Cucsat.G18620.T12 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G18620.T12
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ubiquitin carboxyl-terminal hydrolase 36
Location	ctg3379: 2348397 .. 2351629 (-)
RNA-Seq Expression	Cucsat.G18620.T12
Synteny	Cucsat.G18620.T12

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATTTTAATTAGAATAACTGGTAAACCCAAAACGGCGGTGGAGACTGGAGCATAGATACAGAGAACGAGACGGAAGGACAAAGGACGGAAGACAGAAGACGGAAGGCGGAAGACCCACGATAAGGTTAGTTAATTTAATTTTAACGTAACTGGTTCCGCACCGAACCGAACCGCTTCAGTTTGGTTCGGTTCGGTAATACTTGTTGTAAACCAGTTCAATTCGAACCGAGCTGGTTCGGTTCGGGTTTTTCAGCCCTAGTTAAACTAGGTCTTCCAAGCAATGTAGATTATTTTCCTTTTTGAAATTTAATAATAATAAGTTGAAATTAGATAACTCCTTAAAATATAGAACTCAAATACAACGGATGTTAATTGAGAATCTCAAGTTGAAAAGAGAAAAAACAATATCGAATGAAGAATTGCTTTATTCTTATTATTTGATATTTAGTTGTTTGTATCTACTTTAATTTTTTTTTTATAAAATGTATAATCTATCATCTTAAAATACAATTTATTTTGATGTTACAATGACTTTGTCACCTAACCCTCCACAAAGATGAGCTTCTCTTCATTCATGTGAGGTACCGATAAACCAAAATATCAAATTAGTGATGTTGGTTGTCTTTTTAACGTTGATACAAAGATATAATTAACTTTTTTTAAGACAAAAAGCATCTATCGAAAAAGATGAATTACAAAATTTCAAAGTGACATGGCTAGCGAATGAATTGTTTCCTACAACTATATATATAAATACCTTATCGAGAAAAATGGATAGCAATTTATGAGAGGTGATGGATTAGCAAATTACAATCTTGTTATTCATAAAAAATGGTTTCTTTAAAATTGCAAGCACATTCTCGAAAAAGATGAACATTGATTTTTTAAAATGGTATCGAAAAATACTAATAATAATATTCATAAATTAGTTTGGAATTAAAAAGAAGCTAATTATTAATAGAGGATTAAAAAAGAAACTTAATTATTAGCGTAAATAAAATTTATAAATTGCATGATTTATGAAACATCCGATTGAGATTAGGTTCCTACCCATTTTATCTGCAGAGTCTCTCTGAAAGCCACCCGTCGCCATTGCCATTTTATATGCACAGAACACAAGCTTTAGCTGGTCATCCCCCATTAGCAGCTGCAGAGGAAGAATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTGTTAAGTTCTCTGCCCCTTCTCCATCCTCCCTCAGTCTCTTACTTCTACTGGGTCTATACGTTTACCCGGTGCTCCACATGCCCACATGATGTTCGACGAAATTACTGTGAGAAAGTAGAAGTCATTTTAAGCTATTGAGTTGTGATTTACCATTGTTCGATTGATACTGCCCTGAATTTCATTTTTCTTGGTGATAGATTAAGTTTGTTTATTTTTGTTTTTTTATGGTAGCATTGGAAGCTTGTTTATGATAATTCAAGGGCATGAACTTACATTTTTCTTCTTCAATGGTTCAGTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTGTTTCTCGTCCTTTCAATGTGTTTTGACTAGCTGAGATTAGTGCTAGTTGATTTGTGATATGAAAATTGGATAGAAGAGATGTGTGTTTGAATCTTCACATTACGATTTCCTCTCAAATCATGCATATAGTTCACTCTTTGAGCTCCATTAATTAAATTAAATTAGTCTAACTTATCTTTAGAGTTTTGTGATAGTCTAACCTAGTATCTTTGGAGATACTATGTTCAAACATCTTTTAAGTTTTGGGGTTCCACAATAATTTAATTAAATTTGTTATGGTCGTCGCAAATTTTGAACTTCATCGTCTCATTGAACATGTTCTCCCTAAAAAATCCCCTTGCTTAAGGTGTTCATAATATCTATCCTAATACGGTCAAATTGATGGTTGGCTATTCAAATTTTATATATTTTTTGAAGCCGTCTGTTTGTACAATTATTTCTTAACTCCGGTTTATGTGTATTTGGTTCACAAAATTTTTAAAATTACACAAAACTCAAATTGCATAGAATGAATTTATAATTTAACTAGCTGGACTTTTGTGAAGAACTAATCTTCTAAATCATAAACTTGCATTAAATTTTTAACATTCATCTGACCTCTTGAGACTTAGAGGTAGGTTTCTACGTTAGTTGAGCGGGAAATTCAACTATTTATGTAATCACAATATTAACAGTTCCTTGTCAAATCCAAGAGGTTTTAGTTAGTTTGGCATGACATTAGAGTAAAAAGTGTTTGAATTCCTATCAGTTATTTTATGCTTAATTTGATATTGATCCGCACTCGTTGAGTTTTGTACTCAAAACTCAACTCACACAATAAAAAGTTAGTATTAATTGTATTTATAAACAAACTCACAAAATAATAAGTTAGTATTAATTGTATTTATAAACAGACATCTTAACATATTTACTTGAACTTTTGAATTTAGTAGTGATTTAACAGTGTTAACTATCTTAGTCCAACTATTTCAAGTTGTTGCATCACATCCCCATGTCATAATCATCCTAACATTTTACATATGTTGATGTTTTTATAACAGAATTGTTTTCGATGAGAGTAAGATGTCGATTAAATTAACGCATCCATTTTGATCATTTCCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGATAAGTATTTTGCAGGATAAACAAAAAGAAGTGTGGTCAAGAATGAAAATTGTGGAGTACTGAGACTAACTATTCAAGGGAGTTGATGGAACACCATTTTCTGCCATTATTTGTAAACTATTTGAATGTGGATGTAAGTGAAAATTATTATATTACATTTTTATTTGTTTTAGTGTTTCATATCTATTAAGTATAGCAACAAGTTGTGCTTCTCAGTTGAGTTATTTGATCTTGATTGTACCGAAGAATTGGTCCATGTTGTCCTCGGTTATGCAGCAACCACTTCTATCATATTCCAAATCACTTTTGATCGTGGT

Coding sequence (CDS)

ATGCCGACTTTGAATTTATTCACGAATGTTCCAGTTGATACTGTTGTCGCCGCTGACATCCTCAAGGACGCTTCGAAAGCCGTTTCTAAAATTCTCGGCAAACCTGAATCTTATGTGATGATCTTGCTGAATGGTGGCACTCCAATTGTATTTGCTACGACAGAAGAGCCAGCCGCGTATGGAGAATTGATCTCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCAAATTGATGGTTCACGTTTCTATATCAAATTTTATGACGTTCAGCGCTCAAACTTCGGGTACAACGGCTCAACATTTTGA

Protein sequence

MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF

Homology

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot
Match: P81748 (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 PE=1 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 3.4e-21
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP     TNVP +  ++ D LK  SK ++ +LGKPESYV + +NGG  I F  T+ PA +
Sbjct: 1   MPIFTFSTNVPSEN-ISVDFLKSTSKLIAGMLGKPESYVAVHINGGQKITFGGTDAPAGF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G+L+S+GG+G   N   S+ + + L   L I G+R YI F D++ S+ GYNGSTF
Sbjct: 61  GQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMYINFVDMRGSDVGYNGSTF 114

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot
Match: P91850 (Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 95.9 bits (237), Expect = 3.2e-19
Identity = 51/115 (44.35%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN+P +++ +A  LK AS  V+K LGKPESYV I +NGG  +VF  +E+P A 
Sbjct: 1   MPYFTIDTNIPQNSISSA-FLKKASNVVAKALGKPESYVSIHVNGGQAMVFGGSEDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+F D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIEFVDIEASSMAFNGSTF 114

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot
Match: O44786 (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 GN=MIF PE=3 SV=3)

