Cucsat.G18696.T4 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G18696.T4
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transcription factor bHLH111
Location	ctg3408: 511268 .. 513701 (-)
RNA-Seq Expression	Cucsat.G18696.T4
Synteny	Cucsat.G18696.T4

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACCAACCCCTTTCATTCTTGTTTCCTTATAATAATTCACTTTTCCATCCTCACAAACCCAACTAAATAACACAAGAAGATTTAGAAAGAAGAAGAAAGAAATGGCAGAGGAGTGCACTGAGAGCTCTGTTGCTACCTCTAATTCAACTCCATCAAACTGGTGGGATATTAATCATAATCATAATCACCATCACCATCACCATCCTTCACTTTCTTATAATTCTCATTGGCTTCTCCAAAACCCTAATTCCAATTCCTCTTGTGAAGAGGATGTTTCCATCTCTACTTCTTCTTTTACCAACGCTTCTAATCACCTTCTTCCTCACCATCCTTCTGATAATAACCACCTTTGGACTCAAGTTTTGCTGTAAGCTCTCTTTTTTTCTTTCTTTTACTTCCATATAACACCTTAAAAGTTTTACGATTTTACTCTTTTGTATGTGTGTATATATATATATATATTTGTAATCTCTTAGGTTCATATTCTATAAGTTCTTATTTCATATTTGAGAAGTTTTTTCTAAAGTTATCAAACTATTTTTCAAAAACATATTTTTGTTTCATAAGAACTAACCATTTGATTTTTAATAAATTAAACGTATTTTCTTCCAATTACTTACCCTCATTTGCATTTTTCTTCAGTAAAATATTTAAATTTTAGGTCAAATTCTAATCTCAATAACTATTTTTTTTTGGTTTATAAAAGGTAACCTAGTTTGAAAATTATTTGTAAGAATTAGATAACAAACTAAAAAGTTTAGAGGCACGTATTTTTAAAATCTTACACAAAAAAATGAAATGGTTAGAAAAATCAGAAGAAAAAACTTATGTAAACAAAAAAACAAAAACAATTTTAAAAATCCATAAACAAAATAGAGCTTAACATTATATAGAACAGACCTTAATGAAAAAGGAAATCTTTAACTTGAGCTAATTGAGTGGTCTGAGAGTCACCATGCATATACCTAGACAATCTTAATTAGAAAAAGAGTATATATATAACTTTACGAAATTCTTGTTATTAATTTTGAACCTATTTGCAGGAACATAGGAAATGATGTAGAATTAGAAAGCAACGAAGAAAACATAGAAGGGAATTTCCTGGAGACAATATCATCAAGATCAAGCATGTCCACCACCGGAATCTTCGAGTCCACCGCATGCAGCGATTACCTTAAGAAAATGGACACATCAAACAACGATAACAACAACTGGGACGACACTTTCCAAACCTTCAACACCAACAACAATAACAATAACAGACTTCTTACGTCCCACACTCACATGCTCCAAAACGAAAGGTTCTTGAAGCTTTCTAATCTCGTAAACAGGTGGTCCATTGCCCTCCCGAACCCAGACCCACATCTACGACACTTGACGATGGATGACCAACACGACCATCTCCGAGCCAGCACTATGCCAACTCATGAAATACTCGAGCCAGATGGGACCATGCCTCACCAAGGACTCGACCCATGTGACTCAAGCTTCCTTAGGAGATCCCTTCAAAATCAAAATTATGGGGATTATATTTCTTTTAATGGACGACTAGCTAAACCGGTGGTCGGCATCAATGGTTCGAGTAATAATCCTTGTTTTAAGTCGTCACTGAATTTGTCTGCTGATAGTAAGAAACAGATTCACCAAATTTGTTCGCCGGTAAGCATATTATCTCTTCTATTATAATATTAAAAGAAGATTAAATCTTATTGGAAAATTAGAAATTCAAGCAAAGTGGCTTCAGCCATCTATCTTTATTATTTAAAATTAAACTAAGCTTTCTATATATTTTTTGTTTACGGATTATCAAATGAAACCTTAGCTTCAATACATTTTTGGCTTAGTAGTGTGTTTGGCACCTAGGATTAAAAATAGTTTTTGTTCCTCGTAGTGCTTTTATTTTAAAAAATATAAAAATCAAAAGTGGGATGAAAAATTCTATATTTAGATTATTAAAATTATTAATAATTCAATATGTTTTTAGAGAAGGCATTAAACATGTTCACATAAAATAATCCCACTAAAGTATAATGGATCAAGTAAGAAGTGCATTTAGTTCTGTTCGTTTGTAATAAAACTTTTTTCATATTTACTGGTAAGAAATCATAGTGTTATAATAATATTTGACTTTTGTGAGTTGCATTAATAATGTGAATCATGAAGTAGAAGGATAAAAAGTAATGAGAATGTTTGAATTTTAATGAATGAGAAATTGCAGACAAGAATTAGTGGAAGAGGAAGTGGAGGAGTTTCGAACGAAGGGAAGAAGAAAAGATCCGAAGAATCTTCGTCTGAAACTTCAACCAAAAAGGCTAAGCAAGATAACTCAACACCTTCTTCCAATAAGGTCTATTATTTACATCTAACTTCTACTTTTATGTGTTTCATTTTCAACTAAATTTTGACTGATCATTACTAATTATTACATATAGT

