Cucsat.G15836.T4 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AATGAAGTTTCTTTTAATATTCTCAAGTGCTCTCTGACTCACCTATAAACCAAACCCTACAATTTTAGAATTTTAGAAATTATACAATTTTGCTAACATGCGCCACCATTGTTCTATTACTGTTCACTGCCACGTCAGTTCATTTTAGCACAACCTCCAAATTCTTAAAACTTGCTTCTTTTTCTTTTTATTATTATTGTTCATTCACTGCTTTCCTTCTTCTTGTTCATCCTTTTTTTCTTCTTTTTATTTTAAAAAGCTCTTTTTTTAAAAAAAATAATAAATAAAAAAATCTGATGTAGTTTTCCCTTTACTTATATATAATTTTTTTTTCCTAATAATGATAGGAATGATTTCTTTCCCCCTGATACTTTACCCATTTCTCTTTCTGTCGTTTCTCTAACCTCTCTCATTTGGGTTTTTTCTTTTAGATTTTATTTAGCATTCTCTGTTTAGTTCTAGCTGGAAAGAAAAGGGTTTTTGTGAAAAGAGAGAGAAATTTGAAGCACAGATGAAGATGAGCTTTTTAATGGTGGAGATATGGCTTTTGGGTTCTCAGATCTGATGAAACAGAAGCTGTTTTGTACAAGTAGCTTAGACACTACAAAATGTGTCTTGTTTTCTTGGTCTCTTCTTGAGTTTATTCATTTCAGCTCTGTTTTAACTCAAGTCTTCTGAAGAATTTTCTGTTTGTTAGTTCTTTTTGGTCAAAATTCTGTATTCCTTTTGGGGTTTTGAGCAATTTGGTGGTTTGTTTTTTGACCGGTGGAATCGAGATCTGTTGAAAGGAAAAGAAGAGAAAAGAAAATGTTGGCTGTTGGTAGTCCTTTTACAAGTGTTCGTACCAGCTCTAGTTGTAATGCTTTGCTCAGAGAACTTCAGGTCTTTCTCTTTTTTTCTTTCTACTCTCTTTCTCTCCTACTTTTCATTCTCTTGCTTTCTTCTTTCTTGTTTTGTTTGTAATCTGCTTCACAATGATGGGTTTGTGAGAATCTCTTTGTTATATGCTTCTTCTCAAGGAGGCTTATGATGAGTTCTTAAGGGCTATTATAGTCTAGCTGCTAGTGCTAATGATTTCTCTTAGAAACATGAGAGACTGGTTGGTTTGTACTTTTTCACATTTCAGAACTCGAAGGCTTTCTTCTAAAAGCACTTTTTTGTGGTCTTCTTCCTAATTTTACCTTCTTCTCTGTTACTCTTGTTTAACTTTGTCCTAAATTTCACTATATCTGTTCTTAAGCTCGTTATGATTTTTAGTGAGATGCATCATATGGAGCAGTTTGATGTACTAATGATTATAGTTCACCTGAATGATACGTTTCTAGGCTTTCTTTTTAGCTTTTACTGATTCCTCACATGATAGAAGTTTACTGATAATCTCTCAATTCTTATGAATTCAGCAAATATGGAGTGACATTGGCGAGAGTGAAGCTGATAAAGACCGTATGCTTCTGGAATTGGAGAGGGAATGCTTGGAAGTCTACCGGAGAAAGGTCGAGGAAGCTGCGAATGCCAAGGCACGACTACATCAATCTGTTGCATCGAAGGAGGCTGAGGTTGCAACATTGATGGCTTCTCTTGGCGAACTAAATTCTCCGGTAAAGATAGAGTTCTCTTGCAAATTATATTCCTGCATACTCGTTCTTTAAAGCTTGGAGAACTTTTAAGTTTGGATCCTTGAAATTGTTCTTAATTATTGGCAAAAGTTGAATGAATGTTCCCCATTACCATTTTGGTGGCATTTGTGTTTCTTATTTGTTTCCTGTGGTGGCAGAGTCAAATTGAGAAGAGGTCCAAAACATTGAAAGAAAAGCTTGCTTCTGTCACTCCCCTAGTAGAAGAATTGAAGACGAAGAAAGAGGAGCGTTTGAAACAATTTGCAGATATAAAAGCCCAAATTGAGAAGATCAGTGTCGAAATTTCAGGTTACAGCAACCATGTTAATGATCACATAATCATCAATTCTTTAACCCTGGAAGAAACAGACCTGTCTTTGAGAAAGCTCAATGAGTATCAAACACGTCTTCGCACCCTGCAAAAGGAGAAGGTTTGGAAATAGAAACTATAAGATATCATGTAATTGAGGATTGTGCCTTTTTATAGTTTTGCATTGTTATCATTTGACTGTTCTTCACATATTGAAAGCTATTTATTTTAAGTTGAATGATGATTGACTAGAAATTCTTTGCAGTCCGATCGACTTCATAAGGTTTTGGAGCATATTAGTGAGGTCCATTCTCTCTGTGGTGTCCTTGGCTTGGATTTCGGCCAGACTGTAAGTGATGTGCATCCGAGCTTAGAAAGGACGAGTATCGAACAAGCTACAAATATCAGCAATAGCACATTGGAAGGCTTAGAACACACTATTCTTACACTGAAAACAGAGAGGAAAACTCGAATCCAAAAGGTAAGCTTGCGTAGGTTTGGTCCTCGCTCAAGATTTTGTGTCGTCTTTTTCTTCTAACTTTAGAACTTGCTTCAACCTGCAGTTGAAGGACATTTTAAAATCATTATATGAACTTTGGAATTTGATGGACTCTTCACGTGATGAAAAGAGTAAATTTTCACGGATTACTTCCATCATGCGTGTATCTGAAACAGAAGTCACAGAACCGGGTCTTCTCTCCACAGAGACAATTGAACAGGTTTGAAGCATTCTCAAATATGATTTACATGTCGACTTTAAAACAAAAACTCTCAATTTTCATTTTGATGTCCCCAGGCGTCAGCAGAAGTGGAGAGGTTAACTAAACTAAAAGCAGGTCGAATGAAACAACTCGTACTGAAAAGGAGGTCTGAGTTGGAGGAGATTTGTAAAATGACTCACATTGAAGCTGATCCTAGCACAGCTTCTGAGAAATCAAATGCATTGATAGATTCAGGTAAATTGGTAATTAAATCCTACATTATTCAAATTTCCATCATGTCAATCTTAATAAAGACAATGGATGATACCATAGTCAAGCAAAAAAGAAACTTGATTACTGTATATGCTTGGTGTTTTATAGGTCTAGTAGATCCGTCTGAACTCCTTGCAAACATTGAAGTGCAAATCGTCAAAGTAAAAGAAGAAGCCACCAGCAGAAAAGACATAATGGACAGAGTAGACCGTTGGCTATCAGCATGTGAGGAAGAAAATTGGCTTGAAGAGTACAATAAAGTAAGCTGAGTATCTTGGTTTTTGCCGAGAGATATTGACTACTTTATATATCTTCTTTGCATTCATAAACGTTTTACGCTGCACTTTTGGGTAGTCAGTGAGGTTATGAACTCTTCTTGTTTTGCTTATAGAGTGAAACGAGATTATATAGGTTTACATTAACATCTTGTCTTTCGAATTGCAGGACGAAAACCGTTACAATGCAGGGAGAGGTTCACATGTTAATCTGAAACGTGCAGAGCGAGCGAGAGTGACTATCAGCAAAATCCCAGGTATTTTTCTTAGCAAGAAAACTTTATTCTCCTCATATCAGGATGAACAGAACATTCTTTATCCTTAAATTGGGTGGATTAATTGGCGAATCTAAGTTTTAACTTTATCAAGTTGATTTGAACTTAAAACTTTTCCAAAACTATCAATAAATTACTTCAATCTAACCCATAAAACATACAAATAGCGAAAACAAATATTCAGACACCATTAATCTGAATACCATAACCCAATAAAAACCAATCTCAATTCTCACAGTACTGACAATGAGACCAGCCCCCACAAAAATAGTTTCACAAAACTACAAGAGTGCTCACCCTTGCCCACAGATCTCTGAAGCAACAACCAACATGAGTATAGCAATCACAGTATCTCTACTTCGTCCAAAGAGTTGGTAGGTACCTGACATGAAATTTTACCTTAAGAAGCGTTTTTTTTTTTTTTTTTTGGATAAGAACCTCAAGAAGCGTATATCACAGAATGTTCAAATTTAATTCGTTGTCATGAAAACTTTTAGAAGTTTAGACTTGGAGGTAGAAAATGCATTCCTTCCAAGAATTGGTAAAGCAGCAATAGCTAATGAGCTAATGGTGTTTCTTTTCAGCTATTGTTGATAATCTGATACACAAAACTCTGGCCTGGGAAGATGAAAAGAAGACTATGTTTCTTTATGACGGGGTAAGGATTATTCCTCTGTTTTCTTTTGCAATCTACATCATTTGTATTCGGATGTTCATTAGTTCATCTTCATTCAGGCAAGATTGGTGACAATACTTGAAGATTATAAATTAAGTAGACAGCAAAGAGAAGAGGAGAAGAGGAGACACAGGGTACTTTAATTATGTTCTCATTTTGAATTATCAGGTTAATTCATTTTTTTACTGTCATTTCCTGAAAAGAAAGATCAATCTTCCATTGCCAGGATCAAAAGAAACTTCAGGATATGCTCCTCACTGAGAAGGAAGCTATGTACGGTTCTAAACCCAGTCCTCGGAAGAGCAACAGCTTTAGGAAGACTAATGGATATCGTGCAAATGGGAATGGATCGATGACACCCACGCCTCGCCGAAACTCTGTTGGTGGAGCAACCCCAGAGCTTTTAACTCCTAGATCTTATTCCGGTCGCCAAAATGGATACTTCAAAGAAATGAGGAGGTTGTCTACTGCACCATTGAACTTTGTGGCCATATCCAAGGAGGATACGATGTCGTATGCTTCGATTTATGGATCTGAGCCAGGCTCTCCCCCCCAGAGTTAAATCTTAATGCTCTCTCAATATGGTATGTCTACTTGTTTGAACGCTTCTAATATAATTAGTCTTGAGTCATTTCTTTTGTTGCCATGCTCTGCATATTCATTTTTCAACTCAGAAAGGGTAAAATAAGTTTATTTTCAACGGTAAACATTTATAACGTGTTTGGATTGACTTTCTAAATCTTTAAATGAGTGTTTATAAGTGTAAAAAAGGTGTTTACAGACCTTCGATTTAAATACTCAGCACTCTTTTTGTTAGCTATTTGGCACCAATTGTGATTCTTTTAGGTTTTTAACGAAGAGCTTGTATTTGATTTGCAGAAAGGTCACAGCGGTCGCAACTTGGATATCTATATACATGAACTAATGCAGCAGCAGCAACTTTGTGAATAGGAAACAAATTGTAAACTAGTTTACAACTGTGATTTGATAGGACGACTTGGAGGACGGATTGCAACTAACAGGTCGAGAAGGCATAAATGATGTGGTTTTTAGTGTATGGTATAAAATAGGTAGTGACGATAACAGATAAGTAGCTCAGAACAATGCATCTAAAAGTCTTGTAATGTTGAAATAGGAATGATTTGATATAGTAGGGAGTGCAACCACAATGTTCAGTGGATTTTGTTAGTGTTTCATGTGTTGTGTATATATTATCTTTCTCAAACAAAACCAACCATTTGATTTTAGATTCTTGATATTTTAAAGATTCATATTTCAGGTGTTCTATACGTGACTTTAATCTTCCTGCTATTTTCTTTAAATTATGC