Cucsat.G15653.T1 (mRNA) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GATAAAGGTACTATTTATGAGGTCATTAATAAGTGGGAAAAAAAGGAAAAGGAAAAGAGAAATAGAAAAGTGGGAAACCTAGCCTTCATAATCTTCTTCTTCCCCTTGCATAGGCCGGCCACCCCCTTTCTGTTCATTCTTCTTGGCCGGCGAGCCTCAGACGGCAAAGACCCCTATGAATTCACGTTGACACGAGCAGACACCCTCACGTTCAAGGTGTTACTCACGAACCCACTTCTCTCCGTCACTTCTGGCGAGCCGTGTTGGTGAAACCCACAAGTCATTTCTGCAATGGTAACGCGATTCTCGATAAAGCTCCATGGGTTTTATGGTCGTTGTGTAGCCAAGCCGATGTGACACCCATGAGACAGGAACCCACTTTGTACACCTTCCAATCAATGTCTCTCCGTCTCGACAGGTTTCAGTATTGACCCACACTTCGATTGACTTCAAATTGGTGTACTCATATTGTTTAAGGTTCAGATCTGCCAAGTTCCACGTTTTTGGATACCCGCCAGCAAGGTTTAGAGCCTCTTCGATAAGATTCGGTAAGAATTATTGCTCTAATTTTTTTTTTTTTTTGAATTGGATTGAAGTGTTTGAACAGTACTCTGAATTATTGGTACTTGTTTGTTGTTATGTTTGGGTAGATTTTGTGAGTAGTTGATTAAGGTTCAGCGTGGTTGATCACGTTTTGGACTAGTTTGAACTTGAATAAAGTGTCTTAGATCAGTCTTTCACTCGTGGAAGGTTGTTGGTTGTAGTATCGTACTAATTTGTAGTGGTTAATTAAGGTTTATGGTGAATTTTGGATTAGAACATTCTTGTCTGAAAACCTCTTGTTGTTGATTAAGGTTTTCGAAGTAGGTTCTAATCCTTAAACATGATGTTTATTGTTTAGGTTTTCTAAAGGATGTTCGTTCAAGGAAGCCAATTTTTTAATTGAGAATTATCGTATTGTTGATCGAGGTAAGTAGTTTTCACATCCTTTTCACAATTTAAATTTTGATAAAGATGTGTTTTGACTGTTGTGATTGGATAAATGGCTGATAGTGTTCTGGATATTTGAAAAGATACTTTGTACCATTTCAAACCCCTTGAATTTGTTTGGATGTTATTAATGTTTTCCTTCTTGAAAACATGTTTTATGTGATTTGAGAATCGACTGAAAGTTTTTTGTATATTTTTAGTTGATTTTGTTTTATTTAAGTATAGTGACTATTTCGAATGATACATGAAGATGTTTTGATTGATTTTGAATTGAATGTGTTTTTTGTTTTTGTTTTGGTTACATCTATGAACTTGTTAAAGATTTAAATAGTTTTATTTGATGAGTTCTGTTGTTGAAATTGCTATTTGAAACTGCATGTTTTGTTTCAAATATTTCTGATTGATTAGACAGGAATATTCGGATATGCTAGTTTTTGTGTTTAGAGATTGTTTGGTATTTTGTTATAGCCAAATTTGGAATTGACAATTTCTGTTCCAACTGAATTTATCTGTGAGAAGACACGTTTTTGTGGTTTGACATTCTTTCGAGTGAAGATTCTTGCGTGATGCACTCACATAGCCTCACATTTAAAGTAATTTCTGTTCTGGTCAATGTTTCTGCAATTTTCGTTCGTTAGTTGACCTTTCTGACCGGTGTTATTGACATACATTTATGCTGGGCTACTTCAACTATGCATCTTTCTTATTTTGTACTTAAAAGTTTTGAACGACTGAAAGCTTTATAATACTATTAACTGATTGAGAGTATTGACTGATTTAAAGCTTTGTATTTGAAAGTTTTGAACAATTTGTGTTTTTAAAAGTATGAAAGTGTTGTTTATTAAAGGTGCTGAAAGTTTATTTGAGCGTTTTGGTTTTGTTGAAAGACTGAAAGTTTAGTTTTGAAGTTTTATGATAGACTACTTGTGATACACGCATATGACAGGAGGGGTAAAAAGGGAAAATAAATAGTTATGAGAGTCTAGTGGGACAAAAAAACGGGTAGTTGGTATATGTAGTGTTTTGAACTTTTGGTGAGGGTTATCTGGTTTTATCCGTTGTGTGTTATTTCCTCTCTAGTGCGGGAGGAAGATTGATTTGTACTCTTCTTTTTGACTTTTTAATTTCAATAAGATTCTCTTCTTGATTCCTATCATTTTAGCTGCTTGAAAGATCTTGATTTTGAAGTATCTATTGTTGCAAAGTCTTGACCAAAAGTTTTGTAATGATTTGTATTTTTATTTCCAAAAGTTTTGAAAGCAGTTGAATTTCAAACCTTGATATGGGAACTGCTTATTGAGATTATTTTTGTACTCATATTTGTTTTTCCAAAATGCTTTCAGATGAAGGATCATGTGAAAGTTTTGAAGAAAGTGAAGTTTGGCATTCAGGCATAGGTCATCAAAGGATGTTTATGTTAGGATTTGATAGTTTGACTCAGGACGTCTTTGTAATAAGTTGCTTCTGCTGATTTGTGTAAGTTGTAAAACTTATAGTTATTAAGTTTTCTGCATTTTTTATAATAGCAGTATTAGAAAATACGGGCTATTACATAAAATTTGGTATCTAATCTATTGACAACCGATGCCAGATTAATTAAATAGTTCTCAGATGCTCATGAAGGAATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAATCCGAAGTTGATTGCTACTCTCTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCCGAGCCCCAAAAATGATGCTGGATCTGCAGTCTAGCGGGAGTCACAGTGTGGATGGTAACTGGAGAGCTCTTGGAAAACTGCTTATTTATTGCTCAGGATGTAAGAAGGGTGGTCTGTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGATCAAGGGGAAGAGGGGGATATTGGTTTCTTCAGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAAAGAGAGGAGCAGAGCTTCATCCAACGGAGGTGTGCCCTTATTGTAAAGCCAAGCTATGGAGCATGCTACAAGCTAAAATGATCCCACAAAGTGCTAGCTGTAGATTGGGTGCTTATGAGGATTGTATTGACTACTATGTCTGCCTGAATGGACATATGCTTGGTATTTGCACTCTGTTACCTTTGTCAGATTCTGAGGAGACATCTGAGTTGGAGTGATAACTATGATCTACAACCTTACAGCTCAGAAAAAGGTAACTAAACACATCTAACGTGTGCATGTTTCTCTAGAGAATCTTGAATCGATTTCAAATATGAGCAACCAAACTGCTCTCAAGTTTTTGAGTCAAATACATTTTGTTTAAATATTTGTTATGTTTTTCCTTCTGCAACCACGCTGAAGCAAGTGTCGTAATTATATGGTTATATGGTTAGATTTGTTGAATCCCAACCAACAATAACCTGAGTATGTAGTGGCAAAACTACTTCCAAGTACCTCCTATTGGTTTTCCATTGGAGGAACTTGGAAATTTTATCTGATGTGTGGAATGGTTTCTTTTACAAGCCTTTGGTGTCTTTTACATGCACCAGAAGGAAGAAAGGTACCAGGGGAGTTGAATTATGCTACGAACCAAGGTAGTAATGAAATGCCTTTATCCCACATTTTAACCAATGTGGCATTTAAGTTGCTTGACTCTCCAAGATGATTAAGTACCTAACACTAGTATCAAATCTAGTTGTTGACATTCTAGAGTGGAACCGGCGGAGGGTTCTAATCAGTGTGGCCGAGTGAAGTGTTGCTGGAGTAGCTATAGGATGTTAGTTTTTCGAAAAGGGGGTATTGTTAGGAATCAAGGTAGTATGGGATGCCTTTGTCCCATAATGGTTAGAATGGAAACCATCATGAGTTGACCTAGTGGTAAGAAAAGGAGATATAGTCTTAATAACTAATTAAGACGTTATGGGTTCAATACGTGGTGATTACCTACTTAGGAATTAATTTCTTACTAGTTACCTTGACACCCAAATGTTGTAGGGTTAGATAGGTTGTCCTGTGAGATTGGGCAGGTGCGCGTAAGCTGGTCCGGACACTCATGGATATAAAAAAAATATTAGTTGGAATGGGATGACCAATGTGGTACTTTAAGTGGCTTGGCTCTCCAACCCCAATAGCTAACTTTTGGGGTGTGGTTCTCCAGGGTGCTTAAGTATCTAACAAATTAGTACCTAAGAAGGTGTGATACTGTTTTCGGGTTTTTGGTGTGAGTGAGAATGCACAAGAGATGGCTTGTTGTTAGTGCTGCCCCAGTGAAATTGCAAATAAAAGACAATAAAATGGAGAGCTGGGGGGATGGGGATGTGCCCATGGGGTTTATACAAGTATCTTTGCACTAAATTGGAGTTGAAGTTTTTGCATTTTCCATTCCCTATCTTTTTCTTTTTTAAAAAATTATTTATGGGAACTATTGCATCTGAGAAGTCGTTCTTGAACAGGTTGATAAAAACGCCTGGAAAATCACTATTTGATCTCACGTAGATTGAATGAACTTTGCTTCAAGTGCGTTCAACTTCTGTTTCATGGAATCAAAGAAAGCAATCCCACCTCGTTTTCATCTGCATTCTGCAGCCTTAGCATTCTGGATAAATTTTTTGTGGGTGAAGTCTTAGGACAAGATTTTTGTCAAAAGGGAAAGAAAACAAAAACATCCTTTTTACCTGAAAAGGTTGTGTGTGAACCATGTAATTTTCATGTAAATTAACCCCTGATTCTATACTTGGTATTGTTGGAATGATTATGTACCCGTCTTATAAGGCTATGGATTGCTTCATATTTTCTTTAACTCTTAGAGATCTTCTTTTGAAATGGATACCTCTAAGCTAAAGCTTCTGTACCCTTATTGATTGTCCAGGGAATAGAAAGGCATCAATCTCCCCCTTGTTTGAATTGCATGGCTTGCCAAGCACCATATGTTGTCGGCTTTTAGGGATTGGACCAGTTCAAATAAAATGACTATTGATTACGGAGGTGTGCCCTTATTTGAATTTCCTTCTCCAATATCTTTATCCTTATATATTTCCTTTTTCTTTTCCTATCCCATGTGTCTATATTTTCGTATACAAATTTTCTTGACCTCATATACAAATTTTCATTATCTTCTCCAATATCATTAAACTTGATAGGGAGGCTGCGAAGTCATTTATCTAATAATATATTATCCTTTAAACTTTGTAGTAAACAATGGATACGGTAGACGGTCTAGCACACAGTGTAAATAAAGATCAAATTTTACT