Cucsat.G16818.T9 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCTACCTCTGACAACTCACCACTCACTGTCCTTCATTCCCTTCGTCCTCTGTAAGATTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTATTGATTCTTGCTTATTGTCGGATCTGGATTCTGATTTACCCGTTTCTAGTATGGATGGATTTGAGCTTCGATGTTTGCATCGCTTTCTTGGGTTTACCCTACGTGCATGGGAAATTATTTTTGTGTTTACCGTGTAGGCTGAGGGGATTTAATAATTTTGGATTTCGATATCTTTTTCCTTATAGATTAAGTTCGAATCAGTGATTTATTACACTTTCATTTCCATATTTTAAGTTCCTGTTGATTGCCCTAATTTCTGATGCGAAGTGCTCAATCTAATCACTAATGCACATTGAGAAGCAATGTGTGAAGATGTGCAGTTTCTATCTCGATTTTTTATGTTTTATTTGATGACCGAACTGGAACCTGACTTTTTTTGTGTCCATTATAACTACGAGCAATTTCTAGTTCTTTAGTAGGATAGATTACTTGCTTGCATCACGATCTTTAAGAACTCGGCTAAGAAAGTGGATGCCGACTGTATTAGGTTTTTAAAGCTGTGTTTGTTGCAAGTGGTTTGATATTGATGTGCAATATTTTCTTTCTTTTTTTTATTTTTTTTAATTACTGGCCTGGTCTATATTCACTGGCATTCGATTATCCGTATCATATGGTTTGAGAATGATCGAGTTGTTAACTTGAAAGATGAGAAGAAGAATGCTATTGCTACACGTTTATTTATTGCTAGATAATGTTTTTTCAACGCTCAGCAGGTGGCCTCCTAGTAGGCAAGTTTATGAGCTGGGTGGATCATTACAGTGAAGTTCCAAGGGAAATTCTTGAATAGGTTTTTCAAACCCGACTTGAAACAGAAGTATTTCGTTAAAAGAATGCAGAATCAGGAAAATCTCGATGCAGATGGGAAAGCGGAGTCTGTAATATCCATTCAAACATCAGAATACGATTCCTGGGGCAATTTGGGTGATGATGATATCATGCTGCAGAAATCTGCAATTTTTGTTCAGGAAGCTGAGAAAGTTCCATTTGTCGGTGACAAGGCATGTTTCACCCAACTAAGTTTTAGTCTCCTGCATTGTCCTGTCTTGATCTTGCCACACTTTTTCCCTCCTCTTCCTTCACGTGTCTGTGTTATTTATGATTCTATGCATGTAGGAAACGGAGTTCTACTCCTTAGTCTTTCTTTCTTTTCCCATAAATTATGCTATGAAGTAGTACTCTTATTTTATTTGCTGCAACATGTTTGGGAAGTTCTCAAAACGTAACCTAGGTTTGGAAATTATTTAGAACTTAGAAATGTTTGTGGGATTCTGCATTGCTTTTTGCTTCAAAAGCCACCCTTTCTGTATGTTTAATGGCGTTTTTGGTGTCTAACCTTTGGGCCTACAGTTCTAACCCTTTTTATCATGTTTTTGTTTGTTCTTAATTCGTATCTTAACAATTGGAGGTCCATCTTATTAGTTATTATTTTTCCTACTTTATTTTGGCTTGGCTCTATTTTTTCATTTTCATTTCCTGAAAGTGAATCTGTATTCTCTGCTTTTTCCACTCTTTTTACTCCTTTTGGAGTTTGTATTCTTTGAGCAATAGTCTCTCTGTTCAAAGTAGTTCTTTCTCTTGTTTTTTAGGGGTGGAAAGGGACTCTTGTGATGTTTGGGCTTGGTGAAGTTTCAAGCTTCCCTTTGGGCTTCAATTTTGAGGACTTTTTGTAATTACTCTTTAGTTTACATTTTACTTTCTTGGTCCACTTTCTCTAGTAGGGCTTTTGTGTGCTTGGTTTTTTGTATGCCCTTGAACTCTTTCACTTTTTCTCTATGAATAGTTTTCCATAAAAAAATTTAATTAAAAAAGAAAGAAGTGAATGACTCTTTGAAAGTTCTTTTTACCTTTTTAACGTATGTTTTGAATGCCTTACAACTGTGGCCTTGTAGTAAGATGTTTTTATCAGTTAATTTTTCTTTTACTCCGTAATGAATCTTAATGGCAATGGTTTTGCAGGAACCACTTTCTTCTTTAGAAGCTGAATATAAATCGGGAAGTCCAATTTTGCTGGAGAAAATTAAGGTTTTACTTGTTGCTTATTGTTATTTTAGTAGAGTTGTCCTTGGAATAATTATTTATGTTACATGTTATGCAGGTGCTCAGTGGCCAGTATGCTGCCATTCGTCGAACACGTGGTGATGGGAACTGCTTTTTCCGAAGCTTCATGTTTTCTTATCTTGTAAGTTTAATTCTTTTAATTTATCTCATTTACTTTGCTATTATACTTTTTGTGCATCATCGAGCATCAGCTGTTACTGACTTGGCCTCTCAAATCAGGAACACATTTTAGAGTCACAAGACAAAACTGAAGTTGATCGCATCAAAACAAATGTTGAAAATTGTAGGAAAACACTTCGAAGTCTGGGATATACAGAATTTACCTTTGAAGATTTTTTTGCGGTAAATTCCTACCATTCCTTTTTTTTTTAAAAAAAAACAATTAATCTATTGCACATTATCGCCCTATGCTCTAAGCAGTATGGCTTATTTCTTCCATTCAACTGGAATTGGTGGAAGTTGAGAACTATTCATACTAGTCTCTAAATGTGTTATTGAACATACCATATATAAATATTGTGTAAGATACTTAATTAGGGAGATTGGTATGGTATTAGTAAGGGGCATAAGGGCAATTAGATTGGGAGTTGATGTATCTTGTTATAAATAGGAGAGTCAGTGAGGGAAGGTGCCCAGCAATTGTCGAGTGTTATAGGGCTTGGGATGCCATACTCAAGAGGAAGGTTCCAAGTGCCTTATATTGGATTATCTCGTAGTTCCATCTTTATCAATTTTATTGTTGTTGAGATGTTTTCTTTGCAGTTTGTGATGGTATAGTAGGTTTATTTTCCCTTTTTTGAACCTTTCCATCTAAGTATGTGCTTTCTCTCCAATTGATGGATATGAATGAGGAAATTAGACCAAACTAAAGAGGACTATAGGGGGCTGCAAGTTCAATGATGGAAAGGTGGTGATGAGAATCTATTAATGAAATTGGCCCCTCCACTTTGTAATTTCATCCATTAATGAAATTGTCTCTTAACAAAAAGAAAAAAAGTGGTGATGAGAATCTATTTTTTGTGATGCCAGATTTAACATTAACGTCATTGCAATGACATCTCATATTGAATTAACTTTGAATACGAACATTTTGTATATTATGTCTTTACCTCATCGAAGTCCAGTCTTTTTCATAACTCATATATAGACTCTAGAGCTATTCTTTAAAAATGTGTGGACCAACTTTTAAATACATTGTTCCAGATTTATACTACCTTAAAGATGTCTAGAGCCTAGACTCGTCCTTCTTTATTATTGCTGTCTTTGTTTCATTTTGGTATAAACTGGCTAGATATCCTTGGTGGTTAATGATGGGTGCCATAAATATAAATTATTTATTAATAAATATGTTTAAAATATCTTTACAGCTATTCCTTGAGCAGCTGGAAAGTGCTCTTCAAGGAAATGAATCCTCTATAAGGTGTCAATGACCTGCCCTTCTACCTTGGAATTTTGATTCCTGAATTTTTAGTTGATAGTGCAATTTTCTGTTGCCATCAATTATGAAATTTTGCCATTCATGATTGCATTTGACTCTTATTTTTCTTGGATGCAGTCATGAAGAACTTGTTATTAGGAGTCGGGACCAGTCTATCTCTGATTATGGTCAGTGATGTTTTATATTCAATATTGAATTCTCTCTTTCCATTTCTACTGACAAAATTGTTTTTCTAGTTGTTATGTTTTTCAGGTTTGTTACATCAGGTGAAATACAAAAGCGTTCAGAATTTTTTGAGCCTTTTATTATGGGATTGACAAATGGAACGGTTGATCAGGTTTCCTAAATTTTTAACCCCTATAAGTTTTGCATTATGTTTTGACTTTTATCTTTAGATTTATGTTGGAAATTCAACCCTACAAGATATTTGAAATCTAAGCTGATTTGGCTAGGTGAACCCTTTTACAAGTGTAGTTTCAAGCAGAAGCAGCTAATTGTTATAAAGCAATAATGATGATTTAGACCATGTATACCTTGGACAGGAATAAGAATGGATATTTACGATTTCCGCTCTTGTTTACTTCTTCTTGGGATTGGAATAAGTATAACCCACTTAAGAATGTAGAACCTTGCTCTTATTTTGGAGCAACATCTTTACTTCATAATAGATAACCATTCTCTCTCCTATTGCTGTTCTATGGGTTCAAAGTCTTTTCTGTGGGTCTGTTGACCTTTTTTCCTCATTCTAAAAATCTAAATGTTAACAAACAATATCGTATCAACCACCGTTTTCTTATTCCAGACTTCATAATAATTGTAGTAAACAAAGTTTCAGAAATTCTATTTCAAATCCTTTTTTTTTTTTCTATTCAATCAGACATGATGGATTGCCATATGGTTTTATTCCCTCATTAAATAAACTAAGCCTTGGGTTCATGATTTTATCATCACATTTATATTTAAATGAAATCACTTTAGCCTTATTATTTCCCTTTTTTTGAGTGCACATGTGGGGATTTAAACTTTTCAACCTTGTTTCCATTTCAAAAGAAAAAAAAAAAAAATTTAAACTTTTGACCTTTTGGTCTGCTATTATTCCCTTTTTGGTGGATCAGAATCCCAAACAACAGTAAGCCTTGGTCTTTGTGTTTGGGGGTTAACTTTTCCAAGGGTTGGTCACTTATGATGATAATTTTTAGTTTTTGGTTTGGTGGGGAAACTAGACATAGACCTGAACATGGTTGGACTCGTATTAACTTTGTAAAAAGTCAAATGAACATTTAATTTCTTATTTAAGAAGAAAGAGAACCTATTTATCATGACTTCCAATCTCATCCTCTTTGGCACAGTTCTGCAAGACAGCAGTTGAACCAATGGGTGAAGAGAGTGATCATGTACACATAATTGCCTTATCTGATGCTTTGGGTGTGCCGATTCGTGTTCTGTACCTTGATCGAAGCTCCTGTGATTCTGGTGGCCTCAGTGTAAACCACCATGATTTTGTTCCTGCTACCACTGAGGTCGCAAGTGGTAGTGCTGCCTCTGAGATAAAGATCCCTTTCATTACTTTGCTCTATCGCCCTGGTCATTATGATATCCTTTATCCAAAATGATGGTAAACTTCTCTCACGAACTTATTGGAAAATTTTCCATAGAAATATCACTTCTTCCCCACCTATTATATGCAACAGATCAAATTTAATCTTTATAAAATGTTGATGTTTAAGAATTAAGAGTATATTATGGCTGCCATATCCTCATTCCGCATGCAAAAATGATATTTTCATCTGTAGTTGTCTACCGTTATTTGCAAATTTGTTCAAGTCTTTGATTCACTTGAGGATTTTTGTTCTGGGTGGTTCAGCTTGAATTATATGTTATTTATTTCAGGGTGGTGGGGCTCTCAGAGTTGAACTGCATTGACACGGCGGACATGGATCCAAGCTTCGACAAGATTAAAGGTTGGATCTTCATAATTGCTAGATGTTGTTCTGTACTGATTTTAATTACTGATGAGCTTGTTTGAGTAAAAAAAGAAAGGAATTATATTCACCAGTTAACTGAAATTTGAAATATACATGTGAATCAGTCTTCGAGTTTTTCAGTCATCTTGCAAATAGATTTCCTTACACAATCTCTTAGAATGTTTGAGAATTGAGATATAGTATTTCAATCCAATTTCAATACAGGGACACTATTACTTGGGGTGATGTTCTTAAATTCTAATAACTTACAATTCAACCCTAGGATTTAGAGAAGTTCATATTTGTATATGTACATTTTGAGCCAAAATGGATGCATCTTGCTATGATTTCAAAAATATATTAGTAGCAGAACATATTCTCAGTGATTGAAGTTTTTGGTGTATTAATGT ATGCAGAATCAGGAAAATCTCGATGCAGATGGGAAAGCGGAGTCTGTAATATCCATTCAAACATCAGAATACGATTCCTGGGGCAATTTGGGTGATGATGATATCATGCTGCAGAAATCTGCAATTTTTGTTCAGGAAGCTGAGAAAGTTCCATTTGTCGGTGACAAGGAACCACTTTCTTCTTTAGAAGCTGAATATAAATCGGGAAGTCCAATTTTGCTGGAGAAAATTAAGGTGCTCAGTGGCCAGTATGCTGCCATTCGTCGAACACGTGGTGATGGGAACTGCTTTTTCCGAAGCTTCATGTTTTCTTATCTTGAACACATTTTAGAGTCACAAGACAAAACTGAAGTTGATCGCATCAAAACAAATGTTGAAAATTGTAGGAAAACACTTCGAAGTCTGGGATATACAGAATTTACCTTTGAAGATTTTTTTGCGCTATTCCTTGAGCAGCTGGAAAGTGCTCTTCAAGGAAATGAATCCTCTATAAGTCATGAAGAACTTGTTATTAGGAGTCGGGACCAGTCTATCTCTGATTATGTTGTTATGTTTTTCAGGTTTGTTACATCAGGTGAAATACAAAAGCGTTCAGAATTTTTTGAGCCTTTTATTATGGGATTGACAAATGGAACGGTTGATCAGGTTTCCTAA MQNQENLDADGKAESVISIQTSEYDSWGNLGDDDIMLQKSAIFVQEAEKVPFVGDKEPLSSLEAEYKSGSPILLEKIKVLSGQYAAIRRTRGDGNCFFRSFMFSYLEHILESQDKTEVDRIKTNVENCRKTLRSLGYTEFTFEDFFALFLEQLESALQGNESSISHEELVIRSRDQSISDYVVMFFRFVTSGEIQKRSEFFEPFIMGLTNGTVDQVS Homology
BLAST of Cucsat.G16818.T9 vs. ExPASy Swiss-Prot
Match: Q8LG98 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 OS=Arabidopsis thaliana OX=3702 GN=OTU1 PE=1 SV=2) HSP 1 Score: 290.0 bits (741), Expect = 2.2e-77 Identity = 147/215 (68.37%), Postives = 174/215 (80.93%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy Swiss-Prot
Match: Q96FW1 (Ubiquitin thioesterase OTUB1 OS=Homo sapiens OX=9606 GN=OTUB1 PE=1 SV=2) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy Swiss-Prot
Match: Q7TQI3 (Ubiquitin thioesterase OTUB1 OS=Mus musculus OX=10090 GN=Otub1 PE=1 SV=2) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy Swiss-Prot
Match: B2RYG6 (Ubiquitin thioesterase OTUB1 OS=Rattus norvegicus OX=10116 GN=Otub1 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy Swiss-Prot
Match: Q9VL00 (Ubiquitin thioesterase otubain-like OS=Drosophila melanogaster OX=7227 GN=CG4968 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 3.9e-26 Identity = 69/178 (38.76%), Postives = 104/178 (58.43%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. NCBI nr
