Cucsat.G18548.T1 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G18548.T1
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description40S ribosomal protein S15a
Locationctg3379: 640035 .. 641974 (-)
RNA-Seq ExpressionCucsat.G18548.T1
SyntenyCucsat.G18548.T1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCAATTTATAATGCTCTCCAAACCCTACGCCCATTCTTTGAAGCCGACGCCTCCATCTTCCATTCAGGTATATCTCCTCGCTAGGGTTCTCCCGTTTTTTCGTGCTCTTCTTATTGTGTATTTTGTTTTGATTTTTTTTCTTCTTCTGGATTTTGTTTCTGTTTTACTTTTGTTAGAAATCCATTGAAGTTTTAATTTGGAAGGATGGTGAGAGTTAGTGTTTTGAACGATGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGAAAACGACAGGTCATGATCAGGCCGTCTTCTAAAGTCATCATCAAGTTTCTTCTGGTTATGCAGAAGCACGGTTTGTTTCTTTGATTTGACTTCATCTTTGCAATTTCTTTTCTCTACGTCATCTCATCTCATCTTCTGTTTTTTGATGTTTAGGTTATATTGGTGAATTTGAGTTTGTCGATGATCATAGATCTGGAAAAATTGTTGTTGAACTCAACGGCAGGCTGAACAAATGTGGGGTTATTAGTCCTCGTTTTGATGTGGGTGTTAAGGAAATTGAAGGTTGGACTGCTAGGTTGCTCCCTTCCAGACAGGTTAGTGCGTAATACCTTTCACTTTTGTGAAATGCGATTGTGAAATTTAGGGATTTCAATGGAGATGTCAATAGTTGTTAAATGATCTTGTCATTTAGATTGTCTTAGATTCTAAATCTGGCTAGTTGGATATCGTAGTAGATGCACATGAAAGAGTAGTATGAATGCTTATCCATTGATTAACAAGTGCTCTGAAGTGGCTGCTTAGTTTTGCGAACGTTTAAACCCACATTTTTTAAAGCTCGAAACATAACAAGGCGCAATAGTCTTATGTGAAGCATGCATGCTCCGTAAATGGAGTAAACGCGAGTAAGCATGGTTGGGGTGGAAATGTGAAATAAAAAGCCCCAACCACAATTTTTTAATCTTTGTTAATGCAACAAGCCTACTTTGGGATGGTTCTGTGGTCGTCCAGAGGGCTTTTAAAATACTAGTTTAGATAAAAGTTTGGACTATTTTACTTTTGAATTATCTTTTATTTTCCATTGGAGGTGCAGGCTATGTAAAGATTTGTTTAGTAACATGATTTTTCAATATATGGTAATGATCTGTTTGATGAAATTCATAATATGCAGTTTGGATTCATTGTGCTGACAACATCTGCTGGAATTATGGATCACGAAGAAGCAAGAAGGAAGAATGTTGGAGGCAAAGTTCTTGGTTTCTTCTACTGAACATGGTTTTGAGCATCCATTATGGAGTTTTGACATAGCTTTCAAATAGTACTACATTTTCTCTCGGTAAAGAAAGATCCTTATCCTGTATTGATGATTAGATTTTGTGTTGCCAGTTTCTCATTTCTTAAGTTAATTCCAAGGAAGATTCTATTGTTTTCGTGAAGACGTTTTGGTTCTTTTAATTATATTGGAAGAGAACTAGTGCTTTTTAATTTCTTGCTACCTACTCTCCCAACTCTGTTTTCTGTCACTTGTGTTTTCAAGTTCAATAATAGTTATCTGAGAGACACCCGGAGCAGCAGCCCTTTTTAAAGCTTTACTCAAACTTGTAGAAATGTTATAATTTGGAGTCTTAGACTTGCACAGTTGTTTTAGAAATTAGACTGCAATGGATAAAAATTGAGCCCTAAAGCTTGAACCGAACAATTGTCACAATTTCTACCTTGTACAAGTTTCAGGGTTTAATTTTAATACTAGTATAGGTTTGAGGTGCTTTAGGGATGGTCTTTTGCAAGTTGACGTATTTGTTCCATTGTGAATGATCCAAACATACTCGGGATGATAGATCATTGCATTGAATTTCTATGCTGCCCTTGTAATGTTGATTCAAACATACTCGGGATGATAGATCATTGTAATCACATTTCGGATTCTCTTGTGAAAATTGAAATACTTTCAATG

