Cucsat.G18544.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G18544.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionCCT domain-containing protein
Locationctg3379: 459121 .. 461162 (-)
RNA-Seq ExpressionCucsat.G18544.T3
SyntenyCucsat.G18544.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCTTCTCCCTCCTCCTTCTTCCCTCCGCCACCACATCATGCATAGCTTCTCCCCCGCCGTTGACACCTCCATCTTTCACCTCCACTCCCCCGACCTCATCGTGTCCCCCCCACTTTTTCCATCATTCCCTAACTTCTCATCTTCTCATTCCTCTTCCTTTCTCCTAGCATACAGCCAGCTCGCTCTGAACCCGGTGCTCGAGTCACCTGAGCTTTTACCCTCAGAGGTGATCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACGTCATCGCAACCTTCCCTAATACAGCGGAGCATGAGTAGCCAGTCGCTCCAAAAGGATAGGGTAAGGCATGGACCGGGTGCTAGGATTTCCTCGTTAATCGACACGGATATGCCGGCCGTGAGAAGGGTTTACAGCTCCGGTGATTTGCAGGTGAACCCCAAAATTTGGCTGCAAAATTCTAGTGTTTCATTATTCTTTCGCACTTAAGACATTGCATCTTAACAACAATTGTCTTTGAGAATCATATGATCTTTATAAAATCATAGTCAAACACACCAATTATTTCTCCCATATTTTGTTAAATAAATTTTACAATATGAAAAAAATATAATGGTATAATTCATATATGTTCTGAAATCTATTTCTTTTACCATTAAGTAAAAAATATATTTCTCTTGTAAATAGAAAAGATTATACTGAAAAAATTGATATGAAATAATTCAGGGAAGAACAGAAAGAGGGTGCTCAAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTAGATATAGTCCTGAAGAGAAGAGAGAGAGAATTGAAAGATATAAAACCAAAAGAAATCAAAGGAATTTTAATAAGAAGATCAAGGTAATTATTTATTTTTCAATTATTTCTTTATTATTATTCAACGAGTTTAAATTTGTGGTTCCTAAGCTTTCATAATAGTTGTGTCTAATAAATCATTCAGGAAGTTTAAACTCATCAAATAATTAAACTTATGAACTTCTTTTAATACTGTGTTTAATAGATTCAATAGATTCATGAATTTTAAAAATAAAAGACTCTTTTAGAGAACAAATTTAAAAATCTATTAACCTCTTAGACTGGAAATTAAAATTACTACAAATCTATTATAAACATTCCAAAGTTTAAAACATATTTGGCACAGTTGAATAATTAAACTTAAAACTTAACCTATTCTCTTATTAAAAAAAACTATTTCTTCTTCTTTCCCTGCTTTCTTTTTCCTTTCTACTTTTACGTAAACTATTACTACTATAAACAAATAAATTATAACTGGGATATAATTGAGATTAACTACTAATTATTTTTAGAATTATTTGTATAATGTAACGTATATTTTCATAATTAAAAATAATTCTATTTCATATAGTCATCTACAAAGATATATCGTAATAGACCATATTAGGTGTATTAATAATCTATTGAATAATGAGACTATGACCCTCAAATTTTGAGTTTGAGTTTAAAATATAACTAAGTAGGCAAATAATTAGTGCTTTTTTTTGCTACATGAATATGGTTTAGAAAAAGAAGAAATAAGGACAAGACATTTCTAAAATAATTGAGGCATTTTGGAAGTTAAAAGACAAAGTGGACTGAAAAATGATTGTGGATAGGGTTTCTATTCATATGTAGCTAACAATAGTGATATGTTATTTTTCTACTCCAATCACATTTTTAATTCGATTTTTTTTAGTTGCCTCTATTTTTCGATTTTGTTTTAACAACTTCTAAATATTTTACATTTGTATCAAATAGGTCATTCAACCTATTGAACTATTTTAAAAGTTTGTAAACTTAAAGGACATATAATAATTAATTTAACAGTAATTTTATTTACATTTTCATGATTAATCTCTTTAGTCAAACTTTAGTTTTTTTTTTTTAATGGAAATTGACAAGTTTTCTTAATTATTTTTATCTATAGTTAAGGTTATATATCTAATCATTTGTTATATAATTTAATAGTATGAATGTAGAAAAACATTGGCCGATAGTAGAAGACGAA

