGTAGTTTTTGTAGTTTTGCGAAAAGAAAATGTTAGAGACCTATTTTGCAAAAAATAGCAAAAAAAAAAAAAAACAACGAATGAAATGTAAAAAAAAAAATATAGATACACTAATATA ATGGAGAAAATCGGTGAAATCGATAAGAATGAAGAGGAAGAAGGGGAAGGAGAAGGTGAAATTGAATGGCCGCCATGGCTGGAACCTCTTTTAAGTACGAGCTTCTTCGTTCAATGTAAGAACCATGCCGATTCGCACAAATCTGAATGCAATATGTATTGTTTGGATTGTATGAACGGAGCTCTCTGTTCTCTCTGTCTTAATTCTCATAAAGATCATAGAGCAATTCAGATAAGGAGATCGTCATACCATGATGTGATAAGGGTATGTGAGATACAGAAATTTGTGGACATAACAGGAGTTCAAACTTACATCATTAACAGTGCAAGGATTGTGTTCTTGAACGAACGCCCTCAGCCTCGTCCTTCTAAAGCTCTCACTAATATCTGCCTCGTCTGTCATCGTTCTCTTCTTGATTCCTTCCATTTCTGCTCTCTTGGTTGCAAGGTTTTTCTTTTTCCCTTCCTTTTAATTTTCATCTCTCTTCTTTACTTTTACACAATCATTATCAACCAACACACATCATAA MEKIGEIDKNEEEEGEGEGEIEWPPWLEPLLSTSFFVQCKNHADSHKSECNMYCLDCMNGALCSLCLNSHKDHRAIQIRRSSYHDVIRVCEIQKFVDITGVQTYIINSARIVFLNERPQPRPSKALTNICLVCHRSLLDSFHFCSLGCKVFLFPFLLIFISLLYFYTIIINQHTS Homology
BLAST of Cucsat.G19085.T2 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.7e-30 Identity = 62/130 (47.69%), Postives = 85/130 (65.38%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. NCBI nr
Match: XP_004148078.1 (uncharacterized protein LOC101216747 [Cucumis sativus] >KGN63424.1 hypothetical protein Csa_022240 [Cucumis sativus]) HSP 1 Score: 313 bits (803), Expect = 2.38e-106 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. NCBI nr
Match: XP_008459164.1 (PREDICTED: uncharacterized protein LOC103498364 [Cucumis melo]) HSP 1 Score: 311 bits (798), Expect = 1.37e-105 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. NCBI nr
Match: XP_038902894.1 (uncharacterized protein LOC120089480 [Benincasa hispida]) HSP 1 Score: 292 bits (748), Expect = 6.04e-98 Identity = 139/152 (91.45%), Postives = 147/152 (96.71%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. NCBI nr
Match: XP_023512107.1 (uncharacterized protein LOC111776925 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283 bits (725), Expect = 1.46e-94 Identity = 136/149 (91.28%), Postives = 140/149 (93.96%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. NCBI nr
Match: XP_022943399.1 (uncharacterized protein LOC111448175 [Cucurbita moschata]) HSP 1 Score: 280 bits (717), Expect = 2.58e-93 Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. ExPASy TrEMBL
Match: A0A0A0LR17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G445270 PE=4 SV=1) HSP 1 Score: 313 bits (803), Expect = 1.15e-106 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. ExPASy TrEMBL
Match: A0A1S3C9J0 (uncharacterized protein LOC103498364 OS=Cucumis melo OX=3656 GN=LOC103498364 PE=4 SV=1) HSP 1 Score: 311 bits (798), Expect = 6.66e-106 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. ExPASy TrEMBL
Match: A0A6J1FU72 (uncharacterized protein LOC111448175 OS=Cucurbita moschata OX=3662 GN=LOC111448175 PE=4 SV=1) HSP 1 Score: 280 bits (717), Expect = 1.25e-93 Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. ExPASy TrEMBL
Match: A0A6J1JBN2 (uncharacterized protein LOC111484296 OS=Cucurbita maxima OX=3661 GN=LOC111484296 PE=4 SV=1) HSP 1 Score: 280 bits (716), Expect = 1.77e-93 Identity = 136/151 (90.07%), Postives = 141/151 (93.38%), Query Frame = 0
BLAST of Cucsat.G19085.T2 vs. ExPASy TrEMBL
Match: A0A6J1G977 (uncharacterized protein LOC111451854 OS=Cucurbita moschata OX=3662 GN=LOC111451854 PE=4 SV=1) HSP 1 Score: 279 bits (714), Expect = 5.01e-93 Identity = 136/157 (86.62%), Postives = 142/157 (90.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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