Cucsat.G18620.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G18620.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUbiquitin carboxyl-terminal hydrolase 36
Locationctg3379: 2342549 .. 2351556 (-)
RNA-Seq ExpressionCucsat.G18620.T3
SyntenyCucsat.G18620.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAAGGACAAAGGACGGAAGACAGAAGACGGAAGGCGGAAGACCCACGATAAGGTTAGTTAATTTAATTTTAACGTAACTGGTTCCGCACCGAACCGAACCGCTTCAGTTTGGTTCGGTTCGGTAATACTTGTTGTAAACCAGTTCAATTCGAACCGAGCTGGTTCGGTTCGGGTTTTTCAGCCCTAGTTAAACTAGGTCTTCCAAGCAATGTAGATTATTTTCCTTTTTGAAATTTAATAATAATAAGTTGAAATTAGATAACTCCTTAAAATATAGAACTCAAATACAACGGATGTTAATTGAGAATCTCAAGTTGAAAAGAGAAAAAACAATATCGAATGAAGAATTGCTTTATTCTTATTATTTGATATTTAGTTGTTTGTATCTACTTTAATTTTTTTTTTATAAAATGTATAATCTATCATCTTAAAATACAATTTATTTTGATGTTACAATGACTTTGTCACCTAACCCTCCACAAAGATGAGCTTCTCTTCATTCATGTGAGGTACCGATAAACCAAAATATCAAATTAGTGATGTTGGTTGTCTTTTTAACGTTGATACAAAGATATAATTAACTTTTTTTAAGACAAAAAGCATCTATCGAAAAAGATGAATTACAAAATTTCAAAGTGACATGGCTAGCGAATGAATTGTTTCCTACAACTATATATATAAATACCTTATCGAGAAAAATGGATAGCAATTTATGAGAGGTGATGGATTAGCAAATTACAATCTTGTTATTCATAAAAAATGGTTTCTTTAAAATTGCAAGCACATTCTCGAAAAAGATGAACATTGATTTTTTAAAATGGTATCGAAAAATACTAATAATAATATTCATAAATTAGTTTGGAATTAAAAAGAAGCTAATTATTAATAGAGGATTAAAAAAGAAACTTAATTATTAGCGTAAATAAAATTTATAAATTGCATGATTTATGAAACATCCGATTGAGATTAGGTTCCTACCCATTTTATCTGCAGAGTCTCTCTGAAAGCCACCCGTCGCCATTGCCATTTTATATGCACAGAACACAAGCTTTAGCTGGTCATCCCCCATTAGCAGCTGCAGAGGAAGAATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTGTTAAGTTCTCTGCCCCTTCTCCATCCTCCCTCAGTCTCTTACTTCTACTGGGTCTATACGTTTACCCGGTGCTCCACATGCCCACATGATGTTCGACGAAATTACTGTGAGAAAGTAGAAGTCATTTTAAGCTATTGAGTTGTGATTTACCATTGTTCGATTGATACTGCCCTGAATTTCATTTTTCTTGGTGATAGATTAAGTTTGTTTATTTTTGTTTTTTTATGGTAGCATTGGAAGCTTGTTTATGATAATTCAAGGGCATGAACTTACATTTTTCTTCTTCAATGGTTCAGTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTGTTTCTCGTCCTTTCAATGTGTTTTGACTAGCTGAGATTAGTGCTAGTTGATTTGTGATATGAAAATTGGATAGAAGAGATGTGTGTTTGAATCTTCACATTACGATTTCCTCTCAAATCATGCATATAGTTCACTCTTTGAGCTCCATTAATTAAATTAAATTAGTCTAACTTATCTTTAGAGTTTTGTGATAGTCTAACCTAGTATCTTTGGAGATACTATGTTCAAACATCTTTTAAGTTTTGGGGTTCCACAATAATTTAATTAAATTTGTTATGGTCGTCGCAAATTTTGAACTTCATCGTCTCATTGAACATGTTCTCCCTAAAAAATCCCCTTGCTTAAGGTGTTCATAATATCTATCCTAATACGGTCAAATTGATGGTTGGCTATTCAAATTTTATATATTTTTTGAAGCCGTCTGTTTGTACAATTATTTCTTAACTCCGGTTTATGTGTATTTGGTTCACAAAATTTTTAAAATTACACAAAACTCAAATTGCATAGAATGAATTTATAATTTAACTAGCTGGACTTTTGTGAAGAACTAATCTTCTAAATCATAAACTTGCATTAAATTTTTAACATTCATCTGACCTCTTGAGACTTAGAGGTAGGTTTCTACGTTAGTTGAGCGGGAAATTCAACTATTTATGTAATCACAATATTAACAGTTCCTTGTCAAATCCAAGAGGTTTTAGTTAGTTTGGCATGACATTAGAGTAAAAAGTGTTTGAATTCCTATCAGTTATTTTATGCTTAATTTGATATTGATCCGCACTCGTTGAGTTTTGTACTCAAAACTCAACTCACACAATAAAAAGTTAGTATTAATTGTATTTATAAACAAACTCACAAAATAATAAGTTAGTATTAATTGTATTTATAAACAGACATCTTAACATATTTACTTGAACTTTTGAATTTAGTAGTGATTTAACAGTGTTAACTATCTTAGTCCAACTATTTCAAGTTGTTGCATCACATCCCCATGTCATAATCATCCTAACATTTTACATATGTTGATGTTTTTATAACAGAATTGTTTTCGATGAGAGTAAGATGTCGATTAAATTAACGCATCCATTTTGATCATTTCCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGATAAGTATTTTGCAGGATAAACAAAAAGAAGTGTGGTCAAGAATGAAAATTGTGGAGTACTGAGACTAACTATTCAAGGGAGTTGATGGAACACCATTTTCTGCCATTATTTGTAAACTATTTGAATGTGGATGTAAGTGAAAATTATTATATTACATTTTTATTTGTTTTAGTGTTTCATATCTATTAAGTATAGCAACAAGTTGTGCTTCTCAGTTGAGTTATTTGATCTTGATTGTACCGAAGAATTGGTCCATGTTGTCCTCGGTTATGCAGCAACCACTTCTATCATATTCCAAATCACTTTTGATCGTGGTGTATGTTTCAAGAGTTTTTGAGTAGTTAATCAGTTTTGTTAAGTTTAAAATCACTCAAAAAGATCATCTTTAATCACCTAAAATGAATTTATTGTTTATTTGTATACTCTATAAATGTTAAACATTGAAGTTGACTTTGATTTTCTAAACGATCAAATTGAAAAATTACAAGACAGTTTTAATCATCTTAGAATCCCTTCTAACACATGATTTTATTAATCATTTAAGTTAATTCCTTGTTTAAGTTTATATATTCAAAAACTATTTTTTATATTATTCAAATTTGAATACTTGAAAGTATGGTTATTTTTCTGTTAACATTCTCTTTATCTTTTAACACGTCTAACAACATTCTCTTCCATCCTCATTTATGAACTTAATAAAAGATGTAACAAATATTAATCTTAATAAGAAAAAATAATCAAATTAAAATGTAAAGTCAACTAAATTAGTTTTCAGTACAAAAGTTAATTTAAATTGGTAGCAATATTGATTTAGATATCTAAAGATAGATTAAATTACAAAATTATCTCTGCATTGAAAAAGTTAGAATTTAGTTATAGTTTTAAAAATGGAAATTATTGTAAATTATTATTATTTTGCTTTCAAATATTGGATTAAATTAGCAATTTAATAATACAAAAATTATAAATTGATTTTTTTTTCTTTTCCAAAAAGGGTATTCACCACAAAAGCCGCGTGGCCGCTGCAATTGCTATTGCCTCCATTTCTCACTTCCAAGCAAAGCTCGCGATCTCTCTCTCATGGACTCTCTATTAGCCAACTACGCCTCCGACGACGACGAAGAAGAGCATCACCAACAACCGCCGCCGCACCCACCGTCGTCTATTAGCAACCCCCCGAGATCCGAGTTTTCAGAAACTTCCACCTTCAGAAGCTCATCTTTCTCCTCGTCTCTTCCCCCGCCTAAATCCTCCTCCCTCTTCCAATCCCTACCCCATCCCAAACAATCATCCAAGCCTTCTCTGCCCGCTGGTTTCTTCGACGGTGGTAAGAACGAAGACCTAGAAGAAGAAGATTCCTCCTCTGTGTCGAAATTTGGTGCCGCTTCAATTAAACCTTCCTCTCTATTCTCTTCCCTTCCACGGCCCAAGGGGAACCCTACGAACTCTTCGACTTCCGGTTCAAGTTCTCGATTTGATGGTGATGGTGATAGTGACGGGAATCTCACGAAATCAGTGTCTATGTTTTCTTCCCTTCCACAACCTAACTCACAGAAATTGCAGGAGCCTAAATCGAATCCTTCTTCCTCGTTGTCCCAGCCGAAAAGGGTCGTCCTATTTAAGCCCCCCGTTAACTCTTCTTTGATGAAATTGGGTGAAGAGGACGACGACGATGATGATGAAGAAGAAGAAGAAATAAGGCGCCGGAAGGCATCCCAGTCGTCGTTCCAAACCCCTTCTGTGACGTCGTTCTTGTCAAGCATTCCAGCGCCGAAGAACTCGGCAACGTTGGGAGTTGCTTCGAGCTTAGGTTCAGGGCGGAGGTCGATTATCGAAACGGAGGTTTCGTCTTCTGATGGTTTTAACGTAGTGAATGATTCGGGCAGCACTCAAAATATTGATCACAGTACCGAACACTACGATAGTTTTGTAAATTACAGTTCAGGTGTTGAGCAGAACGTTGCTAATCATAGGGAGAGCTATGAGAATGCTGCAACCTACAATTTCGGTACAGAACAGAATGCATGGAATCACGCAAGCTATGATAGTTATGGGAATTACCATTACAGCGTCGATCAAAATGTTGCTGGTGAACCACAGTCCGCCTCTACTGCAAGTAATGCTGGTGACCATGGAGGCTATGAGAGTTATGGTAACTATGGTGATCACATGCAATACGGTAGTGAAGCTTCCGGCCAGCCCACAATTGGGGACACTGAAAATGCTGTTAGAATACCTGAGAAGAGAAGAAGAAATGAAGTTCCATTAGAAATAGTTGAGGTGAAGCAGGATGAATTGATTAAGAATCGGCCGAGGCAGGACCAGGTCAAGTTAACTGGAATCGCTTTTGGTCCTTCTTACCAGGTATGTCAGTTAGGAATTCATGGCAAAATAACATACAATGAGGTTTTATGAGGTAGTTTATGTCTGGATCTTTTTTGAAATTTGCATTAGCAAGTCTATGTTCTTGGTTTAGTTTTCATATGTACATTGGCTGCTAGTATAGAAGATTAAAATGTGGCATCTAATGAAATATTGGAGCTACGTTAGGACACTGGATATTTATATTATATGACACCGAGAAGGTAAAACCACCATTCCATAGGGCTTTTATTTGGTTTTTATTTTTATGCGTAAATATTTAAGATTATCAGTTATGGGTTTAAATGTTGTTAGGTTAACCAATTGAATTGTGAGATTATTCAAGGTATGTGCAAGCTAGCTTGGGGATACTCATAAAATAAAGGAAACACTTTTATAATTAATGAAGTATCAAGAGGAAAATCTCCCAAAAAGTTAACTGGAGTTGTGCTTTCTCTCCGATTTGCATGGATGATCGAAATAGAATAGTTATAACAAAGGTAAATACCCAAAAAAGAATCATGGTATTCTCGTGGCTGTGCATATGAAGCAATATCTACAGTCAAGATTTTTTTTTTCCTTAATCACTTTTCATTGATGAAATGAAAAGTGACTAATGCTCAAATTACAATGATACATAATAAGAACTAGATTCAACTTTCCTTTGATTGGTCCTCCCCTAATTTATTGCTATTTATGATCAGTTATTAGAGCTTTACTCTTTCCTCTTTTTGTTTGCGAACTACTTCTGAATGACAGTACATGTCTCCTTAGTTACACTTTGGATGGCATACCTGCAAAAGGAATGCAAAGATTAACCTGAGACCTTTTCTATGGTTTCTCTAGCTTGAGAGGAGTTGAGATTTTTTTGGGGAGAAAAAGTCTAAAGCATTTTGGAAGAACATCATTGAAATAAGATACAAAAACAGAGATTTGGAAGCTTTCATCATATGGATTGTCCTTTTGGAGAACTTTATCATTGAGCGAAAAGATAAAAAAATTGGAGTTGTTGGATCACCTTCTTTGGAGTTGCAAGTTTGTGAGATTTGTGTAACTTTATGCTAGCTCGTTAGAAGACTTTTGACTATTAGAGAGGGGTAATGCACCTTCAGTATGCGGATGATACTTTCATCTTTGCTCTCAGGGTGATGAAAATCTTAGGGCTTGGTGGTGTCAATCTTTTCTTACTCTGTTCAAGCCTACCCCTCAATGCTGCCAAAACTTTTCTTATTGGAATTAATCTTTGTGATGAGGAGGTTGCTTCTAGAACTAGTGAGTTGGGTTGCAAAGTTGATAGATTACCTTTTGTTTACTCGGGGTCCTCTTGGTGGGAAGGTCGAAGCTAAGGAGGCTTAGGTTGCTCTTGAGGAGAAATTTAGAACTAAAATTGATAAGTGGCATGGATTGGTCCTTTCCAAAGGTGGTAAGCTTTCGCTCATTGGGTTCTTCAAAGTTTACCGTGTTACTTTTTCTCCTTATTGAAGACCCTGAAAGGTTTTATTTCTTGCGTGGAATAGCTAATCCGTGACTTTGTTTGGGGTGGTGGATCTGATAAACTGGCCTCCCATATTGTCAGTTGGAAGTGGACCTCTCTCCCCATAATTTACAGGGTTGGGAATCGGCTCTCTCAATCAGAAGAATTCTGCTCTCTTGATGGAAGTGGCTTTCAAGGTTTTGTCATGAATAAAAAGCGTTGCGGAGGAAATTGATTAGAGCTATTTACGACGTGGAGGAGCGTGGGTTGAGTTCTCTAAAGCCTAGAGACAAAGGCAGCCTCAGATTATGGAACGGCATTCTAAAACAAAATGAGCATTTTTTACCTTTGTTGATTTTGTGGTGGGTGATGGGAGGCACCTAAAGCTTTGGGGGGATAGGTGGTGTGCAACCCAGCCTCATGCTTCCCTGTACTGTGACATCTGCATTATTTCCTCAAAAAAGAATGTTGTGATGGCAGATTCTTGGGTTGATTCTAGTCAAGCTTAGGATCTTGGGTTGAGAAGGAGATTGTTTGATAGAGAAATTGGCAATTATATTGCTTTTGCTGACTAGAGCAAAGGACTGCTCGCAGTGGAGGTTGGAAGCTTCGGGCCAGTTTTCTAACAAGTCTACTTTCCTGAAGTTGACCAAGGGGGCTACTAAAGTTAGCCTTCTTTTGGTCAATCTTATTTGGAAAACGAAATTCCTAGAAAACGAGTTTTTCCTTTGGTCCCTTCCCTCACCTATAGAAGTCTCGACACCCAGGAAAGCTCCAAAGGAAGTTTCCTAATTGGAATCTTTCCCCTTCCTTAGGCCCGCATTGCCAGGAGGAGGCTGAGACTTTATCACCTTTTTTTACACCTGCAAGTTTGCACCCAAAGGGTGGTATAGGAATTTTGAGACCTTTGGGTTGGATGGCTGTCTCCCTTTGCGGGTCAATGGCTGGATGATGGAGGGTTTGTATGGTGGCAGCTTTTGTGGGTAAAAGGAAAAATTTTGTGGAGTTGTGCAACCCGTGCACTCTTGTGATTCTTTTTGGGCTCTTGTGCAGCATACAGCCTCTTGGTGGTGTACACACTACACAAAGTCATTCTTTAATTACAGCCTTCTCATGATTACCAACAGTTGGAAGGCGCTCATTTTATTATTATTATTATTTTTTCTTTTGGAGGGGGGGGGGGGGGGGGGGGGGACAAAATGATGTCTAAAATATGAATGCTTTGAGTAAGGTGCTATATTTCATTTTTTTTTCTCCATTGCACTGGTATGATTGTCTGCATTGCGTTTTCTGTAGCCTGCCTCAGCAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCACCAAATTACTTCGTTGTATTATGATATGAAGCAGAAAGAGACAGAACTAGCAGAGAGGCGTGCTAGAGGTCTACTAACAAAGGCTGAAACACAAGGAAAGTATGGCTGGTGACCCCTTCACTACAGTTGTATGTAAGTCATGTGCTTCACACAGGTGGCATGCTAAAATTCTTAAACATGCATGGTTTATATACGCAAATGTACACTTTATTGGTCTTAGTGCAATTGTGTAACTTGAATGGTTCATTGTATCTTTTTGCCACACGGTTTCTTCTATGTTTAAGAATGATGGATTTCAACACCTTCATTGAAATACAACGCTCATCTTGGAGGTTACGTTTTAAGCTTTGTTAGTTCTCTGTCTTTGAGTTATAGGACATCTGTGGTGTAGTAAACTTGAGAATGCTGGTTAATGTTGATAGTGGCGGTCTAAACGACTTGAAGGACATGTGGATTATTTTTTGTTGAGATAATGATCTTTCTGGTCACCGAGGTTGAGTGAGTTCTATTTGATCCTTGCGTTTCAAATTCTTGGCCTCTTTTCTTCATAGATTTAAATATTGTTCTATGATAGTTATACACTTGTTTTTTAAGGGGCAGCAGAAGAGAAGAAAACGATTTAGTCCAACGAGAGGGCTGACAAAAAGGAGTGAAAACCAGAGAAATGTAAAATGGATTGCCCGTGCAAGAAGCCCACAAAATAGGAAAACTAAATGAACCAACAATCCAAGGAACATAAAACCAAAGCACCCCAAAAGTGGAACAAAAACCAAGCCATTAACATCCACCAGTGATCCATAACAAAGTGACAAGAAACTGATACAAAGAGAAAAGCGAAAAAGGGTAAGGTATATTAAAGAGCCAGGATTTGTTTGTCAGACCCCTCTCAAAGCAAGTATGTAGCCTTTTCTCATATGAGATTGAGCATTCCAGATTTTGTATCACTCTATTTTTTTTTTGTTGCATCATCTGCTTTTTCTTTCTTT