Coding sequence (CDS)

ACTCTTCTCCCTCCTCCTTCTTCCCTCCGCCACCACATCATGCATAGCTTCTCCCCCGCCGTTGACACCTCCATCTTTCACCTCCACTCCCCCGACCTCATCGTGTCCCCCCCACTTTTTCCATCATTCCCTAACTTCTCATCTTCTCATTCCTCTTCCTTTCTCCTAGCATACAGCCAGCTCGCTCTGAACCCGGTGCTCGAGTCACCTGAGCTTTTACCCTCAGAGGTGATCAGTTATAGTGGTAGTAGTGGACCTTGTAGTAGCTACGGGTCTCCGACGTCATCGCAACCTTCCCTAATACAGCGGAGCATGAGTAGCCAGTCGCTCCAAAAGGATAGGGTAAGGCATGGACCGGGTGCTAGGATTTCCTCGTTAATCGACACGGATATGCCGGCCGTGAGAAGGGTTTACAGCTCCGGTGATTTGCAGGGAAGAACAGAAAGAGGGTGCTCAAGTGAAAGCAGTTTGATAATAGAAGGAATGACCAAAGCTTGTAGATATAGTCCTGAAGAGAAGAGAGAGAGAATTGAAAGATATAAAACCAAAAGAAATCAAAGGAATTTTAATAAGAAGATCAAGAAAAACATTGGCCGATAG

Protein sequence

TLLPPPSSLRHHIMHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKIKKNIGR
Homology
[Close]
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match: XP_011657991.1 (two-component response regulator-like APRR9 isoform X1 [Cucumis sativus] >KGN65685.1 hypothetical protein Csa_020089 [Cucumis sativus])

HSP 1 Score: 345 bits (885), Expect = 3.94e-118
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 73
           MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 60

Query: 74  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 133
           PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA
Sbjct: 61  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 120

Query: 134 VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI 193
           VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI
Sbjct: 121 VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI 180

[Close]
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match: XP_008457517.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo])

HSP 1 Score: 331 bits (848), Expect = 1.88e-112
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVS--PPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 73
           MHSFSPAVDTSIFHLHSPDLIVS  PPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60

Query: 74  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 133
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 134 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNK 193
           PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIERYK+KRNQRNFNK
Sbjct: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180

[Close]
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match: XP_038895146.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 255 bits (652), Expect = 1.33e-82
Identity = 150/189 (79.37%), Postives = 156/189 (82.54%), Query Frame = 0 

Query: 14  MHSFSPAV-----DTSIFHLHSPDLIVSPPLFPSFPNFSSSH--SSSFLLAYSQLA-LNP 73
           MH+FS        D S+ HLHSPD  VSPPLFPSFPNF SSH  SSS L  YSQL+ L+ 
Sbjct: 1   MHTFSTVTGTITADASLCHLHSPDHAVSPPLFPSFPNFFSSHTSSSSLLPTYSQLSELDL 60

Query: 74  VLESPELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISS 133
           VLES   LPSEV SYSGSSGPCSSYGSPTS QP+LI RSMSS SLQK+RV HGPGAR SS
Sbjct: 61  VLESSGFLPSEV-SYSGSSGPCSSYGSPTS-QPALIHRSMSSHSLQKNRVSHGPGARSSS 120

Query: 134 LIDTDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRN 193
           L D D PAVRRVYSSGDLQGRTERGCSSESSLIIE MTKACRYSPEEKRERIERYKTKRN
Sbjct: 121 LFDADGPAVRRVYSSGDLQGRTERGCSSESSLIIERMTKACRYSPEEKRERIERYKTKRN 180

