Cucsat.G17417.T8 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G17417.T8
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionChorismate synthase
Locationctg27: 1915228 .. 1917723 (-)
RNA-Seq ExpressionCucsat.G17417.T8
SyntenyCucsat.G17417.T8
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCATCCAAAACTGCGTATCCCATATTATGATTGAGCTTTCTATTTCTCAATCCTAGCCGCCACTTTTCTCCTGATTGATTTGTTATTGTCAATTCTTTAGGTACTTGCTTATGTATCTCAAGTCTACAAGGTTGTACTGCCCGAGGGTGTGGTTGATCATGAAACTTTGTCAATGGAGCAGGTAAACTAGCTAGCAATTCAGGGAGTTAAAACGGATACTCTAAAATATGTAAAGATACCAAATTTTGATATCCGAATTGTTGTTTGCCTTCAAGAATACCAATGCTGAAAATATATTGGGAATTACATTGAAGTTACTATCTGAAAGCTTAACAAGTGGGGTGTGATTCACTTTAATGCCTCTCTTTAGGTGCCGTCTTCGTTTTCTTTTTGCAATTATTGTACATTTATTACTTTTGTTGAACAATTGGATTCTCTTGCTGTAGAACTGGTTTCCCATTAATTATGTCTCCACTGACATATAATGATTTGTGTATATGCACGTTGAAATACTATCAATTATGGATGGTTATTCTAAATATTTCTAATAACCTTTCAAATTTTTCATAGTAAATGTTCTCCTTGTATACTCGGTTTCTTTTCTTTTATTAATATCGACCTGATGATCATTGCTTTGAATCTATCAGATTGAGAGCAACATAGTCAGGTGCCCAGATCCTGAATATGCTGAGAAAATGATTGCTGCCATTGACGCTGTTCGTGTGAGGGGGGAATCAATTGGTGGTGTTGTCACATGCATTGTGAAGAACTGTCCACCTGTATGTGTCTCTCTCCCTCCCTAAACACACTGTTGGCATGCGAATATTTCTGCGTCTAAAAGTCTTATTTTCATATCTCAAGATATTTCTATATTTTTAAAATTTTTGTTGAAGTAACGAGGATTACAAATTTCATCAGGGGCTTGGTTCACCAGTTTTTGACAAACTTGAAGCTGAGTTTGCTAAAGCTGTTTTGTCATTACCAGCATCGAAGGGCTTTGAAATTGGCAGTGGATTCGGAGGTTGAAATTTTGTCTAGCTCTTTGGAGCACACTATTTTTACATTAATTACACAACCCTTTTTGAAATTAATTCATGTTTTGTGGTTGCTCGTTGCCTTAGTTTTGTTTTTCTTTTTTATTCAGCACTCACATGTTCAAGACTAAACCCCCTGCAGGTACATTTTTAACTGGCAGTGAACACAACGATCCATTCTATTTAGATGAGAATGGAAGAATTAGAACGGTTACAAACCGCTCTGGTGGAATACAGGTAATGAGCCGTGCCAAAATGAAGTGATTAAAATTCGATCAACAGAACATGGTGCCTTTTCTTTATGTGATTTTGTTCTAATTACTGAGAACCTGTATTGTCGTTTAGGGAGGTATATCTAATGGAGAAGTCATAAGCATGAGGGTAGCTTTCAAGCCAACAGCTACCATTGGGGTAAGATGCTTCTCTATCATGATCTTTTCCATGCACATCTGATGAGAAATGTAATCTCCACCAATATACGTACATGGCACTTGAACCAATTTTCTTTTCTTTAACCCAGCCCGCAGTTATTGGTTCGCTTTTGGTGAACATAACAAGTGAATCCCACATTGCTTCAGTTTACCTTTTTCTGTATATGTTTTTTGGTGCTTTAATCCTGATATAAAAATACTTTGTGCTCTATGCAGAAAAAGCAGAATACAGTTACCAGAGATAAGAAAGAGGTTGAGCTGATTGCTCGTGGCCGTCACGACCCTTGTGTCGTCCCAAGAGGTATTCATTGATTTTTTATATATTCATCTATCTGTCCTTTGGAAGTGTGGCCATTATTAGCAAGAAAGCAAAGATATAAACTTAAGATATTGGCAGATTGCAGTCTCCACACTCCACTCCGTAGTATATTTTATTTCACATTTGACTGCCGATTTCTAATTTAGTAATCCCTAGAAAATGTGTTAAGAGATGTAAGATTTTACCTTTCTTAAAATAGCATTAGAAATCTTGTGACCATGAACATATACATACACTTACAGAAATGGAGAATTCTGTATATATTACAACAATTGCCTTTGTTTGTTTTGATGGTTATGCAGCTGTGCCTATGGTTGAAGCCATGGTAGCTCTAGTTCTTATGGACCAGTTGATGGCACAACATGGACAATGCAATCTGTTCCCAATCAATCCAGACTTGCAGTCACCTATCGAACCAAAAGTTGGGGTTTCGAAAACGACTGTTTGAACAAAAGCTATTGTAACATAGATCTCTTATACGCTTTGCACTCAGTGTTGTGCTCAATTCTTTTGTTTCCCTAATCTTCCTGTAATCTGTTAGGATCTTGGGACAAAATAAGTTAATATTGCTGAGTTGTTTGTGATGCTTCACCCTTGAAATTTATGAGACGTCAAAATTTTGGGAATGAAGTATTTGAATTGTGACCTTATTTCATAACCCTGCTAATGCTCTCTATCATAATTTTCGTAACAAAGTATTCAAATCATTAA

Coding sequence (CDS)

ATGGAGCAGATTGAGAGCAACATAGTCAGGTGCCCAGATCCTGAATATGCTGAGAAAATGATTGCTGCCATTGACGCTGTTCGTGTGAGGGGGGAATCAATTGGTGGTGTTGTCACATGCATTGTGAAGAACTGTCCACCTGGGCTTGGTTCACCAGTTTTTGACAAACTTGAAGCTGAGTTTGCTAAAGCTGTTTTGTCATTACCAGCATCGAAGGGCTTTGAAATTGGCAGTGGATTCGGAGGTACATTTTTAACTGGCAGTGAACACAACGATCCATTCTATTTAGATGAGAATGGAAGAATTAGAACGGTTACAAACCGCTCTGGTGGAATACAGGGAGGTATATCTAATGGAGAAGTCATAAGCATGAGGGTAGCTTTCAAGCCAACAGCTACCATTGGGAAAAAGCAGAATACAGTTACCAGAGATAAGAAAGAGGTTGAGCTGATTGCTCGTGGCCGTCACGACCCTTGTGTCGTCCCAAGAGCTGTGCCTATGGTTGAAGCCATGGTAGCTCTAGTTCTTATGGACCAGTTGATGGCACAACATGGACAATGCAATCTGTTCCCAATCAATCCAGACTTGCAGTCACCTATCGAACCAAAAGTTGGGGTTTCGAAAACGACTGTTTGA

Protein sequence

MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAEFAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGEVISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQLMAQHGQCNLFPINPDLQSPIEPKVGVSKTTV
Homology
[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match: Q42884 (Chorismate synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CS1 PE=2 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.6e-93
Identity = 166/211 (78.67%), Postives = 189/211 (89.57%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           +EQIESNIVRCPDPEYAEKMIAAIDAVRVRG+S+GGVVTCIV+N P GLG+PVFDKLEAE
Sbjct: 230 LEQIESNIVRCPDPEYAEKMIAAIDAVRVRGDSVGGVVTCIVRNLPRGLGTPVFDKLEAE 289

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKA +SLPA+KGFE GSGF GTF+TGSEHND FY+DE+GRIRT TNRSGGIQGGISNGE
Sbjct: 290 LAKACMSLPATKGFEFGSGFAGTFMTGSEHNDEFYMDEHGRIRTRTNRSGGIQGGISNGE 349

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           VI+MR+ FKPT+TI +KQ TVTRDK E ELIARGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 350 VINMRIGFKPTSTISRKQQTVTRDKHETELIARGRHDPCVVPRAVPMVEAMVALVLVDQL 409

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 212
           MAQ+ QC +FPINP+LQ P++     ++ T+
Sbjct: 410 MAQYSQCMMFPINPELQEPLQSSPESAEVTL 440

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match: P57720 (Chorismate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1144 PE=2 SV=2)

HSP 1 Score: 342.0 bits (876), Expect = 4.7e-93
Identity = 165/201 (82.09%), Postives = 185/201 (92.04%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           +EQIE+NIVRCP+PEYAEKMIAAIDAVR +G S+GGVVTCIV+N P GLG+PVFDKLEAE
Sbjct: 226 LEQIENNIVRCPNPEYAEKMIAAIDAVRTKGNSVGGVVTCIVRNAPRGLGTPVFDKLEAE 285

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKA +SLPA+KGFE GSGF GTFLTG EHND FY DENGRIRT TNRSGGIQGGISNGE
Sbjct: 286 LAKACMSLPATKGFEFGSGFAGTFLTGLEHNDEFYTDENGRIRTRTNRSGGIQGGISNGE 345

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPT+TIG+KQNTVTRDK E E+IARGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 346 IINMRVAFKPTSTIGRKQNTVTRDKVETEMIARGRHDPCVVPRAVPMVEAMVALVLVDQL 405

Query: 181 MAQHGQCNLFPINPDLQSPIE 202
           MAQ+ QC+LFPINP+LQ P++
Sbjct: 406 MAQYAQCHLFPINPELQEPLQ 426

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match: P27793 (Chorismate synthase, chloroplastic OS=Capnoides sempervirens OX=3464 PE=1 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.4e-92
Identity = 167/204 (81.86%), Postives = 185/204 (90.69%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           +EQIESNIVRCPD EYAEKMIAAIDAVRV+G+S+GGVVTCI++N P GLGSPVFDKLEAE
Sbjct: 234 LEQIESNIVRCPDSEYAEKMIAAIDAVRVKGDSVGGVVTCIMRNVPRGLGSPVFDKLEAE 293

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKA +SLPA+KGFE GSGF GTFLTGSEHND FY DENGRIRT TNRSGGIQGGISNGE
Sbjct: 294 LAKACMSLPATKGFEFGSGFSGTFLTGSEHNDEFYTDENGRIRTRTNRSGGIQGGISNGE 353

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MR+AFKPT+TIGKKQNTVTR+++E+ELIARGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 354 IINMRIAFKPTSTIGKKQNTVTREREEIELIARGRHDPCVVPRAVPMVEAMVALVLLDQL 413

Query: 181 MAQHGQCNLFPINPDLQSPIEPKV 205
           M QH Q NLF INP LQ P+   V
Sbjct: 414 MLQHAQGNLFSINPALQEPLSETV 437

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match: Q42885 (Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CS2 PE=2 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.2e-88
Identity = 158/202 (78.22%), Postives = 182/202 (90.10%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           +EQIESNIVRCP+PEYAEKMI AID VRVRG+S+GGVVTCIV+N P GLG+PVFDKLEAE
Sbjct: 224 LEQIESNIVRCPNPEYAEKMIGAIDYVRVRGDSVGGVVTCIVRNVPRGLGTPVFDKLEAE 283

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKA +SLPA+KGFE GSGF GTF+TGSEHND F++DE+ +IRT TNRSGGIQGGISNGE
Sbjct: 284 LAKACMSLPATKGFEFGSGFAGTFMTGSEHNDEFFMDEHDQIRTKTNRSGGIQGGISNGE 343

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPT+TI +KQ+TV+RDK E ELIARGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 344 IINMRVAFKPTSTIARKQHTVSRDKHETELIARGRHDPCVVPRAVPMVEAMVALVLVDQL 403

Query: 181 MAQHGQCNLFPINPDLQSPIEP 203
           M Q+ QC LFP+N  LQ P++P
Sbjct: 404 MTQYAQCMLFPVNLTLQEPLQP 425

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match: B7JVZ9 (Chorismate synthase OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=aroC PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.0e-75
Identity = 141/190 (74.21%), Postives = 154/190 (81.05%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           +E +ESNIVRCPDPE AEKMI  ID  R   +SIGGVV C+ +N P GLG PVFDKLEA+
Sbjct: 173 LENVESNIVRCPDPEMAEKMIDLIDQTRRNKDSIGGVVECVARNIPKGLGQPVFDKLEAD 232

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AK V+SLPASKGFEIGSGF GT LTGSEHND FYLDE G IRT TNRSGGIQGGISNGE
Sbjct: 233 LAKGVMSLPASKGFEIGSGFAGTLLTGSEHNDEFYLDETGEIRTTTNRSGGIQGGISNGE 292

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
            I +RVAFKPTATIGK+Q TVT   +E  L A+GRHDPCV+PRAVPMVEAMVALVL D L
Sbjct: 293 NIIIRVAFKPTATIGKEQKTVTNTGEETTLAAKGRHDPCVLPRAVPMVEAMVALVLCDHL 352

Query: 181 MAQHGQCNLF 191
           + Q GQC LF
Sbjct: 353 LRQEGQCGLF 362

[Close]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match: XP_004149912.1 (chorismate synthase, chloroplastic [Cucumis sativus] >KGN47815.1 hypothetical protein Csa_003097 [Cucumis sativus])

HSP 1 Score: 419 bits (1078), Expect = 2.11e-144
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match: XP_008456472.1 (PREDICTED: chorismate synthase, chloroplastic [Cucumis melo] >KAA0036456.1 chorismate synthase [Cucumis melo var. makuwa] >TYK00030.1 chorismate synthase [Cucumis melo var. makuwa])

HSP 1 Score: 416 bits (1069), Expect = 4.91e-143
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +ISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 IISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPIN DLQSPIEPKVGVSKTTV
Sbjct: 409 MAQHGQCNLFPINSDLQSPIEPKVGVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match: XP_038885398.1 (chorismate synthase, chloroplastic [Benincasa hispida])

HSP 1 Score: 403 bits (1036), Expect = 5.04e-138
Identity = 202/211 (95.73%), Postives = 206/211 (97.63%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRV+GESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVKGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRT+TNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTITNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
            I MR+AFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 TICMRIAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQ+GQCNLFPIN DLQSPIEPK  VSKTTV
Sbjct: 409 MAQYGQCNLFPINSDLQSPIEPKPEVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match: XP_022938712.1 (chorismate synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 391 bits (1005), Expect = 2.56e-133
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPE AEKMIAAID VR++GESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEIAEKMIAAIDDVRLKGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 LAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPTATIGKKQ+TVTRDKKEVELI RGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 349 IITMRVAFKPTATIGKKQSTVTRDKKEVELITRGRHDPCVVPRAVPMVEAMVALVLVDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPK   S T V
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKREASNTPV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match: XP_022992638.1 (chorismate synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 391 bits (1005), Expect = 2.56e-133
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPE AEKMIAAID VR++GESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEIAEKMIAAIDDVRLKGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 LAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPTATIGKKQ+TVTRDKKEVELI RGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 349 IITMRVAFKPTATIGKKQSTVTRDKKEVELITRGRHDPCVVPRAVPMVEAMVALVLVDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPK   S T V
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKREASNTPV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match: A0A0A0KDM6 (Chorismate synthase OS=Cucumis sativus OX=3659 GN=Csa_6G405290 PE=3 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 1.02e-144
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match: A0A5D3BM11 (Chorismate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00750 PE=3 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 2.38e-143
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +ISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 IISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPIN DLQSPIEPKVGVSKTTV
Sbjct: 409 MAQHGQCNLFPINSDLQSPIEPKVGVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match: A0A1S3C3F0 (Chorismate synthase OS=Cucumis melo OX=3656 GN=LOC103496416 PE=3 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 2.38e-143
Identity = 209/211 (99.05%), Postives = 210/211 (99.53%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
           FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +ISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL
Sbjct: 349 IISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPIN DLQSPIEPKVGVSKTTV
Sbjct: 409 MAQHGQCNLFPINSDLQSPIEPKVGVSKTTV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match: A0A6J1JZT4 (Chorismate synthase OS=Cucurbita maxima OX=3661 GN=LOC111488924 PE=3 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 1.24e-133
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPE AEKMIAAID VR++GESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEIAEKMIAAIDDVRLKGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 LAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPTATIGKKQ+TVTRDKKEVELI RGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 349 IITMRVAFKPTATIGKKQSTVTRDKKEVELITRGRHDPCVVPRAVPMVEAMVALVLVDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPK   S T V
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKREASNTPV 439

[Close]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match: A0A6J1FEV4 (Chorismate synthase OS=Cucurbita moschata OX=3662 GN=LOC111444857 PE=3 SV=1)

HSP 1 Score: 391 bits (1005), Expect = 1.24e-133
Identity = 196/211 (92.89%), Postives = 202/211 (95.73%), Query Frame = 0 

Query: 1   MEQIESNIVRCPDPEYAEKMIAAIDAVRVRGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 60
           MEQIESNIVRCPDPE AEKMIAAID VR++GESIGGVVTCIVKNCPPGLGSPVFDKLEAE
Sbjct: 229 MEQIESNIVRCPDPEIAEKMIAAIDDVRLKGESIGGVVTCIVKNCPPGLGSPVFDKLEAE 288

Query: 61  FAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 120
            AKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE
Sbjct: 289 LAKAVLSLPASKGFEIGSGFGGTFLTGSEHNDPFYLDENGRIRTVTNRSGGIQGGISNGE 348

Query: 121 VISMRVAFKPTATIGKKQNTVTRDKKEVELIARGRHDPCVVPRAVPMVEAMVALVLMDQL 180
           +I+MRVAFKPTATIGKKQ+TVTRDKKEVELI RGRHDPCVVPRAVPMVEAMVALVL+DQL
Sbjct: 349 IITMRVAFKPTATIGKKQSTVTRDKKEVELITRGRHDPCVVPRAVPMVEAMVALVLVDQL 408

Query: 181 MAQHGQCNLFPINPDLQSPIEPKVGVSKTTV 211
           MAQHGQCNLFPINPDLQSPIEPK   S T V
Sbjct: 409 MAQHGQCNLFPINPDLQSPIEPKREASNTPV 439

The following BLAST results are available for this feature:
BLAST of Cucsat.G17417.T8 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q428843.6e-9378.67Chorismate synthase 1, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CS1 PE=2... [more]
P577204.7e-9382.09Chorismate synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB1144 PE... [more]
P277931.4e-9281.86Chorismate synthase, chloroplastic OS=Capnoides sempervirens OX=3464 PE=1 SV=1[more]
Q428851.2e-8878.22Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CS2 PE=2... [more]
B7JVZ92.0e-7574.21Chorismate synthase OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=aroC PE... [more]
BLAST of Cucsat.G17417.T8 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149912.12.11e-144100.00chorismate synthase, chloroplastic [Cucumis sativus] >KGN47815.1 hypothetical pr... [more]
XP_008456472.14.91e-14399.05PREDICTED: chorismate synthase, chloroplastic [Cucumis melo] >KAA0036456.1 chori... [more]
XP_038885398.15.04e-13895.73chorismate synthase, chloroplastic [Benincasa hispida][more]
XP_022938712.12.56e-13392.89chorismate synthase, chloroplastic-like [Cucurbita moschata][more]
XP_022992638.12.56e-13392.89chorismate synthase, chloroplastic-like [Cucurbita maxima][more]
BLAST of Cucsat.G17417.T8 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDM61.02e-144100.00Chorismate synthase OS=Cucumis sativus OX=3659 GN=Csa_6G405290 PE=3 SV=1[more]
A0A5D3BM112.38e-14399.05Chorismate synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G... [more]
A0A1S3C3F02.38e-14399.05Chorismate synthase OS=Cucumis melo OX=3656 GN=LOC103496416 PE=3 SV=1[more]
A0A6J1JZT41.24e-13392.89Chorismate synthase OS=Cucurbita maxima OX=3661 GN=LOC111488924 PE=3 SV=1[more]
A0A6J1FEV41.24e-13392.89Chorismate synthase OS=Cucurbita moschata OX=3662 GN=LOC111444857 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000453Chorismate synthasePFAMPF01264Chorismate_syntcoord: 5..181
e-value: 2.0E-68
score: 230.6
IPR000453Chorismate synthaseTIGRFAMTIGR00033TIGR00033coord: 2..185
e-value: 1.9E-69
score: 232.2
IPR000453Chorismate synthasePANTHERPTHR21085CHORISMATE SYNTHASEcoord: 1..202
IPR035904Chorismate synthase AroC superfamilyGENE3D3.60.150.10Chorismate synthase AroCcoord: 1..202
e-value: 1.5E-88
score: 298.7
IPR035904Chorismate synthase AroC superfamilySUPERFAMILY103263Chorismate synthase, AroCcoord: 2..197
NoneNo IPR availablePANTHERPTHR21085:SF1CHORISMATE SYNTHASE 1, CHLOROPLASTICcoord: 1..202
IPR020541Chorismate synthase, conserved sitePROSITEPS00789CHORISMATE_SYNTHASE_3coord: 155..171

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G17417Cucsat.G17417gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G17417.T8.E1Cucsat.G17417.T8.E1exon
Cucsat.G17417.T8.E2Cucsat.G17417.T8.E2exon
Cucsat.G17417.T8.E3Cucsat.G17417.T8.E3exon
Cucsat.G17417.T8.E4Cucsat.G17417.T8.E4exon
Cucsat.G17417.T8.E5Cucsat.G17417.T8.E5exon
Cucsat.G17417.T8.E6Cucsat.G17417.T8.E6exon
Cucsat.G17417.T8.E7Cucsat.G17417.T8.E7exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G17417.T8.C7Cucsat.G17417.T8.C7CDS
Cucsat.G17417.T8.C6Cucsat.G17417.T8.C6CDS
Cucsat.G17417.T8.C5Cucsat.G17417.T8.C5CDS
Cucsat.G17417.T8.C4Cucsat.G17417.T8.C4CDS
Cucsat.G17417.T8.C3Cucsat.G17417.T8.C3CDS
Cucsat.G17417.T8.C2Cucsat.G17417.T8.C2CDS
Cucsat.G17417.T8.C1Cucsat.G17417.T8.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G17417.T8Cucsat.G17417.T8-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0008652 cellular amino acid biosynthetic process
biological_process GO:0009423 chorismate biosynthetic process
cellular_component GO:0005829 cytosol
molecular_function GO:0004107 chorismate synthase activity
molecular_function GO:0010181 FMN binding