Cucsat.G15970.T22 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15970.T22
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description4-alpha-glucanotransferase
Locationctg2178: 656574 .. 665678 (-)
RNA-Seq ExpressionCucsat.G15970.T22
SyntenyCucsat.G15970.T22
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCCATTTTGAGCTAAAATTACAAAATCAATTTGAGCCTCTCTACCCCGCTGCCACCGTCGTCATCACATGTTACTTAAGAATTAGTAGGCTGTCTCTCGATTTCCGAGCTCAATTCTGCAACAATGGCGATCTCAACCTCACTATTCTCTTTTCCTCTAGCTCCCAAGCTTCGTAATCCCTCATTGCCTCTCTTTTCCGCTACTACTTCCCTCTCCACCAGGAGATTTCACCTCTTCTTATCTTCTTCCTCTAAAGTTTCCACCATTTTCGATACAGTCACTGTGGGGGAGGATTTTCCGACCCAATATGGAGAATGGTTTCCAGAATCGGATCCTGACATTCGGCGAAGGGCTGGTGTTCTGCTTCATCCTACGTCGTTTCGAGGCCCTTATGGCATTGGTGATCTTGGTGATGAAGCTTTTCGATTTGTTGACTGGCTTCATGAGGCGGGTTTCTCTGTTTGGCAGGTTTTATTCCTACTACTTGTCTTTTGAAGCAATTTTTGTAATGCTTTAAGTATGGTAATTCTTGAATTTATGAAGCAATGATCCATGGATATATTTATGAATCTTTCTACTTGAGTGAGCTTTTCCTTGTGTTCCCCATCAATCATTTCACATCTGATTAAATGGAATTTAATGTAAAGAAGCTGACACTTACTGGGTTTCATAGTCGTAGCAATTTCTTCTTTTGTAGTGTTGGATTTTAAGGATGGTGAGGAGGAAAATGGAAAGAATTTTTACTTATATATATTTGTTTTGTTTGTAGGATAGGAAGAAGATTTGGAAATTTTGGAATTTGATAGTTTTTTTAAAAAATTTACTGATGCGACTATGCAGGTTCTTCCTCTTGTCCCTCCAGGAAGGAAAGCCAACGAAGAGGGATCACCCTACTCAGGCCAGGTGATGACCTTTTTAGTTCTCTTTCTTCCCTGCTTCCCTCCTGTTTCTTTTATCCTTCCATTGTTTAAGGTGGGGGATGGGACGGTGTGATTAATGAGAGTTTACCTCAATGTCCCAATGGAGATTAAACATTCAAAAGGAAATGTACCTATCACAATGAATCTTGAATACCGTAAAGAAAGTAGCTTTTGCCATTTGGGAATAGGTTGATGCATTTTGTTATTTCCGTCTCAGTTATGTGTGGGGTTGAGTTAGCCATTCCATTCATTACCAGCATACTGAAGGAGGGTGCAGCAAAAAACCCCTGATTTGAATTTTTAATGAAATTGTCACGTTATTCTGCCCTATTTTATCCACCATTTTGAAATGTTTAATTTATTGAAGATGAAATTTAGATCACATCCAATATCATCTGGATTTAAAAATAAAATGAATGCAGCAGATTGGTAGGTGAACGTGAATAGTTGTGATTAGTGATAAGTGGTGGTTGTTAGGTGGTCTACGCTATTCTATATTTCCCAGATCCTGTTGACGATCCTTCTCACTCCAAGGACATTAGTCATCGTTAAACTAGCATGGTTGTTTCTTTGGTACCTCATTAAGCTGTCTTTCTGTGCTTTTTATATTTTCTGGACCTTTACAATCATATAAGTACTCATTTTTACGAGACTGCTGTGTCTGGTTGTAATAGATCATGTTACTCATTATCGATAGAGGCGGTGGAGAAACCCCAACGGAAAATAAATACTTTAGCTGACTTTTAGCTCTTTTCATACGGTAGCTATCTGAATATGTGTTCCAGAGTCAAGCCAGTTTTTAGTAGGGGGTATACTCAACATGTTTTATGACTCACCATTTCAGGCTAAGGGAGAAATCCTGTGGTGTGCATTTTCTTCTTCTTTTTTTTCTTCTTTCTTTTTTCCCTCTTCTATTTCCACTTCTTGGGTGTCTATTTCTAAGAGTATTTACAGCTGTTTATTATCTCGTATTCGTAGTAGTGGAAGTATCTTTTGTAATCTTGTGGTTTTTAGTTTGTACAAGCTAAATAGGCTCTCCTTCTTTTGTGAGTTTCTATCTTTTTATTATTAGTCTTTTTCTGTCCATTTGTATTCATCCGTTTGTCTTAGTAGAAGCTTGGTTTTACATTAACAAAATGTCTCTCAATTTTATTGGTGTGTTTACTTTTTATCTGATGTACATTGTTTTATCTGTTAAAAACTTTCAGGATGCAAATTGTGGCAACACTCTCTTGATCTCTCTTGATGAGCTTGTCAAAGATGGTTTGCTCACAAAAGATGAGTTGCCAGAACCAGTGTAAGAAACTTTACTTTTCGGCAGATAACTATTAATTGTTTTCATTTCCTTTATAATCTCTCATGAAAGGGACACTATGAAGTAATCCTGCCCCTGAATGGATACTTGCAGCGACCATGACCATGTAGTCTTCTCCACTGTTGCTGATATAAAGGATCCCTTGATAGCAAAGGTGAGTACTTAAGACTTATGAATGGTTGCTATTGGCTGATGTAATCTGTTGTACCTGATTTGTTATATCTGCTGTAACATACTCTTTTATTTCCTCTCTGTTACCCATTATTTGGGGCTGTCTAGAGTTGTTATCAGGATGACAGTATCTATAAATACTGATACTTTGTACTGTTGAGTCTCGACATGTGAGAATTATATCACTCTCTTACTCCTAGTAGGAGATTTCAGTTGCATCTCAACATTCATGTATTGCTTTTATGTGTACTTGAAAATCAGTTTCAACTTGGAATCTGTCTTCCTTAGCTTCCTACATTTTCTTACAGTCTCCTTATTAGTTTTGAACAAGAAATTTTGTTTGAAATGAAATAAGAGAAACCCAAACACCAATAGGTGTTACAATAAAGATTCCCAATCAGAAACTAAATAAGAAAGATTAAAACTTTTAAAAGGTACTTAGTTTTACACCAGTGTAACTTAGTAGACAACCAAATCCACGAATCTATCAAAACAAATAAAGGAATCTATAGGGAGACGCTTATTACACTCACCACATAAATTCTAGAAAAGAGCACGCAATATGACCAACCAAATAATCTTCTTTATACCACAAATGAGACACTTTTCTACCAAAGGGGATAACCTTACTTGAACAGAATCTGTTCTATAGGTTGTACAATTGTGTTCTTTAATTCTACATAAGGGGATAACCCTAAACTTAAACAAGACCACGATATTTATTACTCAACCTTGAGAAGATCTTCAAGGAAGGAAGAAAATGAAGAGAAGCTACTGAATCTACAATACACGTCGACAGATAAAGAAAAAATATTTTGCAAAATTTGCTAGCTACATAAGATTATTCTTGAGATCATGCAGGACATGTTGCTAAGGATAGAAAAGTTGAAAAAAGGCTCACCCTTCTTGTTGGATTGATTGAGAGGGGTTTTGCATGGAGAGTCCTTCAGAAATTTTACCTTGGAGTTAGGCAAAAAGAACTCGGTAGTGAGGAATTGGAGCATTTGGATAGGTCAACCGAACTTGAAAGTCAGAAACGTTTTGAGCCTCTAGAAACTGATCTCAACGCCCTATTTCAATGTGAGGAAGAGCCTGAATCTGCAAAGTTGCCATCTGCTACTCGTTCTTGTCCCCAATCTTGCGAAATACCAGATCATTTAAAATCAATAGTTGCTGATTGTGGAATTATTCTAATTTGATTCTTCAGCAGTTTAATGTATTTTCCTCAGTGTAAGACCAACTTCAGTCATTCTTGGATTTCCCTTCATATGGGTGGCAAGTAAATCCTTCACGCCGCTGCTGATTAGTGGAAGACTTCTTTGAGCTTCCTCTGGATTATGAATTAATTTGGTTAGGCAGTTTCAAGGCAGCCAGTTGCATCTTCTTGAAAGTTTTTAGTTTAAATGTAGTTCTTTATGAGAGGATTTTGCATTATGCTTTGTAATTAGATTTCTTCGGATATGATTTTGTTTAGCTTGATCTCTTCATTGTTTAGCTTGATCTCTTCTATTTTGAAACTGTTTTGTAGCTTTTGTTGTAGAGGTAGACTGAATTTTCTCTTTTCTCTTGCTCTTAGTATAAAATTCTGGTACTTTGAGCTTAAGGCTCTTTTATTAATAATAATTTAAGAGGTTTGTCTCCTTTTAAAAAAAGGGGTAATTGTAAATTTAGCAATTAGATTCAAAATAATTAAGTATATAGCAACATTTTAAAAAATTTGCAAATATAGCAAAATTTGTCAAATTCTATCAATGATATGAGTCTATCAACGATAGACCATGTTGCAAATATTGGTCTATCACTGATAGACTATACGAAATGTATCGGCGATACAAGTCTATCAGTGATAGTTTTGCTATATTTGCAATTTTTTAAAATTTTGCTATATCCTTAATTATTATTGCTGAAATGGTTATCCATTCTAATTCCCTTAAAAAAAAGGATAGAAAAGAAAACTAGAAAATATGTACTACACGTATTCTCCAGGTAGCACGATATGAAACATGTTGCTGACTTAATACAAGACATGTCACAAAACATTTTGTTCAAGTTTTGTTTGTAATAAAATCAACCAGTCATACTGCAGTAACAAATACAGATTTACAAGCACGTTGATAACTTCCAATTCTGTGTTATTTTTAATAAATTTATATAATCTGAGTATTTATTTAGTTATTTTCTTTGGTTATGTCATAGGCTGCAGAAAGGTTAATTCAAAGTGATGGTGATCTTAAAAGACAGCTTGAAGAATTTTGTAAAGACCCTGAAATATCAAGTGAGTTCTAACATAATCTAACTGATATCATGGTTCACCTATAATATTTTGCAGAACTTCTAGTTTTTTTTTTTTTCCTTTTTTTGAAACGGAAACAAGCTTCTTCATTGATCTAATGAATGAGATTCTTCTAGTTTGTATTAAGATTTAGATCTTATGGATTGTTAAAAATTGTACATGATAAACTATCTTATCTACCTATTTCATTCTTTCTATCTTGCTAAAAAAAGGTTAGTGAAGGTTTGTCAAACTAGTTGCCTTTACTTGGATTTTTTCTAAGATCTGTCAATCTAATTCAAGCCCTCAATTATTTCAAGAAAAGGTGTTCAAATTAGGCTGCTAGCCTCCTCAATGACCCGGATCTTCAGCTGTAGAGTTGGCATCTGCGACCAAAATTCAGTTATGCTAAGCTGCCAAATTTACTTCACCATGAAACCTTTCTTGAACCGACTTGTTAATACATAATTAGTTGTGAATTTTTTGCTCCTTCACTTGGTACCAATACTTCGGAAATTATCCCCTAATTTCAGTTTTACTGAACGACAGCTCAAATACACTCATGTCAGATTGACCATTCAATAATGTCTGTGGTTAATTAATTAATCATCTAACTGAATAGTTGAGAACAACTCTTTTTTTTTTTTAATCAATGACGAGTTTCCTTTAAAAGAAATAAAACAGCTCTTCTTACTCTTCTTTGCTCTTTCTCTCATTCTTGTTCAATTTTTCAGGCTGGCTTGAAGATGCAGCTTATTTTGCTGCTATTGATAACAGACTAAATTCTTTCAGTTGGTATGAATGGCCAGAACCTCTAAAAAATCGGCATCTTTCAGCTTTAGTAGAGGTTTTCCAAACGGAAAGAGATTTTGTAAGTTTTTAGTGGATTCTTTAGTTTGACTTTTATTTTCATAGTCGGTCGCCTAATTGTTCACACATACTTTTGTTTTTTTGCAGATAAATATATTCATTGCTCAACAGTTTTTATTCCAGAGACAATGGCAAAGAGTTCGCAGCTACGCAAATATGAAGGGTATTACTATAATGGGGGACATGCCTATATACGTTGGCTATCAGAGTGCAGATGTTTGGGCTAATAAGAAGCAATTTTTGCTGGTATGTATTGCTTCTGGATGAGTAGAGATAGATGAAAATCTACTATTGGAATATTCTCATTATGTTGCCTGCTAAATGCTAGTGCTAATCATAAGTTTTTCTGGCAGAACAAGAAAGGATTTCCCTTGTTAGTGAGTGGTGTGCCTCCAGATGCATTTAGTGAAACTGGTCAACTATGGGGAAGGTGTGTTATGCACTTGTCTCATTCACATGGTTGATTGCTGTTTTCTGATGAAATATGTTTTCCATTTTCCCGTAGTTCTTACATATGGTCATATTCCTTGCCTATTTTCGCAGAATGAATTTTTTTAGATCAGGTTGTAAAGAAAGCTCATTCAATATTTTATCATACTATATTGTGTATTATACGTGTAATTTTTTTTTGTGATTTGCACTCGACCGAGAAGCTAGATTTGGTCCCCCCTCCATAATAAAGGTTGTTTTCAGATAAAGAAAAATGATCCAAAATATTTACAAAACATAGCAAAATTTTTAGAATCGGTGTCTATCAATGTCTATCATTGATAGATTCTAAAATTTTGCTATATTTGTAAATATTTTCAGTGGTTTTGTTATTTGCAATAATGTTTTTAATAATAACAATAATAAATCCATTGTGATTTTTCATTATATCATCGTAAATGTTTTCTGTCATTTTCTTTTATGCAATATTTCTCAAAATTATTCCTGTATTTGCCTTATTGATTGATAATTTTATTTGGAGTAAACCTGACAAGAAATTGCTTTCTAATAAATTGATCTCTATTTGGAATTTGAAAGTCCTCTATATGATTGGAAAGCCATGGAGAAAGATGGTTTTTCTTGGTGGATTCGGCGCATTAAACGTGCACAGAATCTATATGATGATTTCCGGATTGATCATTTTAGAGGATTTGCGGGTTACTGGGCAGTTCCTTCTGGTAGGCTTTTATGAAATACTTTTATCAGGTTACATAACATGTTTCTTTGTTTTGTTCATTGTGCTAATATGTTGCAAATGTACAGAGGCAAAAATTGCTACAGTTGGACGGTGGAAGGTCAGACTTATAATTTGGCAGGTTCTTTTTAGTTTGTGCTTTGATATCATAGTATCTTCTTCAATAGTATCTTTTATGACAGTAGGCAGGGCCTGGAAAATCTTTATTTGATGCCATATCCAGAGCTGTTGGAAAGATCAACATAATTGCAGAAGATTTGGTATGTTTTTTATGGATAAACATGTACTCAAATCATAGCGACCGATTAAATGCTCATTGCATTGTGATGTGATTCCTTGTATTGGTTTTAACATCATTCATCTTTTTAACTTTCAGACTATTTTTTTTCCCACTTCTCCTATTCCTATATTTATCTTCACTCAAAAAAAAAAAAACTTTCAGACTAACTACTTTGGGTTTTGGAATTTATATTTTAAGCCATAAGCTTAAGAGGTTAAAAACTTGCCACCAACTCATCATAACACCCTTTGTTTTAGTATCCAAAATGTCACTCATGAATTAAGTAATGTGCACTTGTATTTAGGAAAGTAAAAGAGCATAGTTCCACTTTGTTTTCTATCATATTGCTCCCCGTTTTAATCTTCCTTATCAGTCGTGAAAAAGGAAACTCGTGGGGATATCTTATGTAGATTATTTGGTTAGTGCTATTATTATCATCCCCATCCCTCTCTCAAGTTACAATTGAATTCTTTTTCTTTTAGTTTTAGCTACATGTTCCATTGGTTTAACCACCGTATTACAGGGAGTTATTACTGAAGACGTGGTTCAACTCAGAAAATATATAGGGGCACCTGGAATGGCTGTTCTCCAATTTGGTATAACTATTATATATTCTCTTTTTTGAAGAGATTCTCTTGAAGTGTTTTTTCTCGGTAATTGATATGCATTGTTCAAACAGGTTTTGGAAGTGATTCTGCTAATCCGCATTTGCCCCACAATCATGAACCTAACCAAGTTGTCTACACGGGAACTCATGATAATGACACAGTAATAATTTCCGTGTTTCCTTGTATCTCATTGTTTGTAATATGTCGTAAAATCTGATGTTGGCAAATAGACATGCATCTTTGAATTAACAGTTCGCATCTGATTTATGTAAACAAAATTGGTTTTTCCTGGTGAAATTTTGTAAATTGTTGTAATGTTATAATGCAGATGCGTGGCTGGTGGGACAATTTGAATGAAGGAGAAAAGTCCAATGTTAGCAACTGAACCTAACACATTCACACGTGCAAAAACTACAGTAGTTTCTGAATATTGTTTCAAAGCTACTAATTTTTGCATAATTTTGGATTCAATGAAAAGAGAACCATAGGAAAATGCAATGAGTTGTGACACATCTCTGTTGTTACAGGTACTGAAGTATCTTTCAGTTAGTGAGAAAGACGATATCCCTTGGGTTCTCATCCGGGCAGCATTGTCTTCTGTGGCACAAACTGCCATAATACCTTTGCAAGATGTTCTTCGATTAGGGAATTCTGCAAGGATGAACACTCCAGCAACACAGGTAACTCTATACCTTCACACTCAGATATCCAATTAGTATTGTTAATTGTCACAAAGCACAACATTAAGCATTTGAGTCGAATGCATTCAAGACATTTCCATGACTGCTCTTTAACCATACCAGAGTTCTTAGATCTGCACAGAAAATGATATTTTCTAAAATTGATATGGTTTACAATTTACTTCACTAGCTCATGTGTGCACACCGGTGCTTTCAGTAGTACAAAAAGATATCAACAACACTCAAAATCCTACAACGTTTTACTTTTATTATACCATCTTAAATGTGTAATGTAGGAAAAAAGACCATGCATTCAATAGGAAACTTTATTTTGAAGAAAAAATGTGAAGAAGTTTAGATTCTCTTAGAATGAAATATGATATCTATGGATTTGATTGTTATAATGATTCAGTGTGTAAGATATGTTTGTACTTGCTACACAGTTTGGAAACTGGAAATGGAGAATACCTAATTCCTTAAGCTTTGAGAGTTTGGATACAGAAGCAAGTAAATTGAAGGATATGATTTCATTGTATGGGCGGCTGTAAGCCAAAAATGCTGGCTTTGCGTAATCACAAATTGTTGTTTTATATTAGTAGTTTCATGAAGTAAATAGATTATCAAATGTAATAAATGTGATTGTGCAACTCATTGGAGAAGTTTAGTTGAAGCAATAAAAAAAAACTCAAAATTTCTTCAGTTATATGCCATCTTTGTTAACAGCTAAATATTAGCATGTAGATTCATATAGACATCAAGAGACTCTTGCTATGAAGAGAACCATCAAAACTTCAATTTAGTCTC

