Cucsat.G16359.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAGAAAGGAGAAGAGGTTTGAGGCTGAGGCGCGAAGCAAAAGGAAGATATAAAAAGAAGTTGGGCCCTTTATTTTCGGAGAAGGGAATCCACCACCTCCATCTCAACTCCCTCTGCTCTCACCAATGGCTGACGATAAGAAACCCAGCGTCTCCCCCGTTTGGCCCACCGTCAAGCCCTTTGTTAATGGCGGTGCCTCCGGTATGCTCGCCACCTGCGTCATTCAACCCATTGATATGGTCAAGGTACTCTACTTCCATCAAATGCCAATGCCCTTATCTTCAATTCCTGCTGGCTGCTTCTAATCTTTATCTACTGCTCCCCTTTCTCTTAGGTCAGAATTCAACTTGGTCAAGGATCCGCTGGCCATGTCACAAGAACCATGCTTAAGGAGGAGGGTTTTGGTGCCTTTTACAAGGTTTCCATTTTTCATTCTGCTCAGCAAACAAATTATTTCCTTCCTTGTTTTTATGCTACTACCCCTCCCCTGTTTCCTTTCTTTCCTCATACCGAATTGTTGTATCTTTTGTTGAACTACGATGGTATTGCATTACTGTCTCCGATCATTGTGTTCTGCATATCTTTTCGATGTGTTCTACTGAATTATTTATTTGTTGCCACCATTGAGTGACTGATGATGTATTAACTGAGGAGCCACTTGAAAATTAAGTGGTTGTTTGACACATTTTCAGTATCTTGTAAATTAGGATATAGGCAAAGTTCATTTTCTAATGGATGAAGATTTGCTTGGATTTTTTTCCTTTCAAAATTTTCCGGTTCTCTAGTGCTCGACACTTAGTTTTGTGGATTATCTTTGTCTAAACTTCATTTTCCAACCAGGGGTTATCTGCTGGATTGCTCAGACAAGCTACATATACTACAGCAAGACTGGGATCTTTTAAGTGAGCGTGTTACAAATCTAGAATTGAACACCTTTGGATCATATTCATGAGGCTATGGTTTTACTTCCAACATTTGTTCTTCCTCATGTCTATGTAGTTTTTTTTAGAACTTTAAGAAAATTTGCATTTCTTAGTCCCTACATTTTAGGAATGATCAATTGGTTCCTATAGTTTGAAACATGACAATCTAGTTACTGTAGGATTAAATGTGGTTCTCAATTGCCCTCAAATTATTTTATCCAGTGGGTCCCATGAAAATGTCACATGATCTTATAGTTTATGTTAGTTAAGTTCGTAGGGGCCAAGTCATTTGTATTTGAGACTCATCATTAAGTCAAAACCACACAGATATAATGACCATCTAAGGCTACTGGAGTTAAATCGTCACATTCTGAACTACAAGGACCATGTAGAATCATTTCCTGGACTGTAGTGGCTAAATGTTTTTTTTTTTTTTGGCTTGTATATTTGGTTGATCAAACCTCTGTTCTTCTCCATTTCCCTTCTAGGATATTGACAAACAAAGCAATTGAAGCCAACGAGGGAAAGCCCCTTCCACTATATCAGAAGGCCTTATGTGGGCTCACAGCCGGTGCTATTGGAGCATCTGTTGGTAGTCCAGCGGACTTAGCTCTTATTCGCATGCAAGCAGATGCAACTTTACCTGCTGCCCAGCGCCGAAATTATAAAAATGCCTTCCATGCACTTTATCGCATTCTTGCAGATGAGGGGGTTTTAGCTCTTTGGAAAGGTGCAGGCCCCACTATTGTAAGAGCAATGGGATTGAACATGGGAATGCTTGCTTCATATGATCAAAGTGTTGAGTTCTTCAAGGATAACCTTGGTTTTGGCGAAGCTGCTACGGTGTTGGGTAAGATTGTTTTTGATACTGTAAGTTGATGCCAATTGTAATGCCCCATGCGGTGTTGCACTAATTGCTAGGGTATTGCAATTTCATCGGCTCATTACTATCTCTTTCTTAGTAGTCATCTAGTCATTTCATATTCACGTGTGTATAATTTGACACTGTTGAAAATAATTAGTTTAACTAACTTAATCATAATCATTGTTGGTCAAGATTAGCTGCCATCTTTTCATTGAGGTTTCTATGTTATAGATAATTTTGACTTTTGAGAGAGGTCAAACTTTAAGTTTGATTAATAAACTCGCCCTTGGAGTTGTACTTTATTTCAATGAGAGGATCTAAATGTTTTTTTTCGTATTCCTGTATCGATTCAGTTCGTAGATACTAGATTTATGACTAGGTAAGCTTGTTATATTTGTTATCCACAGATATTCTTTTGCTGTTCTTACCGTAGAGAGTTGAATTTACCACACTTTTCTTCAGTATGAGCAGCTTAGCTTATATTGCTTAAGAGGCAAGTGGCCACTGAACGTTGAGTGGAATTGCTCAAAGTTTTCACTTATCGTTGGATTGTTATAAGTTCAATGAAAGTTCTTCCTTTGTCTTTCTCCTTCGTTCTTCTGTCTGTGTGTATTAAAATGGTGGTCTTTGGAAATGTTTCTATTGTGAGTCGCCTTCTCTCTGATTGTGATTCTTGCTAAATTTCTTTTATGATTTATTATTTATTGTTCTTCTTAGGTGCCAGTATGGTATCAGGATTCTTTGCTTCAGCGTGTAGTCTACCATTTGATTATGTGAAAACTCAAATTCAGAAAATGCAACCCGATGCTGAGGGAAAATTTCCCCACTCTGGCTCTTTGGATTGTGCCATGAAAACTCTCAAGGCAGGAGGGCCGTTAAAATTCTACACTGGATTTCCAGTGTATTGCGTGAGAATTGCCCCCCATGTCATGGTATATCTCTTTTCTCTGTCTGTCTGTCTGTGCACACACTACTTGGGTTATCATGGTGCCTATCGCTGTTGTAGCTGGGTATCTATCAATGGCGATACCACATTTAAGATAATTCACTGAATCAAATGTTGGACTTGATGATGCAGATGACTTGGATTTTCCTAAACCAGATTCAAAAGGTAGAAAAATCATACGGGTTATGAAGGACTGACCAAGATGATGGAGATCCTTTCCAAGTTTATTTCAGGCTTCAACAATTATGATTTTTTTTTCCTTGTGGTTCTTTGACCATGTTGTAATCTAACTTTCTTTGAATACGGAATTCCACGCTTGAGTTTAAAAGCGTTTTAATTATCTTTCTGTGCAAACATGGTTCAAAGGTGCAAGATTGATAGATAGAAAGAGGGTATCAAATTGCTTCTGAAATTTGAATGTACCAGATTCTCACTGGGAAGAAACATAGAATACATACATAATAAGCCTTGTAAAGAGTTCTTTAAAGGTTAAACTCTGTCCCAACCACAACATTCTCGTGGAGGCATTTGAATGATTAGAAATTAACGTATGGAGGATGCTCCTGATCTGCTAATGTAAATAGTTCATGTTTGCTTTGGCGATTTGACAATAAAATATTGGTAAGGTGTTTATTTTCAGGCTAAGACAATCACATCAGCATTTATAAGAAAGAATGTAGGTTCATTAGAGGAAATAATGAAATGGCAGACAATATACAATCAGAAAAGCAATGCGAAGAAGTTTAAAGGAAGAAGGAAAAAAAAAGAGCAGAAAGGGAAGCAAGGAAAGTAGGGTAAAAGAGAGGAGCATCCGAGGCAGGAGCAGGAGCAGGAGCAGCAGGCTGGGCACTGGTGGCAGCGAAGGCCAGCAGCAGCAGCACCAGGAACAGCTTCAACTTGATTGCCTCCATTGCTGAATGATACAGCTCTTGTCTTGTTGAATCCAATTGAATTGAAGAAGATGAAGAGTTGTTGGGGGCGTGAATTGGTAAGGAAGAAGAGACTATTTATGTATGAAAAATGCATTCAGGAACTCGAGAGGCTGAGACAGAGACAGGAACACAACAGGGTGGTTTTGGTTGGTTGCTTTTATCTTACCATACGCTAATTGATACAGCTAACTCTCAGTGGCTGTGGGTCCCCGTGTTTTGCTGTCTTTCTGTATTTTTCTCTCTCTCTTTTTTCTTTTCTTTTTTCTATGATTTTCTGTTTGA ATGGCTGACGATAAGAAACCCAGCGTCTCCCCCGTTTGGCCCACCGTCAAGCCCTTTGTTAATGGCGGTGCCTCCGGTATGCTCGCCACCTGCGTCATTCAACCCATTGATATGGTCAAGGTCAGAATTCAACTTGGTCAAGGATCCGCTGGCCATGTCACAAGAACCATGCTTAAGGAGGAGGGTTTTGGTGCCTTTTACAAGGGGTTATCTGCTGGATTGCTCAGACAAGCTACATATACTACAGCAAGACTGGGATCTTTTAAGATATTGACAAACAAAGCAATTGAAGCCAACGAGGGAAAGCCCCTTCCACTATATCAGAAGGCCTTATGTGGGCTCACAGCCGGTGCTATTGGAGCATCTGTTGGTAGTCCAGCGGACTTAGCTCTTATTCGCATGCAAGCAGATGCAACTTTACCTGCTGCCCAGCGCCGAAATTATAAAAATGCCTTCCATGCACTTTATCGCATTCTTGCAGATGAGGGGGTTTTAGCTCTTTGGAAAGGTGCAGGCCCCACTATTGTAAGAGCAATGGGATTGAACATGGGAATGCTTGCTTCATATGATCAAAGTGTTGAGTTCTTCAAGGATAACCTTGGTTTTGGCGAAGCTGCTACGGTGTTGGGTGCCAGTATGGTATCAGGATTCTTTGCTTCAGCGTGTAGTCTACCATTTGATTATGTGAAAACTCAAATTCAGAAAATGCAACCCGATGCTGAGGGAAAATTTCCCCACTCTGGCTCTTTGGATTGTGCCATGAAAACTCTCAAGGCAGGAGGGCCGTTAAAATTCTACACTGGATTTCCAGTGTATTGCGTGAGAATTGCCCCCCATGTCATGATGACTTGGATTTTCCTAAACCAGATTCAAAAGGTAGAAAAATCATACGGGTTATGA