Cucsat.G15672.T2 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15672.T2
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAC domain-containing protein
Location	ctg2009: 5421007 .. 5423174 (+)
RNA-Seq Expression	Cucsat.G15672.T2
Synteny	Cucsat.G15672.T2

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAAAAGAGAAAAAGAAAGAGAAAAAGAAAAGAGTTTTGGGATTCCGAATTGTAGTGGGACTAAGGATTTCCAATTTCTTACATTCCATAAAACGCAAGGAAAGATCCTTGTCTTTCTCTTACGCACCGCACCACACCACACCACACCACAACACTCCCTTCTTCCTTTCTTTTCTATCTTCCTTCTCCTCCTTCCTAATTCCTGATTCCCAATTCCTATTTCTATTCCCCTTCATCTTCACTTTTTTTATTTAAATCAATCCCCACATGGCTTCTTTCTTCTCCATTCATATTTCTCTATCTCTTTGAGACTTCTTCTCACCCATTTCCTACCATATCATTCTTTTCCCCTATGGACAACATTTCAACCTTTGTCCTCAATGGAGGATCCATCAGATTGCCTGTTGGATATCGATTTTGCCCTACAGATCAGGAGTTGGTCTCCCATTACCTGAAGAGGAAGGTCTTTCATTTGCCACTTCCTGCTTCTATTATTCCTGACGTCGATATCTTCCTCACAGATCCATGGGCTTTGCCAGGTTTCTTCTATTTCTCTACAAAACTTATCATACACTTTCTTATTATCTGGATTTTGATGGGATTCTTTGTTGTTGTTCTTGCTGTTTTTGTTTCTTGGTTAGGGGATTTGAAAGAAAAGAGATTCTTTTTCAGCAAACAGAAGAGTTTCTTTAGGAGGAGTGCTGGGTGTGGGATATGGAAGTCTATTGGGAAAGAGAAGTTGATATTAAGCCAAGAGCCGATGAACCAGTTGGTTGGTTTTAGGAAAACTTTGGTTTTTTCTGAATCTAAGTTTTGTGAGAGAACAAGTGCAACTCGGTGGGTCATGCATGAATATCGATTGCCTCCCTCTGCATCTCCAACAACTCCCAACTCAACACAGGTAAAGACAAGTTTGACCGTCGACTTGTACTAAATTACCAATACTACCCTTTTTTTAAAATATATTTACAATGAACTGATTCCTTTTTTAATTCTGTGAGTTTGTTTTTCTTTTGGTTCTGGACTAATTGACTACAAAATAAAAGCAGATTGAAATGGGGGATTGGGCTGTGTACAGCTTGTTTCAAAAGAGAAGAAGGCCTAAGAGGCAAGGGGTGGAAGAGAAGCAGAGATTGAGTGTAGCCAAGGAGGCAAGCGTATTGGATTTGAGGGTGGAGGATGGTTGGGAATTTCCACAGCCTTCTTCGTCAAGTTCAAGTGGAGTCACTGAAGTTTCTTCAAATGCTACAGATCAAGAAGAGAGCAGCAGTAGTTTAGGCTTAGGCTTAGGCTTTTCTTCATATTTTTCTCAAGCTCACGTGAGAGGGGTGTGACTTAGAGATACCCCTCTTCTCTTCAGCAGCTCAACGTTTGATTTGTTTTGTTCTGTTTTGTTTTGTTTTGGGTTGCTCTGGCTCTGATTAAGTAACGACAATGAGTCAAAAAGAGAAGAACCAAAAGGAAAAAAAGGCAAATTTAACTTGGGGGAAAGCCAAAAGAGAAAGAAAGAAAGATAGATGTCTTTTTTACATTTCCACCTTTTCAATGCAATTTGAGTTTCCCACCTTTTTGTGTGCCCTGGCGATAATTCTACCAAAACTCGGTTTTCGAGATAATCATGAGGGTGGGGGAGAAGGGAAAAAAGTAGCACCTTTTCTATTTCTTCTTTCTTTTTGGTATTTTAGCTGACTATAAAAAAAAGCCAGAAGGCCAAAACTATGGGGCAAATGAGACAATCTACAACTCGTCCATAATTATGAAAGATAATGACAAACTTAAGCATCCATTAGAGAGGGCGTAGTGGTATTTTGGTATCCAATTTAATAGATAATTAGTGGAGAGTGAGGAGCCTTCATGTGAGGCTATTCGTAAAGGCATCTTTGGCATATGAATTTGATACCCCATCACTAGTTTTAATATCTTTGCAAACCCTCGAATCTCCACGACTTTCTTGATTTTAGATTTTTATTGATTTTTTTAAGAGTGGGAGAGAGAGAGATTCTCTCATCTTCAATAGCTGTAGAGGTATAAATTATTAGATTTGGGTTGGATATGTTTTCTCCTAAAGAATGGGGTTTGGTCGAGAGGGGATGGCTGAGCAAGATTTTAAAATAAAGTAATTGTATTTCTTTTATTGAGGGAAAATGTAAATTTGAAAGCTTTGAG