HSP 1 Score: 91.3 bits (225), Expect = 7.8e-18
Identity = 50/115 (43.48%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TN P D++ +A  LK A   V K LGKPESYV I +NGG P+VF  +E+P   
Sbjct: 1   MPYFTIDTNKPQDSISSA-FLKKAPNVVPKALGKPESYVSIHVNGGQPMVFGGSEDPCPV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +GP VN   +  + ++L  +L+I  +R YI+  D++ S+  +NGSTF
Sbjct: 61  CVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCYIESVDIEASSMAFNGSTF 114

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot
Match: P81529 (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 PE=1 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-14
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   L TN+   T V +D L   S  V  IL KP SYV + +N    + F  + +PAA+
Sbjct: 1   MPIFTLNTNIKA-TDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTKPAAF 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
           G L+SIGG+ P  N   S+ + + L  KL I  +R YI F ++   + G+NG+TF
Sbjct: 61  GTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMYIHFVNLNGDDVGWNGTTF 114

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot
Match: Q76BK2 (Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-12
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MP   + TNV  D+ V   +L D +K ++K  GKP  Y+ I +     + F  + +P A 
Sbjct: 1   MPVFTIRTNVCRDS-VPDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAV 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 116
             L SIG +G   N   +  + +IL  +L I  +R YI +YD+  +N G+NGSTF
Sbjct: 61  CSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114

[Close]

BLAST of Cucsat.G18620.T12 vs. NCBI nr
Match: XP_004146336.1 (macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hypothetical protein Csa_019914 [Cucumis sativus])

HSP 1 Score: 224 bits (571), Expect = 1.06e-73
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. NCBI nr
Match: XP_008453554.1 (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 223 bits (568), Expect = 3.04e-73
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. NCBI nr
Match: XP_038879720.1 (macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 211 bits (537), Expect = 1.63e-68
Identity = 109/115 (94.78%), Postives = 110/115 (95.65%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKA+SKILGKPESYVMILLNG TPIVFA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAISKILGKPESYVMILLNGSTPIVFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQID SRFYIKFYDVQ S FGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDSSRFYIKFYDVQASYFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. NCBI nr
Match: XP_022134572.1 (macrophage migration inhibitory factor homolog [Momordica charantia])

HSP 1 Score: 205 bits (521), Expect = 4.48e-66
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. NCBI nr
Match: XP_007154708.1 (hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_027918400.1 macrophage migration inhibitory factor homolog [Vigna unguiculata] >ESW26702.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >ESW26703.1 hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris])

HSP 1 Score: 200 bits (508), Expect = 4.31e-64
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL
Match: A0A0A0LXE0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1)

HSP 1 Score: 224 bits (571), Expect = 5.13e-74
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL
Match: A0A1S3BXB7 (macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103494235 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 1.47e-73
Identity = 113/115 (98.26%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPI+FATTEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIIFATTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGPGVNGKLSSTIAEILQTK+QIDGSRFYIKFYDVQRSNFGYNGSTF
Sbjct: 61  GELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFYIKFYDVQRSNFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL
Match: A0A6J1BZZ0 (macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN=LOC111006808 PE=3 SV=1)

HSP 1 Score: 205 bits (521), Expect = 2.17e-66
Identity = 104/115 (90.43%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD VVAADILKDA+KAVSKI+GKPE+YVMILLNGGTPI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDAVVAADILKDATKAVSKIIGKPEAYVMILLNGGTPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL IDGSRFYIKFYD +RS FGYNGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLHIDGSRFYIKFYDAERSYFGYNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL
Match: V7CBI6 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.09e-64
Identity = 102/115 (88.70%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVDTVVA+DIL+DA+KAV+KI+GKPESYVMILLNGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPESYVMILLNGGVPIEFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFYIKFYDVQRSFFGFNGSTF 115

[Close]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL
Match: A0A6P6SI69 (macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC113691722 PE=3 SV=1)

HSP 1 Score: 200 bits (508), Expect = 2.09e-64
Identity = 101/115 (87.83%), Postives = 108/115 (93.91%), Query Frame = 0


