Cucsat.G15685.T16 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGCTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGTAACTCTTCAAATCCATACAACTCTCGCTTTTCTTTTCCTACCTTCTTCCCTTATCTCTTCCTACTCGTTGATTTCCCCTTAACTCTTTTAACTCCACTTTTGCTAATTTCGCATTCAATCATCTCTTTAATTGTCTTTTCCCAATCTCGTTTTTTTTCTTCTGGGTCTTGTTTCTTTGTTTATATTTTGAACATAGACGTTTGTATGATGTGGACTTGTCTTTGGAGTTTGGAAGTTATGTTGTTTTTGTGGTGAATTCTTGATTCTCCAGATTTGGAGTTGTGTATTGCATGGAGGAGGATTTTGGATCTTTTGACTGTGTTCTTTGTTTCAAGGGGACTGGAGAATGTGTAAAGGAATCATAAATGTGTTGAAATGAGTGGTGGAAATGTTCTTATGTCTTCTTGAGGTCATGTTTGACTTTGTTTTGAATTTGTGCCATGGGATTGAATTGTGTATTGGAAATGGATTTTTGAATTTGGTTAGTTTTGATTATTATTATTATTATTTTCATTTCCTTTTACTGAAATAGAGAGGTTTTGATCTGGGTTTGTATATCTGTTTTCAACTTCATGCTTATCGTTGACATTTGTGCCTTTTGTTGGGATGACAGTGTCTTCCCTAGTGGTCCTAGAAATGAACTTTTGAGAGCTGTTTCTAACATTATGCTAGGCTGTTAAGTAGTGCAATGGGAGTTTTTCATGGCTCCCTTGTGTCTTATGTAACCATGGAGTTTCATTTGGGGTTCATTTTGATCCGCAAGGATTGCTTTTGTTTGTTTTCCCCTATTATAAAAAGATCTTTTTCTGAATCAAATTCATCTTCATCGTTCCCCCCACCCCCCTAATAAATAAATAAAATAGTGGTTCTACATCTGAACTGCTACTGCTAGGTTGTTTTAATCATTTTTCAATATAAGTGATTATTTAATCGTTCAATTTTTACTCATCTCTCTATCTCTCTGTTGATAGTTACATTTAATTTATTTTTATTTTCCTACTTATAGTTATTATTTTGTATAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTAATTGTGCTTTTACCCTACATTTTTTTTCTGACCTTGCAGATAGCATGTACAAGTAACTGTATGTTTATTATGCTGCATTTCTCAGATTTGCATTTTGTGTACTTATCAAGATGAGCTGCTGGATTTTTTAAAACAAATTTGCTTGCGTTTCACTTATCAAATGAATGATTAGAACTTTATGTGTGAACCTGTAATACAGTGGCTAGATTACGGGAAATAGTTAGTGGCGCAATGTCATATGCTTTATTCTTTGTGTGTTTTGCAGGTTTGCCTCCAAGGTATAGGGACTCGGTGCGTGCAATAACTCCAGGCTTGCCTCTGTTTCTCTATAACTACACCACCCATCAGTTACATGGGATTTTTGAGGTCTGTTATCTTTATATTTACATCCTTCTCCAGTTACTTTCATCATGTCAAACATCTTGTCAAGTCTAGGTTTGTATATCATATTTGTGCTTACAATAATATGTGATTACTGGTAAAGAACATACAAGTGGCCATTATGACGTGGTCTGATACAATCATGTAAAAATGGCTTAGGTCTAGAAGATTCTCTTTATATTCCTTATATTTACTGTATCATTAATGTCATGCCAATAAGATGGTAGATGTTGTATGTCATTTATTACTGAAGAATCTTCAATTGTTAATAGTTTTGGACATTGAAACTCGCATAAGGGAAAAGTGAAATCTTGATTGAAGTTCCTTTTTCCTTAAAAAAGGTAACTGTTAGGTAACCTGATTTGAATTCTGCTACTTATTTTGGTTCACAATTGGTTACTGCAGGCAGCAAGTTTTGGGGGCTCCAACATTGATCCGACTGCTTGGGAAGACAAGAAATGTAAAGGTGAATCCAGGTTTCCGGCTCAGGTAGAGTCTTGTATGCAGTATTCCATTTTCTTGTGCTCCTGTTTGTAGGAGGCTTATAATTTGCTAATAGAAGTATTTTTTCCCCAAAAAAATAGGTAAGGATCCGCATTAGGAAACTCTGCAGGGCACTAGAAGAAGATTCCTTCCGGCCAGTCTTGCACCACTATGATGGTCCAAAATTCCGTCTTGAACTATCAATCCCTGAGGTACCGCAATCATTCTTCTCTCCAGTTGTTAAGTTTCTTTTCCCTCTCCTCTTGTATGTTTCAAATACTTATTCTGTATAAGTTTGGTTGGTGGTGGTGCAGACATTGGATCTCCTAGACCTG CTTCATATAAAACCCCCTTCTTTCTCTCTCACAAATTCTGGATCCCTAAATCTAGGGCTTCTTACTCTCAGGGATCTTCATTCATTCATTGATATCACAATCAAGTGCTGCAATATGGATGGTTCATATAGCTTTTGGCAATTGGGTGATGAGCTGCGAGGTCAGACAAAAGTCTCTGAAGATCATAAATGGTTATGGGCTGCATCTAAACTGGCTGAGCAGACCAGATCAAAGGGGGAGCGCATGAATAACCTTGATTTTTCAAAGAGCACTCTTGATGCAAGGCCAAGGGAAAAGTTTGGTTTTCAGGAAGATAACAAATTTGAGAGTTTCAACTTTAACATGTTGAGCTTGGATTCAAAAATGACCGACCCTGTTAACAAAAGTTCATTGAGGAATGGAATTTACAACATGAATGCAGTTTATGTGAAAAACAATACAAATGTTGCTGGAAATTTACCTGGTGCTAAGTTCAGTGGCAATGATTATATCAACAAAGATCTTACCAATTACAGTAGTACCAACAATAACGTTGGTGAAAATGCTAACTCCATCAATGCAATTGATAAAAGGTTCAAGACATTGCCAGCAACAGAGACACTGCCCAGAAATGAAGTTCTTGGTGGATACATCTTTGTCTGTAACAATGATACCATGCAAGAAGACTTAAAGAGGCAACTTTTTGGTAATTGTGCTTTTACCCTACATTTTTTTTCTGACCTTGCAGATAGCATGTACAAGTAA LHIKPPSFSLTNSGSLNLGLLTLRDLHSFIDITIKCCNMDGSYSFWQLGDELRGQTKVSEDHKWLWAASKLAEQTRSKGERMNNLDFSKSTLDARPREKFGFQEDNKFESFNFNMLSLDSKMTDPVNKSSLRNGIYNMNAVYVKNNTNVAGNLPGAKFSGNDYINKDLTNYSSTNNNVGENANSINAIDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGNCAFTLHFFSDLADSMYK Homology