Coding sequence (CDS)

ATGGACAACATTTCAACCTTTGTCCTCAATGGAGGATCCATCAGATTGCCTGTTGGATATCGATTTTGCCCTACAGATCAGGAGTTGGTCTCCCATTACCTGAAGAGGAAGGTCTTTCATTTGCCACTTCCTGCTTCTATTATTCCTGACGTCGATATCTTCCTCACAGATCCATGGGCTTTGCCAGGGGATTTGAAAGAAAAGAGATTCTTTTTCAGCAAACAGAAGAGTTTCTTTAGGAGGAGTGCTGGGTGTGGGATATGGAAGTCTATTGGGAAAGAGAAGTTGATATTAAGCCAAGAGCCGATGAACCAGTTGGTTGGTTTTAGGAAAACTTTGGTTTTTTCTGAATCTAAGTTTTGTGAGAGAACAAGTGCAACTCGGTGGGTCATGCATGAATATCGATTGCCTCCCTCTGCATCTCCAACAACTCCCAACTCAACACAGCAGATTGAAATGGGGGATTGGGCTGTGTACAGCTTGTTTCAAAAGAGAAGAAGGCCTAAGAGGCAAGGGGTGGAAGAGAAGCAGAGATTGAGTGTAGCCAAGGAGGCAAGCGTATTGGATTTGAGGGTGGAGGATGGTTGGGAATTTCCACAGCCTTCTTCGTCAAGTTCAAGTGGAGTCACTGAAGTTTCTTCAAATGCTACAGATCAAGAAGAGAGCAGCAGTAGTTTAGGCTTAGGCTTAGGCTTTTCTTCATATTTTTCTCAAGCTCACGTGAGAGGGGTGTGA

Protein sequence

MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWALPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKFCERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLSVAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAHVRGV

Homology

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot
Match: Q9FY93 (NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-32
Identity = 76/172 (44.19%), Postives = 110/172 (63.95%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDN+   ++  G +RLP G+RF PTD+ELV  YLKRKV   PLPASIIP+ D+   DPW 
Sbjct: 1   MDNVK--LVKNGVLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFDVCRADPWD 60

Query: 61  LPGDLKEKRFFFSKQKSFF------RRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLV 120
           LPG+L+++R+FFS +++ +       R+ G G WK+ G +K +++    NQ+VG +KTLV
Sbjct: 61  LPGNLEKERYFFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRG-NQIVGLKKTLV 120

Query: 121 FSESKFCERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRR 167
           F + K     S T W+MHEYRL  S+ P++   TQ     +W +  +F K+R
Sbjct: 121 FYKGK-PPHGSRTDWIMHEYRL-SSSPPSSMGPTQ-----NWVLCRIFLKKR 162

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot
Match: O22798 (NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-28
Identity = 72/183 (39.34%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 8   VLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWALPGDLKE 67
           + N G +RLP G+RF PTD+ELV  YL+RKV  LPLPAS+IP+ D+  +DPW LPGD + 
Sbjct: 7   IKNRGVLRLPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETDVCKSDPWDLPGDCES 66

Query: 68  KRFFFSKQKSFF------RRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKFC 127
           + +FFS +++ +       RS G G WK+ G +K I  ++    +VG +KTLVF + K  
Sbjct: 67  EMYFFSTREAKYPNGNRSNRSTGSGYWKATGLDKQIGKKK---LVVGMKKTLVFYKGKPP 126

Query: 128 ERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLSV 185
             T  T WV+HEYRL  S   +           +W +  +F K+R       +E ++  V
Sbjct: 127 NGT-RTNWVLHEYRLVDSQQDSLYGQNM-----NWVLCRVFLKKRSNSNSKRKEDEKEEV 180