Coding sequence (CDS)

ATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGA

Protein sequence

MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Homology
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BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP     TNVP +  ++ D LK  SK ++ +LGKPESYV + +NGG  I F  T+ PA +
Sbjct: 1   MPIFTFSTNVPSEN-ISVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G+L+S+GG+G   N   S+ + + L   L I G+R YI F D++ S+ GYNGSTF
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGSDVGYNGSTF 114

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BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-19
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN+P +++ +A  LK AS  V+K LGKPESYV I +NGG  +VF  +E+P A 
Sbjct: 1   MPYFTIDTNIPQNSISSA-FLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+F D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAFNGSTF 114

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match: O44786 (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 GN=MIF PE=3 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 7.8e-18
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN P D++ +A  LK A   V K LGKPESYV I +NGG P+VF  +E+P   
Sbjct: 1   MPYFTIDTNKPQDSISSA-FLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+  D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAFNGSTF 114

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-14
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   L TN+   T V +D L   S  V  IL KP SYV + +N    + F  + +PAA+
Sbjct: 1   MPIFTLNTNIKA-TDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G L+SIGG+ P  N   S+ + + L  KL I  +R YI F ++   + G+NG+TF
Sbjct: 61  GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVNLNGDDVGWNGTTF 114

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match: Q76BK2 (Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TNV  D+ V   +L D +K ++K  GKP  Y+ I +     + F  + +P A 
Sbjct: 1   MPVFTIRTNVCRDS-VPDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +G   N   +  + +IL  +L I  +R YI +YD+  +N G+NGSTF
Sbjct: 61  CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114

[Close]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match: XP_004146336.1 (macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hypothetical protein Csa_019914 [Cucumis sativus])

HSP 1 Score: 224 bits (571), Expect = 1.06e-73
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match: XP_008453554.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 223 bits (568), Expect = 3.04e-73
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match: XP_038879720.1 (macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 211 bits (537), Expect = 1.63e-68
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKA+SKILGKPESYVMILLNG TPIVFA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAISKILGKPESYVMILLNGSTPIVFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQID SRFYIKFYDVQ S FGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDSSRFYIKFYDVQASYFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match: XP_022134572.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 205 bits (521), Expect = 4.48e-66
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match: XP_007154708.1 (hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_027918400.1 macrophage migration inhibitory factor homolog [Vigna unguiculata] >ESW26702.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >ESW26703.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris])

HSP 1 Score: 200 bits (508), Expect = 4.31e-64
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match: A0A0A0LXE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.13e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match: A0A1S3BXB7 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103494235 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 1.47e-73
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match: A0A6J1BZZ0 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111006808 PE=3 SV=1)

HSP 1 Score: 205 bits (521), Expect = 2.17e-66
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match: V7CBI6 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.09e-64
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

[Close]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match: A0A6P6SI69 (macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC113691722 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.09e-64
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 0 

Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD+VVA+DILKDA+KAV+KI+GKPESYVMIL+NGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDSVVASDILKDATKAVAKIIGKPESYVMILVNGGVPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLSIDSSRFYIKFYDVQRSYFGFNGSTF 115

The following BLAST results are available for this feature:
BLAST of Cucsat.G18620.T3 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P817483.4e-2145.22Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P... [more]
P918503.2e-1944.35Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2... [more]
O447867.8e-1843.48Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 G... [more]
P815295.2e-1439.13Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P... [more]
Q76BK22.2e-1235.65Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=... [more]
BLAST of Cucsat.G18620.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004146336.11.06e-73100.00macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hyp... [more]
XP_008453554.13.04e-7398.26PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo][more]
XP_038879720.11.63e-6894.78macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida][more]
XP_022134572.14.48e-6690.43macrophage migration inhibitory factor homolog [Momordica charantia][more]
XP_007154708.14.31e-6488.70hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypo... [more]
BLAST of Cucsat.G18620.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXE05.13e-74100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1[more]
A0A1S3BXB71.47e-7398.26macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A6J1BZZ02.17e-6690.43macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN... [more]
V7CBI62.09e-6488.70Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 ... [more]
A0A6P6SI692.09e-6487.83macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014347Tautomerase/MIF superfamilyGENE3D3.30.429.10Macrophage Migration Inhibitory Factorcoord: 2..115
e-value: 7.8E-42
score: 144.3
IPR014347Tautomerase/MIF superfamilySUPERFAMILY55331Tautomerase/MIFcoord: 1..115
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 2..115
e-value: 6.9E-25
score: 87.6
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954D-DOPACHROME DECARBOXYLASEcoord: 1..115
NoneNo IPR availablePANTHERPTHR11954:SF42TAUTOMERASE/MIF SUPERFAMILY PROTEINcoord: 1..115

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G18620Cucsat.G18620gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18620.T3.E1Cucsat.G18620.T3.E1exon
Cucsat.G18620.T3.E2Cucsat.G18620.T3.E2exon
Cucsat.G18620.T3.E3Cucsat.G18620.T3.E3exon
Cucsat.G18620.T3.E4Cucsat.G18620.T3.E4exon
Cucsat.G18620.T3.E5Cucsat.G18620.T3.E5exon
Cucsat.G18620.T3.E6Cucsat.G18620.T3.E6exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18620.T3.C3Cucsat.G18620.T3.C3CDS
Cucsat.G18620.T3.C2Cucsat.G18620.T3.C2CDS
Cucsat.G18620.T3.C1Cucsat.G18620.T3.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G18620.T3Cucsat.G18620.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005615 extracellular space
cellular_component GO:0005634 nucleus
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0050178 phenylpyruvate tautomerase activity