[Close]
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match: XP_031738516.1 (uncharacterized protein LOC105435928 isoform X2 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 1.69e-82
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 73
           MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 60

Query: 74  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 133
           PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA
Sbjct: 61  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 120

Query: 134 VRRVYSSGDLQ 144
           VRRVYSSGDLQ
Sbjct: 121 VRRVYSSGDLQ 131

[Close]
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match: KAA0033878.1 (zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo var. makuwa] >TYK01262.1 zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 245 bits (625), Expect = 8.45e-80
Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVS--PPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 73
           MHSFSPAVDTSIFHLHSPDLIVS  PPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60

Query: 74  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 133
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 134 PAVRRVYSSGDLQGRTERGC 151
           PAVRRVYSSGDLQ   + GC
Sbjct: 121 PAVRRVYSSGDLQVNPKIGC 140

[Close]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match: A0A0A0LUR6 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV=1)

HSP 1 Score: 345 bits (885), Expect = 1.91e-118
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 73
           MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPELL 60

Query: 74  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 133
           PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA
Sbjct: 61  PSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDMPA 120

Query: 134 VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI 193
           VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI
Sbjct: 121 VRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNKKI 180

[Close]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match: A0A1S3C703 (zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191 PE=4 SV=1)

HSP 1 Score: 331 bits (848), Expect = 9.11e-113
Identity = 175/183 (95.63%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVS--PPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 73
           MHSFSPAVDTSIFHLHSPDLIVS  PPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60

Query: 74  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 133
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 134 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRNFNK 193
           PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEK+ERIERYK+KRNQRNFNK
Sbjct: 121 PAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKKERIERYKSKRNQRNFNK 180

[Close]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match: A0A5A7STD4 (Zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold49G00490 PE=4 SV=1)

HSP 1 Score: 245 bits (625), Expect = 4.09e-80
Identity = 129/140 (92.14%), Postives = 133/140 (95.00%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVS--PPLFPSFPNFSSSHSSSFLLAYSQLALNPVLESPE 73
           MHSFSPAVDTSIFHLHSPDLIVS  PPLFPSFPNFSSSHSSSFLLAYSQLAL+PVLESP+
Sbjct: 1   MHSFSPAVDTSIFHLHSPDLIVSSSPPLFPSFPNFSSSHSSSFLLAYSQLALDPVLESPD 60

Query: 74  LLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 133
           LLP EVISYSGSSGPCSSYGSPTSSQP+LIQRSMSSQSLQKDRVRHGPGARISSLIDTDM
Sbjct: 61  LLPLEVISYSGSSGPCSSYGSPTSSQPALIQRSMSSQSLQKDRVRHGPGARISSLIDTDM 120

Query: 134 PAVRRVYSSGDLQGRTERGC 151
           PAVRRVYSSGDLQ   + GC
Sbjct: 121 PAVRRVYSSGDLQVNPKIGC 140

[Close]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match: A0A6J1HLZ0 (zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464822 PE=4 SV=1)

HSP 1 Score: 182 bits (463), Expect = 2.93e-54
Identity = 120/185 (64.86%), Postives = 135/185 (72.97%), Query Frame = 0 

Query: 14  MHSFSPA-VDTSIFHLHSPDLIVSPPLFPSFPNFSSSHSSSF--LLAYSQLALNPVLESP 73
           MH+FS A ++ S+ HL +PDL +SPPL  SFP+F SSHSSSF  LLA     L P+LESP
Sbjct: 1   MHAFSSATLEASLCHLPAPDLAMSPPLLASFPHFISSHSSSFSSLLASD---LVPMLESP 60

Query: 74  ELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLIDTD 133
            LLPSE +SYS SSGPCSSYGSPTS      QRSM          RH P  +IS+L D +
Sbjct: 61  GLLPSE-LSYSCSSGPCSSYGSPTSKP----QRSM----------RHRPNVQISTLFDLE 120