Coding sequence (CDS)

ATGGCAGAGGAGTGCACTGAGAGCTCTGTTGCTACCTCTAATTCAACTCCATCAAACTGGTGGGATATTAATCATAATCATAATCACCATCACCATCACCATCCTTCACTTTCTTATAATTCTCATTGGCTTCTCCAAAACCCTAATTCCAATTCCTCTTGTGAAGAGGATGTTTCCATCTCTACTTCTTCTTTTACCAACGCTTCTAATCACCTTCTTCCTCACCATCCTTCTGATAATAACCACCTTTGGACTCAAGTTTTGCTGAACATAGGAAATGATGTAGAATTAGAAAGCAACGAAGAAAACATAGAAGGGAATTTCCTGGAGACAATATCATCAAGATCAAGCATGTCCACCACCGGAATCTTCGAGTCCACCGCATGCAGCGATTACCTTAAGAAAATGGACACATCAAACAACGATAACAACAACTGGGACGACACTTTCCAAACCTTCAACACCAACAACAATAACAATAACAGACTTCTTACGTCCCACACTCACATGCTCCAAAACGAAAGGTTCTTGAAGCTTTCTAATCTCGTAAACAGGTGGTCCATTGCCCTCCCGAACCCAGACCCACATCTACGACACTTGACGATGGATGACCAACACGACCATCTCCGAGCCAGCACTATGCCAACTCATGAAATACTCGAGCCAGATGGGACCATGCCTCACCAAGGACTCGACCCATGTGACTCAAGCTTCCTTAGGAGATCCCTTCAAAATCAAAATTATGGGGATTATATTTCTTTTAATGGACGACTAGCTAAACCGGTGGTCGGCATCAATGGTTCGAGTAATAATCCTTGTTTTAAGTCGTCACTGAATTTGTCTGCTGATAGTAAGAAACAGATTCACCAAATTTGTTCGCCGACAAGAATTAGTGGAAGAGGAAGTGGAGGAGTTTCGAACGAAGGGAAGAAGAAAAGATCCGAAGAATCTTCGTCTGAAACTTCAACCAAAAAGGCTAAGCAAGATAACTCAACACCTTCTTCCAATAAGGTCTATTATTTACATCTAACTTCTACTTTTATGTGTTTCATTTTCAACTAA

Protein sequence

MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSISTSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKVYYLHLTSTFMCFIFN

Homology

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy Swiss-Prot
Match: Q9FYJ6 (Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.4e-04
Identity = 57/171 (33.33%), Postives = 84/171 (49.12%), Query Frame = 0


Query: 173 NERFLKLSNLVNR-WSIALPNPDPHLRH-LTMDDQHDHLRASTMPTH----EILEPDGTM 232
           ++R  KL++LV + WSIA PN +P + H L     HDH +   +  +    E+   +   
Sbjct: 47  DQRLSKLTDLVGKHWSIAPPN-NPDMNHNLHHHFDHDHSQNDDISMYRQALEVKNEEDLC 106

Query: 233 PHQGLDPCDSSFLRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKK 292
            + G     S F      ++++ D      RL++P+  IN  S  PCFK +LN+S  +KK
Sbjct: 107 YNNGSSGGGSLFHDPIESSRSFLDI-----RLSRPLTDIN-PSFKPCFK-ALNVSEFNKK 166

Query: 293 QIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNK 338
           + HQ  S   +      G +N GKKKR EE S E S K    + ST S  K
Sbjct: 167 E-HQTASLAAV----RLGTTNAGKKKRCEEISDEVSKKAKCSEGSTLSPEK 204

[Close]

BLAST of Cucsat.G18696.T4 vs. NCBI nr
Match: XP_004140441.1 (transcription factor bHLH111 [Cucumis sativus] >XP_031741022.1 transcription factor bHLH111-like [Cucumis sativus] >KGN50812.1 hypothetical protein Csa_018834 [Cucumis sativus])

HSP 1 Score: 665 bits (1717), Expect = 5.93e-239
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST
Sbjct: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS 180
           TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS
Sbjct: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS 180

Query: 181 NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR 240
           NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR
Sbjct: 181 NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR 240

Query: 241 RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR 300
           RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR
Sbjct: 241 RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR 300

Query: 301 GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKV 338
           GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNK+
Sbjct: 301 GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKI 338

[Close]

BLAST of Cucsat.G18696.T4 vs. NCBI nr
Match: KAA0046207.1 (transcription factor bHLH111 [Cucumis melo var. makuwa] >TYK14173.1 transcription factor bHLH111 [Cucumis melo var. makuwa])

HSP 1 Score: 604 bits (1557), Expect = 5.27e-215
Identity = 315/339 (92.92%), Postives = 324/339 (95.58%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLL NPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTN   HLLPHHPSDNNHLWTQVLLNIGNDVEL+SNEE+IEGNFLETISSRSSMST
Sbjct: 61  STSSFTN---HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTS-HTHMLQNERFLKL 180
           TGIFE TACSDYLKKMDTSNN+NNNWDDTFQTFNTN NNNNRLLTS   HMLQNERFLKL
Sbjct: 121 TGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQAHMLQNERFLKL 180

Query: 181 SNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEP-DGTMPHQGLDPCDSSF 240
           SNLVNRWSIALP+PDPHLRHLT DDQHDHLRA+T+PTHEILE  DG +PHQGLDPCDSSF
Sbjct: 181 SNLVNRWSIALPSPDPHLRHLT-DDQHDHLRATTVPTHEILESADGVVPHQGLDPCDSSF 240

Query: 241 LRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300
           LRR+LQNQNYGDYISFNGRLAKP+VGIN SSNNPCFKSSLNLSADSKKQIHQICSPTRIS
Sbjct: 241 LRRTLQNQNYGDYISFNGRLAKPMVGINSSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300

Query: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNK 337
           GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTP SNK
Sbjct: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPYSNK 335

[Close]

BLAST of Cucsat.G18696.T4 vs. NCBI nr
Match: XP_008460218.1 (PREDICTED: transcription factor bHLH111 [Cucumis melo])

HSP 1 Score: 604 bits (1558), Expect = 8.86e-215
Identity = 315/340 (92.65%), Postives = 325/340 (95.59%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLL NPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTN   HLLPHHPSDNNHLWTQVLLNIGNDVEL+SNEE+IEGNFLETISSRSSMST
Sbjct: 61  STSSFTN---HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTS-HTHMLQNERFLKL 180
           TGIFE TACSDYLKKMDTSNN+NNNWDDTFQTFNTN NNNNRLLTS   HMLQNERFLKL
Sbjct: 121 TGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQAHMLQNERFLKL 180

Query: 181 SNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEP-DGTMPHQGLDPCDSSF 240
           SNLVNRWSIALP+PDPHLRHLT DDQHDHLRA+T+PTHEILE  DG +PHQGLDPCDSSF
Sbjct: 181 SNLVNRWSIALPSPDPHLRHLT-DDQHDHLRATTVPTHEILESADGVVPHQGLDPCDSSF 240

Query: 241 LRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300
           LRR+LQNQNYGDYISFNGRLAKP+VGIN SSNNPCFKSSLNLSADSKKQIHQICSPTRIS
Sbjct: 241 LRRTLQNQNYGDYISFNGRLAKPMVGINSSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300

Query: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKV 338
           GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTP SNK+
Sbjct: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPYSNKM 336

[Close]

BLAST of Cucsat.G18696.T4 vs. NCBI nr
Match: XP_038877207.1 (transcription factor bHLH111 isoform X1 [Benincasa hispida])

HSP 1 Score: 507 bits (1305), Expect = 2.30e-176
Identity = 283/346 (81.79%), Postives = 297/346 (85.84%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTP NWWDINHN    HHHHPSLSYNSHWLLQNPNSNSSCE+D   
Sbjct: 1   MAEECTESSVATSNSTPQNWWDINHNQ---HHHHPSLSYNSHWLLQNPNSNSSCEDD--- 60

Query: 61  STSSFTNASNHL------LPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISS 120
             SSFTNASNH       L HHPSD+NH WTQVLLNIGNDVEL+SNEE+IE NFLETISS
Sbjct: 61  --SSFTNASNHSSLTSNHLLHHPSDHNHHWTQVLLNIGNDVELQSNEEDIEANFLETISS 120

Query: 121 RSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNR--LLTSHTHMLQ 180
           RS MST GIFE TACSDYLKKMDT+NN  NNWDDTFQTF  NNNNNN   L TSHTHMLQ
Sbjct: 121 RS-MSTAGIFEPTACSDYLKKMDTTNN--NNWDDTFQTFTNNNNNNNNGLLTTSHTHMLQ 180

Query: 181 NERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLD 240
           NERFLKLSNLVN WSIALP  D  LRHL M+DQHDHLRA+T+PTHE+LEPDGT+P  GLD
Sbjct: 181 NERFLKLSNLVNTWSIALPRQDAQLRHL-MEDQHDHLRATTVPTHEVLEPDGTVPDPGLD 240

Query: 241 PCDSSFLRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQIC 300
           P DSS  RRS+ NQNYGDYISFNGRLAK VVGING SNNPCFKSSLNLSADSKKQIHQI 
Sbjct: 241 PFDSSIPRRSIHNQNYGDYISFNGRLAKSVVGINGWSNNPCFKSSLNLSADSKKQIHQIS 300

Query: 301 SPTRISGRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKV 338
           SPTRISGRGSG V +EGKKKRSEESS ETSTKKAKQDNSTP+SNK+
Sbjct: 301 SPTRISGRGSG-VLSEGKKKRSEESS-ETSTKKAKQDNSTPASNKI 332

[Close]

BLAST of Cucsat.G18696.T4 vs. NCBI nr
Match: XP_038877208.1 (transcription factor bHLH111 isoform X2 [Benincasa hispida])

HSP 1 Score: 452 bits (1163), Expect = 2.05e-155
Identity = 245/302 (81.13%), Postives = 256/302 (84.77%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTP NWWDINHN    HHHHPSLSYNSHWLLQNPNSNSSCE+D   
Sbjct: 1   MAEECTESSVATSNSTPQNWWDINHNQ---HHHHPSLSYNSHWLLQNPNSNSSCEDD--- 60

Query: 61  STSSFTNASNHL------LPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISS 120
             SSFTNASNH       L HHPSD+NH WTQVLLNIGNDVEL+SNEE+IE NFLETISS
Sbjct: 61  --SSFTNASNHSSLTSNHLLHHPSDHNHHWTQVLLNIGNDVELQSNEEDIEANFLETISS 120

Query: 121 RSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNR--LLTSHTHMLQ 180
           RS MST GIFE TACSDYLKKMDT+NN  NNWDDTFQTF  NNNNNN   L TSHTHMLQ
Sbjct: 121 RS-MSTAGIFEPTACSDYLKKMDTTNN--NNWDDTFQTFTNNNNNNNNGLLTTSHTHMLQ 180

