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Cucsat.G1658.T13 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATAGACTAAGGTTTTCTTTTTTTTCTTTTTTTCTTTTTACCAGAAAATCGAGGTGTTCATTATTTTGATCACAGCTCCTCCAGCTCTAAAACAGTCTTTCAATGGAGGTTCAAGCTCCAAGCTTCTCAACTACCTTTGACCGTGTCTCAATCAACGACACATCTCCATTTTCCTATTCCTTAAACCGCATTCACCTTCCATTTTCCTCTCCTCGGACCGAAATGCCCCATTCTCCAACCGCCACCGATTCCACCTCCCTTCGAAATGGCTTTCCCTCCACATCTAACACCGATGGAGCATTTCCTCCCTTCCCCTTGAACTCTTCTCCCATCCAATCCCTCGCCGGACTCACACAGCCGACCGCTGCCTTGAAACTGCAGAAGGTCTACAGAAGCTACCGCACTCGCCGGCGGTTGGCCGATTCCGCCGTTGTGGCTGAAGAACTATGGTAAGCCCACATTTTGTCATTTGGGTATTTTGTGCTCTTTTTTTCTTTTGATTTTTGAAAATGTGTGTAATGGGGTTTGTGATGTGAAGGTGGAGAGCTATAGACTATGCCAGATTGAATCATAGTACTATTTCTTTCTTCAATTTCTCCAAACCTGAGACTGCAGCTTCTCGATGGAGTCGAATTATGTTAAACGCTTCAAAGGTATGGATTCAATAGGAAGTGATGTTTTCTGGGTTTGGTTTATTTTTAACATTGTTGAAGTTTTTCTTTTCTTGGGGATTTTTGTTTTTTGAAGGTGGGTAAGGGATTGTCGAAAGATGGAAAAGCACAGAAGTTAGCCTTTCAGCATTGGATCGAAGCTGTAATTTCCATTAATCTCTGGAAGTGGGTTCTCTCTTCATTTTGTTTCTTTTTTTTGCTTTGTTTTTTTGATGAACGATTTTGGTTTGCAGATCGATCCACGGCATCGTTATGGGCATAACTTGCATCTGTACTACGAAGAGTGGTGTGAAGGCGATGCCGGTCAGCCTTTTTTCTATTGGTGAGAAACATTTGTTAGCTCCACATACTTCATATTAAAACATCTCTCATTTTCTTTTTTGCTTTTTCTAATCCTTCTTCTTCCTAATCTCTGGATGATGGATTTGAGTTAATATGTGATCTAATGTTATTTACTCCTCAATTAATATTGATGATTTCCCTCTAATCAGTTTTCTAAAATTTTAAACCCAAGTATTTAAAGTGTTGATATAGTATTAAATAGAAAATACCAAGTACTCCTATAGATCGAGGAGTGTTTGATAAGAAACCACCCCAAGGCAAATTTTGTATTTTTCAAGATAATAATTAAAAAATTTCCATGTCGCTATGGTAATGAGAACCGTTAGATTAAGTGCAATAATTTATTCCTGAACTTGAACTTAAACTTAAACTTGGTATCATTAGACTATGATACAATTGCGGCCATGAATTTCTAGTGTAATTTGTTTTTCTAAAAGAATAATACACGATTAAGCTCATGACATAATTTACATAATAATATTTAACACTCCACTTTGGCATGGACATGAAGATTTGTAGAAAACCTTGAAAATCAATATTAATAGAAAAGAAACTTGAGGACATAAAAATTTGTAGAAAGACCCAAGTGGAAATCAAAATGAATAGAAAAGGAAAAAAGATTATTGAAATTTAAATAATTTTTTCTTTTTTTTACGATAATAAAGTTGATGGGTCAATGTAAATTTAATTACATCAAACACTTTTAATGATAATATTTGCTTAGTTTGATCGTGAGCAAAAAAGTTCAATGGTAAAAATGTTTTAACAGTTTTTTAGCAAGAATGTTTGCTAATCAATGACTCATTATGTTAATATTAATTTCACTCTACAGGTTGGATGTAGGAGATGGGAAGGATTTAGAATTAAATGAGTGCCCAAGATCGAAACTCAAGCAGCAATGTATTGTGTATCTTGGACCTGTAAGTACTTTCGTTTATTATAATTCCATTAAAACGTAGATAAGTACTTATTCCTTTTTCTTTTGTTTCAACAATGATTAACACTTTTGTCAAGGTTGTTTTCAGCAAGAGAGGGAAAATTATGAATACATAATTATGCATGGAAAAATCATCCACAAACAATCTGGAAAACTCTTGGATACAAACCAAGGATCTCAAGGAGCAAAGTGGATATTTGTCATGTCCACAACCAAGATACTTTATGCTGGTGAAGTGAGAATTCAACACATGTTGCCCTTCATCATATTTTGTTTCTTGGCAATGAAATAAACAATAACTTATCAATGTCTTGCAGAAGAAAAAGGGAATGTTCCATCACTCTAGCTTCTTGGCTGGTGGTGTAACATTAGCTGCTGGAAGGCTGGTAACCGAGGATGGAGTTCTTAAGGTAGGGAGAAATTACTTAATGCTCAGATCTTTTAATGTTAGTTTCCTGATTTAAAAATGATCTGATGTAAATGGTTTTGTTGTTTAGGCTATTTCGGCATACAGTGGACATTATCGGCCAACAGATGTCAGTCTTGTCAGTTTTTTATCATTTCTTCATGAGAATGGAGTAAATCTTGATGAAGTCAAGGTATTTCTCTAAGAATTCCAATGTTGTGGGAATATGAACCTAATGAAGGTGATATGGGCTCATGATCAGCTTTTCACCTTTCTGTTGTATGTCTTTAGATCTACAAGGCCAGGGATGCTTCTGAAAGCTACAACCAAGAAGGTGGAGGCAACTTTGAAGATTCTCCTAAAGCAGATATCTTAGAGGTAGATGAGAATTGTATACCATCATCACGCCAATTAGCTGAAGTTTCCCGAACTGAAAAAAGAACAGAATACCAAAGAACCTTATCTGGAGGTCTGCCGAGTCCAAGAGCCGAAGTCCCTACGACTGCCATATTGCAGAGAATAAATTCCAAGAAAACGGCAAAATCATATCAACTGGGGCATCAATTATCACTTAAGTGGACAACAGGAGCTGGTCCGAGAATTGGTTGTGTAGCTGACTATCCCGTGGAACTTAGAGTACAAGCCTTAGAGTTTGTTAATCTATCTTCAATAGATCCCACAACACAAGGTTCAAATGTTGCATCAATTGCTGTAAATCGCCCTTCAGAACTTTGCAATGGCTATCGGGATCATTCCTCTGAAAAGTAAACTAATATTCCTCCTCCTTTCTGTGCTTAATGCTTAATATATAGTATGCATGTACTATGTATCTATCTGTTGTCCATTCTCACTTTTTTGTGGGCGAATATTGAATCCTTGTTGACATTATAATGCCTCTCCAAAGCTTTCTCTACCCTTAGATATCAATACAAAAACGTAATGTTTTCCTTGTGCGAACCTGTAGATTCTTTGAAAGTGTAATTTACCAAGGTGATAGCTTACTGATGACCGGTCCATGATTTTGTGTTGCAAAACTATGCAAACCATATATATAAAATCTTTTTGATCTTTCATTAGAGTACTGTGATCGTCTAGCCAAAGTAAGTTTCTCAATGCCCTTCTCGTATAAACTAAGAAAACAAAGTACCGGTTGTTAGACAAAAATGAA ATGGAGGTTCAAGCTCCAAGCTTCTCAACTACCTTTGACCGTGTCTCAATCAACGACACATCTCCATTTTCCTATTCCTTAAACCGCATTCACCTTCCATTTTCCTCTCCTCGGACCGAAATGCCCCATTCTCCAACCGCCACCGATTCCACCTCCCTTCGAAATGGCTTTCCCTCCACATCTAACACCGATGGAGCATTTCCTCCCTTCCCCTTGAACTCTTCTCCCATCCAATCCCTCGCCGGACTCACACAGCCGACCGCTGCCTTGAAACTGCAGAAGGTCTACAGAAGCTACCGCACTCGCCGGCGGTTGGCCGATTCCGCCGTTGTGGCTGAAGAACTATGGTGGAGAGCTATAGACTATGCCAGATTGAATCATAGTACTATTTCTTTCTTCAATTTCTCCAAACCTGAGACTGCAGCTTCTCGATGGAGTCGAATTATGTTAAACGCTTCAAAGGTGGGTAAGGGATTGTCGAAAGATGGAAAAGCACAGAAGTTAGCCTTTCAGCATTGGATCGAAGCTGTAATTTCCATTAATCTCTGGAAGTGGGTTCTCTCTTCATTTTGTTTCTTTTTTTTGCTTTGTTTTTTTGATGAACGATTTTGGTTTGCAGATCGATCCACGGCATCGTTATGGGCATAA MEVQAPSFSTTFDRVSINDTSPFSYSLNRIHLPFSSPRTEMPHSPTATDSTSLRNGFPSTSNTDGAFPPFPLNSSPIQSLAGLTQPTAALKLQKVYRSYRTRRRLADSAVVAEELWWRAIDYARLNHSTISFFNFSKPETAASRWSRIMLNASKVGKGLSKDGKAQKLAFQHWIEAVISINLWKWVLSSFCFFFLLCFFDERFWFADRSTASLWA Homology
BLAST of Cucsat.G1658.T13 vs. ExPASy Swiss-Prot
Match: Q9LFA4 (IQ domain-containing protein IQM3 OS=Arabidopsis thaliana OX=3702 GN=IQM3 PE=2 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 4.8e-37 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy Swiss-Prot
Match: Q9LHN9 (IQ domain-containing protein IQM2 OS=Arabidopsis thaliana OX=3702 GN=IQM2 PE=2 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 8.3e-29 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy Swiss-Prot
Match: Q9M2G8 (IQ domain-containing protein IQM6 OS=Arabidopsis thaliana OX=3702 GN=IQM6 PE=2 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 4.1e-28 Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy Swiss-Prot
Match: O82645 (IQ domain-containing protein IQM1 OS=Arabidopsis thaliana OX=3702 GN=IQM1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-26 Identity = 59/90 (65.56%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy Swiss-Prot
Match: O64851 (IQ domain-containing protein IQM4 OS=Arabidopsis thaliana OX=3702 GN=IQM4 PE=2 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26 Identity = 64/120 (53.33%), Postives = 80/120 (66.67%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. NCBI nr
Match: XP_004143311.1 (IQ domain-containing protein IQM3 [Cucumis sativus] >KGN48247.1 hypothetical protein Csa_003102 [Cucumis sativus]) HSP 1 Score: 351 bits (901), Expect = 1.47e-116 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. NCBI nr
Match: XP_008462553.1 (PREDICTED: IQ domain-containing protein IQM3-like [Cucumis melo] >KAA0025274.1 IQ domain-containing protein IQM3-like [Cucumis melo var. makuwa] >TYK07393.1 IQ domain-containing protein IQM3-like [Cucumis melo var. makuwa]) HSP 1 Score: 328 bits (841), Expect = 1.50e-107 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. NCBI nr