Coding sequence (CDS)

ATGGTGAGAGTTAGTGTTTTGAACGATGCTCTTAAGAGCATGTACAATGCAGAGAAGAGGGGAAAACGACAGGTCATGATCAGGCCGTCTTCTAAAGTCATCATCAAGTTTCTTCTGGTTATGCAGAAGCACGGTTATATTGGTGAATTTGAGTTTGTCGATGATCATAGATCTGGAAAAATTGTTGTTGAACTCAACGGCAGGCTGAACAAATGTGGGGTTATTAGTCCTCGTTTTGATGTGGGTGTTAAGGAAATTGAAGGTTGGACTGCTAGGTTGCTCCCTTCCAGACAGTTTGGATTCATTGTGCTGACAACATCTGCTGGAATTATGGATCACGAAGAAGCAAGAAGGAAGAATGTTGGAGGCAAAGTTCTTGGTTTCTTCTACTGA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY
Homology
[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 262.3 bits (669), Expect = 2.9e-69
Identity = 126/130 (96.92%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 261.9 bits (668), Expect = 3.8e-69
Identity = 126/130 (96.92%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 260.8 bits (665), Expect = 8.4e-69
Identity = 125/130 (96.15%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 257.7 bits (657), Expect = 7.1e-68
Identity = 124/130 (95.38%), Postives = 129/130 (99.23%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 244.6 bits (623), Expect = 6.2e-64
Identity = 117/130 (90.00%), Postives = 124/130 (95.38%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFE+VDDHRSGK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFG+IVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 121 VGGKVLGFFY 131
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match: XP_004144630.1 (40S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_008465450.1 PREDICTED: 40S ribosomal protein S15a-1 [Cucumis melo] >XP_011657911.1 40S ribosomal protein S15a-1 [Cucumis sativus] >XP_038893650.1 40S ribosomal protein S15a-1 [Benincasa hispida] >XP_038897125.1 40S ribosomal protein S15a-1 [Benincasa hispida] >KAA0033910.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >BAA89231.1 wrp15a [Citrullus lanatus] >KAA0052378.1 40S ribosomal protein S15a-1 [Cucumis melo var. makuwa] >KAE8649788.1 hypothetical protein Csa_011988 [Cucumis sativus] >KAE8653230.1 hypothetical protein Csa_019672 [Cucumis sativus])

HSP 1 Score: 263 bits (673), Expect = 8.89e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match: KAG5557696.1 (hypothetical protein RHGRI_007820 [Rhododendron griersonianum])

HSP 1 Score: 263 bits (673), Expect = 1.58e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 18  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 77

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 78  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 137

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 138 VGGKVLGFFY 147

[Close]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match: KAE9451430.1 (hypothetical protein C3L33_16699, partial [Rhododendron williamsianum] >KAG5533434.1 hypothetical protein RHGRI_027562 [Rhododendron griersonianum])

HSP 1 Score: 263 bits (671), Expect = 1.79e-88
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match: KAF7148267.1 (hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii])

HSP 1 Score: 263 bits (673), Expect = 1.81e-88
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 22  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 81

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 82  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 141

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 142 VGGKVLGFFY 151

[Close]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match: XP_014518151.1 (40S ribosomal protein S15a-1 [Vigna radiata var. radiata])

HSP 1 Score: 262 bits (670), Expect = 2.55e-88
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match: A0A1S3CPB7 (40S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1)

HSP 1 Score: 263 bits (673), Expect = 4.30e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match: A0A5A7SSH5 (40S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00840 PE=3 SV=1)

HSP 1 Score: 263 bits (673), Expect = 4.30e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match: Q9SBL9 (Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1)

HSP 1 Score: 263 bits (673), Expect = 4.30e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match: A0A6A4L076 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_16699 PE=3 SV=1)