Query: 181 NERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLD 240
           NERFLKLSNLVN WSIALP  D  LRHL M+DQHDHLRA+T+PTHE+LEPDGT+P  GLD
Sbjct: 181 NERFLKLSNLVNTWSIALPRQDAQLRHL-MEDQHDHLRATTVPTHEVLEPDGTVPDPGLD 240

Query: 241 PCDSSFLRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQIC 294
           P DSS  RRS+ NQNYGDYISFNGRLAK VVGING SNNPCFKSSLNLSADSKKQIHQI 
Sbjct: 241 PFDSSIPRRSIHNQNYGDYISFNGRLAKSVVGINGWSNNPCFKSSLNLSADSKKQIHQIS 290

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL
Match: A0A0A0KQW5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 SV=1)

HSP 1 Score: 665 bits (1717), Expect = 2.87e-239
Identity = 337/338 (99.70%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST
Sbjct: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS 180
           TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS
Sbjct: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTSHTHMLQNERFLKLS 180

Query: 181 NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR 240
           NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR
Sbjct: 181 NLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEPDGTMPHQGLDPCDSSFLR 240

Query: 241 RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR 300
           RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR
Sbjct: 241 RSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGR 300

Query: 301 GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKV 338
           GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNK+
Sbjct: 301 GSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKI 338

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL
Match: A0A5D3CQN9 (Transcription factor bHLH111 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold688G00380 PE=4 SV=1)

HSP 1 Score: 604 bits (1557), Expect = 2.55e-215
Identity = 315/339 (92.92%), Postives = 324/339 (95.58%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLL NPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTN   HLLPHHPSDNNHLWTQVLLNIGNDVEL+SNEE+IEGNFLETISSRSSMST
Sbjct: 61  STSSFTN---HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTS-HTHMLQNERFLKL 180
           TGIFE TACSDYLKKMDTSNN+NNNWDDTFQTFNTN NNNNRLLTS   HMLQNERFLKL
Sbjct: 121 TGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQAHMLQNERFLKL 180

Query: 181 SNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEP-DGTMPHQGLDPCDSSF 240
           SNLVNRWSIALP+PDPHLRHLT DDQHDHLRA+T+PTHEILE  DG +PHQGLDPCDSSF
Sbjct: 181 SNLVNRWSIALPSPDPHLRHLT-DDQHDHLRATTVPTHEILESADGVVPHQGLDPCDSSF 240

Query: 241 LRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300
           LRR+LQNQNYGDYISFNGRLAKP+VGIN SSNNPCFKSSLNLSADSKKQIHQICSPTRIS
Sbjct: 241 LRRTLQNQNYGDYISFNGRLAKPMVGINSSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300

Query: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNK 337
           GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTP SNK
Sbjct: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPYSNK 335

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL
Match: A0A1S3CD90 (transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 4.29e-215
Identity = 315/340 (92.65%), Postives = 325/340 (95.59%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLQNPNSNSSCEEDVSI 60
           MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLL NPNSNSSCEEDVSI
Sbjct: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLSYNSHWLLPNPNSNSSCEEDVSI 60

Query: 61  STSSFTNASNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISSRSSMST 120
           STSSFTN   HLLPHHPSDNNHLWTQVLLNIGNDVEL+SNEE+IEGNFLETISSRSSMST
Sbjct: 61  STSSFTN---HLLPHHPSDNNHLWTQVLLNIGNDVELQSNEEDIEGNFLETISSRSSMST 120

Query: 121 TGIFESTACSDYLKKMDTSNNDNNNWDDTFQTFNTNNNNNNRLLTS-HTHMLQNERFLKL 180
           TGIFE TACSDYLKKMDTSNN+NNNWDDTFQTFNTN NNNNRLLTS   HMLQNERFLKL
Sbjct: 121 TGIFEPTACSDYLKKMDTSNNNNNNWDDTFQTFNTNTNNNNRLLTSSQAHMLQNERFLKL 180

Query: 181 SNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTHEILEP-DGTMPHQGLDPCDSSF 240
           SNLVNRWSIALP+PDPHLRHLT DDQHDHLRA+T+PTHEILE  DG +PHQGLDPCDSSF
Sbjct: 181 SNLVNRWSIALPSPDPHLRHLT-DDQHDHLRATTVPTHEILESADGVVPHQGLDPCDSSF 240

Query: 241 LRRSLQNQNYGDYISFNGRLAKPVVGINGSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300
           LRR+LQNQNYGDYISFNGRLAKP+VGIN SSNNPCFKSSLNLSADSKKQIHQICSPTRIS
Sbjct: 241 LRRTLQNQNYGDYISFNGRLAKPMVGINSSSNNPCFKSSLNLSADSKKQIHQICSPTRIS 300

Query: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPSSNKV 338
           GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTP SNK+
Sbjct: 301 GRGSGGVSNEGKKKRSEESSSETSTKKAKQDNSTPYSNKM 336

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL
Match: A0A6J1E2A3 (transcription factor bHLH111 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025348 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 3.40e-107
Identity = 223/373 (59.79%), Postives = 263/373 (70.51%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLS-YNSHWLLQNPNSNSSCEEDVS 60
           M +ECTESSVATS STP NWWD +HNHNHHHH  PSLS Y+SHW  QNPNSN+SC++DVS
Sbjct: 1   MGDECTESSVATS-STPPNWWD-SHNHNHHHHGSPSLSSYSSHWPHQNPNSNTSCDQDVS 60

Query: 61  ISTSSFTNA-----SNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISS 120
           +STSSF +A     S  L    PSDN  LWTQVLLNIGN VEL+S+E+ I  NFLE ISS
Sbjct: 61  LSTSSFHSALTVESSRRLFDPLPSDNQ-LWTQVLLNIGNGVELQSDEQEIGENFLEAISS 120

Query: 121 RSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTF--NTNNNNNNRLLTSHTHMLQ 180
           ++ +STTGIFES ACSDYLKKMDT  N NNNW+ +F  F  N NNNNNN L+T+H+H  +
Sbjct: 121 KN-ISTTGIFESAACSDYLKKMDT--NYNNNWN-SFPIFDANNNNNNNNGLITTHSHAAE 180

Query: 181 NERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTH----EILEPD-GTMP 240
           NER LKLS+LVN WSIALP          MDD+ DHLRA+T+P      +   P+ GT+ 
Sbjct: 181 NERLLKLSSLVNTWSIALP----------MDDEPDHLRAATVPCFGHGLKAEAPEAGTVA 240

Query: 241 HQGLDPCDSSFLR-----------------RSLQ-----NQNYGDYISFNGRLAKPVVGI 300
              L+P  + F R                  S+Q      +N+ DYISFNGRL KPV+ I
Sbjct: 241 PIRLEPGAALFRRSFGSGGFQNSIGAKQYDHSMQLDNAGTRNFADYISFNGRLGKPVINI 300

Query: 301 NGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKK 338
           NG  NNPCFKS LNLSAD+KKQIHQ  SPTRISGRGSG VS+EGKKKRSEE S ET+TKK
Sbjct: 301 NGI-NNPCFKS-LNLSADTKKQIHQTSSPTRISGRGSG-VSSEGKKKRSEECS-ETATKK 352

[Close]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL
Match: A0A6J1E0R5 (transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025348 PE=4 SV=1)

HSP 1 Score: 330 bits (847), Expect = 5.07e-107
Identity = 223/373 (59.79%), Postives = 263/373 (70.51%), Query Frame = 0


Query: 1   MAEECTESSVATSNSTPSNWWDINHNHNHHHHHHPSLS-YNSHWLLQNPNSNSSCEEDVS 60
           M +ECTESSVATS STP NWWD +HNHNHHHH  PSLS Y+SHW  QNPNSN+SC++DVS
Sbjct: 1   MGDECTESSVATS-STPPNWWD-SHNHNHHHHGSPSLSSYSSHWPHQNPNSNTSCDQDVS 60

Query: 61  ISTSSFTNA-----SNHLLPHHPSDNNHLWTQVLLNIGNDVELESNEENIEGNFLETISS 120
           +STSSF +A     S  L    PSDN  LWTQVLLNIGN VEL+S+E+ I  NFLE ISS
Sbjct: 61  LSTSSFHSALTVESSRRLFDPLPSDNQ-LWTQVLLNIGNGVELQSDEQEIGENFLEAISS 120

