Cucsat.G18463.T4 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G18463.T4
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Locationctg3379: 2079495 .. 2081261 (+)
RNA-Seq ExpressionCucsat.G18463.T4
SyntenyCucsat.G18463.T4
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAATTGGAGCCTTCTTCGTGAAAAAGCCCCTTCTTCTCAAAATTTCTCTTGCCAACCTCCCTTCATGCCGCAATTTCTCTCTATCTCTCCACCGCCAACACCCACTACTCTTGCGGCACCCGGTCCAAGAGAAGAAAGACTGAGATTTCTCTATGCGATTCCATGATCTACTTGGGAGGAATCCGTCGATGTGGTCAAGCTCACACCTCAATGTGTGGAAGAAAAGAATACAAATTGAATCATCATTGGAGAGGAATGAAGTAGGGAGAATGGGTCTTAGTAAAATAAAAGTGAACAAGGTGAGACCCACTCCGATCCCAACAATAGGGCTAGGGCCCCGATCCTCTTCTTCACGAGCTCCTCCTCTTTCTACTACCCAAGTTCGCCGGAGCTATTACTGCTATGGTTTCAAGGTTTGCCTTCCAATTTCCCATTCTTTAGTTATTTTCAACAATTAAATTCAATTATTTTGTAGGATGGAATTGCTATTTTCCAGAATGGGAACTAATTAGACAAAATACTAGTTGCTGGAAAAAAGAATTGATTAGATCATTTTTCTATTTACTATTCACATGGGAAAAGCCTTCGTCTGTAGGAAAATACCCAAAATGAAGGCTTGTTGTTGATTAGATTAGATCATTTTTGTTGTTGTTGCCTTGTTTCTCCTTCTTTAGTATACAGTATATTATGTTTTGATACTTTTAAAATATATCTATCCATCGAATCTTATTTAGAAGAATTTTTACAGAAAATCAACTAACAAGGAAAGAGGTAACTCATACTTGTTATTAAAACAATCTTGATTTTTCAATGAGTTGGAATTGAAAATTTGATTTAGAAGAATTGTGGTTTCAGGTGGAGCACTTTTTGAGTTGCTCTGCCTTATCTTCAACTTGGACTGGCCCTGCCATATGACTTTTTGGTCTCCATCTACCTTCAATCATGAGATATTTTTTGAGAGAAGAAAAAGACAAAATAGAAAAAGATAGAATTTGAAATCAAGTTATTTCTATACTTGCAATGGTCTTTTCATCATTATTTTAAACTGTTACTCAAAATCATTATGAAACAAAGCAAACAAAGCAAGTTTGATTTTTGTGTTATTTAGAGTTGATAGTACAAGAAAGCAAGTTTACAAGGAAGGGGACAAAGAAGTTGTTCTCTCCATGGTCACTGTGATTAATTGTAAATATTATTTTTTTTTATCTATCCTTCTGTTTCTAAATATATGTATACCATATTATAATAACATTATGAAATATTTAACAATGTCTTCAAATTTTTAAGCAACAATTTTTGCATACGGGCAAACAAGCAGTGGAAAAACTTTCACAATGAATGGTGTCACTCAATATTCTGTGGCAGGCATTTATAGTTACATAGAGTCGGTGAGTTTCAGATTTATAGATAGATGTACGATATTTCAATAGAAATTTAATACGTCATTGTCTAATATGACTTAGTTTGTGGATGATAGCATCAAGACAGAGAATTTGTGCTGAAGCTTTCAGTAATTCCAAGTTCTACCAAGTACCAATTCCTAATCTATTTCTATCAATATTCTTTATTTCAGATCAGAGATGTCATAGTGCCATGGAACTCTTCTCATTTCACACCACAACAAAGAACTAAATAGTATATGTTTTGGTGTAATAAAATTATCCTTATTTCTAATGCCACCGTGTTGTTGGACTAAAAGAAACATAATAAATCATTTGTTTATGTAAGATATTTATTAAGATAAATCATTTGTTGGACTAAGGATT

Coding sequence (CDS)

ATGCGATTCCATGATCTACTTGGGAGGAATCCGTCGATGTGGTCAAGCTCACACCTCAATGTGTGGAAGAAAAGAATACAAATTGAATCATCATTGGAGAGGAATGAAGTAGGGAGAATGGGTCTTAGTAAAATAAAAGTGAACAAGGTGAGACCCACTCCGATCCCAACAATAGGGCTAGGGCCCCGATCCTCTTCTTCACGAGCTCCTCCTCTTTCTACTACCCAAGTTCGCCGGAGCTATTACTGCTATGGTTTCAAGCAACAATTTTTGCATACGGGCAAACAAGCAGTGGAAAAACTTTCACAATGA

Protein sequence

MRFHDLLGRNPSMWSSSHLNVWKKRIQIESSLERNEVGRMGLSKIKVNKVRPTPIPTIGLGPRSSSSRAPPLSTTQVRRSYYCYGFKQQFLHTGKQAVEKLSQ
Homology
The following BLAST results are available for this feature:
BLAST of Cucsat.G18463.T4 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G18463.T4 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G18463.T4 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..73
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..73

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G18463Cucsat.G18463gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18463.T4.E1Cucsat.G18463.T4.E1exon
Cucsat.G18463.T4.E2Cucsat.G18463.T4.E2exon
Cucsat.G18463.T4.E3Cucsat.G18463.T4.E3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G18463.T4.C1Cucsat.G18463.T4.C1CDS
Cucsat.G18463.T4.C2Cucsat.G18463.T4.C2CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G18463.T4Cucsat.G18463.T4-proteinpolypeptide