Cucsat.G18215.T8 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTTGTTGAAAATTTGAAAATAACCCATTTACGTGTGTTGAACAAGACTGTTGCTTTTTGGGGTCGTGAGAGAAAAGATGGAAAGAAAATAAGAGGGTCTGTAGATCTAATTAAACCATCAAAAGATACCAACATTCTACCATACTCTCTCAACCTCTTTTTTCTTCTTTTGCTTAATCTCTCATTAATTTTTGGGCGACCAGTTTTGGTGTGATTTCTTCAATCTTATAAATTCATCAAAACCAATGATTGATTGCAATTAGCTTCAACTCCGAGTATTATTAGTATTCAATCCTTCACGAACAATCGTTGGCGTACATTTGTGGTAGAAATAGGGATCTGGGTATACCATAACATCGTCTGATTTTGCCGACATTCTTGTTCTTTGTGGTTTATTGTTGTAAAATCGCATCTGGGTACGAGTGGTTCTTTGATTTTCTGTGATAGATTGCTATAAACATTGAGTTTTTTTTTTTTTTACAATCATTTCGATTTGCGTTTTGGGTTTTCAATCTCCCTGTTTGTAGTGATGGCGGGGAATGGGTTGTTTTACCCGATTCTTGGATTCGCATCCTGTTTGGCTTTCATTTACTTGTCGTTTGGAGATTTGAGGATTGGGGACACTAAAGTAATCCCCATAGTAGATTTTGTAGAGAGGAACGGAACGCAGTTCATGTTGAACGGGAAGGCGTTTTATATTAATGGATGGAATTCTTATTGGTTTATGGACCATTCCGTTGAGGAATATAGAAAGCCTAGAATCAGAGCCATGCTGCAGGCGGCGAGAAAGATGGGGCTTACTGTTTGCCGGACTTGGGCTTTCAATGATGGTGGTTACAATGCCCTTCAGGTTTCTCCCGGAAGGTTTAACGAGCGAGTCTTTAAGGTATTGATTGAGCTGCATTTTCTGAGATTTCTGCTGTTTCTGTGATTGGATTCTTCATTTATTTGATTCTACTCTTAATGCTTTGGTTTTGTGTTCGTAATTTGTTTCTTTTTCTGAAATTTTATGGCAATGTCTGTTTTAGAGAGAGATGAGTGATTCTGCAGGGTTTGAAAGGTTCCATTGGCCAAAGAATGCAAAGCTTGGATGCTTCCACCGACAGAAAAACTGTGTCGGTAGTCATAAAACAATATGGAATTATTTTGTGAATCGCATGATTTTCTTGGAAAAGAAACGGTAGTTCTTGCCATTATGGTTAAGATGAATGAATTAGACTGAAGACAATAAATTATCTGTCAGTTCCTTTTGGCATTTAAAGGTGGATTAATTGAGTATGATTTAAATTCTCATGTTCTGTAACCCCAATAAGAAGCATTATAACTTGTATTTCTGTGGAAGATCAATCTGGTTTTGTTTGTTATCTTGTCAATATAGTTTCAAGTTCAAAAAATGAAGACTGGAATTCATGGAAGAACCAGAAAACTTTCTATTTCCATCTATCTCGCTTTCTCTTTTTGAGAAATATAAGGATAAATGACACATTATCCAAAAAATACACAAGAAAGCATATGTTTGTATATATTTTTTCCATAGCAATTGTTTAGTTTGATGGCGTTTTTTATTTGCGCAAATGCATATGTGAAGTTGTGCTGTTATCAGCTTACGTTTCAATTGGTCCTTCCTGGTGGCAGGCTTTGGATCATGTCATTGCAGAATCAAGGCAGCATGGGATAAGACTTCTTCTTAGCTTAGTTAACAACTTGCAAGCATACGGTGGGAAGACTCAGTATGTGAAGTGGGCATGGCAAGATGGTGTTGGTTTAAGCTCTTCCAATGATTCCTTCTTTTATGATCCATCAATACGCATTTATTTTAAAAATTATCTCAAGGTACATTCCTTATTTATCAATGAGTTTGTCCAATATGTTTCATAACATTGATGATTTGGTATGCATCCTGAGCTATGCCATGGATTCAAATATATTGATCCAATTGCTATTTACCATTGCATAAGCCATTAGTTCTCGGGTTCAAACAAAAATTCTTACCCTTGTCTTTGCAGATCTTACATTGCTAAATTCTACCTTATGGTGTTTTAGTGGTTCTAATGTGCACTATATTTTTCACTTTGTCAGACCGTCCTGACAAGAAAGAATTCTATCACTGGAATTGAATATAGAAATGATCCCACCATCTTTGGATGGGAATTGATTAATGAGCCACGTTGCATGACCGATGCTTCAGGCGATACACTTCAAGTAAGTTTTAAGATTTTGGTTCTTCTGATTTCTGAATGCTGAACCAAATGAGAATTGAAATAAATGGATTCTGGTGTACTCCCCAATTAAGTTGTAAGATTTTGATTCTTCTTGCTTCTAAATGTTAAACCAAAGGAAAACTAACCCTCATTGAACTTACTGTACTCCCGTTTGAGTCTTTTGATAGCTCACTTTTGTAATTTGGGATTGTTACGCAACTTTCTTTCTTCCAAACTTTTTCTTGTGAAAGTTATGAGCTCTCTACTTGGTATTTCTCAACCTCAACTTTGCTTCAAGTTGATTTCTCTAAAGCAAAGTTGCGTTTATTTTTCACCATGTTTTAAGTGTATTTTACCAGAATTAACTCAACGTCTAAAACGAACCTACCAGTCCCAATGTGGAATATATCTTTATCAGTTAATGGCAGAAGCAATATTCACAAATGGACTCATTTTGACCTTGTGTTTGATCCTAATATATGTTTCTCAAGATTTTTGTAAGTATGACCCAATCCTATAGACACTAATGTAGAATGACCCAATCCTAAATAATCAATGAAAACTAACCTTCAGTTGACGTCACATAGCACACTATCGCATTAGAGACATCCCTCCATTCGCAAAATAGTCGGTGCCCTAATGCAATTCATTTCAATAGCAATGTTTCTTTTTAATCAACAGTTGTCCAATCAGCAATGATCTAAAGAAACATCATATTGAAATGAATATCGGTGACTATTTTGCAATGGGTAAGACGTCTTGTTGCAAAAAGAAGTTTCGAGCAGTAGAGTGCTTTGTGATGTTAGTTGAAGGTTCGTTTTCATTGGTTTTTAGGATAGAGTCATTTCACATCAATGCTGCCACCAGGATTGGGTCATCAAATCTCTTGTTTCTCTTCCCACCCCCCACCCCCAAGGGAAGAAAAGAAAAAAGCATCGTTTCTATATCTATGCATAAGCTTATTTTGAGGAATAAAATTTGTAGGAATGGATTGAAGAAATGACAGCTTACATTAAATCGATTGACAAGAAACATCTGCTGACTGTTGGGTTGGAAGGATTTTATGGTCCAAATAGCCCGAAGAAATCTACTGTGAACCCGGAAGAGTGGGCATCAAGACTTGGATCGGATTTCATCCGCAATTCTGAGATCCAACACGTGGATTTTGCCTCTGTTCATATCTACCCCGACCATTGGTAAGCATTGATGAATCTCAGTTTAAAACTTGGATGGCAATCGTCAATGATTCTACTCATGTCCATGCTCTTAAACCTGTTATTTACATAACCACATTAACATTCTGTGTCGATTAGGTTCCACGATCAAGATTTCGAAGATGAACTGAAATTTGTCTCCAAGTGGATGCTCTCCCATATTGAAGATGGTGACAAAGAGTTGAAGAAGCCAGTCATGTTTACTGAATTTGGACTGTCAGATCTGAACAAGGGCTTCACCCCAGCTCAACGGGATAGTTTTTACAAAACCGTTTACGACGTCATTTACAAATCTGCCAAGAGGAATAGATCAGGAGCTGGCTCCTTAGCATGGCAGTTCCTTGTGGAAGGAATGGAAGAGAGTAATGATGATTTCGGGATCGTCCCGTGGGAAAGATCGTCGATATATCAGCTTATTATAGAGCAATCATGCAGGTTGGCAAGAATTGGTGGAGATACCCAACAGCTAAAAGCATTGAAGTATGTGTGTGCTCAGAGATGGTGATCTGACTATATCTTATTTGAGAGAATTCAATTTGTTCACTTGCTGCTATATTTTGCCTCTGTGCCCTTCGTTTCTTCTGTTGATACATATTCAGAATAGATTAGGTAGTTTTAACATATAGTATTGAGTTTCACATGAACTGCTACAAGCTGTAATGTTTTTTGAGCAAATATATAAGTCATAAATCTATTTTATTTTACTTTT ATGACCGATGCTTCAGGCGATACACTTCAAGAATGGATTGAAGAAATGACAGCTTACATTAAATCGATTGACAAGAAACATCTGCTGACTGTTGGGTTGGAAGGATTTTATGGTCCAAATAGCCCGAAGAAATCTACTGTGAACCCGGAAGAGTGGGCATCAAGACTTGGATCGGATTTCATCCGCAATTCTGAGATCCAACACGTGGATTTTGCCTCTGTTCATATCTACCCCGACCATTGGTTCCACGATCAAGATTTCGAAGATGAACTGAAATTTGTCTCCAAGTGGATGCTCTCCCATATTGAAGATGGTGACAAAGAGTTGAAGAAGCCAGTCATGTTTACTGAATTTGGACTGTCAGATCTGAACAAGGGCTTCACCCCAGCTCAACGGGATAGTTTTTACAAAACCGTTTACGACGTCATTTACAAATCTGCCAAGAGGAATAGATCAGGAGCTGGCTCCTTAGCATGGCAGTTCCTTGTGGAAGGAATGGAAGAGAGTAATGATGATTTCGGGATCGTCCCGTGGGAAAGATCGTCGATATATCAGCTTATTATAGAGCAATCATGCAGGTTGGCAAGAATTGGTGGAGATACCCAACAGCTAAAAGCATTGAAGTATGTGTGTGCTCAGAGATGGTGA MTDASGDTLQEWIEEMTAYIKSIDKKHLLTVGLEGFYGPNSPKKSTVNPEEWASRLGSDFIRNSEIQHVDFASVHIYPDHWFHDQDFEDELKFVSKWMLSHIEDGDKELKKPVMFTEFGLSDLNKGFTPAQRDSFYKTVYDVIYKSAKRNRSGAGSLAWQFLVEGMEESNDDFGIVPWERSSIYQLIIEQSCRLARIGGDTQQLKALKYVCAQRW Homology
BLAST of Cucsat.G18215.T8 vs. ExPASy Swiss-Prot
Match: Q7Y223 (Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis thaliana OX=3702 GN=MAN2 PE=2 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.2e-93 Identity = 159/214 (74.30%), Postives = 184/214 (85.98%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy Swiss-Prot
Match: Q9M0H6 (Mannan endo-1,4-beta-mannosidase 5 OS=Arabidopsis thaliana OX=3702 GN=MAN5 PE=2 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 1.9e-86 Identity = 146/213 (68.54%), Postives = 179/213 (84.04%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy Swiss-Prot
Match: Q0JJD4 (Mannan endo-1,4-beta-mannosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MAN2 PE=2 SV=2) HSP 1 Score: 253.8 bits (647), Expect = 1.7e-66 Identity = 121/214 (56.54%), Postives = 158/214 (73.83%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy Swiss-Prot