Coding sequence (CDS)

ATGAAGGGTATTACTATAATGGGGGACATGCCTATATACGTTGGCTATCAGAGTGCAGATGTTTGGGCTAATAAGAAGCAATTTTTGCTGAACAAGAAAGGATTTCCCTTGTTAGTGAGTGGTGTGCCTCCAGATGCATTTAGTGAAACTGGTCAACTATGGGGAAGTCCTCTATATGATTGGAAAGCCATGGAGAAAGATGGTTTTTCTTGGTGGATTCGGCGCATTAAACGTGCACAGAATCTATATGATGATTTCCGGATTGATCATTTTAGAGGATTTGCGGGTTACTGGGCAGTTCCTTCTGAGGCAAAAATTGCTACAGTTGGACGGTGGAAGGTCAGACTTATAATTTGGCAGGTTCTTTTTAGTTTGTGCTTTGATATCATAGTATCTTCTTCAATAGTATCTTTTATGACAGTAGGCAGGGCCTGGAAAATCTTTATTTGA

Protein sequence

MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYDWKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWKVRLIIWQVLFSLCFDIIVSSSIVSFMTVGRAWKIFI
Homology
[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match: Q06801 (4-alpha-glucanotransferase, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4113 GN=DPEP PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.8e-59
Identity = 99/113 (87.61%), Postives = 109/113 (96.46%), Query Frame = 0 

Query: 2   KGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYDW 61
           KGI+IMGDMPIYVGY SADVWANKKQFLLN+KGFPL+VSGVPPDAFSETGQLWGSPLYDW
Sbjct: 286 KGISIMGDMPIYVGYHSADVWANKKQFLLNRKGFPLIVSGVPPDAFSETGQLWGSPLYDW 345