MADDKKPSVSPVWPTVKPFVNGGASGMLATCVIQPIDMVKVRIQLGQGSAGHVTRTMLKEEGFGAFYKGLSAGLLRQATYTTARLGSFKILTNKAIEANEGKPLPLYQKALCGLTAGAIGASVGSPADLALIRMQADATLPAAQRRNYKNAFHALYRILADEGVLALWKGAGPTIVRAMGLNMGMLASYDQSVEFFKDNLGFGEAATVLGASMVSGFFASACSLPFDYVKTQIQKMQPDAEGKFPHSGSLDCAMKTLKAGGPLKFYTGFPVYCVRIAPHVMMTWIFLNQIQKVEKSYGL Homology
BLAST of Cucsat.G16359.T1 vs. ExPASy Swiss-Prot
Match: Q9C5M0 (Mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Arabidopsis thaliana OX=3702 GN=DTC PE=1 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 3.5e-142 Identity = 248/299 (82.94%), Postives = 270/299 (90.30%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy Swiss-Prot
Match: P0C582 (Putative mitochondrial 2-oxoglutarate/malate carrier protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mic-33 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.4e-66 Identity = 138/284 (48.59%), Postives = 177/284 (62.32%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy Swiss-Prot
Match: Q9CR62 (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Mus musculus OX=10090 GN=Slc25a11 PE=1 SV=3) HSP 1 Score: 234.6 bits (597), Expect = 1.5e-60 Identity = 140/301 (46.51%), Postives = 185/301 (61.46%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy Swiss-Prot
Match: Q02978 (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Homo sapiens OX=9606 GN=SLC25A11 PE=1 SV=3) HSP 1 Score: 233.8 bits (595), Expect = 2.5e-60 Identity = 139/301 (46.18%), Postives = 184/301 (61.13%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy Swiss-Prot
Match: P22292 (Mitochondrial 2-oxoglutarate/malate carrier protein OS=Bos taurus OX=9913 GN=SLC25A11 PE=1 SV=3) HSP 1 Score: 231.9 bits (590), Expect = 9.6e-60 Identity = 137/301 (45.51%), Postives = 186/301 (61.79%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. NCBI nr
Match: XP_004149644.1 (mitochondrial dicarboxylate/tricarboxylate transporter DTC isoform X1 [Cucumis sativus] >KGN54024.1 hypothetical protein Csa_021675 [Cucumis sativus]) HSP 1 Score: 600 bits (1547), Expect = 2.00e-216 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. NCBI nr
Match: XP_008449887.1 (PREDICTED: mitochondrial dicarboxylate/tricarboxylate transporter DTC [Cucumis melo]) HSP 1 Score: 583 bits (1504), Expect = 7.20e-210 Identity = 291/299 (97.32%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. NCBI nr
Match: XP_038902539.1 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Benincasa hispida]) HSP 1 Score: 575 bits (1483), Expect = 1.14e-206 Identity = 288/299 (96.32%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. NCBI nr
Match: XP_022153731.1 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Momordica charantia]) HSP 1 Score: 573 bits (1477), Expect = 9.39e-206 Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. NCBI nr
Match: XP_022958632.1 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Cucurbita moschata] >XP_022996246.1 mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Cucurbita maxima] >XP_023533509.1 mitochondrial dicarboxylate/tricarboxylate transporter DTC-like [Cucurbita pepo subsp. pepo] >KAG6605835.1 Mitochondrial dicarboxylate/tricarboxylate transporter DTC, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 573 bits (1476), Expect = 1.33e-205 Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy TrEMBL
Match: A0A0A0KZ03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G268080 PE=3 SV=1) HSP 1 Score: 600 bits (1547), Expect = 9.70e-217 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy TrEMBL
Match: A0A1S3BMG5 (mitochondrial dicarboxylate/tricarboxylate transporter DTC OS=Cucumis melo OX=3656 GN=LOC103491631 PE=3 SV=1) HSP 1 Score: 583 bits (1504), Expect = 3.48e-210 Identity = 291/299 (97.32%), Postives = 295/299 (98.66%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy TrEMBL
Match: A0A6J1DLK2 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like OS=Momordica charantia OX=3673 GN=LOC111021180 PE=3 SV=1) HSP 1 Score: 573 bits (1477), Expect = 4.55e-206 Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy TrEMBL
Match: A0A6J1K468 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like OS=Cucurbita maxima OX=3661 GN=LOC111491528 PE=3 SV=1) HSP 1 Score: 573 bits (1476), Expect = 6.46e-206 Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0
BLAST of Cucsat.G16359.T1 vs. ExPASy TrEMBL
Match: A0A6J1H2C8 (mitochondrial dicarboxylate/tricarboxylate transporter DTC-like OS=Cucurbita moschata OX=3662 GN=LOC111459799 PE=3 SV=1) HSP 1 Score: 573 bits (1476), Expect = 6.46e-206 Identity = 285/299 (95.32%), Postives = 290/299 (96.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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