Cucsat.G15685.T2 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGATGGCGTTTCTTTAAAAACCCAAAAGATCCTTCCTCTTTACTCCTCTGTCTCCCCTGTCGCTCGGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGTAACTCTTCAAATCCATACAACTCTCGCTTTTCTTTTCCTACCTTCTTCCCTTATCTCTTCCTACTCGTTGATTTCCCCTTAACTCTTTTAACTCCACTTTTGCTAATTTCGCATTCAATCATCTCTTTAATTGTCTTTTCCCAATCTCGTTTTTTTTCTTCTGGGTCTTGTTTCTTTGTTTATATTTTGAACATAGACGTTTGTATGATGTGGACTTGTCTTTGGAGTTTGGAAGTTATGTTGTTTTTGTGGTGAATTCTTGATTCTCCAGATTTGGAGTTGTGTATTGCATGGAGGAGGATTTTGGATCTTTTGACTGTGTTCTTTGTTTCAAGGGGACTGGAGAATGTGTAAAGGAATCATAAATGTGTTGAAATGAGTGGTGGAAATGTTCTTATGTCTTCTTGAGGTCATGTTTGACTTTGTTTTGAATTTGTGCCATGGGATTGAATTGTGTATTGGAAATGGATTTTTGAATTTGGTTAGTTTTGATTATTATTATTATTATTTTCATTTCCTTTTACTGAAATAGAGAGGTTTTGATCTGGGTTTGTATATCTGTTTTCAACTTCATGCTTATCGTTGACATTTGTGCCTTTTGTTGGGATGACAGTGTCTTCCCTAGTGGTCCTAGAAATGAACTTTTGAGAGCTGTTTCTAACATTATGCTAGGCTGTTAAGTAGTGCAATGGGAGTTTTTCATGGCTCCCTTGTGTCTTATGTAACCATGGAGTTTCATTTGGGGTTCATTTTGATCCGCAAGGATTGCTTTTGTTTGTTTTCCCCTATTATAAAAAGATCTTTTTCTGAATCAAATTCATCTTCATCGTTCCCCCCACCCCCCTAATAAATAAATAAAATAGTGGTTCTACATCTGAACTGCTACTGCTAGGTTGTTTTAATCATTTTTCAATATAAGTGATTATTTAATCGTTCAATTTTTACTCATCTCTCTATCTCTCTGTTGATAGTTACATTTAATTTATTTTTATTTTCCTACTTATAGTTATTATTTTGTATAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTAATTGTGCTTTTACCCTACATTTTTTTTCTGACCTTGCAGATAGCATGTACAAGTAACTGTATGTTTATTATGCTGCATTTCTCAGATTTGCATTTTGTGTACTTATCAAGATGAGCTGCTGGATTTTTTAAAACAAATTTGCTTGCGTTTCACTTATCAAATGAATGATTAGAACTTTATGTGTGAACCTGTAATACAGTGGCTAGATTACGGGAAATAGTTAGTGGCGCAATGTCATATGCTTTATTCTTTGTGTGTTTTGCAGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGTCTGTTATCTTTATATTTACATCCTTCTCCAGTTACTTTCATCATGTCAAACATCTTGTCAAGTCTAGGTTTGTATATCATATTTGTGCTTACAATAATATGTGATTACTGGTAAAGAACATACAAGTGGCCATTATGACGTGGTCTGATACAATCATGTAAAAATGGCTTAGGTCTAGAAGATTCTCTTTATATTCCTTATATTTACTGTATCATTAATGTCATGCCAATAAGATGGTAGATGTTGTATGTCATTTATTACTGAAGAATCTTCAATTGTTAATAGTTTTGGACATTGAAACTCGCATAAGGGAAAAGTGAAATCTTGATTGAAGTTCCTTTTTCCTTAAAAAAGGTAACTGTTAGGTAACCTGATTTGAATTCTGCTACTTATTTTGGTTCACAATTGGTTACTGCAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAGAGTCTTGTATGCAGTATTCCATTTTCTTGTGCTCCTGTTTGTAGGAGGCTTATAATTTGCTAATAGAAGTATTTTTTCCCCAAAAAAATAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGGTACCGCAATCATTCTTCTCTCCAGTTGTTAAGTTTCTTTTCCCTCTCCTCTTGTATGTTTCAAATACTTATTCTGTATAAGTTTGGTTGGTGGTGGTGCAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAAGCTAATCAACAATGAGAAGCTTATGCAGCACACTAAATGGCGAATGAAGAGGGCTCAATGGTTCCTGTCAGCTAAGGCTAAGACACAGATTTTTCAAAGAGCGCAAGCTTAGGATGAATCTGCTGATCAAGCAGGGAGAATAGTGAGTTTGGTGAGTGGGGGCTGAAGCCAAAATAAGGGAAAAAAAATATTTGTATCTTCTTGTATTGTTGTATTGTATCATCAGACAAAGGTGAGTAGATAATGTAATAGTGAATGATAGAGCCATATATATGGATAAAAAAATGCAGCCATATTTTAGGCTTGTGTGTTTCTTTCTTATCAAAGACTTTTATGGGTTGGTGCAACACAACAGGCACTGTTATGTTCTTTCTATTATTAGCTTGAAAGAAAAAAAAGTAATGAAAAATTAAGAGATTTGGATATTGAACTATTATTTTTAATTTAGTCTTTGTTAATGTGTATCAGCATTTGGAAGGAAAGATGTAAAATGCATAGTCAAATTTCAAAGCACGATAATGAATTTTTAGAAGTTTTAGC GATGGCGTTTCTTTAAAAACCCAAAAGATCCTTCCTCTTTACTCCTCTGTCTCCCCTGTCGCTCGGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGACATTGGATCTCCTAGACCTGTGTGAGCAAGCAGGTTCAGCATCATAA DGVSLKTQKILPLYSSVSPVARLHIKPPSFSLTNSGSLNLGLLTLRDLHSFIDITIKCCNMDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPREKFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIYNMNAVYVKNNTNVAGNLPGAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCRALEEDSFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGSAS Homology