BLAST of Cucsat.G15685.T16 vs. ExPASy Swiss-Prot
Match: Q8RXN8 (DCD domain-containing protein NRP OS=Arabidopsis thaliana OX=3702 GN=NRP PE=1 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 8.9e-19 Identity = 66/149 (44.30%), Postives = 85/149 (57.05%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy Swiss-Prot
Match: C6TAQ0 (DCD domain-containing protein NRP-B OS=Glycine max OX=3847 GN=NRP-B PE=2 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 2.9e-17 Identity = 78/225 (34.67%), Postives = 105/225 (46.67%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy Swiss-Prot
Match: P37707 (B2 protein OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 4.1e-16 Identity = 45/66 (68.18%), Postives = 51/66 (77.27%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy Swiss-Prot
Match: Q5JZR1 (DCD domain-containing protein NRP-A OS=Glycine max OX=3847 GN=NRP-A PE=2 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 4.6e-15 Identity = 76/247 (30.77%), Postives = 112/247 (45.34%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. NCBI nr
Match: XP_004145666.2 (uncharacterized protein LOC101215772 [Cucumis sativus] >KGN58174.1 hypothetical protein Csa_017566 [Cucumis sativus]) HSP 1 Score: 465 bits (1196), Expect = 1.07e-162 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. NCBI nr
Match: KAG6581097.1 (hypothetical protein SDJN03_21099, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 386 bits (991), Expect = 4.36e-132 Identity = 184/202 (91.09%), Postives = 197/202 (97.52%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. NCBI nr
Match: XP_008450102.1 (PREDICTED: B2 protein [Cucumis melo]) HSP 1 Score: 380 bits (976), Expect = 2.84e-130 Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. NCBI nr
Match: KAA0042911.1 (B2 protein [Cucumis melo var. makuwa] >TYK05313.1 B2 protein [Cucumis melo var. makuwa]) HSP 1 Score: 380 bits (976), Expect = 8.61e-130 Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. NCBI nr
Match: KAG7022663.1 (hypothetical protein SDJN02_16397, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 381 bits (978), Expect = 1.27e-129 Identity = 198/239 (82.85%), Postives = 211/239 (88.28%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy TrEMBL
Match: A0A0A0LB43 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G585860 PE=4 SV=1) HSP 1 Score: 465 bits (1196), Expect = 5.18e-163 Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy TrEMBL
Match: A0A1S3BP62 (B2 protein OS=Cucumis melo OX=3656 GN=LOC103491791 PE=4 SV=1) HSP 1 Score: 380 bits (976), Expect = 1.38e-130 Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy TrEMBL
Match: A0A5D3C009 (B2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001340 PE=4 SV=1) HSP 1 Score: 380 bits (976), Expect = 4.17e-130 Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy TrEMBL
Match: A0A6J1F9B6 (B2 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111442004 PE=4 SV=1) HSP 1 Score: 362 bits (930), Expect = 1.46e-123 Identity = 174/191 (91.10%), Postives = 186/191 (97.38%), Query Frame = 0
BLAST of Cucsat.G15685.T16 vs. ExPASy TrEMBL
Match: A0A6J1J1D1 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111482521 PE=4 SV=1) HSP 1 Score: 362 bits (929), Expect = 2.08e-123 Identity = 173/191 (90.58%), Postives = 185/191 (96.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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