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot
Match: Q84TD6 (NAC transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=NAC047 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-23
Identity = 62/145 (42.76%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 16  LPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWALPGDL----KEKRFF 75
           LP G+RF PTD+EL+ HYL++KV   P+P SII DVDI+ +DPW LP       KE  FF
Sbjct: 10  LPPGFRFHPTDEELILHYLRKKVSSSPVPLSIIADVDIYKSDPWDLPAKAPFGEKEWYFF 69

Query: 76  FSKQKSF-----FRRSAGCGIWKSIGKEKLIL--SQEPMNQLVGFRKTLVFSESKFCERT 135
             + + +       R+A  G WK+ G +KLI   + E  ++ +G +K LVF   K   + 
Sbjct: 70  SPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHENIGIKKALVFYRGK-PPKG 129

Query: 136 SATRWVMHEYRLPPSASPTTPNSTQ 150
             T W+MHEYRL  S SP   NS++
Sbjct: 130 VKTNWIMHEYRLADSLSPKRINSSR 153

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 61/172 (35.47%), Postives = 94/172 (54.65%), Query Frame = 0


Query: 11  GGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWALPGDL---KE 70
           G +  LP G+RF PTD+ELV HYLK+K   +PLP +II +VD++  DPW LP      ++
Sbjct: 23  GSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELPEKATFGEQ 82

Query: 71  KRFFFSKQKSFF------RRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKFC 130
           + +FFS +   +       R+A  G WK+ G +K IL+     + VG +K LVF   K  
Sbjct: 83  EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGK-P 142

Query: 131 ERTSATRWVMHEYRLPPSASPTTP---------NSTQQIEMGDWAVYSLFQK 165
            +   T W+MHEYRL  ++S  T          + +  + + DW +  +++K
Sbjct: 143 PKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKK 193

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.5e-23
Identity = 61/164 (37.20%), Postives = 90/164 (54.88%), Query Frame = 0


Query: 16  LPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWALPGDL---KEKRFFF 75
           LP G+RF PTD+ELV HYLKRK    PLP +II +VD++  DPW LP      +++ +FF
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELPAKASFGEQEWYFF 76

Query: 76  SKQKSFF------RRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKFCERTSA 135
           S +   +       R+A  G WK+ G +K +L+ +  NQ VG +K LVF   K   +   
Sbjct: 77  SPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDG-NQKVGVKKALVFYSGK-PPKGVK 136

Query: 136 TRWVMHEYRLPPSASPTTP------NSTQQIEMGDWAVYSLFQK 165
           + W+MHEYRL  +     P      N    + + DW +  +++K
Sbjct: 137 SDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKK 178

[Close]

BLAST of Cucsat.G15672.T2 vs. NCBI nr
Match: XP_011651545.1 (NAC domain-containing protein 83 isoform X1 [Cucumis sativus] >KAE8650763.1 hypothetical protein Csa_017552 [Cucumis sativus])

HSP 1 Score: 490 bits (1261), Expect = 1.13e-174
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA
Sbjct: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF
Sbjct: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS
Sbjct: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240
           VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH
Sbjct: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240

Query: 241 VRGV 244
           VRGV
Sbjct: 241 VRGV 244

[Close]

BLAST of Cucsat.G15672.T2 vs. NCBI nr
Match: XP_004148002.1 (NAC domain-containing protein 83 isoform X2 [Cucumis sativus])

HSP 1 Score: 483 bits (1244), Expect = 4.27e-172
Identity = 243/244 (99.59%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA
Sbjct: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF
Sbjct: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CERTSATRWVMHEYRLPPSASPTTPNSTQ IEMGDWAVYSLFQKRRRPKRQGVEEKQRLS
Sbjct: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQ-IEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240
           VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH
Sbjct: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240

Query: 241 VRGV 244
           VRGV
Sbjct: 241 VRGV 243

[Close]

BLAST of Cucsat.G15672.T2 vs. NCBI nr
Match: XP_008450147.1 (PREDICTED: NAC domain-containing protein 83 isoform X1 [Cucumis melo])

HSP 1 Score: 442 bits (1136), Expect = 1.33e-155
Identity = 226/246 (91.87%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQQIE+GDWAVYSLFQKRRRPKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQQIEVGDWAVYSLFQKRRRPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
            A+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 EAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 245

[Close]

BLAST of Cucsat.G15672.T2 vs. NCBI nr
Match: XP_008450148.1 (PREDICTED: NAC domain-containing protein 83 isoform X2 [Cucumis melo])