Query: 62  KAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWKV 115
           KAMEKDGFSWW+RRI+RA +L+D+FRIDHFRGFAG+WAVPSE KIA +GRWKV
Sbjct: 346 KAMEKDGFSWWVRRIQRATDLFDEFRIDHFRGFAGFWAVPSEEKIAILGRWKV 398

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match: Q9LV91 (4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic OS=Arabidopsis thaliana OX=3702 GN=DPE1 PE=1 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 8.5e-57
Identity = 95/113 (84.07%), Postives = 104/113 (92.04%), Query Frame = 0 

Query: 2   KGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYDW 61
           +G+ IMGDMPIYVGY SADVWANKK FLLNKKGFPLLVSGVPPD FSETGQLWGSPLYDW
Sbjct: 286 QGVDIMGDMPIYVGYHSADVWANKKHFLLNKKGFPLLVSGVPPDLFSETGQLWGSPLYDW 345

Query: 62  KAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWKV 115
           KAME D +SWW+ RI+RAQ+LYD+ RIDHFRGFAG+WAVPSEAK+A VGRWKV
Sbjct: 346 KAMESDQYSWWVNRIRRAQDLYDECRIDHFRGFAGFWAVPSEAKVAMVGRWKV 398

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match: Q8LI30 (4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=DPE1 PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 8.2e-52
Identity = 87/111 (78.38%), Postives = 97/111 (87.39%), Query Frame = 0 

Query: 3   GITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYDWK 62
           GI+IMGDMPIYVGY SADVWAN+K FLL+K GFP  VSGVPPDAFSETGQLW SPLYDWK
Sbjct: 305 GISIMGDMPIYVGYHSADVWANRKSFLLDKNGFPTFVSGVPPDAFSETGQLWNSPLYDWK 364

Query: 63  AMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 114
           AME  GF WWI+RI RA +LYD+FRIDHFRG AG+WAVPSE+K+A VG W+
Sbjct: 365 AMEAGGFEWWIKRINRALDLYDEFRIDHFRGLAGFWAVPSESKVALVGSWR 415

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match: Q59266 (4-alpha-glucanotransferase OS=Clostridium butyricum OX=1492 GN=malQ PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 66/112 (58.93%), Postives = 79/112 (70.54%), Query Frame = 0 

Query: 2   KGITIMGDMPIYVGYQSADVWANKKQFLLNKKGF-PLLVSGVPPDAFSETGQLWGSPLYD 61
           K I I+GD+PIY+   S+DVW+N   FLLNK+   PL VSG PPDAFSETGQLWG+P+YD
Sbjct: 197 KNIKIIGDIPIYIAQDSSDVWSNPDIFLLNKETLEPLKVSGCPPDAFSETGQLWGNPIYD 256

Query: 62  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRW 113
           W  +EK  F WW+ RIK +  LYD  RIDHFRGF  YW+V    K A  G+W
Sbjct: 257 WGYLEKTNFEWWVDRIKSSLKLYDILRIDHFRGFEAYWSVDYGEKTAQNGKW 308

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match: O66937 (4-alpha-glucanotransferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=malQ PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.0e-35
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 0 

Query: 2   KGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYDW 61
           +GI+I+GD+P+Y  Y SADVW N + F L+    PL V+GVPPD FS+TGQLWG+P+Y+W
Sbjct: 199 RGISIVGDLPMYPSYSSADVWTNPELFKLDGDLKPLFVAGVPPDFFSKTGQLWGNPVYNW 258

Query: 62  KAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRW 113
           +  EK+GF WWIRR+     L+D  R+DHFRGF  YW VP   + A  GRW
Sbjct: 259 EEHEKEGFRWWIRRVHHNLKLFDFLRLDHFRGFEAYWEVPYGEETAVNGRW 309

[Close]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match: XP_031737018.1 (4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X2 [Cucumis sativus] >KAE8651953.1 hypothetical protein Csa_006021 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 8.97e-78
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 247 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 306

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK
Sbjct: 307 WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 359

[Close]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match: XP_004148438.1 (4-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 250 bits (638), Expect = 2.05e-77
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 282 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 341

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK
Sbjct: 342 WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 394

[Close]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match: XP_008457890.1 (PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucumis melo] >KAA0045884.1 4-alpha-glucanotransferase [Cucumis melo var. makuwa] >TYK13703.1 4-alpha-glucanotransferase [Cucumis melo var. makuwa])

HSP 1 Score: 247 bits (630), Expect = 3.49e-76
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 286 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 345

