Cucsat.G17248.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGGCCATGAATTTTATCCTTTGTTAATTAAGCTAACCGGAAGTCCCCAATGGCAACTTCCGCGGCTCAGCTCCATGCCTCCATACTCCATAATCACCACACTACTTGAAAGTTGTAATACAAGAACGCAATTCTATGGGAGCCGTTTCTCCATTCCTTGCATCCTCTCTACGACCCTACCGTTTCCCTTCTTCAACACAAACCCTTCTTTCTAACTTCGCTGCTTCTTCACAACTCCTTTCTTTTACTCCCAATTGCACAAAATTCCGCAGCAAAACGTTGGTTTTTGGGAAGCAATCAGGCAACGATAATGATTCTCAGTTTCTAGATGAAAATGGGGTCGTCAATGATATGGATGGATACTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTGCTTGGTTAGCTTTCCATTTCAGGGGTTTTTCTTCCTCCATTTTTACTCTCGCTTTCTGCATTTTTATGTTTTTATCGTTGGCTTTTCATCAACTATCTGAAATTTCTGTTATCAGATTAGTTTTTTTAGGTTTTCAGAGAATCACAATATTGGGATTTCGGAATTAGTGCTAACAAATCAAGGAATCATGAATTTCTATCTCGGTTTATTGTTTACAGCGAAAATTATGTATTCAGCAATGTGCTTAAACAATGTTGGGTCTTTTTCTTTTGTTTTTTAAGTTTAACATGGTGGGGGTCGGCTACATTTGGATTTCTAGTTGCAGAAGTTGAATGATTAATGATGGATTTTTTCTCTTAACAGTATTATGATGTTCTTAGTTAGACATATCACATATTGTTTACTGTTTCTATCCCATAGCATGTGCTGATTATGACATATTGTTCATCTCTTTACAAGTTTGGTCATGGGACTCATGACTGACATGTTTCTGTGGAGAATCATCCTCCTATCTGAGAATTTTAAGGCTGTGATTGCAATTATTTCAATTTCCATAATTACAACCTTCATTACAAAAGTGCTTTTTCTTCCATTAATGTTTAGTTTAGCTAGAATAATTTCTAGAGGGTAATGTAATGGTATGAAGAAGTTAGATAAGCTTTTAGTGTTTTATCCTTATCCTATACTATAGGCCACAGTTCACATGACTTCAAATGAATCAAAAAGCAACTGAACTCATTGATTTGGGGTTTTTAGAAAGAGTAAATGCATCAGTGCTAAAAAGGCAACTGGGACTCAATTTCAAAGCAGATTTCTGTAACGTTTAGATCTATGTACCTCTTTGTGCTTACGAGCATCTCGAATATTGCCTTTCTGTGTTCCTCCTCTTTGAATCTGCTAAAATGGAAAAAAAGAGAAGAAAAAGAAGAAATCTCTAATGTCCATGAAAACCGGCCGTTGCCAGTCCGGATTGGTTTGGTGAGAAATGAAATACTCTCTCTTAAGTGTCCGTCAAAGTTTTTAGTTTCAGTGTAGAATTCTTTTTTAGAGGATTGATATAATGGATTATGTTTACCACAACCCAATGATCTAAGTTTCTAAGTTGATTGGTGATTTACAATGGCATCATATCAGAAGGTCCTACGTTCAAAATCTTGTCATGTCATTTTTTAACTAATTAATTAATATTGATTTTCTTGAACCTTCTACAAATTTTCAAGCTCACAAATGAGAGGAAGTATTAGACTATTGATATAACTAATTAACTGATATCTTTTGGTTCAATTTGTGATATATCACTTTGCCATTACTTCGTGATTTTGATGTTCTTATCATGTTATCACAAGGTGTCAACCATGGACTATAACACTGACAGGATTGCTAGTGATTGCCTCTAGCTGGGTTGCTATAAAGTCGATAGCAGTGACCGCAGTCATACTCACGTTAATATGCTTATGGTGGTACATCTTTCTCTACTCATATCCAAAGGTTTGTGCATCAAATTATACAGCTCCTATATAACCCGTCTTTGATTAATTTTGAATTTGGTATTTGAATGTAGAATCACCGTTAATAGAATGGGACTCTGCATATTTTATGAATGCAAGATCACTTAGACAAAAGCGTCGATATTGGAGTATTTCTGATAGTATTTTACTTTTACTGCTAAAAGCGAACGAGAGGAAGAAAAAAGTTGGTTTTCTTTTACATGAGAAGGTTCTGTGCATTTGCAGGCTTATTCTGAAATGATTGCAGAACGAAGAAGAAAGGTTAGTGATGGACTAGAAGACACATTTGGTGTGAAAAGGACACAATGATTAGTTTAGAGAGAGTATATATGTGTTTACCAACTTTTGCTGATATCTATCTAAATTCTATTACTGATATTATCACTGATACACGGATATTAGTGATATCATTCGTAAATGATAAAGAAACAGGATTAGTTTTCATAATTGTGTTGATTTGTTCCATCTC ATGGGAGCCGTTTCTCCATTCCTTGCATCCTCTCTACGACCCTACCGTTTCCCTTCTTCAACACAAACCCTTCTTTCTAACTTCGCTGCTTCTTCACAACTCCTTTCTTTTACTCCCAATTGCACAAAATTCCGCAGCAAAACGTTGGTTTTTGGGAAGCAATCAGGCAACGATAATGATTCTCAGTTTCTAGATGAAAATGGGGTCGTCAATGATATGGATGGATACTTGAATTACCACTCTTTCGAATATGACTCCGTTTGGGATACAAAGCCTGCTTGGTGTCAACCATGGACTATAACACTGACAGGATTGCTAGTGATTGCCTCTAGCTGGGTTGCTATAAAGTCGATAGCAGTGACCGCAGTCATACTCACGTTAATATGCTTATGGTGGTACATCTTTCTCTACTCATATCCAAAGGTTTGTGCATCAAATTATACAGCTCCTATATAA MGAVSPFLASSLRPYRFPSSTQTLLSNFAASSQLLSFTPNCTKFRSKTLVFGKQSGNDNDSQFLDENGVVNDMDGYLNYHSFEYDSVWDTKPAWCQPWTITLTGLLVIASSWVAIKSIAVTAVILTLICLWWYIFLYSYPKVCASNYTAPI Homology