HSP 1 Score: 435 bits (1119), Expect = 5.02e-153
Identity = 225/246 (91.46%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQ IE+GDWAVYSLFQKRRRPKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQ-IEVGDWAVYSLFQKRRRPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
            A+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 EAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 244

[Close]

BLAST of Cucsat.G15672.T2 vs. NCBI nr
Match: KAA0060306.1 (NAC domain-containing protein 83 isoform X2 [Cucumis melo var. makuwa] >TYK22055.1 NAC domain-containing protein 83 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 434 bits (1117), Expect = 1.01e-152
Identity = 224/246 (91.06%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQ IE+GDWAVY LFQKRR+PKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQ-IEVGDWAVYCLFQKRRKPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
           VA+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 VAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 244

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL
Match: A0A0A0LDI3 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G560210 PE=4 SV=1)

HSP 1 Score: 483 bits (1244), Expect = 2.07e-172
Identity = 243/244 (99.59%), Postives = 243/244 (99.59%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA
Sbjct: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF
Sbjct: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CERTSATRWVMHEYRLPPSASPTTPNSTQ IEMGDWAVYSLFQKRRRPKRQGVEEKQRLS
Sbjct: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQ-IEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240
           VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH
Sbjct: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLGFSSYFSQAH 240

Query: 241 VRGV 244
           VRGV
Sbjct: 241 VRGV 243

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL
Match: A0A1S3BP91 (NAC domain-containing protein 83 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491822 PE=4 SV=1)

HSP 1 Score: 442 bits (1136), Expect = 6.46e-156
Identity = 226/246 (91.87%), Postives = 230/246 (93.50%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQQIE+GDWAVYSLFQKRRRPKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQQIEVGDWAVYSLFQKRRRPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
            A+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 EAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 245

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL
Match: A0A1S3BPK5 (NAC domain-containing protein 83 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491822 PE=4 SV=1)

HSP 1 Score: 435 bits (1119), Expect = 2.43e-153
Identity = 225/246 (91.46%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQ IE+GDWAVYSLFQKRRRPKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQ-IEVGDWAVYSLFQKRRRPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
            A+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 EAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 244

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL
Match: A0A5D3DET8 (NAC domain-containing protein 83 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00330 PE=4 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 4.90e-153
Identity = 224/246 (91.06%), Postives = 229/246 (93.09%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDNIS FVLNGGSIRLPVGYRFCPTDQELV+HYLKRKVFHLPLPASIIPD DIFLTDPWA
Sbjct: 1   MDNISPFVLNGGSIRLPVGYRFCPTDQELVAHYLKRKVFHLPLPASIIPDFDIFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGD KEKRFFFSKQKSF RRSAGCGIWKSIGKEKLILS  PMNQLVG RKTLVFSESKF
Sbjct: 61  LPGDSKEKRFFFSKQKSFSRRSAGCGIWKSIGKEKLILSPGPMNQLVGSRKTLVFSESKF 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
           CE  SATRWVMHEYRLP SASPTTPNSTQ IE+GDWAVY LFQKRR+PKRQGVEEKQRL 
Sbjct: 121 CETKSATRWVMHEYRLPRSASPTTPNSTQ-IEVGDWAVYCLFQKRRKPKRQGVEEKQRLR 180

Query: 181 VAKEASVLDLRVEDGWEFPQPSSSSSSGVTEVSSNATDQEESSSSLGLGLG--FSSYFSQ 240
           VA+EAS+LDLRVEDGWEFPQPSSSSSSGVTEVSSNA DQEE SSSLGLGLG  FSSYFSQ
Sbjct: 181 VAEEASILDLRVEDGWEFPQPSSSSSSGVTEVSSNA-DQEEHSSSLGLGLGLGFSSYFSQ 240

Query: 241 AHVRGV 244
           AHVRGV
Sbjct: 241 AHVRGV 244

[Close]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL
Match: A0A6J1DQG0 (NAC domain-containing protein 83 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023382 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 1.79e-117
Identity = 189/249 (75.90%), Postives = 202/249 (81.12%), Query Frame = 0


Query: 1   MDNISTFVLNGGSIRLPVGYRFCPTDQELVSHYLKRKVFHLPLPASIIPDVDIFLTDPWA 60
           MDN      NGG IRLPVGYRFCPTD+EL+ HYLKRKVFHLPLPAS+IP  D+FLTDPWA
Sbjct: 1   MDNT-----NGG-IRLPVGYRFCPTDEELLQHYLKRKVFHLPLPASVIPHFDVFLTDPWA 60