HSP 1 Score: 263 bits (671), Expect = 8.69e-89
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEFVDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEFVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

[Close]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match: A0A6J1BY30 (40S ribosomal protein S15a-1 OS=Momordica charantia OX=3673 GN=LOC111006763 PE=3 SV=1)

HSP 1 Score: 262 bits (670), Expect = 1.23e-88
Identity = 129/130 (99.23%), Postives = 130/130 (100.00%), Query Frame = 0 

Query: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEFVDDHRSGK 60
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE+VDDHRSGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRSGK 60

Query: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 121 VGGKVLGFFY 130
           VGGKVLGFFY
Sbjct: 121 VGGKVLGFFY 130

The following BLAST results are available for this feature:
BLAST of Cucsat.G18548.T1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P427982.9e-6996.9240S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=... [more]
Q9LX883.8e-6996.9240S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=... [more]
Q003328.4e-6996.1540S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3[more]
Q9AT347.1e-6895.3840S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3[more]
O806466.2e-6490.0040S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=... [more]
BLAST of Cucsat.G18548.T1 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144630.18.89e-89100.0040S ribosomal protein S15a-1 [Cucumis sativus] >XP_008457542.1 PREDICTED: 40S ri... [more]
KAG5557696.11.58e-88100.00hypothetical protein RHGRI_007820 [Rhododendron griersonianum][more]
KAE9451430.11.79e-8899.23hypothetical protein C3L33_16699, partial [Rhododendron williamsianum] >KAG55334... [more]
KAF7148267.11.81e-88100.00hypothetical protein RHSIM_Rhsim03G0129000 [Rhododendron simsii][more]
XP_014518151.12.55e-8899.2340S ribosomal protein S15a-1 [Vigna radiata var. radiata][more]
BLAST of Cucsat.G18548.T1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CPB74.30e-89100.0040S ribosomal protein S15a-1 OS=Cucumis melo OX=3656 GN=LOC103503055 PE=3 SV=1[more]
A0A5A7SSH54.30e-89100.0040S ribosomal protein S15a-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
Q9SBL94.30e-89100.00Wrp15a OS=Citrullus lanatus OX=3654 GN=wrp15a PE=2 SV=1[more]
A0A6A4L0768.69e-8999.23Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3... [more]
A0A6J1BY301.23e-8899.2340S ribosomal protein S15a-1 OS=Momordica charantia OX=3673 GN=LOC111006763 PE=3... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1490.10coord: 70..130
e-value: 1.2E-36
score: 126.1
NoneNo IPR availableGENE3D3.30.1370.30coord: 1..69
e-value: 8.4E-36
score: 123.7
NoneNo IPR availablePANTHERPTHR11758:SF39OS02G0478600 PROTEINcoord: 1..130
IPR000630Ribosomal protein S8PFAMPF00410Ribosomal_S8coord: 7..130
e-value: 1.1E-21
score: 77.1
IPR000630Ribosomal protein S8PANTHERPTHR1175840S RIBOSOMAL PROTEIN S15Acoord: 1..130
IPR000630Ribosomal protein S8PROSITEPS00053RIBOSOMAL_S8coord: 100..117
IPR000630Ribosomal protein S8HAMAPMF_01302_ARibosomal_S8_Acoord: 2..130
score: 32.288784
IPR035987Ribosomal protein S8 superfamilySUPERFAMILY56047Ribosomal protein S8coord: 4..130

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G18548Cucsat.G18548gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18548.T1.E1Cucsat.G18548.T1.E1exon
Cucsat.G18548.T1.E2Cucsat.G18548.T1.E2exon
Cucsat.G18548.T1.E3Cucsat.G18548.T1.E3exon
Cucsat.G18548.T1.E4Cucsat.G18548.T1.E4exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18548.T1.C3Cucsat.G18548.T1.C3CDS
Cucsat.G18548.T1.C2Cucsat.G18548.T1.C2CDS
Cucsat.G18548.T1.C1Cucsat.G18548.T1.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G18548.T1Cucsat.G18548.T1-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome