Cucsat.G17550.T3 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATATATATGAAAACTAACGAGATTGGATTTGATAACAGTGTTGAATACAATGTGTCATATGTATATCATTCCATGTATGCCTACTTTGACAGAGACAATGTAGCACTCAAGGGTTTGGCCAAGTGAGTTTTGATTTTTGGATATCTTGTCTTATTTTCAAAAACCAAATCGAACCGTTACTAAGTGGTTTTTTTCCTTATAATTTGTGGAACTTCAAAGGTTTTTCAAGGAATCAAGTGAAGAAGAAAGGGATCACGCTGAGAAATTGATGGAATATCAGGTAGATAAGTTGCGAGGAAGGTTGATTTTGTGTTTTTAGAATTTCTTTTATTGATTTTGGATCATTTTGCAGAACAAACGAGGTGGGCGAGTGACATTAGAGTCTTTGATTAAGCCCTTGTGTGAATATGACAATGAGGAAAAAGGAGATGCCTTATATGGTTAGTTTTCCTTGTTTTTTTTTTTTTTAATCTTTTCATTGCTATATTTATATGAATGGTAGATATATTTGAATATGAGATTTGCAATTATTTATCATTTCTGTTTCACTGATGTTGACTTCCTAACATCAATGATAAGGACTTGAATTTGTGAAATTATCTGCATGTTGATTGATGTCTTATTCCTAGTTTATACTTGCATGCTATAATTCTATAATTATGTTGTTGATTGTGACATTGAGATGTCTTATGTGTTTTAAATTTTAAGCAATGGAGCTCGCTTTATCCCTTGAGAAGCTAACAAATGAAAAGTTACTCCACTTGCACAAGGTAGAGTTTTATTTATGGCTTTCACATTTTTGTTTAGGGTGTTGCTTGAGTTCTGAAGTTGTAGAAATATACTTATTATGTGCATTCTCTCTTAGGTGGCTGAAGATAATCAAGACGTGCAGATGACCGAGTTTATTGAAAGCGAATTCTTGGGAGAACAGGTAACAACGCCTCTGCGAGTGATTGATTTTAATTATACTTTGTTGTCACATAAGCATAAATATTCTCAATGTTTAAAACTTAACCATTCTAGATAGAAGCAATCAAGAAAATCTCAGAGTATGTTGCACAGCTAAGAAGACTAGGCAAGGGACACGGTAAGGATAACAACAATGCCCTCGCCCCCCATTGCCTCTTGGCTTTCGGTTTTCTCGTTCCTAATGTGTCTCCGGTGGTTAACGATATTCTTTTTGAAACCTTGTTTTCAGGAGTGTGGCACTTTGATCAGATGTTGCTTCACGAGGAAGCATAAACAAAGGGATTTGGCTGCATAGAGTAAAAGTTTAGTGAAATATGAAAATAAAATGGTGTCCAGGTTGGATGTGGTTGTTTGGATTTCTAGTTTTAGAGGGCAGATGATGATTTGTGTTAGAATTTTCTGTTGTTAACGTGTTAGTTAATGTTGTGTTTTGGTTTTCAAAGGTTTATTTTGATGTTAATGGAAGATTCTCACTTGTTTTTAATTCTAAACTAGACTTTATTTACCCTATTTGACTCTTAATATTCTAATCCTTATCCCATTTTTTAAGATAGGATGAAGGCGTCACAATTTAGGATTAATTATGATGATTGTTATAGCATTTCCAA ATATATATGAAAACTAACGAGATTGGATTTGATAACAGTGTTGAATACAATGTGTCATATGTATATCATTCCATGTATGCCTACTTTGACAGAGACAATGTAGCACTCAAGGGTTTGGCCAAGTTTTTCAAGGAATCAAGTGAAGAAGAAAGGGATCACGCTGAGAAATTGATGGAATATCAGAACAAACGAGGTGGGCGAGTGACATTAGAGTCTTTGATTAAGCCCTTGTGTGAATATGACAATGAGGAAAAAGGAGATGCCTTATATGCAATGGAGCTCGCTTTATCCCTTGAGAAGCTAACAAATGAAAAGTTACTCCACTTGCACAAGGTGGCTGAAGATAATCAAGACGTGCAGATGACCGAGTTTATTGAAAGCGAATTCTTGGGAGAACAGATAGAAGCAATCAAGAAAATCTCAGAGTATGTTGCACAGCTAAGAAGACTAGGCAAGGGACACGGAGTGTGGCACTTTGATCAGATGTTGCTTCACGAGGAAGCATAA IYMKTNEIGFDNSVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSEEERDHAEKLMEYQNKRGGRVTLESLIKPLCEYDNEEKGDALYAMELALSLEKLTNEKLLHLHKVAEDNQDVQMTEFIESEFLGEQIEAIKKISEYVAQLRRLGKGHGVWHFDQMLLHEEA Homology
BLAST of Cucsat.G17550.T3 vs. ExPASy Swiss-Prot
Match: Q948P6 (Ferritin-3, chloroplastic OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.4e-71 Identity = 132/155 (85.16%), Postives = 147/155 (94.84%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy Swiss-Prot
Match: Q41709 (Ferritin-2, chloroplastic OS=Vigna unguiculata OX=3917 GN=PFE2 PE=2 SV=2) HSP 1 Score: 258.5 bits (659), Expect = 5.4e-68 Identity = 123/154 (79.87%), Postives = 145/154 (94.16%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy Swiss-Prot
Match: Q948P5 (Ferritin-4, chloroplastic OS=Glycine max OX=3847 PE=1 SV=2) HSP 1 Score: 255.8 bits (652), Expect = 3.5e-67 Identity = 122/154 (79.22%), Postives = 145/154 (94.16%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy Swiss-Prot
Match: Q39101 (Ferritin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FER1 PE=1 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 1.9e-65 Identity = 120/153 (78.43%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy Swiss-Prot
Match: Q96540 (Ferritin-1, chloroplastic OS=Brassica napus OX=3708 GN=LSC30 PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 1.9e-65 Identity = 119/153 (77.78%), Postives = 141/153 (92.16%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. NCBI nr
Match: XP_011655010.1 (ferritin-3, chloroplastic [Cucumis sativus] >KGN50693.1 hypothetical protein Csa_005793 [Cucumis sativus]) HSP 1 Score: 305 bits (780), Expect = 1.70e-102 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. NCBI nr
Match: XP_038891338.1 (ferritin-3, chloroplastic [Benincasa hispida]) HSP 1 Score: 294 bits (752), Expect = 2.90e-98 Identity = 147/156 (94.23%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. NCBI nr
Match: XP_008454826.1 (PREDICTED: ferritin-2, chloroplastic [Cucumis melo]) HSP 1 Score: 293 bits (751), Expect = 3.85e-98 Identity = 148/156 (94.87%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. NCBI nr
Match: KAA0035894.1 (ferritin-2 [Cucumis melo var. makuwa] >TYK19049.1 ferritin-2 [Cucumis melo var. makuwa]) HSP 1 Score: 293 bits (750), Expect = 5.85e-98 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. NCBI nr
Match: XP_022977138.1 (ferritin-3, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 290 bits (742), Expect = 9.97e-97 Identity = 144/156 (92.31%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy TrEMBL
Match: A0A0A0KM69 (Ferritin OS=Cucumis sativus OX=3659 GN=Csa_5G215130 PE=3 SV=1) HSP 1 Score: 305 bits (780), Expect = 8.25e-103 Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy TrEMBL
Match: A0A1S3C0P9 (Ferritin OS=Cucumis melo OX=3656 GN=LOC103495136 PE=3 SV=1) HSP 1 Score: 293 bits (751), Expect = 1.86e-98 Identity = 148/156 (94.87%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy TrEMBL
Match: A0A5A7SX33 (Ferritin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold529G00040 PE=3 SV=1) HSP 1 Score: 293 bits (750), Expect = 2.83e-98 Identity = 148/155 (95.48%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy TrEMBL
Match: A0A6J1IP51 (Ferritin OS=Cucurbita maxima OX=3661 GN=LOC111477295 PE=3 SV=1) HSP 1 Score: 290 bits (742), Expect = 4.83e-97 Identity = 144/156 (92.31%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of Cucsat.G17550.T3 vs. ExPASy TrEMBL
Match: A0A6J1GY11 (Ferritin OS=Cucurbita moschata OX=3662 GN=LOC111458521 PE=3 SV=1) HSP 1 Score: 290 bits (742), Expect = 4.83e-97 Identity = 144/156 (92.31%), Postives = 154/156 (98.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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