ATGATTCTGACAAAGCAATACCGGTGTGTGCATTCAGCAAGCTGCCAGTGCACCAAGGGGCACCTCAGTGAGGATGCAATATTCCTAGTATTCCAGCATTTGAACTGGAATCCGAAGTTGATTGCTACTCTCTCCTGTGCATGCAAATGGTTTGACGATCTTGCCAAGCGAGTGCTATGGAAGGAGTTTTGCAGGACCCGAGCCCCAAAAATGATGCTGGATCTGCAGTCTAGCGGGAGTCACAGTGTGGATGGTAACTGGAGAGCTCTTGGAAAACTGCTTATTTATTGCTCAGGATGTAAGAAGGGTGGTCTGTTCAATAACATTCAAATTCCTGGTCATTTTGTTTATAGAACCCGATTTTCTAGGACATCGGGCAAGAGTTTTCTTATGCCACAATGCAGAACAGATATTTTATATGTATCTGATCCTTGTGAACATCTCGATCAAGGGGAAGAGGGGGATATTGGTTTCTTCAGGGGTATTTTTAAGTCATTTTCAATGTCAAAGGTTAGGAAAATGCTGATAAAGAGAGGAGCAGAGCTTCATCCAACGGAGGTGTGCCCTTATTGTAAAGCCAAGCTATGGAGCATGCTACAAGCTAAAATGATCCCACAAAGTGCTAGCTGTAGATTGGGTGCTTATGAGGATTGTATTGACTACTATGTCTGCCTGAATGGACATATGCTTGGTATTTGCACTCTGTTACCTTTGTCAGATTCTGAGGAGACATCTGAGTTGGAGTGA MILTKQYRCVHSASCQCTKGHLSEDAIFLVFQHLNWNPKLIATLSCACKWFDDLAKRVLWKEFCRTRAPKMMLDLQSSGSHSVDGNWRALGKLLIYCSGCKKGGLFNNIQIPGHFVYRTRFSRTSGKSFLMPQCRTDILYVSDPCEHLDQGEEGDIGFFRGIFKSFSMSKVRKMLIKRGAELHPTEVCPYCKAKLWSMLQAKMIPQSASCRLGAYEDCIDYYVCLNGHMLGICTLLPLSDSEETSELE Homology
BLAST of Cucsat.G15653.T1 vs. ExPASy Swiss-Prot
Match: Q9FLZ8 (EID1-like F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EDL2 PE=1 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 3.3e-130 Identity = 209/249 (83.94%), Postives = 229/249 (91.97%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy Swiss-Prot
Match: Q9LF38 (EID1-like F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EDL1 PE=2 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-123 Identity = 196/244 (80.33%), Postives = 217/244 (88.93%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy Swiss-Prot
Match: Q93ZT5 (EID1-like F-box protein 3 OS=Arabidopsis thaliana OX=3702 GN=EDL3 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 4.2e-53 Identity = 94/223 (42.15%), Postives = 140/223 (62.78%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy Swiss-Prot
Match: Q8LEA8 (Phytochrome A-associated F-box protein OS=Arabidopsis thaliana OX=3702 GN=EID1 PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.6e-04 Identity = 28/99 (28.28%), Postives = 44/99 (44.44%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. NCBI nr
Match: XP_004149843.1 (EID1-like F-box protein 2 [Cucumis sativus] >XP_008450153.1 PREDICTED: EID1-like F-box protein 2 [Cucumis melo] >XP_011651519.1 EID1-like F-box protein 2 [Cucumis sativus] >XP_016900846.1 PREDICTED: EID1-like F-box protein 2 [Cucumis melo] >KAA0060320.1 EID1-like F-box protein 2 [Cucumis melo var. makuwa] >KGN58110.1 hypothetical protein Csa_017646 [Cucumis sativus] >TYK22070.1 EID1-like F-box protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 531 bits (1368), Expect = 7.45e-191 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. NCBI nr
