Cucsat.G16490.T1 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G16490.T1
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Embryo defective
Location	ctg2387: 220158 .. 224022 (-)
RNA-Seq Expression	Cucsat.G16490.T1
Synteny	Cucsat.G16490.T1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGGAGACCCAATATTTGGAGACCCCATATTTTTCCAAAATACAAAATCTATAAAATAGGATAATAAAATTGACTTTTAGTTTTGATGGTTTTTCTTTTAAAAAGTAATTTCGATTTAGTTTTAGCAATTCTTCCTTCCGTATTACCGTGGGGAGCCGGCAGCGTATTTGGGTCCCGTCATCTTAAACCCTTCTATCCAAGTTCAGGTTTTTCTTCGCTGGAGCTCAGATTTTCTCATGTCTTATAGTCTCTGAGAAGAAACCCTCCTTCCAAAATTGTGTTTCCTCTATCAAAAGCTTCAATTGAGGTCCAGCTATGGCGACCCACCTGCTTTCTCCGCCCACCCACTTTCAAACTTCCATGAAACTGGCCCTTCACGCCCCGTTTCTTCTAGCTCCCAGTGTAAGCTCCACCACCCTTTTCTCTTTCTTTCTTTTCTGAAGTATCTTCTGTGAAGCTTGATTTTGTGGGTGGGATTTTAAGAGCTTGGTTTATAGTTTTCGAGAATGCATTTGTGTTGATGGAGTTAATTGGTAGTCGAGAAACGATGTTGATTGAATTTATGGAATAACCTTTATATGAATTTGTGGGTGATGGTGATTGGTGATTTCAAAACTCAATTTGAAGGAAAATAGTGTTGCTGTGAAGGAAAAGAGGTATAGACTTATCTATTTTAGCTTCTCATTGCCATGAAGGAAAGGAGAGACCATTCAAGAGGGAAGAATGCTGAAGACTGTGGTTATCATAAGGGTGCATCTATGTCTGAAATGCATATAGAATGATTAAGTTCATCCTAGCTTATTAGCTTGAACTTTTGAGTTTAGTCATTAGTGTTAATTGAACGTGATGATAATGTGGGGGCTCTCGTTCAAACTCATATCATGTTATTTCCTCTATATTCAACATTAATGGCCTATGGCTTGAACTTTCTGAATTGAATGAATATCCAGGTCTAAACTAGAAATGACTGAATTTGCTTTAGTTTGTCTTCTAATATTTGTGGGTGAAAGTGGTATTTTGGTCAATGGTGAACAGATATGCATCTTCTGCTTTTAAAATTTAGACTGTCAATTCTGTGATGGATTTGCATTCTGTTTAATGAATTTTTTTCAACTTTTTCTTGAGGCACCTTTTGCTTAGCCTGTTGCCTTTTCTTTTTCTTAATTTCTGTTTTTCAACATAACTGACGTATCCAAATTTATATGTCAAGACATTGTTGGTTGAGTCATGTTGTCTCGAGCAATTTGTTTACAAAAGTTATTCCTGTTGTAGCGACGGTCACCAGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGATTTCAGAATGCTGGATCAGTGGTCTCTTGTGCTATGAATATGACTGCAGGACAATCAGACGATTCAGGAAGGGTAAATTGGGATAGTTTGAAGAACAGGGTAAAACAGCTTTGGGAAAGTTCACCAGAGCCAGTGAAGTCTTTCCCTTGGAACGAGGCATTGGATAACTTCATCCAGCTTATTGCTGATCTCATCTTGACGGTTATCAAGTACTTGTTTGTACCATTACTCCTCGTTACCTCCCTTAGCGAGATGTCTTACTGTGCTCATGAAAAGAAGCTTCTTATTGTCCCATTTCTATTTATAATTGGCTTCTCCGTTGCTGAGGTCATGAGACAGACAGCTTTAAGTCTATCTCCAATTCTTAAGGTAAGATTTTAGTATCACCTCTCCATTATGTGTGAGACGTTAGTTGAATGGATTATTGACGAAGCATTCGTCTGATATCATCCATTTTAGTTCTGTTTTTATGTCATCCTTGTTGAGGCTTTGATAATAACATTTTCTACTATTTATGGATTAGGTAAATAATTCTTATATGCGGGTGAGGCAATTGAAAATCATTTTCCAATTATTAACCAAGTAAAATTGAAAATCATTTCAACTATCTGATGTTGCACTTGTTATTTCATTTCCTTATTGTTTTTTTAGTCAACTCCTCCATGTTATTTTTTTGTCTTTGTTGCATTTTTCATTTTGAACAATAGTCATTTTCGAAATGCTATTAGCTTGGAATGTTTGAACATGTTTTATTAGGCTTCCCGTTGATTATTTTTCTTTGGAACACACTCTAAAGCTTGCCCTCTAGTTGGAATACAATTTAAAGAGCTGTTTGAAATTCTTCATTGGCCTCTAATTTCTACTATCTACATTGTCTATGTGGATACTTTTCATCTTGGATGCCTTAACTGTAGTGGCAAGTAGGAATAATGATCTCTTGGGGGATTCAGTAGGTTTCTGAGGTTGTCTTATTAATCATGGATGAACTCCTTTTCTGAACATTTCGTAATTGTTCCTTTTATAATTGTTTCTTTCTAAAATAGAATGGCAAGTTAATAGTCTTTTCTATTATCCACCGTTTTCCTTTTTTCCAGGATCTAGAAGTACCTTGGCATTTGATCACAATTGCAATATTCTTCACTCTCATTAAACTGCCCGGCCCATCCTATCCATATTGGGGTCGCATATTCTTTCCTCACTTGGCAAATGGAGGTTTGGTCAGAACTATATGGTCTATGTTTCTCTGGTTTAGAAGACCCCGAAAGACATCGATGTTGCTGAAGCATAACGAGAATCACCTGGATACGAAGAAGAATTAATTGAAATCGCATATAGAACAATGGACCAGGTATTACTACTAAGAGTAAAAGAAGAAAAAAAAAGTACTGTTGCTCAATGCTTGTTAGAGTCTAATTTCATTATCATGCCCATGTGAGGAATAATAATTATGACTTGGGTGCCTCAAATATTGAGGCCAGATTTAATAGTAGCTTTCTGATAGGATTCGTATTGGTAATAATCAATCTTATTAAGGTATCAAAGATATGTCAATAATTAGTTAGGAGAATTGTTTTCAGCAGGTGGGAAAAGTTACAGCGTAGAGGTGCAAATTGAGTGAGTTGGTTTAGGCTTGAGTGATCTCAATAGAGGGAGGGTCCAACTACCGCAATTTTATTTTATTAACAACAATAATTTAGAGTTCAACATCACGTGTTAGAGGATATAAACCACTGACTGGGTAATTTATGCTTTAAGCAGTTGAACTATGCTTGGGTTAGTTGTAATTTTTTTTTTCTTTTTATATATTTCTATATCGTCTTTAAGTTTTGTTTGTGTTCTATCATTTTGTCTCTCGATAACTGGGTAACACGTGAATTTGTTGTCAAATAAGGTTCTTGGAATTGTAACAAAGCAAACTAAGGGATGAATCGATAGTTTTTGAAAAGGGGAAAATGGTTAAACAGAAACGGGATAATCATGATCATATTTGTATTGTTTTACATGTGTAATGAGATCCAATTATCTGGCATTAGCAGATGCATTTTGTTCAATGCATGAAACTTTACACTCTTGTCTATGTAGGATTTCGTGACATGCTTGTAATCCCCTTCTCTTTCAATCATCCTTGGCTTTGTCAGAATGAAGTGATCGATCGAGCAAACTGATCAATAGAGTCTTATAGCGTGAGACTGATTGTGCTTCATCAAAGGGATCATTTTCCTGATAAACAGTTCCTGATAAGCTTTAAATGAAACCCAATGTAATTCCAATTTTCTCAAAATTTTCTTTCTTTCATGTATGTAGTACAGAGAAAGTAGTGGAGGCTGGTTTTACACTTCAACTCCTTCCTAAACTTTAAGAAAATTAGTAAGGATGGCTTGTGAAAATAATTGTATAACAGCTCATTGTGGGGCGAGAGATTGAACGTTCAACCATTGATATAATGATCGGTATCATTATTTCCAAAGCTATGCCCTAATGGATCATGATCGGTGTTAATGTGGTAGAACTTGAATATATAGAATGACAATTTTATAGCT

Coding sequence (CDS)

ATGGCGACCCACCTGCTTTCTCCGCCCACCCACTTTCAAACTTCCATGAAACTGGCCCTTCACGCCCCGTTTCTTCTAGCTCCCAGTCGACGGTCACCAGAATGCAGCCACGTAGTGAGTTTAAAACCACATAAAAGATTTCAGAATGCTGGATCAGTGGTCTCTTGTGCTATGAATATGACTGCAGGACAATCAGACGATTCAGGAAGGGTAAATTGGGATAGTTTGAAGAACAGGGTAAAACAGCTTTGGGAAAGTTCACCAGAGCCAGTGAAGTCTTTCCCTTGGAACGAGGCATTGGATAACTTCATCCAGCTTATTGCTGATCTCATCTTGACGGTTATCAAGTACTTGTTTGTACCATTACTCCTCGTTACCTCCCTTAGCGAGATGTCTTACTGTGCTCATGAAAAGAAGCTTCTTATTGTCCCATTTCTATTTATAATTGGCTTCTCCGTTGCTGAGGTCATGAGACAGACAGCTTTAAGTCTATCTCCAATTCTTAAGGATCTAGAAGTACCTTGGCATTTGATCACAATTGCAATATTCTTCACTCTCATTAAACTGCCCGGCCCATCCTATCCATATTGGGGTCGCATATTCTTTCCTCACTTGGCAAATGGAGGTTTGGTCAGAACTATATGGTCTATGTTTCTCTGGTTTAGAAGACCCCGAAAGACATCGATGTTGCTGAAGCATAACGAGAATCACCTGGATACGAAGAAGAATTAA

Protein sequence

MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN

Homology

[Close]

BLAST of Cucsat.G16490.T1 vs. NCBI nr
Match: XP_004137121.2 (uncharacterized protein LOC101221519 [Cucumis sativus] >XP_031744580.1 uncharacterized protein LOC101221519 [Cucumis sativus] >XP_031744581.1 uncharacterized protein LOC101221519 [Cucumis sativus] >KGN43957.1 hypothetical protein Csa_017182 [Cucumis sativus])

HSP 1 Score: 483 bits (1243), Expect = 5.82e-172
Identity = 238/243 (97.94%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNM 60
           MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCA NM
Sbjct: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNM 60

Query: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120
           TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV
Sbjct: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120

Query: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180
           PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFS AEVMRQTALSLSPILKDLEVPWHLITI
Sbjct: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITI 180

Query: 181 AIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDT 240
           AIFFTLIKLPGPSYPYWGRIF PHLANGGLVRT WSMFLWFRRP+KTSMLLKHNENHLDT
Sbjct: 181 AIFFTLIKLPGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDT 240

Query: 241 KKN 243
           KKN
Sbjct: 241 KKN 243

[Close]

BLAST of Cucsat.G16490.T1 vs. NCBI nr
Match: XP_008454906.1 (PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo])

HSP 1 Score: 464 bits (1194), Expect = 1.72e-164
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNM 60
           MATHLLSPPTHFQTS+K+ALHAPFLLAPS RSPECSH+VSLKPHKRFQNA SVVSCAMNM
Sbjct: 1   MATHLLSPPTHFQTSIKMALHAPFLLAPSCRSPECSHIVSLKPHKRFQNARSVVSCAMNM 60

Query: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120
           TAGQSDDSGRVNWDSLKN+VKQLW++SPEPVKSFPWNEALDNFIQLIADLILTVIKYL V
Sbjct: 61  TAGQSDDSGRVNWDSLKNKVKQLWDTSPEPVKSFPWNEALDNFIQLIADLILTVIKYLSV 120

Query: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180
           PLLLVTSLSEMSYCAHEKKLLIVPF FIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI
Sbjct: 121 PLLLVTSLSEMSYCAHEKKLLIVPFPFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180

Query: 181 AIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDT 240
           AIFFTLIKLPGP +PYWGRIF PHLANGGLVRT+WS FLWFRRP+KTSMLLKHNENHLDT
Sbjct: 181 AIFFTLIKLPGPYFPYWGRIFIPHLANGGLVRTLWSFFLWFRRPQKTSMLLKHNENHLDT 240

Query: 241 KKN 243
           KKN
Sbjct: 241 KKN 243

[Close]

BLAST of Cucsat.G16490.T1 vs. NCBI nr
Match: XP_038889064.1 (uncharacterized protein LOC120078811 [Benincasa hispida])

HSP 1 Score: 448 bits (1152), Expect = 4.34e-158
Identity = 216/243 (88.89%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNM 60
           MATHLLSPPTH QTS+K+ALH P LLAPSRR PECSH++SL+PHKRFQNA SVVSCAMNM
Sbjct: 1   MATHLLSPPTHLQTSIKMALHVPLLLAPSRRKPECSHIMSLEPHKRFQNARSVVSCAMNM 60

Query: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120
           TAGQSDDSGRV+WDSLKNRVKQLW++SPEPVK FPWNEALDNFIQLIADLILTVIKYL V
Sbjct: 61  TAGQSDDSGRVSWDSLKNRVKQLWDNSPEPVKCFPWNEALDNFIQLIADLILTVIKYLCV 120

Query: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180
           PLL+VTSLSEMSYCAHEKKLLIVPF FIIGFS+AEVMRQTALSLSPILKDLEVPWHLITI
Sbjct: 121 PLLVVTSLSEMSYCAHEKKLLIVPFPFIIGFSIAEVMRQTALSLSPILKDLEVPWHLITI 180

Query: 181 AIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDT 240
           AIFFTLIKLPGP YPYWGRIF PH  NGGL RT WS+FLWFRRPRKTSMLLKHN+NHLDT
Sbjct: 181 AIFFTLIKLPGPYYPYWGRIFIPHFTNGGLFRTFWSLFLWFRRPRKTSMLLKHNKNHLDT 240

Query: 241 KKN 243
           K+N
Sbjct: 241 KRN 243

[Close]

BLAST of Cucsat.G16490.T1 vs. NCBI nr
Match: XP_022988926.1 (uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharacterized protein LOC111486136 [Cucurbita maxima])

HSP 1 Score: 409 bits (1051), Expect = 8.32e-143
Identity = 199/234 (85.04%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDSG 69
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCAMNM+AGQSDD G
Sbjct: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62

Query: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129
           R +WDSLKNRVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL VPLL+VTSLS
Sbjct: 63  RASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122

Query: 130 EMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189
           EMSYCAHEKKLLIVPF  IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182

Query: 190 PGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN 243
           PGP YPYWGRIF PH ANGGL+RT+WSMF WFRRPR+TSMLLK  ENHLDT KN
Sbjct: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFFWFRRPRRTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cucsat.G16490.T1 vs. NCBI nr
Match: XP_023530129.1 (uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 408 bits (1049), Expect = 1.68e-142
Identity = 200/234 (85.47%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDSG 69
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCAMNM+AGQSDD G
Sbjct: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62

Query: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129
           R +WDSLK RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL VPLL+VTSLS
Sbjct: 63  RASWDSLKVRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122

Query: 130 EMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189
           EMSYCAHEKKLLIVPF  IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182

Query: 190 PGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN 243
           PGP YPYWGRIF PH ANGGL+RT+WSMFLWFRRPRKTSMLLK  ENHLDT KN
Sbjct: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL
Match: A0A0A0K6P0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1)

HSP 1 Score: 483 bits (1243), Expect = 2.82e-172
Identity = 238/243 (97.94%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNM 60
           MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCA NM
Sbjct: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCATNM 60

Query: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120
           TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV
Sbjct: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120

Query: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180
           PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFS AEVMRQTALSLSPILKDLEVPWHLITI
Sbjct: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSAAEVMRQTALSLSPILKDLEVPWHLITI 180

Query: 181 AIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDT 240
           AIFFTLIKLPGPSYPYWGRIF PHLANGGLVRT WSMFLWFRRP+KTSMLLKHNENHLDT
Sbjct: 181 AIFFTLIKLPGPSYPYWGRIFIPHLANGGLVRTTWSMFLWFRRPQKTSMLLKHNENHLDT 240

Query: 241 KKN 243
           KKN
Sbjct: 241 KKN 243

[Close]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL
Match: A0A1S3C0E1 (uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=4 SV=1)

HSP 1 Score: 464 bits (1194), Expect = 8.33e-165
Identity = 227/243 (93.42%), Postives = 236/243 (97.12%), Query Frame = 0


Query: 1   MATHLLSPPTHFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNM 60
           MATHLLSPPTHFQTS+K+ALHAPFLLAPS RSPECSH+VSLKPHKRFQNA SVVSCAMNM
Sbjct: 1   MATHLLSPPTHFQTSIKMALHAPFLLAPSCRSPECSHIVSLKPHKRFQNARSVVSCAMNM 60

Query: 61  TAGQSDDSGRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFV 120
           TAGQSDDSGRVNWDSLKN+VKQLW++SPEPVKSFPWNEALDNFIQLIADLILTVIKYL V
Sbjct: 61  TAGQSDDSGRVNWDSLKNKVKQLWDTSPEPVKSFPWNEALDNFIQLIADLILTVIKYLSV 120

Query: 121 PLLLVTSLSEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180
           PLLLVTSLSEMSYCAHEKKLLIVPF FIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI
Sbjct: 121 PLLLVTSLSEMSYCAHEKKLLIVPFPFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITI 180

Query: 181 AIFFTLIKLPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDT 240
           AIFFTLIKLPGP +PYWGRIF PHLANGGLVRT+WS FLWFRRP+KTSMLLKHNENHLDT
Sbjct: 181 AIFFTLIKLPGPYFPYWGRIFIPHLANGGLVRTLWSFFLWFRRPQKTSMLLKHNENHLDT 240

Query: 241 KKN 243
           KKN
Sbjct: 241 KKN 243

[Close]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL
Match: A0A6J1JED8 (uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136 PE=4 SV=1)

HSP 1 Score: 409 bits (1051), Expect = 4.03e-143
Identity = 199/234 (85.04%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDSG 69
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCAMNM+AGQSDD G
Sbjct: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62

Query: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129
           R +WDSLKNRVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL VPLL+VTSLS
Sbjct: 63  RASWDSLKNRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSVPLLVVTSLS 122

Query: 130 EMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189
           EMSYCAHEKKLLIVPF  IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTLIKL
Sbjct: 123 EMSYCAHEKKLLIVPFPLIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLIKL 182

Query: 190 PGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN 243
           PGP YPYWGRIF PH ANGGL+RT+WSMF WFRRPR+TSMLLK  ENHLDT KN
Sbjct: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFFWFRRPRRTSMLLKQKENHLDTPKN 236

[Close]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL
Match: A0A6J1EIP9 (uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC111434507 PE=4 SV=1)

HSP 1 Score: 406 bits (1044), Expect = 4.70e-142
Identity = 197/234 (84.19%), Postives = 213/234 (91.03%), Query Frame = 0


Query: 10  THFQTSMKLALHAPFLLAPSRRSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDSG 69
           TH Q S K+ALHAP LLAP  RSPECSHVVSLKPHKR QNA S+VSCAMNM+AGQSDD G
Sbjct: 3   THLQISAKMALHAPVLLAPRLRSPECSHVVSLKPHKRIQNARSMVSCAMNMSAGQSDDPG 62

Query: 70  RVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSLS 129
           R +WDSLK+RVK+LW++SPEPVK FPWNEAL+NFIQLIADLIL+VIKYL +PLL VTSLS
Sbjct: 63  RASWDSLKDRVKKLWDNSPEPVKCFPWNEALNNFIQLIADLILSVIKYLSIPLLAVTSLS 122

Query: 130 EMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIKL 189
           EMSYCAHEKKLLIVPF  IIGFSVAEVMRQTALSLSPILKDLEVPWHLITIA+FFTL+KL
Sbjct: 123 EMSYCAHEKKLLIVPFPVIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIALFFTLVKL 182

Query: 190 PGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN 243
           PGP YPYWGRIF PH ANGGL+RT+WSMFLWFRRPRKTS+LLK  ENHLDT KN
Sbjct: 183 PGPYYPYWGRIFLPHFANGGLLRTVWSMFLWFRRPRKTSILLKQKENHLDTPKN 236

[Close]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL
Match: A0A6J1C7B2 (uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008035 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 5.19e-137
Identity = 192/235 (81.70%), Postives = 207/235 (88.09%), Query Frame = 0


Query: 10  THFQTSMKLALHAPFLLAPSR-RSPECSHVVSLKPHKRFQNAGSVVSCAMNMTAGQSDDS 69
           TH Q S K+ALH+P L AP   RSPEC+HVVS KPHKRFQNA S+VSCAMNMTAGQSDD 
Sbjct: 3   THLQISTKMALHSPVLPAPRHHRSPECNHVVSFKPHKRFQNARSMVSCAMNMTAGQSDDP 62

Query: 70  GRVNWDSLKNRVKQLWESSPEPVKSFPWNEALDNFIQLIADLILTVIKYLFVPLLLVTSL 129
           G+V+WDSLK+RVK+LW+SSPEPVK FPWNEALDNFIQLIADL+L VIKYL VPLL VTSL
Sbjct: 63  GKVSWDSLKDRVKKLWDSSPEPVKCFPWNEALDNFIQLIADLVLAVIKYLCVPLLAVTSL 122

Query: 130 SEMSYCAHEKKLLIVPFLFIIGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIK 189
           SEMSYCAHEKKL +VPF  I+GFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIK
Sbjct: 123 SEMSYCAHEKKLFVVPFPLIVGFSVAEVMRQTALSLSPILKDLEVPWHLITIAIFFTLIK 182

Query: 190 LPGPSYPYWGRIFFPHLANGGLVRTIWSMFLWFRRPRKTSMLLKHNENHLDTKKN 243
           LPGP YPYWGRIF PH ANGGL+RT+WS FLWFRRPRK S  LKHN  HL+T KN
Sbjct: 183 LPGPYYPYWGRIFIPHFANGGLLRTLWSSFLWFRRPRKPSTQLKHNSTHLNTNKN 237

The following BLAST results are available for this feature:

BLAST of Cucsat.G16490.T1 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G16490.T1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137121.2	5.82e-172	97.94	uncharacterized protein LOC101221519 [Cucumis sativus] >XP_031744580.1 uncharact...	[more]
XP_008454906.1	1.72e-164	93.42	PREDICTED: uncharacterized protein LOC103495211 [Cucumis melo]	[more]
XP_038889064.1	4.34e-158	88.89	uncharacterized protein LOC120078811 [Benincasa hispida]	[more]
XP_022988926.1	8.32e-143	85.04	uncharacterized protein LOC111486136 [Cucurbita maxima] >XP_022988927.1 uncharac...	[more]
XP_023530129.1	1.68e-142	85.47	uncharacterized protein LOC111792778 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G16490.T1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6P0	2.82e-172	97.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G074900 PE=4 SV=1	[more]
A0A1S3C0E1	8.33e-165	93.42	uncharacterized protein LOC103495211 OS=Cucumis melo OX=3656 GN=LOC103495211 PE=...	[more]
A0A6J1JED8	4.03e-143	85.04	uncharacterized protein LOC111486136 OS=Cucurbita maxima OX=3661 GN=LOC111486136...	[more]
A0A6J1EIP9	4.70e-142	84.19	uncharacterized protein LOC111434507 OS=Cucurbita moschata OX=3662 GN=LOC1114345...	[more]
A0A6J1C7B2	5.19e-137	81.70	uncharacterized protein LOC111008035 OS=Momordica charantia OX=3673 GN=LOC111008...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36000	DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED	coord: 3..229
None	No IPR available	PANTHER	PTHR36000:SF2	DEFECTIVE 1273 PROTEIN, PUTATIVE-RELATED	coord: 3..229

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G16490	Cucsat.G16490	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16490.T1.E1	Cucsat.G16490.T1.E1	exon
Cucsat.G16490.T1.E2	Cucsat.G16490.T1.E2	exon
Cucsat.G16490.T1.E3	Cucsat.G16490.T1.E3	exon
Cucsat.G16490.T1.E4	Cucsat.G16490.T1.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16490.T1.C3	Cucsat.G16490.T1.C3	CDS
Cucsat.G16490.T1.C2	Cucsat.G16490.T1.C2	CDS
Cucsat.G16490.T1.C1	Cucsat.G16490.T1.C1	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G16490.T1	Cucsat.G16490.T1-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071472	cellular response to salt stress
biological_process	GO:0009658	chloroplast organization
cellular_component	GO:0016021	integral component of membrane