Match: XP_004152159.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Cucumis sativus] >XP_011653009.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Cucumis sativus] >KGN52967.1 hypothetical protein Csa_014673 [Cucumis sativus]) HSP 1 Score: 421 bits (1083), Expect = 4.11e-147 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. NCBI nr
Match: XP_008454143.1 (PREDICTED: ubiquitin thioesterase otubain-like [Cucumis melo] >XP_008454144.1 PREDICTED: ubiquitin thioesterase otubain-like [Cucumis melo]) HSP 1 Score: 417 bits (1073), Expect = 1.37e-145 Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. NCBI nr
Match: XP_038896692.1 (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida] >XP_038896698.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida] >XP_038896706.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1 [Benincasa hispida]) HSP 1 Score: 415 bits (1066), Expect = 1.60e-144 Identity = 210/215 (97.67%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. NCBI nr
Match: KAA0044504.1 (ubiquitin thioesterase otubain-like [Cucumis melo var. makuwa]) HSP 1 Score: 404 bits (1039), Expect = 4.46e-140 Identity = 208/215 (96.74%), Postives = 210/215 (97.67%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. NCBI nr
Match: TYK29632.1 (ubiquitin thioesterase otubain-like [Cucumis melo var. makuwa]) HSP 1 Score: 404 bits (1037), Expect = 8.99e-140 Identity = 208/215 (96.74%), Postives = 210/215 (97.67%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy TrEMBL
Match: A0A0A0KX37 (Ubiquitin thioesterase OS=Cucumis sativus OX=3659 GN=Csa_4G007720 PE=3 SV=1) HSP 1 Score: 421 bits (1083), Expect = 1.99e-147 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy TrEMBL
Match: A0A1S3BZ50 (Ubiquitin thioesterase OS=Cucumis melo OX=3656 GN=LOC103494633 PE=3 SV=1) HSP 1 Score: 417 bits (1073), Expect = 6.63e-146 Identity = 212/215 (98.60%), Postives = 214/215 (99.53%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy TrEMBL
Match: A0A5A7TN16 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G002440 PE=4 SV=1) HSP 1 Score: 404 bits (1039), Expect = 2.16e-140 Identity = 208/215 (96.74%), Postives = 210/215 (97.67%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy TrEMBL
Match: A0A5D3E124 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G002440 PE=4 SV=1) HSP 1 Score: 404 bits (1037), Expect = 4.36e-140 Identity = 208/215 (96.74%), Postives = 210/215 (97.67%), Query Frame = 0
BLAST of Cucsat.G16818.T9 vs. ExPASy TrEMBL
Match: A0A6J1GWQ8 (Ubiquitin thioesterase OS=Cucurbita moschata OX=3662 GN=LOC111457855 PE=3 SV=1) HSP 1 Score: 397 bits (1020), Expect = 7.80e-138 Identity = 199/215 (92.56%), Postives = 209/215 (97.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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