Match: XP_038877395.1 (EID1-like F-box protein 2 [Benincasa hispida]) HSP 1 Score: 528 bits (1360), Expect = 1.24e-189 Identity = 246/248 (99.19%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. NCBI nr
Match: XP_022144516.1 (EID1-like F-box protein 2 [Momordica charantia]) HSP 1 Score: 524 bits (1350), Expect = 4.14e-188 Identity = 243/248 (97.98%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. NCBI nr
Match: XP_022949321.1 (EID1-like F-box protein 2 [Cucurbita moschata] >XP_022949322.1 EID1-like F-box protein 2 [Cucurbita moschata] >XP_022949323.1 EID1-like F-box protein 2 [Cucurbita moschata] >XP_023523725.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo] >XP_023523726.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo] >XP_023523728.1 EID1-like F-box protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 519 bits (1337), Expect = 3.98e-186 Identity = 241/248 (97.18%), Postives = 246/248 (99.19%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. NCBI nr
Match: XP_022997892.1 (EID1-like F-box protein 2 [Cucurbita maxima] >XP_022997893.1 EID1-like F-box protein 2 [Cucurbita maxima] >XP_022997894.1 EID1-like F-box protein 2 [Cucurbita maxima]) HSP 1 Score: 516 bits (1328), Expect = 8.71e-185 Identity = 239/246 (97.15%), Postives = 243/246 (98.78%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy TrEMBL
Match: A0A1S3BP99 (EID1-like F-box protein 2 OS=Cucumis melo OX=3656 GN=LOC103491829 PE=4 SV=1) HSP 1 Score: 531 bits (1368), Expect = 3.61e-191 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy TrEMBL
Match: A0A5A7UYZ3 (EID1-like F-box protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00530 PE=4 SV=1) HSP 1 Score: 531 bits (1368), Expect = 3.61e-191 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy TrEMBL
Match: A0A0A0L849 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G516490 PE=4 SV=1) HSP 1 Score: 531 bits (1368), Expect = 3.61e-191 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy TrEMBL
Match: A0A6J1CTM6 (EID1-like F-box protein 2 OS=Momordica charantia OX=3673 GN=LOC111014183 PE=4 SV=1) HSP 1 Score: 524 bits (1350), Expect = 2.01e-188 Identity = 243/248 (97.98%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Cucsat.G15653.T1 vs. ExPASy TrEMBL
Match: A0A6J1GBQ5 (EID1-like F-box protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452709 PE=4 SV=1) HSP 1 Score: 519 bits (1337), Expect = 1.93e-186 Identity = 241/248 (97.18%), Postives = 246/248 (99.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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