ATGTTGGCTGTTGGTAGTCCTTTTACAAGTGTTCGTACCAGCTCTAGTTGTAATGCTTTGCTCAGAGAACTTCAGCAAATATGGAGTGACATTGGCGAGAGTGAAGCTGATAAAGACCGTATGCTTCTGGAATTGGAGAGGGAATGCTTGGAAGTCTACCGGAGAAAGGTCGAGGAAGCTGCGAATGCCAAGGCACGACTACATCAATCTGTTGCATCGAAGGAGGCTGAGGTTGCAACATTGATGGCTTCTCTTGGCGAACTAAATTCTCCGAGTCAAATTGAGAAGAGGTCCAAAACATTGAAAGAAAAGCTTGCTTCTGTCACTCCCCTAGTAGAAGAATTGAAGACGAAGAAAGAGGAGCGTTTGAAACAATTTGCAGATATAAAAGCCCAAATTGAGAAGATCAGTGTCGAAATTTCAGGTTACAGCAACCATGTTAATGATCACATAATCATCAATTCTTTAACCCTGGAAGAAACAGACCTGTCTTTGAGAAAGCTCAATGAGTATCAAACACGTCTTCGCACCCTGCAAAAGGAGAAGTCCGATCGACTTCATAAGGTTTTGGAGCATATTAGTGAGGTCCATTCTCTCTGTGGTGTCCTTGGCTTGGATTTCGGCCAGACTGTAAGTGATGTGCATCCGAGCTTAGAAAGGACGAGTATCGAACAAGCTACAAATATCAGCAATAGCACATTGGAAGGCTTAGAACACACTATTCTTACACTGAAAACAGAGAGGAAAACTCGAATCCAAAAGTTGAAGGACATTTTAAAATCATTATATGAACTTTGGAATTTGATGGACTCTTCACGTGATGAAAAGAGTAAATTTTCACGGATTACTTCCATCATGCGTGTATCTGAAACAGAAGTCACAGAACCGGGTCTTCTCTCCACAGAGACAATTGAACAGGTTTGA MLAVGSPFTSVRTSSSCNALLRELQQIWSDIGESEADKDRMLLELERECLEVYRRKVEEAANAKARLHQSVASKEAEVATLMASLGELNSPSQIEKRSKTLKEKLASVTPLVEELKTKKEERLKQFADIKAQIEKISVEISGYSNHVNDHIIINSLTLEETDLSLRKLNEYQTRLRTLQKEKSDRLHKVLEHISEVHSLCGVLGLDFGQTVSDVHPSLERTSIEQATNISNSTLEGLEHTILTLKTERKTRIQKLKDILKSLYELWNLMDSSRDEKSKFSRITSIMRVSETEVTEPGLLSTETIEQV Homology
BLAST of Cucsat.G15836.T4 vs. ExPASy Swiss-Prot
Match: Q9SIS3 (65-kDa microtubule-associated protein 6 OS=Arabidopsis thaliana OX=3702 GN=MAP65-6 PE=1 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 1.0e-109 Identity = 214/310 (69.03%), Postives = 269/310 (86.77%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy Swiss-Prot
Match: Q8L836 (65-kDa microtubule-associated protein 7 OS=Arabidopsis thaliana OX=3702 GN=MAP65-7 PE=2 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.2e-103 Identity = 198/310 (63.87%), Postives = 265/310 (85.48%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy Swiss-Prot
Match: Q9FLP0 (65-kDa microtubule-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=MAP65-1 PE=1 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.6e-65 Identity = 136/292 (46.58%), Postives = 212/292 (72.60%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy Swiss-Prot
Match: Q8LEG3 (65-kDa microtubule-associated protein 2 OS=Arabidopsis thaliana OX=3702 GN=MAP65-2 PE=1 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 3.6e-62 Identity = 131/291 (45.02%), Postives = 205/291 (70.45%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy Swiss-Prot
Match: Q9C7G0 (65-kDa microtubule-associated protein 8 OS=Arabidopsis thaliana OX=3702 GN=MAP65-8 PE=1 SV=2) HSP 1 Score: 206.1 bits (523), Expect = 5.8e-52 Identity = 111/292 (38.01%), Postives = 189/292 (64.73%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. NCBI nr
Match: XP_004150149.1 (65-kDa microtubule-associated protein 6 [Cucumis sativus] >KGN49732.1 hypothetical protein Csa_017836 [Cucumis sativus]) HSP 1 Score: 566 bits (1460), Expect = 2.28e-198 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. NCBI nr
Match: XP_008466912.1 (PREDICTED: 65-kDa microtubule-associated protein 6 [Cucumis melo]) HSP 1 Score: 561 bits (1445), Expect = 4.32e-196 Identity = 302/306 (98.69%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. NCBI nr
Match: TYJ97132.1 (65-kDa microtubule-associated protein 6 [Cucumis melo var. makuwa]) HSP 1 Score: 555 bits (1430), Expect = 8.17e-194 Identity = 301/306 (98.37%), Postives = 303/306 (99.02%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. NCBI nr
Match: XP_038876242.1 (65-kDa microtubule-associated protein 6-like [Benincasa hispida]) HSP 1 Score: 550 bits (1418), Expect = 5.41e-192 Identity = 294/306 (96.08%), Postives = 302/306 (98.69%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. NCBI nr
Match: XP_022989842.1 (65-kDa microtubule-associated protein 6-like [Cucurbita maxima] >XP_022989843.1 65-kDa microtubule-associated protein 6-like [Cucurbita maxima]) HSP 1 Score: 536 bits (1381), Expect = 2.22e-186 Identity = 286/306 (93.46%), Postives = 297/306 (97.06%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy TrEMBL
Match: A0A0A0KMT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G092900 PE=3 SV=1) HSP 1 Score: 566 bits (1460), Expect = 1.10e-198 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy TrEMBL
Match: A0A1S3CTK6 (65-kDa microtubule-associated protein 6 OS=Cucumis melo OX=3656 GN=LOC103504260 PE=3 SV=1) HSP 1 Score: 561 bits (1445), Expect = 2.09e-196 Identity = 302/306 (98.69%), Postives = 304/306 (99.35%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy TrEMBL
Match: A0A5D3BBC0 (65-kDa microtubule-associated protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold174G00030 PE=3 SV=1) HSP 1 Score: 555 bits (1430), Expect = 3.95e-194 Identity = 301/306 (98.37%), Postives = 303/306 (99.02%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy TrEMBL
Match: A0A6J1JGX9 (65-kDa microtubule-associated protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111486909 PE=3 SV=1) HSP 1 Score: 536 bits (1381), Expect = 1.08e-186 Identity = 286/306 (93.46%), Postives = 297/306 (97.06%), Query Frame = 0
BLAST of Cucsat.G15836.T4 vs. ExPASy TrEMBL
Match: A0A6J1HCW1 (65-kDa microtubule-associated protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111462915 PE=3 SV=1) HSP 1 Score: 530 bits (1364), Expect = 4.08e-184 Identity = 282/306 (92.16%), Postives = 294/306 (96.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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