Query: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPESYVMILLNGGTPIVFATTEEPAAY 60
           MPTLNLFTNVPVD+VVA+DILKDA+KAV+KI+GKPESYVMIL+NGG PI FA TEEPAAY
Sbjct: 1   MPTLNLFTNVPVDSVVASDILKDATKAVAKIIGKPESYVMILVNGGVPIAFAGTEEPAAY 60

Query: 61  GELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFYIKFYDVQRSNFGYNGSTF 115
           GELISIGGLGP VNGKLSSTIAEILQTKL ID SRFYIKFYDVQRS FG+NGSTF
Sbjct: 61  GELISIGGLGPSVNGKLSSTIAEILQTKLSIDSSRFYIKFYDVQRSYFGFNGSTF 115

The following BLAST results are available for this feature:

BLAST of Cucsat.G18620.T12 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81748	3.4e-21	45.22	Macrophage migration inhibitory factor homolog OS=Trichuris trichiura OX=36087 P...	[more]
P91850	3.2e-19	44.35	Macrophage migration inhibitory factor homolog OS=Brugia malayi OX=6279 GN=Bm1_2...	[more]
O44786	7.8e-18	43.48	Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti OX=6293 G...	[more]
P81529	5.2e-14	39.13	Macrophage migration inhibitory factor homolog OS=Trichinella spiralis OX=6334 P...	[more]
Q76BK2	2.2e-12	35.65	Macrophage migration inhibitory factor OS=Xenopus laevis OX=8355 GN=mif PE=1 SV=...	[more]

BLAST of Cucsat.G18620.T12 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146336.1	1.06e-73	100.00	macrophage migration inhibitory factor homolog [Cucumis sativus] >KGN65487.1 hyp...	[more]
XP_008453554.1	3.04e-73	98.26	PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo]	[more]
XP_038879720.1	1.63e-68	94.78	macrophage migration inhibitory factor homolog isoform X1 [Benincasa hispida]	[more]
XP_022134572.1	4.48e-66	90.43	macrophage migration inhibitory factor homolog [Momordica charantia]	[more]
XP_007154708.1	4.31e-64	88.70	hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris] >XP_007154709.1 hypo...	[more]

BLAST of Cucsat.G18620.T12 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE0	5.13e-74	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425910 PE=3 SV=1	[more]
A0A1S3BXB7	1.47e-73	98.26	macrophage migration inhibitory factor homolog OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1BZZ0	2.17e-66	90.43	macrophage migration inhibitory factor homolog OS=Momordica charantia OX=3673 GN...	[more]
V7CBI6	2.09e-64	88.70	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G141000g PE=3 ...	[more]
A0A6P6SI69	2.09e-64	87.83	macrophage migration inhibitory factor homolog OS=Coffea arabica OX=13443 GN=LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014347	Tautomerase/MIF superfamily	GENE3D	3.30.429.10	Macrophage Migration Inhibitory Factor	coord: 2..115 e-value: 7.8E-42 score: 144.3
IPR014347	Tautomerase/MIF superfamily	SUPERFAMILY	55331	Tautomerase/MIF	coord: 1..115
IPR001398	Macrophage migration inhibitory factor	PFAM	PF01187	MIF	coord: 2..115 e-value: 6.9E-25 score: 87.6
IPR001398	Macrophage migration inhibitory factor	PANTHER	PTHR11954	D-DOPACHROME DECARBOXYLASE	coord: 1..115
None	No IPR available	PANTHER	PTHR11954:SF42	TAUTOMERASE/MIF SUPERFAMILY PROTEIN	coord: 1..115

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G18620	Cucsat.G18620	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18620.T12.E1	Cucsat.G18620.T12.E1	exon
Cucsat.G18620.T12.E2	Cucsat.G18620.T12.E2	exon
Cucsat.G18620.T12.E3	Cucsat.G18620.T12.E3	exon
Cucsat.G18620.T12.E4	Cucsat.G18620.T12.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18620.T12.C3	Cucsat.G18620.T12.C3	CDS
Cucsat.G18620.T12.C2	Cucsat.G18620.T12.C2	CDS
Cucsat.G18620.T12.C1	Cucsat.G18620.T12.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G18620.T12	Cucsat.G18620.T12-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0050178	phenylpyruvate tautomerase activity