Query: 134 MPAVRRVYSSGDLQGRTERGCSSESSLIIEGM-TKACRYSPEEKRERIERYKTKRNQRNF 193
             +VRR YS  DLQGRTE   SSESSLIIEGM TKACRYSPEEKR+RIE+YKTKRNQRNF
Sbjct: 121 S-SVRRAYSFNDLQGRTEMASSSESSLIIEGMSTKACRYSPEEKRQRIEKYKTKRNQRNF 166

[Close]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match: A0A6J1DVX1 (uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023585 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 3.83e-54
Identity = 123/186 (66.13%), Postives = 134/186 (72.04%), Query Frame = 0 

Query: 14  MHSFSPAVDTSIFHLHSPDLIVSP-PLFPSFPNFSSSH-SSSFLLAYSQLA---LNPVLE 73
           MH  S A   ++ HLHSPD+ +SP P FPS PNFS SH S S L AY QL    L+ V E
Sbjct: 1   MHGLSAA---ALCHLHSPDIAISPLPPFPSLPNFSLSHYSPSPLSAYCQLLRCQLDSVPE 60

Query: 74  SPELLPSEVISYSGSSGPCSSYGSPTSSQPSLIQRSMSSQSLQKDRVRHGPGARISSLID 133
           S  LL SEV SYSGSSGPCSS GSPTS QP LIQRS+SS         HG   ++S+L  
Sbjct: 61  SEGLLNSEV-SYSGSSGPCSSNGSPTS-QPGLIQRSLSS---------HGLDLQLSAL-- 120

Query: 134 TDMPAVRRVYSSGDLQGRTERGCSSESSLIIEGMTKACRYSPEEKRERIERYKTKRNQRN 193
                VRRV+S+GDLQGR ERG SSESSLIIEGM KACRYSPEEKRERIERYKTKRNQRN
Sbjct: 121 ---GPVRRVHSAGDLQGRAERGWSSESSLIIEGMAKACRYSPEEKRERIERYKTKRNQRN 167

The following BLAST results are available for this feature:
BLAST of Cucsat.G18544.T3 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G18544.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657991.13.94e-118100.00two-component response regulator-like APRR9 isoform X1 [Cucumis sativus] >KGN656... [more]
XP_008457517.11.88e-11295.63PREDICTED: zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo][more]
XP_038895146.11.33e-8279.37zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida][more]
XP_031738516.11.69e-82100.00uncharacterized protein LOC105435928 isoform X2 [Cucumis sativus][more]
KAA0033878.18.45e-8092.14zinc finger protein CONSTANS-LIKE 3-like [Cucumis melo var. makuwa] >TYK01262.1 ... [more]
BLAST of Cucsat.G18544.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LUR61.91e-118100.00CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G497300 PE=4 SV... [more]
A0A1S3C7039.11e-11395.63zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo OX=3656 GN=LOC103497191... [more]
A0A5A7STD44.09e-8092.14Zinc finger protein CONSTANS-LIKE 3-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1HLZ02.93e-5464.86zinc finger protein CONSTANS-LIKE 5-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1DVX13.83e-5466.13uncharacterized protein LOC111023585 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..113
NoneNo IPR availablePANTHERPTHR31319ZINC FINGER PROTEIN CONSTANS-LIKE 4coord: 80..195
NoneNo IPR availablePANTHERPTHR31319:SF76CCT MOTIF PROTEINcoord: 80..195

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G18544Cucsat.G18544gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18544.T3.E1Cucsat.G18544.T3.E1exon
Cucsat.G18544.T3.E2Cucsat.G18544.T3.E2exon
Cucsat.G18544.T3.E3Cucsat.G18544.T3.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18544.T3.C3Cucsat.G18544.T3.C3CDS
Cucsat.G18544.T3.C2Cucsat.G18544.T3.C2CDS
Cucsat.G18544.T3.C1Cucsat.G18544.T3.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G18544.T3Cucsat.G18544.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009909 regulation of flower development
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding