Cucsat.G1612.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAACTTAAGAACTTATTCTAATTCTGGTCATCAAACTTGAGGAAACAATGCTGAGATTTTCGATTTCGCTATCCGCCATGGAAGCTTCAGCTTGGAGAGGATTAGCCTTCACCGTGTTTCTTCTCAACTTCGTTCTAGTTTGTCAGCTTCTTCTTCTTCAACCTTTGGTTTCGGCTTCAGGTTCGTTAATGCTACTCTCTGATCTATCTTTCTGATCTTCGCTGGAAATATTTAACTAGACGGAGTTTCTATTATTGCACTTTGGTTTGTTACCTTCGATTAGATTCCTAGATTAAGTTCTTGAATGTGCGATATTTCTTCTTGTTCTTTATTTGTTCACTGTGTAATTAATTTACGATGTTGATGAGTCTGATTTCATAGTTTGAAGCTATTACGATGACTGATGCAATTTTAATTTGGAAATGTTAATTTCTCTTATAGTTCCTCCGGCCTCCGTATTTTCTGTTCCCACATTTGTTGGTCCGAACAGTTCTGGTATTATTGATTTCTCTAAAATAATAAAGATTGGCCGCGAAATTTAAATATCGCATTCCATCTATTAATGGTACATATTTTGATTTGGAAATGGAAGGAGCCACTCTGTTTAAAGTTATTTTCAGTACCTTATTGTAAGGTCGTAGGTTTCGATGTTGTCTGATTTAAATTCTTGAGGTCATTGTCTCAGATTTAATAAGTTTCCTATGGTAGAACACAAATCGCCTAAGATTAATGGTAAACAACTCGGTCACCATACTTTAGAAAGAAGCCATTTCTTTGTTTTTCAAATTAGTGCTATGAGGAGGCTTTGAAACCTGCCTATTATATCGTCAAATGATGCCCCCGTAGTATAGAATCTATAGATCTTTGTGAGCTTTCTAGTTGTATTGTTTGATGTGTGTAAAGTCAGTAGCTCTGTCTTATCTCTACTGATCTCTCGACTTTTCTCTCATTTGATGATCTAAATGCCTTTATTTCCATTATATGGTGGGAATAATAATCATAATCAGGGAACTCAGCCTTAGAAATATTATAAGGAAGGGGCTTTCTTTGGTATTAAGTATTTACTATGCGTGATCACGAAACTCATCTTTAACCTAGGCACATAAAATTTCTAAGGAAACATGAGATTGCTCCTCGGGATGTAGCACATTTGGTTTCTCCATTATCTGCCTGATGCAAGGTTTCTTCATCTGGGGTTTGCATTTGTGGTTTTCAATTTATATTGCCAGTTGTATTTTGTAATTGATTGACTTATATCTTCAGATGGATCACTGGGTAACTCTGCCGAATTGTTTGAGAAAGTTTCACAAAATGTAAAGGTGAAGCGTTATAGTGAGGCACTCGATGATCTTAATGCTGCTATTGAGGCAGACCCAAAACTTTCAGAAGCATACTTCCATCGTGGTTCAATTCTTCGCAAGTTATGCAGGTTTTCTGCCTCTCTTGTTCTTGAAAATCATTGCAAATTATGACATCAAATCAGAAAATATGTGTAATTTTGGCATTGCGAATTAAAATCTTTCAGAATTTTGTGGATTGCAAATTAGAAACTTGGAATTCTCTGAAATGGAAATCTGCTTTGATTTGTAATATACTTCGTGCCTGTTTATGGCTGAGGTGTAAAACTGCCTCCATTACTTTTTACCATCGCATCTCCCTATGGTTACACGTCTTTGTTGTCGTAAAAACTTCCTTTCCAGATATGCTTTGATCTATTTTTCATTATGAGGAGCATATGTTGAGAATGGATATATTACAAATGAGAATAGGAAAAATTATCGGCGAAAGTAATGAGAATGGAAAATATTTCAGCTTCTCATAATTATAGCAGAAAAGAAATTTTGTATTTATTTGTGCCAAAGAGGGTAGGAGGGATCATCTCGATGGAAAATAAAAATAAACAAAAAGGGCATTTTCCCATAGAAGGTTGGACATACTTTTGAGATGAGAACATTGTAAAGGAAATTTTAAGCCATTTTGGCATGTAGAAAACCGTACTCCCGCTCTCTACCTTCCATTCTGATTGGCCAATTATATGATTCAGGAACTTTTTGGCTGATGTAGATATAATGAATCTGAGGAGAACTACAAGAAGTATCTTGAGTTAAAACCTGGAAATCCAGCGGGTGAAAAGGAGCTTTCTCAATTGCTTCAGGCTCAGAGTGCTTTAGAAACGGCTCTTAAGCATTTTGATACAGGGGATCACACAAAAGCATTGGAATTTCTGGATAAAGTTGTACTTGTTTTCTCTCCTGCATGCTCTGAGGTGATACCATCGTTATCCAATTAGACTTTTCCGTACTTTTAAACATCCTGAAATTGGTACTTATCTTTCATATGGATTTGATGTAGGCCAAACTCCTGAAGGTAAAACTGTTGTTGGCAACTAGGGACTATTCTGCTGCTATCCTTCATACTGGATATATTCTTAAAGAAGATGAAAACAATCTGGATGCATTACTACTTCGTGGGCGTGCCTACTACTATTTGGCAGATCATGATGTTGCCTCGAGGTTGATTTGACCGTACTTGTTGAAAGCATTACTTAATAAAAATGAACATGTTTTAATACGTGAACAACTTTCCCAGGCATTTTCAGAAGGGTCTTCGTCTAGATCCAGAGCATGTTGAACTGAAGAAAGCATATTTTGGGTTGAAGAATCTTCTCAAGAAAACCAAGAGTGTAAGCCCAAACTACATAAAAAGGATCTATTAATTTCCATTTTCTTGGATTTTCTTCTTTGATTGGGATAGGGAAGCTCACGGCTATAGAAATCTCTTTAGACCTTTTTTTCAGGTCTGGTAAAAGTTTTTGAGTTATTGAAATTGATAATGTTTTTCACTTTAGTTTCTATACTTTGTTGACAGGCAGAAGATAATGTCAACAAGGGTAAGCTGCGACTAGCAGTGGAGGAATATAATGCAGCCCTTGCATTGGACCCCAAACATCTTGCACACAATGTACATCTTCATCTTGGTTTATGCAAGGTACTAGTCAAGCTTGGTCGTGGAAAGGATGCTGTTACGAGCTGCAATGAAGCACTGAACATTGATGGAGACCTAATTGAAGCTTTGGTCCAGGTTCGCCTTTTCTTCTTGGCCCTCATCTCTCTGGCTCTCTTCCTTTAATATGGACTTTGTTTTGCTGAAGTGGATGTTGCAATTTTCTATATTAGTTTGTCTATAGAAAGCTCCACTGTTTCACCTTCGCAATGCTCGACCTTTTATGTTGGGCTATGATTATCATAGTTTTCATTTGCTTCCAAGACCTTTATTATTGTTCACTGTTGGAAACTCAAGCAGCAGCAGCTATCCTATCTCTCATCCTAACTTCATTTTCAATTTTACGTTAATGTTGAAGTTTGTTAGTGCATGTGTATAACAGTATAAAATCTCAAGTTCTTTAATTCTCTGAACTTTCTTCTCAGAGAGGTGAAGCAAAGCTTTTAACAGAGGACTGGGAGGGTGCTGTTGAAGATCTTAAGTCAGCGGCTCAAAGTTCACCGCAGGTTAGCTATCATTCCATTTATCCTTCAACTCTCGAAAACCTATTATTCAGTTGTGGAAGTGGTAGACAAAACTTTTTGTAAAATTTTATTCCCTTTAACGCATCAACTAATCTTATTAGAGACTTTGTTTATTGATGTTGATATTAGGATACCACCTAACAAGGAGACACTCAAGAACACTGAATTATGGAATTATATTGACAACATGCTATAAAATCATAAGAAAAGTAATGAGGTAACCCTAGCCTTTCAGGCTAGACTCCCAAATTTCCAACATTGAAAATCCCACGACATACTTTCCCTTACTCTCAACCCAAAACCTTTATTTATAACTAAAAAGCCTTAGCAAACTTACTAGCATATTTACTAGTATTCCCCTCCTAATAACCATACCAATATTCTTTTAATATGTCCATAACTAGGAGTGTTACAGGTGATCTATGTATCAAAGAAACAAAAACAGCTTATTTCTTATTATTTTTTCTCTAAAAGAACAACTTACAGTTTTTGTTAGATTTAAAAATGGGATACGTTTGTTGGGATAACTTTCATACCAGTTCATATTAATAATAAAAATCATAGTAAGACGAAATAAAACCGGGTTGAGTTTGATTCATTGCAGGTTTTGCACTGTGGGTTATCAGTAATTTGATCAATTATGTTTGCAGGATATGAATATTAGGGAGGCACTGATGAGGGCTGAAAAGGCTTTAAAAATGAGCAAACGAAAGGACTGGTACAAAATTTTAGGAGTCTCAAAGACTGCTTCTGTCGCTGAGATTAAACGTGCCTATAAAAAGCTTGCTTTGCAATGGCACCCTGACAAAAATGTGGAAAATAGAGAAGAAGCAGAAGCCAAGTTCCAAGATATTGCTGCTGCATATGAGGTCAAAATATCTATATGTTCTCATCCATTAAATAATACCAGAGTTCCAATTCTATATGCTGAAATTGATTACATGATGAATCCTTCGCCTGTCCAAAATTGGTCTTTAGTACTGTTAAAAACGTGATACTAATGCAAGATGGGTAAACATGTAGCTGAGTGGCACAAGTTATGTCTTGCAGGTCCTGGGCAATGAAGAAAAGCGTACAAGATTTGATAGAGGGGAAGACATTGAAGACATGGGCATGGGTGGCGGCGGTGGTGGCGGTTTCAATCCTTTTGGTGGTGGAGGACAGCAATTTACATTTACCTTCGACGGTGGGTTTCCTGGTGGTGGTGGTTTTGGTGGAGGTGGGTTTCCTGGTGGTGGCGGCTTTCCTGGTGGTGGTGGGTTTGAGTTCCATTTCTAATTTCAGCATAAAAGCACCAGTTCCTCTTTTTTCTGATATTTTTTTCACTGACTAGAAAACAATGATTATAAAGAGGAGGGGAAGGGGGATCAAAATATTTATTTGCTGAAAAGTAGAAATACTTTAGGTTAGAATTACTGATAGAGGCTTTTTAGTTCAGAAAAATGTTAATTGAGCAAGATTTTGTTAAAACATATTGAGAGGAAATGCATGAGTTGTAATTGTAATACGTTGGATGTATAACTATAAGCCTGCATTTATACTATTGCTTAGATTTTTTTTGCCACTTAACAAGGTATGTAATGTAAAGAGGTAGCTTTGGTAAGTGGGTTTAGTTTAGTGGTATTGATATGGTTTTTCCA ATGAATATTAGGGAGGCACTGATGAGGGCTGAAAAGGCTTTAAAAATGAGCAAACGAAAGGACTGGTACAAAATTTTAGGAGTCTCAAAGACTGCTTCTGTCGCTGAGATTAAACGTGCCTATAAAAAGCTTGCTTTGCAATGGCACCCTGACAAAAATGTGGAAAATAGAGAAGAAGCAGAAGCCAAGTTCCAAGATATTGCTGCTGCATATGAGGTCCTGGGCAATGAAGAAAAGCGTACAAGATTTGATAGAGGGGAAGACATTGAAGACATGGGCATGGGTGGCGGCGGTGGTGGCGGTTTCAATCCTTTTGGTGGTGGAGGACAGCAATTTACATTTACCTTCGACGGTGGGTTTCCTGGTGGTGGTGGTTTTGGTGGAGGTGGGTTTCCTGGTGGTGGCGGCTTTCCTGGTGGTGGTGGGTTTGAGTTCCATTTCTAA MNIREALMRAEKALKMSKRKDWYKILGVSKTASVAEIKRAYKKLALQWHPDKNVENREEAEAKFQDIAAAYEVLGNEEKRTRFDRGEDIEDMGMGGGGGGGFNPFGGGGQQFTFTFDGGFPGGGGFGGGGFPGGGGFPGGGGFEFHF Homology
BLAST of Cucsat.G1612.T6 vs. ExPASy Swiss-Prot
Match: A0A0P0VG31 (DnaJ protein P58IPK homolog A OS=Oryza sativa subsp. japonica OX=39947 GN=P58A PE=1 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 8.6e-54 Identity = 113/147 (76.87%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy Swiss-Prot
Match: Q5JNB5 (DnaJ protein P58IPK homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=P58B PE=1 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 3.6e-52 Identity = 112/147 (76.19%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy Swiss-Prot
Match: Q9LYW9 (DnaJ protein P58IPK homolog OS=Arabidopsis thaliana OX=3702 GN=P58IPK PE=1 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 2.7e-47 Identity = 104/135 (77.04%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy Swiss-Prot
Match: Q9HGM9 (DnaJ homolog subfamily C member 7 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC543.02c PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 9.6e-21 Identity = 78/154 (50.65%), Postives = 95/154 (61.69%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy Swiss-Prot
Match: Q54M21 (DnaJ homolog subfamily C member 3 homolog OS=Dictyostelium discoideum OX=44689 GN=dnajc3 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.6e-20 Identity = 74/147 (50.34%), Postives = 96/147 (65.31%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. NCBI nr
Match: XP_004143240.1 (dnaJ protein P58IPK homolog [Cucumis sativus] >KGN48138.1 hypothetical protein Csa_003500 [Cucumis sativus]) HSP 1 Score: 273 bits (697), Expect = 4.24e-87 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. NCBI nr
Match: XP_008449263.1 (PREDICTED: dnaJ protein P58IPK homolog isoform X2 [Cucumis melo]) HSP 1 Score: 265 bits (677), Expect = 1.34e-84 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. NCBI nr
Match: XP_008449262.1 (PREDICTED: dnaJ protein P58IPK homolog isoform X1 [Cucumis melo]) HSP 1 Score: 265 bits (677), Expect = 4.90e-84 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. NCBI nr
Match: XP_022143788.1 (dnaJ protein P58IPK homolog [Momordica charantia]) HSP 1 Score: 244 bits (623), Expect = 5.83e-76 Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. NCBI nr
Match: KAF8006155.1 (hypothetical protein BT93_K0460 [Corymbia citriodora subsp. variegata]) HSP 1 Score: 228 bits (581), Expect = 2.09e-72 Identity = 128/148 (86.49%), Postives = 138/148 (93.24%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy TrEMBL
Match: A0A0A0KF24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445030 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 2.05e-87 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy TrEMBL
Match: A0A1S3BLM7 (dnaJ protein P58IPK homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491196 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 6.47e-85 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy TrEMBL
Match: A0A1S3BLN0 (dnaJ protein P58IPK homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491196 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 2.37e-84 Identity = 145/147 (98.64%), Postives = 146/147 (99.32%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy TrEMBL
Match: A0A6J1CRL1 (dnaJ protein P58IPK homolog OS=Momordica charantia OX=3673 GN=LOC111013621 PE=4 SV=1) HSP 1 Score: 244 bits (623), Expect = 2.82e-76 Identity = 137/152 (90.13%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. ExPASy TrEMBL
Match: A0A6P4AVK2 (dnaJ protein P58IPK homolog OS=Ziziphus jujuba OX=326968 GN=LOC107433098 PE=4 SV=1) HSP 1 Score: 234 bits (596), Expect = 2.03e-72 Identity = 126/147 (85.71%), Postives = 137/147 (93.20%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. TAIR 10
Match: AT5G03160.1 (homolog of mamallian P58IPK ) HSP 1 Score: 189.5 bits (480), Expect = 1.9e-48 Identity = 104/135 (77.04%), Postives = 121/135 (89.63%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. TAIR 10
Match: AT5G48030.1 (gametophytic factor 2 ) HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16 Identity = 48/97 (49.48%), Postives = 62/97 (63.92%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. TAIR 10
Match: AT5G01390.2 (DNAJ heat shock family protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14 Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. TAIR 10
Match: AT5G01390.3 (DNAJ heat shock family protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-14 Identity = 42/95 (44.21%), Postives = 65/95 (68.42%), Query Frame = 0
BLAST of Cucsat.G1612.T6 vs. TAIR 10
Match: AT3G08910.1 (DNAJ heat shock family protein ) HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14 Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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