Query: 121 RSSMSTTGIFESTACSDYLKKMDTSNNDNNNWDDTFQTF--NTNNNNNNRLLTSHTHMLQ 180
           ++ +STTGIFES ACSDYLKKMDT  N NNNW+ +F  F  N NNNNNN L+T+H+H  +
Sbjct: 121 KN-ISTTGIFESAACSDYLKKMDT--NYNNNWN-SFPIFDANNNNNNNNGLITTHSHAAE 180

Query: 181 NERFLKLSNLVNRWSIALPNPDPHLRHLTMDDQHDHLRASTMPTH----EILEPD-GTMP 240
           NER LKLS+LVN WSIALP          MDD+ DHLRA+T+P      +   P+ GT+ 
Sbjct: 181 NERLLKLSSLVNTWSIALP----------MDDEPDHLRAATVPCFGHGLKAEAPEAGTVA 240

Query: 241 HQGLDPCDSSFLR-----------------RSLQ-----NQNYGDYISFNGRLAKPVVGI 300
              L+P  + F R                  S+Q      +N+ DYISFNGRL KPV+ I
Sbjct: 241 PIRLEPGAALFRRSFGSGGFQNSIGAKQYDHSMQLDNAGTRNFADYISFNGRLGKPVINI 300

Query: 301 NGSSNNPCFKSSLNLSADSKKQIHQICSPTRISGRGSGGVSNEGKKKRSEESSSETSTKK 338
           NG  NNPCFKS LNLSAD+KKQIHQ  SPTRISGRGSG VS+EGKKKRSEE S ET+TKK
Sbjct: 301 NGI-NNPCFKS-LNLSADTKKQIHQTSSPTRISGRGSG-VSSEGKKKRSEECS-ETATKK 352

The following BLAST results are available for this feature:

BLAST of Cucsat.G18696.T4 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYJ6	1.4e-04	33.33	Transcription factor bHLH111 OS=Arabidopsis thaliana OX=3702 GN=BHLH111 PE=2 SV=...	[more]

BLAST of Cucsat.G18696.T4 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140441.1	5.93e-239	99.70	transcription factor bHLH111 [Cucumis sativus] >XP_031741022.1 transcription fac...	[more]
KAA0046207.1	5.27e-215	92.92	transcription factor bHLH111 [Cucumis melo var. makuwa] >TYK14173.1 transcriptio...	[more]
XP_008460218.1	8.86e-215	92.65	PREDICTED: transcription factor bHLH111 [Cucumis melo]	[more]
XP_038877207.1	2.30e-176	81.79	transcription factor bHLH111 isoform X1 [Benincasa hispida]	[more]
XP_038877208.1	2.05e-155	81.13	transcription factor bHLH111 isoform X2 [Benincasa hispida]	[more]

BLAST of Cucsat.G18696.T4 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQW5	2.87e-239	99.70	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G269890 PE=4 S...	[more]
A0A5D3CQN9	2.55e-215	92.92	Transcription factor bHLH111 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CD90	4.29e-215	92.65	transcription factor bHLH111 OS=Cucumis melo OX=3656 GN=LOC103499104 PE=4 SV=1	[more]
A0A6J1E2A3	3.40e-107	59.79	transcription factor bHLH111 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1E0R5	5.07e-107	59.79	transcription factor bHLH111 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..323
None	No IPR available	PANTHER	PTHR16223:SF171	TRANSCRIPTION FACTOR BHLH111	coord: 42..337
None	No IPR available	PANTHER	PTHR16223	TRANSCRIPTION FACTOR BHLH83-RELATED	coord: 42..337

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G18696	Cucsat.G18696	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18696.T4.E1	Cucsat.G18696.T4.E1	exon
Cucsat.G18696.T4.E2	Cucsat.G18696.T4.E2	exon
Cucsat.G18696.T4.E3	Cucsat.G18696.T4.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18696.T4.C3	Cucsat.G18696.T4.C3	CDS
Cucsat.G18696.T4.C2	Cucsat.G18696.T4.C2	CDS
Cucsat.G18696.T4.C1	Cucsat.G18696.T4.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18696.T4	Cucsat.G18696.T4-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding