Cucsat.G15599.T3 (mRNA) Cucumber (B10) v3

Overview


Name	Cucsat.G15599.T3
Type	mRNA
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic
Location	ctg2009: 2766987 .. 2770480 (+)
RNA-Seq Expression	Cucsat.G15599.T3
Synteny	Cucsat.G15599.T3

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTACGTGTACTGCCACGTGATCAAGATCAGATCTCCCAACATCTTCGAACGGATAAGTCAAGCCACAGTGAGGGAGGGGGAGGGAATTCAATTTTTCCCAATGGCCGCTTTATCAACTCCCCTCTCTCACAATGGTTTCTCTCGCAGCTTCTTCTCTACAAGACGTTCAAAAATTGTATACCCTTTTCCCCATTCGCTCCCCCGTATCACCTGCTCTGGTTAGTCTTTTCTCTATCTCTTCTATCTATAGTTTTATGCATTGATTTACTCCAATAATTGCTACATTCTGTACCCTTTTGTGGGTAAATTGCGTTGGCTTCCTGCCCTTTGATTGCCTATTACATCTTGTTAAGCTTAGGATCAAGATGCTGGTTCGCCAAATTGGTTATTTCTTTGAATGAGTTCAAATTTGTAACAAAAAAATTAATGTGTTTGCATACCCTGAAATGTGCTTAGTCTAATACAATTAGATGGTAATTAGATGGTGTTTGGTGCGCTGAGTTGAGTTCTAAAGCATGGAATCAATGTGTTGAAATTAGTAAATCTATTTTAGAGGGGCATTGTTGTTTAGTCCGGAGATAGTAATCATTAGAAAGAGGAAGAGAGACAAAGAAGAAGATGAACTGATGTTGTTGACATTGATGAAGTTGAGTTATTTAACACCAATTTATGAAGTTGATGGGCTAAACACTTTCGTAGGATTCTTCACCAAGTAGAGGGAAACAAATATTATGGAAATTGGACATTAAGTTGGAGTAAACAACTCAATTTCAAAAGTAAACACCATTGAAGTTTGTACATTTATTGAGTAAATTTTTCTACCCTATATTTTTATTTTTTACATTTATCGAGTAACTTTATTTTCTTTCTTAATCTACTTTTCACAATTATCAAGCAACTCCATCTTAGAACTCTGTTACCTTTGTCTAACAACACAAACTTACTAATTCCACTCAATTGGTCCAACACCCCTAACTCTACTCAATTGGCCAAACACCCCTAGCTTCATATCTTATATCTTACAACACAAAACTACTAACTCCATCATATTACCTCTAGACTTATTAATTCCACTCAATTGGCCAAACACCCTCTAACTGAACTTGCATCGAAGTATTATGAGTTATATTTTAATGGAGTTTTATCTGCCATGCCATTGTCGCTGCACTTACAGCTACCAGGGATGGGGCAGAACCAAGAGAAAATTTGTCACCCTGCAAGCATATTAGTACTGTAGCTTGTGGACTTCTTGCTGTTTGGGCTTTGACAAATACCTCTCCTGTCATTGCAGCTAATCAGGTTAATAGCATTTCTGTTCATTTATAGTTTATACTTTTAAGTTTTGTATTGAATAGTTTGTACCCTAGATAAATTTTCAACTATTTGGAATATATGGATATAATCAACTTTGCTGCAGTAATCCATCAACTCAAGTCCATGACAATATACTGTAGTATGTTGATTATATTTAATTTTTGCATTATTTTCTGTTGATTTGAAGTTTGTAGTGATTTATAACAGTTGACACGACTTTTAGAATAATGAAATGCTATTCAAATTTATCATGATATTTGGGTATGAACTGAAAATTCGCAAGCGCTATTCCGAACCTACAATGTTGCATTTAAATATAGGCTTAAGATGCAAGACCTAGTTATTTTTTTAGGGGGTTGAGTGTGCTGGTTTGGAAGCCCTACTTTTCCAGCTCCCTCCCACATCATTCTGAGCCCACATCCCTTTCTGGATGTTCTACGATACCATGATTATAAGGCTCTTTCTGATAGGATAACTTGTCAGTTACGTTTTCCTGATTCTAACTAAAATTCTGTTATGTACTTCACCAGTTGACATCCAGTTCATGTTACTCGATTTTCTTCTATTCATGTTATGTTTTTCCTTTTATAGTGATGATTGACTAATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATGTGAGCGTGCTTTTGTTGGTAATACCATAGGTCAAGCAAATGGTGTCTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAACCAGTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTAAAACTCTCTCTATCATACCCCACTCTAAGAAGGAAGTGGGTTGTTAACAAATCATTCATATTAGTGGTGATTTTATTAAGTTTTAAAATCACTTTCAAACATATTTTTGTTGCTCAAATTATGTTCAACATTTAATTATATACTTTTAGAAACGTACTATTAAATTTTATTTTGAATAATTTAAAAACATTTTAGAATGTTTTTTAAAATGACAATAACGATTTTAATCATTTTGAAAATCACTCCTAAACATGTCATTAGTTTGTAGACTCTGCTCTCAATAATGGTACATAGATAAAATCCACATGCTCAACATATGCTAATTTATAGAATAAATCCCAGGCTCCAAAACTATTTAGGAACGTGGATGATCTCATTTTAATTTTTAACTGGAATGAAACATCAAAAGATGTTTCATACCCTGCTCTCTTCTTGTGCTTCAAGTAAATTTGATGGGAAGCCAAAAATGCATTCAAGTAGACTATTAAGAAGTTTCATATCTGTTGACCTATTAAGCTGCATGTTAATCCCATGATTGATCCTAAGCTGGTCATGGGTTTGCTAAAATTATTGGCGGATTTGTCATTTGGTTTTTAGTTTTTGGAAATTGAATCTATGAACACTCATGGCACTCTAAAAAGGATACATATAAGTACATGTTTTCTGTTTTAAGGACGACTCCATAAGAATCTTGAAAAAAAAACTCACAGTATGGGTTAAAATATCATGACAACGTTGCATATTGCAGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCCACATATATAGTTTCAATACTTGCACTATTTGTATTGTACAATAAACAGCTTGATTGTTTTCAGTTTTGGTAAGTAATATATATACAAATCAAAAGAGATGACTCCCTCTCACTCCTATTGAAGCACTACGTGCTGTTTTCTATTTCTCATGGCGTTGTTTCACTGTTTCATGTAATTTGGGCTTGCAGGGGAAAAAAAGAAAGAGATTTGTCTTACTTTTTTAATCTAGGGTTTTAACATTCCGTCGGTGCTCTC

Coding sequence (CDS)

ATGTTATTCACTTTCTGTCGCAAGCGTCAAATTGTTCGACGTTTTACTTTGGGAAAGAAACCTGTTGATCTTATAATGTCTGGGACTTGCAGAGGCTGCCTCCACTGTCTACAGAACCCGACCGATTTGAAAGGGAAATCTCTTGCAGCTGCATTGATGTCAGATGCAAAGTTTGATGGTGCAGATCTCTCTGAAGTGGTAATGTCAAAAGCTTATGCTGTTGGAGCCAGCTTCAAGGGTGTTGATTTCTCAAATGCAGTTCTAGACAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTGCTTTCAGGGTCAACATTTGATGACGCTCAATTGGAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTTTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MLFTFCRKRQIVRRFTLGKKPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 176.8 bits (447), Expect = 1.9e-43
Identity = 92/134 (68.66%), Postives = 112/134 (83.58%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +   + T+LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFK
Sbjct: 110 KPLDL------RFCDY-TNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFK 169

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GV+F+NAV+DRVNFGK+NL+GA+F+NTVLSGSTF++A LED VFEDTIIGYIDLQK+C N
Sbjct: 170 GVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRN 229

Query: 140 PTISPEGRAELGCR 154
            +I+ EGR  LGCR
Sbjct: 230 ESINEEGRLVLGCR 236

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.4e-09
Identity = 36/111 (32.43%), Postives = 57/111 (51.35%), Query Frame = 0


Query: 47  SLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNT 106
           +  +A M ++ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +
Sbjct: 130 NFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRS 189

Query: 107 VLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 153
           VL+ S    A++E A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 190 VLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 37/122 (30.33%), Postives = 58/122 (47.54%), Query Frame = 0


Query: 42  DLKGKSLAAAL-----MSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 101
           D  GKSL  A      ++D+ F  ADL   V + +  +GA   G D +N +    +F  A
Sbjct: 58  DFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGA 117

Query: 102 NLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELG 154
           +L  A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LG
Sbjct: 118 DLTNAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLG 177

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-05
Identity = 34/105 (32.38%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 35  HCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFG 94
           HC  N  D     L  A ++ A    ADL++  +  A+AV  +FKG   S A L      
Sbjct: 89  HCQMNWAD-----LTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----A 148

Query: 95  KANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 140
            ANL+GA  + T L+G+    A L +A F+     + +LQ+ C++
Sbjct: 149 HANLRGANLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot
Match: Q8Z4G9 (Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 30/84 (35.71%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 43  LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGAL 102
           L G +L A  + DA   GADL   ++  A   GA+FKG + S A L     G +NL  A 
Sbjct: 159 LTGANLTAENLCDADLSGADLEGAILFMADCDGANFKGANLSGASL-----GDSNLTNAC 218

Query: 103 FKNTVLSGSTFDDAQLEDAVFEDT 127
            +++++ G+T D A L  A  + T
Sbjct: 219 LEDSIMCGATLDRANLTGANLQHT 237

[Close]

BLAST of Cucsat.G15599.T3 vs. NCBI nr
Match: KAG7013309.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217 bits (553), Expect = 1.24e-69
Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +   + + LKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 35  KPIDL------RFCDY-TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 94

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 95  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 154

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 155 PTISPEGRAELGCR 161

[Close]

BLAST of Cucsat.G15599.T3 vs. NCBI nr
Match: XP_011651313.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 hypothetical protein Csa_010496 [Cucumis sativus])

HSP 1 Score: 219 bits (558), Expect = 2.56e-69
Identity = 117/134 (87.31%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. NCBI nr
Match: XP_008455988.1 (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 218 bits (555), Expect = 7.30e-69
Identity = 116/134 (86.57%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. NCBI nr
Match: KAA0050533.1 (thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa] >TYK11278.1 thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 218 bits (555), Expect = 7.30e-69
Identity = 116/134 (86.57%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. NCBI nr
Match: XP_022945269.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 217 bits (553), Expect = 1.47e-68
Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +   + + LKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL
Match: A0A0A0LC74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1)

HSP 1 Score: 219 bits (558), Expect = 1.24e-69
Identity = 117/134 (87.31%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL
Match: A0A5D3CJC6 (Thylakoid lumenal 17.4 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G001360 PE=4 SV=1)

HSP 1 Score: 218 bits (555), Expect = 3.53e-69
Identity = 116/134 (86.57%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 218 bits (555), Expect = 3.53e-69
Identity = 116/134 (86.57%), Postives = 119/134 (88.81%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +       LKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 7.11e-69
Identity = 115/134 (85.82%), Postives = 121/134 (90.30%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +   + + LKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

[Close]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 216 bits (549), Expect = 2.88e-68
Identity = 114/134 (85.07%), Postives = 120/134 (89.55%), Query Frame = 0


Query: 20  KPVDLIMSGTCRGCLHCLQNPTDLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFK 79
           KP+DL      R C +     + LKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFK
Sbjct: 111 KPIDL------RFCDY-TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFK 170

Query: 80  GVDFSNAVLDRVNFGKANLQGALFKNTVLSGSTFDDAQLEDAVFEDTIIGYIDLQKLCVN 139
           GVDFSNAVLDRVNFGKANLQGALFKNTV+SGSTFDDAQL+DAVFEDTIIGYIDLQKLCVN
Sbjct: 171 GVDFSNAVLDRVNFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 230

Query: 140 PTISPEGRAELGCR 153
           PTISPEGRAELGCR
Sbjct: 231 PTISPEGRAELGCR 237

The following BLAST results are available for this feature:

BLAST of Cucsat.G15599.T3 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	1.9e-43	68.66	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	1.4e-09	32.43	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	2.0e-08	30.33	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
P74221	3.5e-05	32.38	Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]
Q8Z4G9	1.7e-04	35.71	Secreted effector protein PipB2 OS=Salmonella typhi OX=90370 GN=pipB2 PE=3 SV=1	[more]

BLAST of Cucsat.G15599.T3 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013309.1	1.24e-69	85.82	Thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita argyrosperma subsp....	[more]
XP_011651313.1	2.56e-69	87.31	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis sativus] >KGN57651.1 ...	[more]
XP_008455988.1	7.30e-69	86.57	PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucumis melo]	[more]
KAA0050533.1	7.30e-69	86.57	thylakoid lumenal 17.4 kDa protein [Cucumis melo var. makuwa] >TYK11278.1 thylak...	[more]
XP_022945269.1	1.47e-68	85.82	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata]	[more]

BLAST of Cucsat.G15599.T3 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC74	1.24e-69	87.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G238170 PE=4 SV=1	[more]
A0A5D3CJC6	3.53e-69	86.57	Thylakoid lumenal 17.4 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C2V7	3.53e-69	86.57	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1G0I9	7.11e-69	85.82	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1HX78	2.88e-68	85.07	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 87..125 e-value: 1.6E-8 score: 34.0
None	No IPR available	GENE3D	2.160.20.80		coord: 39..153 e-value: 1.3E-22 score: 81.4
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 38..153
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 41..135
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 38..153

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsat.G15599	Cucsat.G15599	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15599.T3.E1	Cucsat.G15599.T3.E1	exon
Cucsat.G15599.T3.E2	Cucsat.G15599.T3.E2	exon
Cucsat.G15599.T3.E3	Cucsat.G15599.T3.E3	exon
Cucsat.G15599.T3.E4	Cucsat.G15599.T3.E4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15599.T3.C1	Cucsat.G15599.T3.C1	CDS
Cucsat.G15599.T3.C2	Cucsat.G15599.T3.C2	CDS
Cucsat.G15599.T3.C3	Cucsat.G15599.T3.C3	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsat.G15599.T3	Cucsat.G15599.T3-protein	polypeptide