BLAST of Cucsat.G17248.T4 vs. NCBI nr
Match: XP_004140096.1 (uncharacterized protein LOC101202761 [Cucumis sativus] >KGN47908.1 hypothetical protein Csa_002752 [Cucumis sativus]) HSP 1 Score: 283 bits (725), Expect = 9.01e-96 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. NCBI nr
Match: XP_016900713.1 (PREDICTED: uncharacterized protein LOC103491324 isoform X2 [Cucumis melo]) HSP 1 Score: 254 bits (648), Expect = 2.18e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. NCBI nr
Match: KAA0057316.1 (uncharacterized protein E6C27_scaffold280G001610 [Cucumis melo var. makuwa] >TYK13419.1 uncharacterized protein E5676_scaffold496G00380 [Cucumis melo var. makuwa]) HSP 1 Score: 254 bits (648), Expect = 4.28e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. NCBI nr
Match: XP_008449434.1 (PREDICTED: uncharacterized protein LOC103491324 isoform X1 [Cucumis melo]) HSP 1 Score: 254 bits (648), Expect = 4.91e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. NCBI nr
Match: XP_023553740.1 (uncharacterized protein LOC111811218 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 238 bits (607), Expect = 8.36e-78 Identity = 117/141 (82.98%), Postives = 130/141 (92.20%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. ExPASy TrEMBL
Match: A0A0A0KED9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410630 PE=4 SV=1) HSP 1 Score: 283 bits (725), Expect = 4.36e-96 Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. ExPASy TrEMBL
Match: A0A1S4DXK9 (uncharacterized protein LOC103491324 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491324 PE=4 SV=1) HSP 1 Score: 254 bits (648), Expect = 1.06e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. ExPASy TrEMBL
Match: A0A5D3CTE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00380 PE=4 SV=1) HSP 1 Score: 254 bits (648), Expect = 2.07e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. ExPASy TrEMBL
Match: A0A1S3BLE6 (uncharacterized protein LOC103491324 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491324 PE=4 SV=1) HSP 1 Score: 254 bits (648), Expect = 2.37e-84 Identity = 127/141 (90.07%), Postives = 133/141 (94.33%), Query Frame = 0
BLAST of Cucsat.G17248.T4 vs. ExPASy TrEMBL
Match: A0A6J1HI50 (uncharacterized protein LOC111463803 OS=Cucurbita moschata OX=3662 GN=LOC111463803 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 5.49e-76 Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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