Match: XP_038882510.1 (IQ domain-containing protein IQM3-like [Benincasa hispida]) HSP 1 Score: 310 bits (794), Expect = 1.84e-100 Identity = 159/177 (89.83%), Postives = 163/177 (92.09%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. NCBI nr
Match: XP_022925577.1 (IQ domain-containing protein IQM3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 271 bits (693), Expect = 3.74e-85 Identity = 145/188 (77.13%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. NCBI nr
Match: XP_023543238.1 (IQ domain-containing protein IQM3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 271 bits (693), Expect = 3.84e-85 Identity = 145/188 (77.13%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy TrEMBL
Match: A0A0A0KIL9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G451500 PE=4 SV=1) HSP 1 Score: 351 bits (901), Expect = 7.10e-117 Identity = 176/177 (99.44%), Postives = 177/177 (100.00%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy TrEMBL
Match: A0A5D3C659 (IQ domain-containing protein IQM3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001170 PE=4 SV=1) HSP 1 Score: 328 bits (841), Expect = 7.27e-108 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy TrEMBL
Match: A0A1S3CH85 (IQ domain-containing protein IQM3-like OS=Cucumis melo OX=3656 GN=LOC103500884 PE=4 SV=1) HSP 1 Score: 328 bits (841), Expect = 7.27e-108 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy TrEMBL
Match: A0A6J1EC28 (IQ domain-containing protein IQM3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432970 PE=4 SV=1) HSP 1 Score: 271 bits (693), Expect = 1.81e-85 Identity = 145/188 (77.13%), Postives = 152/188 (80.85%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. ExPASy TrEMBL
Match: A0A6J1EFL1 (IQ domain-containing protein IQM3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111432970 PE=4 SV=1) HSP 1 Score: 266 bits (681), Expect = 6.20e-84 Identity = 142/183 (77.60%), Postives = 148/183 (80.87%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. TAIR 10
Match: AT3G52870.1 (IQ calmodulin-binding motif family protein ) HSP 1 Score: 156.0 bits (393), Expect = 3.4e-38 Identity = 74/90 (82.22%), Postives = 84/90 (93.33%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. TAIR 10
Match: AT3G13600.1 (calmodulin-binding family protein ) HSP 1 Score: 128.6 bits (322), Expect = 5.9e-30 Identity = 59/90 (65.56%), Postives = 74/90 (82.22%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. TAIR 10
Match: AT3G58480.1 (calmodulin-binding family protein ) HSP 1 Score: 126.3 bits (316), Expect = 2.9e-29 Identity = 66/118 (55.93%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. TAIR 10
Match: AT4G33050.1 (calmodulin-binding family protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28 Identity = 64/101 (63.37%), Postives = 75/101 (74.26%), Query Frame = 0
BLAST of Cucsat.G1658.T13 vs. TAIR 10
Match: AT4G33050.2 (calmodulin-binding family protein ) HSP 1 Score: 123.6 bits (309), Expect = 1.9e-28 Identity = 64/101 (63.37%), Postives = 75/101 (74.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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