Cucsat.G15674.T6 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAATGGAAGAGATAATGGAAGTTGGGAGCCAATGAAATCAAAACTCGCACGTATCTGAATCTTCTTCTTCTTCTTCTTCTTTTCTTTTTTATTTATTTATTATTAATAAAAATAAAAGCATAGAGAGAAAAAAACCAAAATGAGAAGAAGGATTAATGGTATATTGTGATGGGAGCAAAATCTAGGGTTCTTTCTCATTTCAAGATCTCTTCCCGCGATTCTTTAACCTCTCTCTCTTCTCTTTAACAATTTCTCCATTTAAAAGATAAAGCTTCTGATTCCTTACATCTCTCTCCGCATCTTCTTTACTCAGGTATTCCCTTCCATCTACTCCTTTTTTTCTTTTTCTTTTTTTCTCTCTTTTCCTTTCTCATGATCTATGGTGATGATGCATCTTGTTTATCAATTTCAATTGTATTTAAATCCATTCATCCTCATCAATCTCTTTTCCATTTTCCTTCTTCCGGTTTATTTACTTTCATTCCGTGTTATTCCTGAGTCAATTACGGTCTCAGCTTGTTTTCAGATGCGCTCTTTTTTTCCTTCTTTCTTCGGAATTCCCGGTTTCAGGTTTTGCTGTTTTTAAATTCATCTTGGTAGTGGTAGATTGCTTGGGGTGTTTTGTGTGGGAGGATTTTTCGGGGGAAGCTGCTACTGGCGATGAAGCTGGGTCTTTACTGGTAGACCTCAAATGCCGGACGAAGATTTGATCGAGCTTAAGTTCCGACTTTATGATGGATCGGATATCGGTCCATTTCGTTATTCCCCAACTTCAACTATAGCCATGGTTAAGGAGAGGATTGTTGCAGAATGGCCTAAAGGTCAGTGAATTGGATCATGTTATTAGTTCCATTTTGCTCTTGTGGTGTTTCAGTTTCAATTTGTTGAATTACTTTTGTATGCAATGCAACTGTCGAATCGTAAGCACGTATGCTGTATACTCTGCAGTAATTGTGTCTAATCCAACCTTGCTCTTTCAAAATTTGACTTCCTTGACTTGGGTACCCTCTAGCTCAACTTAGAAGTTGAACACTATCATACGCGAGAAAGACAACTTGTGACTTTTAATAAGAAATAACTGATTTCCCCCCAGCTATGAAGAAATACCGAAAGGTATGGATTCTGCCAGGAGTCTTGTATAGTATGTAAACTCTTCTCATGATGATACACAGAACTAAAGGTTAATCATTACCATCTTTGTCTTTGTTGAACATGCTGGAAATTTTTTTTTTACATTTTTTGGGGGTCTGTTCTGTTATTGGTTACATAAGAGTGAATACAGTGTCCAGCTTTATCTTCATGTCTTCCTTTACGGCTGAGTGAGTTGAAGTGCTATTGCTTCCAATTACTTTGCATCTCTCTATCTCGCTTCATTCTCCCATCCATAGTGAAACTAACTACTGTAAATGTTTTTAATACTTTTTAGATAAGAAAGTTATACCCAAGGCAGCAAATGACGTAAAACTGATCAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTTGGCGATCTTCCTAAAGGAGTTATTACTATGCATGTCGTGGTGCAGCCAACTATAGCAAAAGCAAAATCAGGTAGCCATCCTTTAAGTTTTATATGTGCTTCTGCATTACCTTTAATACTCAGCCATTCTACTGATAACTACGTGATGTTATATATTATCTTCGTGTCAGTCATCTAGTATTTGTATGCTCCATTTATTTGGACTTTA ATGCCGGACGAAGATTTGATCGAGCTTAAGTTCCGACTTTATGATGGATCGGATATCGGTCCATTTCGTTATTCCCCAACTTCAACTATAGCCATGGTTAAGGAGAGGATTGTTGCAGAATGGCCTAAAGATAAGAAAGTTATACCCAAGGCAGCAAATGACGTAAAACTGATCAATGCTGGCAAGATTTTAGAAAACAACAAGACTGTTGGTCAATGTCGAGTGCCTTTTGGCGATCTTCCTAAAGGAGTTATTACTATGCATGTCGTGGTGCAGCCAACTATAGCAAAAGCAAAATCAGGTAGCCATCCTTTAAGTTTTATATGTGCTTCTGCATTACCTTTAATACTCAGCCATTCTACTGATAACTACGTGATGTTATATATTATCTTCGTGTCAGTCATCTAG MPDEDLIELKFRLYDGSDIGPFRYSPTSTIAMVKERIVAEWPKDKKVIPKAANDVKLINAGKILENNKTVGQCRVPFGDLPKGVITMHVVVQPTIAKAKSGSHPLSFICASALPLILSHSTDNYVMLYIIFVSVI Homology
BLAST of Cucsat.G15674.T6 vs. ExPASy Swiss-Prot
Match: Q9LSD8 (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 5.9e-41 Identity = 74/99 (74.75%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy Swiss-Prot
Match: Q9SW27 (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 6.8e-37 Identity = 70/117 (59.83%), Postives = 92/117 (78.63%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy Swiss-Prot
Match: Q7XRU4 (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2) HSP 1 Score: 137.1 bits (344), Expect = 1.5e-31 Identity = 61/97 (62.89%), Postives = 80/97 (82.47%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 8.8e-29 Identity = 54/87 (62.07%), Postives = 75/87 (86.21%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy Swiss-Prot