Match: Q0DCM5 (Mannan endo-1,4-beta-mannosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MAN6 PE=2 SV=2) HSP 1 Score: 209.5 bits (532), Expect = 3.7e-53 Identity = 99/203 (48.77%), Postives = 137/203 (67.49%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy Swiss-Prot
Match: Q9FJZ3 (Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana OX=3702 GN=MAN7 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.1e-48 Identity = 90/196 (45.92%), Postives = 125/196 (63.78%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. NCBI nr
Match: XP_004139946.1 (mannan endo-1,4-beta-mannosidase 2 [Cucumis sativus] >KGN46738.1 hypothetical protein Csa_021081 [Cucumis sativus]) HSP 1 Score: 449 bits (1155), Expect = 3.77e-156 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. NCBI nr
Match: XP_008448293.1 (PREDICTED: mannan endo-1,4-beta-mannosidase 2 [Cucumis melo] >TYK04966.1 mannan endo-1,4-beta-mannosidase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 441 bits (1134), Expect = 5.87e-153 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. NCBI nr
Match: KAA0062055.1 (mannan endo-1,4-beta-mannosidase 2 [Cucumis melo var. makuwa]) HSP 1 Score: 440 bits (1131), Expect = 1.68e-152 Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. NCBI nr
Match: XP_038902035.1 (mannan endo-1,4-beta-mannosidase 2-like [Benincasa hispida]) HSP 1 Score: 429 bits (1103), Expect = 3.02e-148 Identity = 206/215 (95.81%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. NCBI nr
Match: XP_023512795.1 (mannan endo-1,4-beta-mannosidase 2-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424 bits (1089), Expect = 6.86e-147 Identity = 203/211 (96.21%), Postives = 206/211 (97.63%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy TrEMBL
Match: A0A0A0KB35 (Mannan endo-1,4-beta-mannosidase OS=Cucumis sativus OX=3659 GN=Csa_6G127990 PE=3 SV=1) HSP 1 Score: 449 bits (1155), Expect = 1.82e-156 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy TrEMBL
Match: A0A5D3C3G0 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001850 PE=3 SV=1) HSP 1 Score: 441 bits (1134), Expect = 2.84e-153 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy TrEMBL
Match: A0A1S3BJC2 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo OX=3656 GN=LOC103490531 PE=3 SV=1) HSP 1 Score: 441 bits (1134), Expect = 2.84e-153 Identity = 212/215 (98.60%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy TrEMBL
Match: A0A5A7V836 (Mannan endo-1,4-beta-mannosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G003960 PE=3 SV=1) HSP 1 Score: 440 bits (1131), Expect = 8.12e-153 Identity = 211/215 (98.14%), Postives = 212/215 (98.60%), Query Frame = 0
BLAST of Cucsat.G18215.T8 vs. ExPASy TrEMBL
Match: A0A6J1FWH9 (Mannan endo-1,4-beta-mannosidase OS=Cucurbita moschata OX=3662 GN=LOC111448802 PE=3 SV=1) HSP 1 Score: 422 bits (1085), Expect = 1.35e-146 Identity = 202/211 (95.73%), Postives = 206/211 (97.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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