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYD+FRIDHFRGFAG+WAVPSEAKIATVGRWK
Sbjct: 346 WKAMEKDGFSWWIRRIKRAQNLYDEFRIDHFRGFAGFWAVPSEAKIATVGRWK 398

[Close]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match: XP_023512817.1 (4-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245 bits (625), Expect = 2.12e-75
Identity = 108/113 (95.58%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFP+LVSGVPPDAFSETGQLWGSPLYD
Sbjct: 290 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPVLVSGVPPDAFSETGQLWGSPLYD 349

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWW++RIKRAQNLYD+FRIDHFRGFAGYWAVPSEAKIAT+GRWK
Sbjct: 350 WKAMEKDGFSWWVQRIKRAQNLYDEFRIDHFRGFAGYWAVPSEAKIATIGRWK 402

[Close]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match: XP_022971685.1 (4-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucurbita maxima])

HSP 1 Score: 243 bits (621), Expect = 8.33e-75
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFP+LVSGVPPDAFSETGQLWGSPLYD
Sbjct: 290 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPVLVSGVPPDAFSETGQLWGSPLYD 349

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           W AMEKDGFSWWI+RIKRAQNLYD+FRIDHFRGFAGYWAVPSEAKIAT+GRWK
Sbjct: 350 WNAMEKDGFSWWIQRIKRAQNLYDEFRIDHFRGFAGYWAVPSEAKIATIGRWK 402

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match: A0A0A0LQ32 (4-alpha-glucanotransferase OS=Cucumis sativus OX=3659 GN=Csa_2G296010 PE=3 SV=1)

HSP 1 Score: 250 bits (638), Expect = 9.93e-78
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 282 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 341

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK
Sbjct: 342 WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 394

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match: A0A5D3CP83 (4-alpha-glucanotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002270 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 1.69e-76
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 286 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 345

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYD+FRIDHFRGFAG+WAVPSEAKIATVGRWK
Sbjct: 346 WKAMEKDGFSWWIRRIKRAQNLYDEFRIDHFRGFAGFWAVPSEAKIATVGRWK 398

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match: A0A1S3C639 (4-alpha-glucanotransferase OS=Cucumis melo OX=3656 GN=LOC103497466 PE=3 SV=1)

HSP 1 Score: 247 bits (630), Expect = 1.69e-76
Identity = 111/113 (98.23%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD
Sbjct: 286 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 345

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           WKAMEKDGFSWWIRRIKRAQNLYD+FRIDHFRGFAG+WAVPSEAKIATVGRWK
Sbjct: 346 WKAMEKDGFSWWIRRIKRAQNLYDEFRIDHFRGFAGFWAVPSEAKIATVGRWK 398

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match: A0A6J1I6F3 (4-alpha-glucanotransferase OS=Cucurbita maxima OX=3661 GN=LOC111470358 PE=3 SV=1)

HSP 1 Score: 243 bits (621), Expect = 4.03e-75
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFP+LVSGVPPDAFSETGQLWGSPLYD
Sbjct: 290 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPVLVSGVPPDAFSETGQLWGSPLYD 349

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           W AMEKDGFSWWI+RIKRAQNLYD+FRIDHFRGFAGYWAVPSEAKIAT+GRWK
Sbjct: 350 WNAMEKDGFSWWIQRIKRAQNLYDEFRIDHFRGFAGYWAVPSEAKIATIGRWK 402

[Close]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match: A0A6J1EJ62 (4-alpha-glucanotransferase OS=Cucurbita moschata OX=3662 GN=LOC111434944 PE=3 SV=1)

HSP 1 Score: 243 bits (621), Expect = 4.03e-75
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPLLVSGVPPDAFSETGQLWGSPLYD 60
           MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFP+LVSGVPPDAFSETGQLWGSPLYD
Sbjct: 290 MKGITIMGDMPIYVGYQSADVWANKKQFLLNKKGFPVLVSGVPPDAFSETGQLWGSPLYD 349

Query: 61  WKAMEKDGFSWWIRRIKRAQNLYDDFRIDHFRGFAGYWAVPSEAKIATVGRWK 113
           W AMEKDGFSWWI+RIKRAQNLYD+FRIDHFRGFAGYWAVPSEAKIAT+GRWK
Sbjct: 350 WNAMEKDGFSWWIQRIKRAQNLYDEFRIDHFRGFAGYWAVPSEAKIATIGRWK 402

The following BLAST results are available for this feature:
BLAST of Cucsat.G15970.T22 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q068011.8e-5987.614-alpha-glucanotransferase, chloroplastic/amyloplastic OS=Solanum tuberosum OX=4... [more]
Q9LV918.5e-5784.074-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic OS=Arabidopsis thali... [more]
Q8LI308.2e-5278.384-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic OS=Oryza sativa subs... [more]
Q592661.1e-3558.934-alpha-glucanotransferase OS=Clostridium butyricum OX=1492 GN=malQ PE=1 SV=1[more]
O669377.0e-3554.954-alpha-glucanotransferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=malQ PE... [more]
BLAST of Cucsat.G15970.T22 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031737018.18.97e-78100.004-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X2 [Cucumis sativ... [more]
XP_004148438.12.05e-77100.004-alpha-glucanotransferase, chloroplastic/amyloplastic isoform X1 [Cucumis sativ... [more]
XP_008457890.13.49e-7698.23PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucumis melo]... [more]
XP_023512817.12.12e-7595.584-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucurbita pepo subsp. pe... [more]
XP_022971685.18.33e-7595.584-alpha-glucanotransferase, chloroplastic/amyloplastic [Cucurbita maxima][more]
BLAST of Cucsat.G15970.T22 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQ329.93e-78100.004-alpha-glucanotransferase OS=Cucumis sativus OX=3659 GN=Csa_2G296010 PE=3 SV=1[more]
A0A5D3CP831.69e-7698.234-alpha-glucanotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... [more]
A0A1S3C6391.69e-7698.234-alpha-glucanotransferase OS=Cucumis melo OX=3656 GN=LOC103497466 PE=3 SV=1[more]
A0A6J1I6F34.03e-7595.584-alpha-glucanotransferase OS=Cucurbita maxima OX=3661 GN=LOC111470358 PE=3 SV=1[more]
A0A6J1EJ624.03e-7595.584-alpha-glucanotransferase OS=Cucurbita moschata OX=3662 GN=LOC111434944 PE=3 SV... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003385Glycoside hydrolase, family 77PFAMPF02446Glyco_hydro_77coord: 2..113
e-value: 1.3E-47
score: 162.7
IPR003385Glycoside hydrolase, family 77PANTHERPTHR324384-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTICcoord: 2..114
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 1..121
e-value: 2.1E-47
score: 163.9
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 2..113

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15970Cucsat.G15970gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15970.T22.E1Cucsat.G15970.T22.E1exon
Cucsat.G15970.T22.E2Cucsat.G15970.T22.E2exon
Cucsat.G15970.T22.E3Cucsat.G15970.T22.E3exon
Cucsat.G15970.T22.E4Cucsat.G15970.T22.E4exon
Cucsat.G15970.T22.E5Cucsat.G15970.T22.E5exon
Cucsat.G15970.T22.E6Cucsat.G15970.T22.E6exon
Cucsat.G15970.T22.E7Cucsat.G15970.T22.E7exon
Cucsat.G15970.T22.E8Cucsat.G15970.T22.E8exon
Cucsat.G15970.T22.E9Cucsat.G15970.T22.E9exon
Cucsat.G15970.T22.E10Cucsat.G15970.T22.E10exon
Cucsat.G15970.T22.E11Cucsat.G15970.T22.E11exon
Cucsat.G15970.T22.E12Cucsat.G15970.T22.E12exon
Cucsat.G15970.T22.E13Cucsat.G15970.T22.E13exon
Cucsat.G15970.T22.E14Cucsat.G15970.T22.E14exon
Cucsat.G15970.T22.E15Cucsat.G15970.T22.E15exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15970.T22.C4Cucsat.G15970.T22.C4CDS
Cucsat.G15970.T22.C3Cucsat.G15970.T22.C3CDS
Cucsat.G15970.T22.C2Cucsat.G15970.T22.C2CDS
Cucsat.G15970.T22.C1Cucsat.G15970.T22.C1CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15970.T22Cucsat.G15970.T22-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006006 glucose metabolic process
biological_process GO:0005977 glycogen metabolic process
biological_process GO:0000025 maltose catabolic process
biological_process GO:0005983 starch catabolic process
molecular_function GO:0004134 4-alpha-glucanotransferase activity
molecular_function GO:0102500 beta-maltose 4-alpha-glucanotransferase activity