Match: Q9SH14 (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MUB5 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 9.8e-28 Identity = 60/101 (59.41%), Postives = 77/101 (76.24%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. NCBI nr
Match: KAA0060276.1 (membrane-anchored ubiquitin-fold protein 4 [Cucumis melo var. makuwa] >TYK23039.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis melo var. makuwa]) HSP 1 Score: 244 bits (623), Expect = 4.94e-81 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. NCBI nr
Match: XP_004148006.2 (membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_011651547.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737935.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737936.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >XP_031737937.1 membrane-anchored ubiquitin-fold protein 4 [Cucumis sativus] >KGN58155.1 hypothetical protein Csa_017641 [Cucumis sativus]) HSP 1 Score: 203 bits (516), Expect = 6.42e-65 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. NCBI nr
Match: XP_038905050.1 (membrane-anchored ubiquitin-fold protein 4-like [Benincasa hispida]) HSP 1 Score: 202 bits (513), Expect = 1.84e-64 Identity = 99/100 (99.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. NCBI nr
Match: XP_008450137.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Cucumis melo] >XP_008450138.1 PREDICTED: membrane-anchored ubiquitin-fold protein 4 [Cucumis melo]) HSP 1 Score: 199 bits (505), Expect = 3.05e-63 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. NCBI nr
Match: XP_022156522.1 (membrane-anchored ubiquitin-fold protein 4-like [Momordica charantia]) HSP 1 Score: 197 bits (501), Expect = 1.24e-62 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy TrEMBL
Match: A0A5A7V1C2 (Membrane-anchored ubiquitin-fold protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3819G00060 PE=4 SV=1) HSP 1 Score: 244 bits (623), Expect = 2.39e-81 Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy TrEMBL
Match: A0A0A0L887 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_3G563280 PE=4 SV=1) HSP 1 Score: 203 bits (516), Expect = 3.11e-65 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy TrEMBL
Match: A0A1S3BNL5 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103491812 PE=4 SV=1) HSP 1 Score: 199 bits (505), Expect = 1.48e-63 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy TrEMBL
Match: A0A6J1DS77 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111023404 PE=4 SV=1) HSP 1 Score: 197 bits (501), Expect = 6.01e-63 Identity = 94/100 (94.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Cucsat.G15674.T6 vs. ExPASy TrEMBL
Match: A0A6J1IZ93 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111482030 PE=4 SV=1) HSP 1 Score: 194 bits (493), Expect = 9.96e-62 Identity = 94/100 (94.00%), Postives = 97/100 (97.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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