BLAST of Cucsat.G15685.T2 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 4.0e-76 Identity = 167/330 (50.61%), Postives = 202/330 (61.21%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 4.4e-75 Identity = 134/174 (77.01%), Postives = 151/174 (86.78%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.8e-74 Identity = 165/352 (46.88%), Postives = 209/352 (59.38%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.8e-74 Identity = 152/254 (59.84%), Postives = 180/254 (70.87%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. NCBI nr
Match: XP_004145666.2 (uncharacterized protein LOC101215772 [Cucumis sativus] >KGN58174.1 hypothetical protein Csa_017566 [Cucumis sativus]) HSP 1 Score: 741 bits (1914), Expect = 5.04e-270 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. NCBI nr
Match: KAG6581097.1 (hypothetical protein SDJN03_21099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 621 bits (1602), Expect = 4.32e-223 Identity = 297/315 (94.29%), Postives = 310/315 (98.41%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. NCBI nr
Match: XP_008450102.1 (PREDICTED: B2 protein [Cucumis melo]) HSP 1 Score: 614 bits (1584), Expect = 7.52e-221 Identity = 300/304 (98.68%), Postives = 302/304 (99.34%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. NCBI nr
Match: XP_038897034.1 (B2 protein [Benincasa hispida]) HSP 1 Score: 611 bits (1576), Expect = 1.25e-219 Identity = 297/304 (97.70%), Postives = 301/304 (99.01%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. NCBI nr
Match: KAA0042911.1 (B2 protein [Cucumis melo var. makuwa] >TYK05313.1 B2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 608 bits (1567), Expect = 9.63e-218 Identity = 296/303 (97.69%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy TrEMBL
Match: A0A0A0LB43 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585860 PE=4 SV=1) HSP 1 Score: 741 bits (1914), Expect = 2.44e-270 Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy TrEMBL
Match: A0A1S3BP62 (B2 protein OS=Cucumis melo OX=3656 GN=LOC103491791 PE=4 SV=1) HSP 1 Score: 614 bits (1584), Expect = 3.64e-221 Identity = 300/304 (98.68%), Postives = 302/304 (99.34%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy TrEMBL
Match: A0A5D3C009 (B2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001340 PE=4 SV=1) HSP 1 Score: 608 bits (1567), Expect = 4.66e-218 Identity = 296/303 (97.69%), Postives = 299/303 (98.68%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy TrEMBL
Match: A0A6J1F9B6 (B2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111442004 PE=4 SV=1) HSP 1 Score: 598 bits (1541), Expect = 1.40e-214 Identity = 287/304 (94.41%), Postives = 299/304 (98.36%), Query Frame = 0
BLAST of Cucsat.G15685.T2 vs. ExPASy TrEMBL
Match: A0A6J1J1D1 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482521 PE=4 SV=1) HSP 1 Score: 597 bits (1540), Expect = 1.99e-214 Identity = 286/304 (94.08%), Postives = 298/304 (98.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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