Query: 61  LPGDLKEKRFFFSKQKSFFRRSAGCGIWKSIGKEKLILSQEPMNQLVGFRKTLVFSESKF 120
           LPGDLKEKRFFF+KQKSF +RSAG GIWKSIGKEK ILSQ   N L+G +K+LVFSESK 
Sbjct: 61  LPGDLKEKRFFFTKQKSFLKRSAGTGIWKSIGKEKFILSQGT-NHLLGLKKSLVFSESKV 120

Query: 121 CERTSATRWVMHEYRLPPSASPTTPNSTQQIEMGDWAVYSLFQKRRRPKRQGVEEKQRLS 180
            ERT   RWVMHEYRL  + S TTPNSTQQIE GDWAVY LFQKRRRPK+QGVEEKQRL+
Sbjct: 121 SERTRPARWVMHEYRL--ARSGTTPNSTQQIEKGDWAVYCLFQKRRRPKKQGVEEKQRLA 180

Query: 181 VAKEASVLDLRVED-GWEFPQPSSSSSSGVTEVSSNAT---DQEESSSS-LGLGLGFSSY 240
           VA +ASVLDL VED GWEFPQP SS SSGVTEVSSN T   DQEESS S  G G G  SY
Sbjct: 181 VA-QASVLDLTVEDDGWEFPQPCSSCSSGVTEVSSNGTESMDQEESSGSGSGYGFGLPSY 239

Query: 241 FSQAHVRGV 244
            S AHVRGV
Sbjct: 241 SSVAHVRGV 239

The following BLAST results are available for this feature:

BLAST of Cucsat.G15672.T2 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FY93	1.8e-32	44.19	NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 ...	[more]
O22798	2.7e-28	39.34	NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 ...	[more]
Q84TD6	1.2e-23	42.76	NAC transcription factor 47 OS=Arabidopsis thaliana OX=3702 GN=NAC047 PE=2 SV=1	[more]
A0SPJ6	1.5e-23	35.47	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]
Q9LD44	4.5e-23	37.20	NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1	[more]

BLAST of Cucsat.G15672.T2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651545.1	1.13e-174	100.00	NAC domain-containing protein 83 isoform X1 [Cucumis sativus] >KAE8650763.1 hypo...	[more]
XP_004148002.1	4.27e-172	99.59	NAC domain-containing protein 83 isoform X2 [Cucumis sativus]	[more]
XP_008450147.1	1.33e-155	91.87	PREDICTED: NAC domain-containing protein 83 isoform X1 [Cucumis melo]	[more]
XP_008450148.1	5.02e-153	91.46	PREDICTED: NAC domain-containing protein 83 isoform X2 [Cucumis melo]	[more]
KAA0060306.1	1.01e-152	91.06	NAC domain-containing protein 83 isoform X2 [Cucumis melo var. makuwa] >TYK22055...	[more]

BLAST of Cucsat.G15672.T2 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LDI3	2.07e-172	99.59	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G560210 PE=4 SV...	[more]
A0A1S3BP91	6.46e-156	91.87	NAC domain-containing protein 83 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A1S3BPK5	2.43e-153	91.46	NAC domain-containing protein 83 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491...	[more]
A0A5D3DET8	4.90e-153	91.06	NAC domain-containing protein 83 isoform X2 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1DQG0	1.79e-117	75.90	NAC domain-containing protein 83 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 17..136 e-value: 6.9E-28 score: 98.1
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 16..164 score: 39.761608
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 25..169 e-value: 5.1E-34 score: 119.3
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 11..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..227
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 16..172
None	No IPR available	PANTHER	PTHR31989:SF20	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 16..172

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15672	Cucsat.G15672	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15672.T2.E1	Cucsat.G15672.T2.E1	exon
Cucsat.G15672.T2.E2	Cucsat.G15672.T2.E2	exon
Cucsat.G15672.T2.E3	Cucsat.G15672.T2.E3	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15672.T2.C1	Cucsat.G15672.T2.C1	CDS
Cucsat.G15672.T2.C2	Cucsat.G15672.T2.C2	CDS
Cucsat.G15672.T2.C3	Cucsat.G15672.T2.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15672.T2	Cucsat.G15672.T2-protein	polypeptide

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding