Cucsat.G15514.T3 (mRNA) Cucumber (B10) v3

Overview
NameCucsat.G15514.T3
TypemRNA
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionDNA-directed RNA polymerase III subunit RPC3
Locationctg2009: 77254 .. 87671 (+)
RNA-Seq ExpressionCucsat.G15514.T3
SyntenyCucsat.G15514.T3
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAGAAAGTTGTAGGCGTTGCAGGTTTGTGAATTCCGGTATATATAAATAGGGTTTAAAGAAAAGGAGAGAAAAAAGATTAAACTCACACTTCTTCCTCCACTCTCTTCCCTCCTCAGTTACGCCAGCTGCCGGCCACAACCAGCAAGTCGCTACCTTCCTTCTTTCGTGCCGGAGTTGCTCGTCGCTGCCGTCGGAATTTCCCGTTCACCTGTCGGTTACCGCCGTATCTCACCGAAAATTTAGTTTGGGTAAGATTTTCGTGCTTTTCTACAATTTTAGTTGAATACCTTGAATGCCCATTAACTTTTGGGTTTGGTTGGTTAACATCCGAAACTGGGTTTGGTTGGTTAACATCCGTTTGGTTAGATATTGTATTAAATTTGTCTTCATCCATTTTTTGGGTACATTGGTGATTTGAGAGGTTTGAGACCAGTTTCGGCGGGAATTTCGGCAAGTATTTCAACTTTAGAGTTGTTTGTTGTTTGGGATGTTACCAATTAAGATTACAAGTGATGTTATTTGCATTTACCTATATGTCTATGACGTGGACCAGCTAGTATTAACTTGAATGTTAAGTAAGTAGGTGACGATTTGCCCTCCTAACATTGTTATGTTTTCGGGTGCCACTGGGTTCCCTGCTATGTTATTAGGTGCCACCAGGTACATGTCGGGCTTCCTGGACAGTTGTTTTCAAGTACCTCAGAATTCTATTAACAGTCGCCATGTGTTCCTCATAGGGGACTTGCATGAACTGGCTAACTATACTCACAACATAGGATATATCTGATCTAGTGCGAAACAAATAAATCAACTCTTCCACAAGGTTCTGATATTTTTTTGTCAATTGGAACTTTATCACTTGAATTTCTCAGTTTACAGTTGAACTCAATAGGGGTATGAGCAGGACTACATCCTAGCATGCATGTTTCAATCAACAAATCAACTGTATACTTTCTTTGAGATGCAACGATACCATCTTTTGATCTAGCTACCTCCATCCTAAGGAAATACTTTAGATTTTCCAAGTCTTTAATTTCAAACTCATTACCCATCTTCTTTTTTAGTTGGATGATCTCAACAGCGTCATCCCCAGATAATACAATGTCATCAACATAGACAATCAACACGGGCGATCTTCCCAGCCTTGGAGACTTTCGTAAACAAAGTGTGATCAAAGTGCTCATGATTGTACCCTTGAGACTTGAAAAAGGAAGTAAACCTATCAAACCATGCTCCTGGTGACTGTTTTAAACCATACAAGGATTTTTGAAATTTGCAAACCTAATGATCAAACTAGGCTTCAAATCCTGGAGGGGGGCTCATATAGATTTCGTCTACTAAGTCTCCATTCAAGTTGATATAGGGACCAGTCTTTATTCTCATCAACTGATAATAGGACTCCAACGGTGTTTAGTTTTGCAACTGAGGAAAAAGTTTAAGAGTAATCAACTCCATACGTCTGAATAAACCCTTTTGCAACTAATTTGGTTTTGTATCTGTCAAGAGTTCCATCTGTCTTGTACTTGAGTGTAAACACCCATTTACATCCCACGGTTTTATGCCCCTTAGGGAGATTATAGATCTCGTAGCTCTTGTGCTTTTCAAGAGCTCTCATCTCTTCCATAATTGCAGTTTTCCACTCAAGGAACTCTAAAGCAAGTGGATATTTTTAGGTATCATGGTAGAGTCAAGGCTGGCTATAAAGGCTCTGAACTATGGTGATAAGATCTGATAGGAAACATAGTTATAGATAAAGTGTTTCGTGCAAGACCTGATACCTTTTCTTAGCACAATAAGGATTTCAAGAGAAGAATCATTCTCATCTAAATTACCTCAATGATTCGGTTTAGCCTCATCACCTGTCGTTTTTGCCATGACCTCAATCTCATCAACGTTTTCAACACTGCCTTTTTGTCCCATTTTTTGAAGAACAATTGTATTAGACTTGCCATTCTCAGCCATTCCAGAAGGTGATGGTTCTTTCTCTCGACAACCCGATTTTGCTGGGGTGTGTAAGCATAGGAGCTTTGATGAACAATCCCTTTGGATGGCAGAGACTCAAAGGAATAGTTTTGAAATTCATGACCATTGTCACTTTGTAGAATTGCAATTTTTGCATTGAACTGCGGTTCGACGGTGTGAAAGAAGTCCTAAAAAGTGGAGGTGACCTCAGATATGTCAAAGATGAGAAAGATCCAGGTAAGATGGGTATGGTCATCAATGAATGTCACAAACCACCCTTTTCCAGAGGCAGTAGTAACCTTGGATGTTCCCCATACATCGCTATGGATAGGAATGAAAGGTTAGGTTGGTTTGTATGGTTGGGAGGGAAAGGAGGCCCGATGCTGTTTTGGATGAATACACACATCAAGATAAGGTAGAGACATCAACATTAGAGAAGAGATGAGATGAGGAAATAAATGTTTCATATATTGAAAATTGGGATGGCCCATACGAAAATGGCAAAACATACAGTCCTTTTCAGAAGTAGTAAAGTCCACAGATAAAAGAGGAAGAAGATTAAAGAGAGAAATATGAAGATCAATGAAGAATCTCTTTGTTAAATTGTTGAAGATATTCAAGTGGGCTATATTTTGCAAGACTGTGTGAGGACTCTACGGTTGTTATTTATTTGCTATTATTATTTTTGTCCCTTTAGTTTTGAATTGGGGCAATGAGCTTTTTAAACATACTGCTTATTTTTGGATTAGGAAATATTAGATGAGTTCCTTATCTTTTTTCTTATAAAAAGGTCAACCTAAAAACAAATATGCCAAATTGTGTGTCACATACGCATCTATTCTTTGTCTCACATAAAGTACTTGTGGTTTGTTTTAAATGATTGAACTCGGAGGGTTCTAGTCACTTCGCAATTAAACATTTCTAAAATTTTCCAGCTTTTGGTCTATGATTTCTAGGGGTACCCCGAACTCAGGTTTTATGTTATTTGAAATTATATTTAGTTGAAATTCTTTACTTTATGAGTGGTTTGATTCTTTCGTTTTGGTTGTAAAAGTTTACTTTCAAATTTATGCATGCATAAGGTAGTGAGTATTGACCCTGTTAGTAGTCTTAAAGAGTTGGGTTGTTACATTTTGAGACACTGAAACCTTGGTGACATTGACGGTGACGGCGAGTACCAACGACGGCAGTGACTGCGTTCATCACATAGCCGTTCCTGTAATATTCCTATTTTGTGTAGGCTTTATCAGAAACTTTCTTTTGTTGTTTTGTACTTTTTCTTGAGGAAAGAAATTGCTTATTTTTTTACATCAACGTTGAACAAAGTGTTTGTTGTTCGTAGTTCTAAGATATTTGGTTGATACTTTGTTTATGACCTTCCTCACGTGGGTTTGCAAGTGCGAGACATGGCAAGAGATTTCAGAAGTTTCTAAGGGTCTTTTTTCTTACTGTACTTTTGTTATTGATATTCTGGAATAATTAACTATAAATTGTTGGTTGGTACTTAAGGATGTCATAGACGGACAACAATCTTAAAGAAGAAAATATGGTGATGACTCAGTATGGCATCAAATATGCCGTCCACATTATGACTGCACACTTCGGAAATCTCGTCGCTGTATGCTTTTCTTTTTTAATCCTCGCTTCAGAAATTATCAGCTTCTTCTTCATCTTCTACGTATTATCGTTGTTGATCAGTATTGTTTGTGCATTGACAGAAAGTGTGTGAAACCCTGCTTCGAAAGGGACCTCTGACGCTGAGACTTCTTATACGATTCACAGAACTTACCCCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGATGTGACAGAAGGTAGAGAGTTCTGGGTCTTTGTATTTTTTGGTAAAGTTAATTGATGCTTCGTTAATTATTGGCAAAAGAACACTCACGAGCTAACAGAGCAACCCTTTTATCTTAAATTGTATCTGGACTTCAGAATTGAGTTCCACATAACTGGGATTATAAACAGTGTTTTGGTAGGATTTATTTATGCTCAGTGACACTGTCTAAAGTCCATTCGTCTTTTAAACTTATTAGCTTTGATAGGAAGCTATTATATGGAATCACATTGGATATTATTGGATAAATGGGATTTTGAAGAGGTAGTTGTATTCTCAGAAAGCACACCACTTGTGTACAAATTGTGCTTCTTATCACTGTTTCTGTAATTGTTTGTATAGGTGAGTTTGGAGATGCATCCAAGGATGATACACTATACTTGGCATTGTTTAGTAATATACTTCATCGTATGAGGTTTTCCAAATTTGTGGCAATTGCTTCCCAGAAGCTTGGGCAAGATAAAAATGTTAGTTCATTTACTCACAATGAAAAAATATGTTTTATTGAGAAATTTCCAGATTCAAGTTAAGTTATTTTCTCAACTTACGTTTCTGATTTTGTAGTGTCAAGAACTTCTCGAGGGTCTGCTACAGAATGGTAGGCTTTCAATGGAACAACTGGTTGAAAGAGCAGAGTCGAGTGGACGTGCAGGCAAGTTTGTTACCTGGTATTTTTATTTGCATGTTATTGTTCTCTTCTATCTGCTTTATCGCTTACTATGATATGTTCTCTCAGTGTCTACAAATCAGATATTGATTTCAATTTTTAAATGGAACGTTATGATTCATTATAGGGAGATGGACAGATCCCATAGATAATTTTCTTTACAATTCTTATTAGTCCTAATATTAGATTTTATTGTTTGAGCAAGAAGCTCATATCTTTGAACAAGTGGAATTACTATGGAGGGGGAAGAATGTCAATGCTGTTCTCTAACTACTCTGTTTCTCTGATTCTAGCCAATTGCCAATGTTTATCCCCCCTTGACTTTGTTGGGGTTTCATTTATCAATTATATTTCTTTTTGTTTAAACTTGTTTTTCTTTCATTTTCATCTTGTTTAGAAAAGTAAAATTGGTTTTTATTTCCTAAAGGCTAAAACCATGATACATTTGGCCGAACTTACTGAACAAGCACATTAAAGAAGAAATTAACATAATCCAGAAGGTGGTTCTTGCACTGAGAAAGTATTTGTAACACTTATTTGCTTTCAATACATCAACTATTACAAATGTTTCGTTACTGAAGTATTGTTTCTGCATTTTAGGAAACCATCCAATTTCAGATGTTGTACACGACAGTCTATTTAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCAGAACCAACTCTTTCGCCCAAAGTTGAAGAACCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGGTAACTGTCGGTCTGAAACTTTTTGTGCAATATGGTGTCAACTATTACCTTTGTGTTATTAAGTGGATTTGTTACAGATATCTGAGGTGCCAGAGACCTTAGAACAACGTCTTATAGAAGCAGCACGTCCAGTGGAAGTTCTAAGATTTTCAATGGGTGATACCAACCCAGAAGCTGAAAAGAGTGAACATCACTCACAAATTTCTGGACAGAAGGTATGCATGAGAATGTTATATGATACCAAATTACTTGGTCAAAACATGTTTAGTCTTGCTCATAATTTTTCTGTAGCGCAAACACGACGATCTAGAGATTGCACAAGATTCTGGAGATGCAGATGGTCCTATTCTTTGGCGTGCCAACTACGACGAGTTTATAAGATGTCTTAGACATAAGGTTAGTACTATTTTATATTTTATCTTAGGAATTTTTGTACCTTTTAGTTAGGTGATATGACATTCACTGTTACAAGGAATGTCACGCCTCTTTAGTTTCATTCACATTAAGGATGGTTGATGGGAAAGAAAAACGGACATGACAAAAATGAGCAATTTACTCACTTGAAGCCTATTGATGGAAGACTTCAGTGTGCAACTTTTTCAGAGACATTGGTATTATTATTATTATTATTATTTTATATAATATGTAGAACAAATATAGAAGCAGAACCTAAAACCCTTGTGGGTGACCTATTGGACCCTGAGCCTGTGAGGAGGAATTGAACAAAAGACCCCAATCTAAAAACAATGGGGAGAGAATGAATATTACTATATGAATTGTGTAAACTGTAGAACTCGATTTATTGGAGGTTGAATACTGACTTTGGACACAAGATGGGCTTGCTAATGTTATACAAGAACGTGAAATAACTAGCTTCTTTGAGTGTTCTAATTGGTCACCCATGTTGCCCTTCACATTTTTGTTTATTTTCCTTCTTTTGATCGATTCCTTTTTCATTGTGATAATTTTGGAAATGTACTTGTTATCTACATTCCAGTAGTAATTGGATCAATATCTTTGTATGGCTCTAGGCTTGCATTGAACATGTTAGATCACAGTTCGATGATGGAGTGGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGGTACAATCTAATGCTTCTGTAGATTCCTCATACAGTTTAGTTATGCAAGTGTTTGATCTTGATGCACATTCATTGTATTACACAAATCATTTATTTTTTCCTTCCTTTCCTGTTGGGTCTGGAATTTAAGAAATTGTTTGGAGATTCTTTTGAAGACCACTTGCTACTTTTAAAAATAAAATATTAGTGAAAACATGCTGGCTTGATTGCTTTATACAAGTATTTATATATATATTTATAAATATATAGACGAATTTATGCAAGTTGTTTTCTAATGTTTTCTTTTGGTTTGTTTTTAAAGGTGAGTTGGTTGATTCTTTGAATAATTGAAATTGTTTTTTTTCTAAAACGATTGGATGCATGGTTAATACATTTTGTAAAGACTAAATCATGAAAGGTAGGGCTCAAGAAATATAATAGAACGACTTGTGATTTGGAAACCATTAGAAATGTTTTTCCTTTATCACCGATTCACCTGTGTGCCCTTTCTGTGTCCTGTTTTAAAGTTTCAATGGTTTGCAGTTCCTTTATCATTAGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTTGCTGCATTGGGTTGTCCGGGGATAGATGATTATAAAATCAGTATGTTCACCACTGTCGATTTCTCAATGTGTTTACATTTTACACTTCTGAGTGAGTTTAAGCTTTTCTAAAAACATGTGATTGCACAGATTTACGGAGGATAATCGAACAAGCTCAAACTGATGAGGTCTCTCCCTCACTCTCATACATCTAGTGAAAAGTACACATATGTTCTCTTGAGTCTTGAGAAATGATTCTATTTCTTCTTGCAATCAGTAGATTGAAATCTCTGATGTGAGTTAGTACTTAATTTCTTTAAATAACAACTTTGATTGAGTAAAAATGAAAGAATACATAGAAATCACTCATCGGAAAAACCAAGCCCACTAAAATGGGAACCATTTATAAGTAGGGCTCTGGCTTTCAAAATAGATCCTATAGAATAATTCACAAAAGGTCATTGAGGGAAACATTTCTTCTCCGATCCCTTGCACTTTCAGAGATTGATTAATCTATAGCCAACAAACTTGGATTCTCTTCGTTACAGGTTGAATCAATTGTTTTGAAAAGATATGGAAGGGATGCTTACAGAATGTTCAGATTTCTGTCGAAAACTGGTGGCTTGGTTGAGACAGAAAAGGTAAAGAGTTTTCTGCCGGTTACACTCAAGATTGTCCGATGAGTGTAATGTATACATTTTATCTTGAAATATATATAATTTACATGTGAATTCAACTAAAAAACCAATAATATAATGGGTTACCCTTCTGCCCTTACAAATCGTTGTCAAGATTACTAGGAATTGCTCTTTTTTTACTCAGTATTTTGAAATTGGCCATTTGTGATTTTGTTTTTTTGGTTAATTATTTGACAGATATTCCATTTCTTTTCCTGTAGATTTCCGATAGTTCGTTTGTTGATAAGAATGAGGCACCTAAAATTTTATATAGGTTGTGGAAGGACGAGTACCTATACATGGAGGTAAACATCTTTGCTCTGTAAGCACGTGTTTTTTGCATCCAAATTCACATATTTACAAATCATGAAGTAAAAGATAATACCATACCCTTTTTTCCAATGAGAAAGCACGGAACTGTCATTGATAGAATAAAAAAAACATAAAGGAGTGAGTGACCATGGAGGAAGCAAAAATATCATACTAGATTACTTGTTCAATTCTTCATGGCATCAGACTTATTGGTTTCCAGTACATTAATTAAATACTCAAGATAATTGTGTGTAATCAGACATGGATGTAACCAGAAAAATAATTACAGGAATAGTTAATATTTAATCAGGTAACATATGTTTTATTATTAGGATTGGTTGTAGTTTTATTAGCAGTTCTGCACATCTTTGATTTAAATGTCCTTATATCTTGTCTTTGTTTCTTCATTTCTTCCTTTCTGTGTATCGTCTTCTACCTGCACCGGCTACCCATGTTCTTTTGCAGCTTGAGTGAGTTACCTTGTTAGTCGTTTTTGGGGCATCATAGTGAAACAATTTATCTTTGTTGCAGAAAGTAGCTCTAACAGTACCTAGACATTCACTATGCTTGTTGTGGAGAGTAGACAGATATAACTTATGGGAACATGTTCTGGATGAGATGTATCATGCTTCATTGAACTTGCAGCTACGACTGGCTCATGAGATCGAAGAAAACAAAGAGGTTAATGTGAAAATTTACTTATTTCGTATGTGCAATTGGTGGTATTTGTTTCCAGGGTTGGGATTAGATGGGTTAGACATCCTAAGTCCAATCCCTTGTCTGGGACAAGCGTATAGGAGTCCAGCTTCCTACCCTCTTTCGAATGAGTTTGAATAGTTAACTTTATTCAAACTCATGAGTTACCTTTTTTTCTTTTCTAATTTAATCTAGAAGGTTTATTGGTCAATTTCCAAAGACAACCTTGGCAAACTAACCTCTGGCTACCAACTAATGTTGAAAAACATTAACAAAAGCACTTTGAATAAAAATATAAATATCACAAATATCACATATCAACCTAACTGCCTGCCGGTCTTAACATTGCCAGATTTGAGATTTCAAGGCTAGGCACCAAACACCCCCTTGGTTAAGACTTAACAGTGATATTGACCACAAGTATGTTTTTCACTAATCTGGTTACTTTAGCCTTTGTCATCTTATTCGTGTGGTGTCCCATAGCAGAACATTTTAGGATATGCCAAATGTGGATTTTGCCAACTTTTATCAGTAATGGCTAGAAAACCACCTTTGTGGTTGCATGACAGGATACTTGTATGTGAACTGAAGTTGAAACCTGTTTTGGGGGTGTAATCGGTTCAGTTACGCTTGGTTTTAACCTCAAACCGAACTGTCATAACTTATGAAAATAAGAAAACTGCACGAAACTGCTGAAGGGATATTAACTGAAGTGCACATAGCCAATATAAACTGGTTTACTCGGCTCTGTTTCCTGTTAACATTATTAATGTTCGGTTTTGGTCTCGACCATGGAGCCGAATTCATTATTATTGGATCGAGGACTAAAGCGTGTCAGGAAATTTGTGTTAACTGTGTGTCAACATTCAAAATAAAATATTTGTGTTCGCCTAGGCTCAAACACGTGCATTAGACTATTCAGTCCAATGAAACTGCCACTGGAGTGGAGCCATCCGCTGTCTTCATATAAATATAGTTTTGCGGTCGGCTTGGTTATATTATAACTGCTGAATGCTAAACCCATCTCCAAACCTGTTTTGCCCTCGCACCCCTACCGTTTTATATAATCACCCCTTTAAGCGTATTCTCTATGTCGTTTGTCTTAGTTTGATTAATTTTCGCTTTTGCTCTGTTCCCTTACAAAACTAGTACTTTCATTATCATTTACTTTAATAATAGTTTTGGAGTGAAGATCTGATTCTGGTGACTATTCCTTTCATGCTTTCTCAGTGGACAAGTTCAAATACTGACTTCTTGCTTTTGTCATCTATTTTCCAGCTTCTGAGTCTTCCAAAAGATAACAACAACAAACCCCTCGTGAAAAAAATGCATCATTTTGAGAATGTCAGAAACCTCCTGCGGTCATCACTGGTGAAGCTCGACGATGCTCTAATGCTTTTCCATGACTTCTGAATTTGAAAATTCAGATCAGTAGCTCATTGAGGAGTGTATTATATGGAGGAAACTTCTTTCAAACTTGAGAACAAAAATTGTGTTTTCTTCTTTCTATTGGAATACATGAATTTCACTGTCCTTATAAATATTATTTTTTTAATAATATATATATATATATATTTTAGTTACCACATCATTGAGAGACTTGTCAATCACAATAGAGCTAAGGTTTTAGTTTTAGGGGTTTACATGGAGGTATTTTTTCCCTCATAAATGGTTTGTACTCTTGACATTTTCTATTTGAATTGAAAGAAAATTGTATCATTTGC

Coding sequence (CDS)

ATGGTGATGACTCAGTATGGCATCAAATATGCCGTCCACATTATGACTGCACACTTCGGAAATCTCGTCGCTAAAGTGTGTGAAACCCTGCTTCGAAAGGGACCTCTGACGCTGAGACTTCTTATACGATTCACAGAACTTACCCCATCACAGGTCAACAACTCCCTTCTTATTCTCATCCAACATAATTGCGTCCAAGCCTTCACTGATGTGACAGAAGGTGAGTTTGGAGATGCATCCAAGGATGATACACTATACTTGGCATTGTTTAGTAATATACTTCATCGTATGAGGTTTTCCAAATTTGTGGCAATTGCTTCCCAGAAGCTTGGGCAAGATAAAAATTGTCAAGAACTTCTCGAGGGTCTGCTACAGAATGGTAGGCTTTCAATGGAACAACTGGTTGAAAGAGCAGAGTCGAGTGGACGTGCAGGAAACCATCCAATTTCAGATGTTGTACACGACAGTCTATTTAAACTTTTGAATGCCCATTTTGTTGAACGCTGTCCAGCCCCAGAACCAACTCTTTCGCCCAAAGTTGAAGAACCTCCTCCTAGAAAAAGAGGTGCTAAGGCTGCCAAGATATCTGAGGTGCCAGAGACCTTAGAACAACGTCTTATAGAAGCAGCACGTCCAGTGGAAGTTCTAAGATTTTCAATGGGTGATACCAACCCAGAAGCTGAAAAGAGTGAACATCACTCACAAATTTCTGGACAGAAGCGCAAACACGACGATCTAGAGATTGCACAAGATTCTGGAGATGCAGATGGTCCTATTCTTTGGCGTGCCAACTACGACGAGTTTATAAGATGTCTTAGACATAAGGCTTGCATTGAACATGTTAGATCACAGTTCGATGATGGAGTGGTAAATGTCTTGAGTGCCATTTTGGAGGCTACTCGAAGTTCTGAAAAAATCGTGAAAACAGAGATAACAGTTCCTTTATCATTAGATAACATATATGAGGAGGTAATGAAGAATGAAGTAGGACGGAGTATGACCTTAGATCGGGTTGAAGCTTCCCTTGCTGCATTGGGTTGTCCGGGGATAGATGATTATAAAATCAGTATGTTCACCACTGTCGATTTCTCAATGTGTTTACATTTTACACTTCTGAGTGAGTTTAAGCTTTTCTAA

Protein sequence

MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFTTVDFSMCLHFTLLSEFKLF
Homology
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BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match: Q55FJ5 (DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=44689 GN=polr3c PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.8e-13
Identity = 55/185 (29.73%), Postives = 91/185 (49.19%), Query Frame = 0 

Query: 6   YGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTE----LTPSQVNNSLLILIQ 65
           Y  K A+ I+   FG+ V KV E L+++G  + +++ +       LT  ++   LL+LIQ
Sbjct: 2   YEQKVAIDIVKESFGDDVTKVFEFLVQRGKSSYKIINQSLSGKGGLTIKRIKQCLLVLIQ 61

Query: 66  HNCV---QAFTDVTEGEF-----GDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQD 125
           HN V   +    +T+ E      G+    D++Y A+  N +HR+RF KF+       G +
Sbjct: 62  HNLVTYEEFLLPLTKDEIEKLVPGEPLPSDSVYEAIIVNAIHRLRFPKFINYIKHSKGDE 121

Query: 126 KNCQELLEGLLQNGRLSMEQLVERAESSGRAGNHPISDVV----HDSLFKLLNAHFVERC 175
                +LE L+ +GRL M+ L+++A    R       D +     D+  KL+   F+ R 
Sbjct: 122 --AAYILEELIDHGRLPMDLLIKQASQIQRVDTFEDQDDITKRFEDTFTKLIMDQFIMRA 181

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match: Q9BUI4 (DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 8.5e-13
Identity = 87/331 (26.28%), Postives = 146/331 (44.11%), Query Frame = 0 

Query: 3   MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQH 62
           MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +L+QH
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLVQH 60

Query: 63  NCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 122
           N V          +    +    Y A  S +L  +R+ +++   ++ L  D   + ++E 
Sbjct: 61  NLV---------SYQVHKRGVVEYEAQCSRVLRMLRYPRYI-YTTKTLYSDTG-ELIVEE 120

Query: 123 LLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP 182
           LL NG+L+M  +V    +R   +   G       V ++  +L + HFV+RCP+   T + 
Sbjct: 121 LLLNGKLTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLADTHFVQRCPSVPTTENS 180

Query: 183 KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDT--NPEAEKSEHHSQI 242
               PPP    A    I+E    L  +L    +  +  R S  D    P+A++ ++ +  
Sbjct: 181 DPGPPPP----APTLVINEKDMYLVPKLSLIGKG-KRRRSSDEDAAGEPKAKRPKYTT-- 240

Query: 243 SGQKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFD---DGVVNVL 302
                  D+ E   D G     I W+AN D F +  R +A +  V ++ D     +V  +
Sbjct: 241 -------DNKEPIPDDG-----IYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTM 297

Query: 303 SAILEATRSSEKIVKTEITVPLSLDNIYEEV 325
             + E T SS        T PLS + I+  +
Sbjct: 301 LRMSEITTSS----SAPFTQPLSSNEIFRSL 297

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match: Q2TBL4 (DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.9e-12
Identity = 85/328 (25.91%), Postives = 140/328 (42.68%), Query Frame = 0 

Query: 3   MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQH 62
           MTQ  IK    ++  HFG +V K+   L+R G   LR++   T  +  QV  +L +LIQH
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTGTSLDQVKKALCVLIQH 60

Query: 63  NCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 122
           N V          +    +    Y A  + +L  +R+ +++  A  K       + ++E 
Sbjct: 61  NLV---------TYQVHKRGVVEYEAQCNRVLRMLRYPRYIYTA--KTLYSDTGELIVEE 120

Query: 123 LLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP 182
           LL NG+++M  +V    +R   +   G       V ++  +L++ HFV+RCP    T + 
Sbjct: 121 LLLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNTFVRLVDTHFVQRCPLVPATENS 180

Query: 183 KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISG 242
               PPP    A    +SE    L  +L    +  +  R S  D   E +          
Sbjct: 181 DTGPPPP----APTLVVSEKDMYLVPKLSLIGKG-KRRRSSDEDATGEPKAKR------- 240

Query: 243 QKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE 302
            K+  D+ E   D G     I W+AN D F +  R +A +  V ++ D     ++  +L 
Sbjct: 241 PKQTTDNKEPIPDDG-----IYWQANLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML- 297

Query: 303 ATRSSEKIVKT--EITVPLSLDNIYEEV 325
             R SE    +    T PLS + I+  +
Sbjct: 301 --RMSEVTTPSGAPFTQPLSSNEIFRSL 297

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match: Q9D483 (DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.4e-12
Identity = 82/335 (24.48%), Postives = 139/335 (41.49%), Query Frame = 0 

Query: 3   MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQH 62
           MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI H
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLVRTGSQPLRVIAHDTKASLDQVKKALCVLIHH 60

Query: 63  NCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 122
           N V          +    +    Y A  S +L  +R+ +++       G     + ++E 
Sbjct: 61  NLVL---------YHVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYGD--TGELIVEE 120

Query: 123 LLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP 182
           LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP    T S 
Sbjct: 121 LLLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPLVPDTDSS 180

Query: 183 KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISG 242
               PPP    A    I+E    L  +L    +         G     +++       + 
Sbjct: 181 DRGPPPP----APTLVINEKDMYLVPKLSLIGK---------GKRRRSSDEDATGEPKAK 240

Query: 243 QKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE 302
           + R  D+ E + D G     I W+ N D F +  R +A +  V ++ D     ++  +L 
Sbjct: 241 KPRYTDNKEPSPDDG-----IYWQVNLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTMLR 296

Query: 303 ATRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSM 334
                     +EIT P S     + +  NE+ RS+
Sbjct: 301 ---------MSEITTPSSAP-YTQPLSSNEIFRSL 296

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match: Q5XIL3 (DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Polr3c PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 8.0e-11
Identity = 81/328 (24.70%), Postives = 136/328 (41.46%), Query Frame = 0 

Query: 3   MTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILIQH 62
           MTQ  IK    ++  HFG +V K+   L+R G   LR++   T+ +  QV  +L +LI H
Sbjct: 1   MTQAEIKLCSLLLQEHFGEIVEKIGVHLIRTGSQPLRVIAHDTKASLDQVKKALCVLIHH 60

Query: 63  NCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELLEG 122
           N V          +    +    Y A  S +L  +R+ +++       G     + ++E 
Sbjct: 61  NLV---------IYHVHKRGVVEYEAQCSRVLRMLRYPRYIYTTKTLYGD--TGELIVEE 120

Query: 123 LLQNGRLSMEQLV----ERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSP 182
           LL NG+++M  +V    +R   +   G       V ++  +L + HFV+RCP    T S 
Sbjct: 121 LLLNGKMTMSAVVKKVADRLTETMEDGKTMDYAEVSNAFVRLADTHFVQRCPLVPDTDSS 180

Query: 183 KVEEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISG 242
               PPP    A    I+E    L  +L    +         G     +++       + 
Sbjct: 181 DPGPPPP----APNLVINEKDMYLVPKLSLIGK---------GKRRRSSDEDAAGEPKAK 240

Query: 243 QKRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILE 302
           + R  D+ E   D G     I W+ N D F +  R +A +  V ++ D     ++  +L 
Sbjct: 241 KPRCTDNEEPTPDDG-----IYWQVNLDRFHQHFRDQAIVSAVANRMDQTSSEIVRTML- 296

Query: 303 ATRSSEKIVKT--EITVPLSLDNIYEEV 325
             R SE    +    T PLS + I+  +
Sbjct: 301 --RMSEITTPSGAPFTQPLSSNEIFRSL 296

[Close]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match: XP_011651154.1 (DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus] >XP_031739155.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus] >KGN57381.1 hypothetical protein Csa_009994 [Cucumis sativus])

HSP 1 Score: 692 bits (1787), Expect = 4.76e-248
Identity = 353/357 (98.88%), Postives = 356/357 (99.72%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK 240
           EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK
Sbjct: 181 EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK 240

Query: 241 RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 300
           RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
Sbjct: 241 RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 300

Query: 301 RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISM 357
           RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++
Sbjct: 301 RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINL 357

[Close]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match: TYK22958.1 (DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 665 bits (1716), Expect = 2.27e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 181 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 241 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 360

Query: 361 TVD 362
            V+
Sbjct: 361 IVE 363

[Close]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match: XP_008439232.1 (PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo] >XP_008439233.1 PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo])

HSP 1 Score: 665 bits (1716), Expect = 3.14e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 181 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 241 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 360

Query: 361 TVD 362
            V+
Sbjct: 361 IVE 363

[Close]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match: KAA0033658.1 (DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 665 bits (1716), Expect = 6.22e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 29  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 88

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 89  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 148

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 149 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 208

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 209 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 268

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 269 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 328

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 329 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 388

Query: 361 TVD 362
            V+
Sbjct: 389 IVE 391

[Close]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match: XP_038878061.1 (DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida] >XP_038878062.1 DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida])

HSP 1 Score: 625 bits (1612), Expect = 2.07e-221
Identity = 317/358 (88.55%), Postives = 343/358 (95.81%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLLIRFTELT SQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLIRFTELTSSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFT VTEGEFGDA K DT YLALFSN+LHRMRFSKF+AIAS+KL +DK+C+ELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNVLHRMRFSKFLAIASEKLRKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERA+SS  AGN PI D+VHDSLFKLLNAHFVERCPAPEP+LSPKV
Sbjct: 121 EGLLQNGRLSMEQMVERAQSSKHAGNRPIPDIVHDSLFKLLNAHFVERCPAPEPSLSPKV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPP+KRGAKAAKISEVPETLEQR++E+ARP+EVLRFSMGDTN EAEKSEH+SQISGQ
Sbjct: 181 EEQPPPKKRGAKAAKISEVPETLEQRVVESARPMEVLRFSMGDTNTEAEKSEHYSQISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHDDLE+ QDSGDAD  ILWRAN+DEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA
Sbjct: 241 KRKHDDLEMVQDSGDADSVILWRANFDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISM 357
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL++LGCPG+DDY+I++
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSSLGCPGMDDYQINL 358

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match: A0A0A0LBF3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis sativus OX=3659 GN=Csa_3G182170 PE=3 SV=1)

HSP 1 Score: 692 bits (1787), Expect = 2.31e-248
Identity = 353/357 (98.88%), Postives = 356/357 (99.72%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK 240
           EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK
Sbjct: 181 EEPPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQK 240

Query: 241 RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 300
           RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT
Sbjct: 241 RKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEAT 300

Query: 301 RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISM 357
           RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++
Sbjct: 301 RSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINL 357

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match: A0A5D3DHJ0 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold386G00630 PE=3 SV=1)

HSP 1 Score: 665 bits (1716), Expect = 1.10e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 181 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 241 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 360

Query: 361 TVD 362
            V+
Sbjct: 361 IVE 363

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match: A0A1S3AYY3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC103484083 PE=3 SV=1)

HSP 1 Score: 665 bits (1716), Expect = 1.52e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 61  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 121 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 181 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 241 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 360

Query: 361 TVD 362
            V+
Sbjct: 361 IVE 363

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match: A0A5A7SSU3 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G001250 PE=3 SV=1)

HSP 1 Score: 665 bits (1716), Expect = 3.01e-237
Identity = 342/363 (94.21%), Postives = 351/363 (96.69%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI
Sbjct: 29  MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 88

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFTDVTEGEFGDA KDDT YLALFSNILHRMRFSKF+AIASQKLGQDKNCQELL
Sbjct: 89  QHNCVQAFTDVTEGEFGDAPKDDTQYLALFSNILHRMRFSKFLAIASQKLGQDKNCQELL 148

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ+VERAESSGRAGN PI DVVHDSLFKLLNAHFVERCPAPEPTLSPKV
Sbjct: 149 EGLLQNGRLSMEQMVERAESSGRAGNRPIPDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 208

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAKI EVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEH+SQISGQ
Sbjct: 209 EEQPPPRKRGAKAAKIFEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHYSQISGQ 268

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRKHD+LEIAQDSG ADG ILWRANYDEFIRCLRHKAC+EHVRSQFDDGVVNVLSA LEA
Sbjct: 269 KRKHDELEIAQDSGHADGAILWRANYDEFIRCLRHKACVEHVRSQFDDGVVNVLSAFLEA 328

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISMFT 360
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPG+DDYKI++  
Sbjct: 329 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGMDDYKINLRR 388

Query: 361 TVD 362
            V+
Sbjct: 389 IVE 391

[Close]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match: A0A6J1G256 (DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LOC111449973 PE=3 SV=1)

HSP 1 Score: 594 bits (1531), Expect = 2.06e-209
Identity = 300/358 (83.80%), Postives = 335/358 (93.58%), Query Frame = 0 

Query: 1   MVMTQYGIKYAVHIMTAHFGNLVAKVCETLLRKGPLTLRLLIRFTELTPSQVNNSLLILI 60
           M  TQYGIKYAVHI+TAHFGNLVAKVCETLLR+GPLTLRLL+RFTEL+ SQ+NNSLLILI
Sbjct: 1   MASTQYGIKYAVHIITAHFGNLVAKVCETLLRRGPLTLRLLVRFTELSSSQINNSLLILI 60

Query: 61  QHNCVQAFTDVTEGEFGDASKDDTLYLALFSNILHRMRFSKFVAIASQKLGQDKNCQELL 120
           QHNCVQAFT VTEGEFGDA K DT YLALFSNILHRMRFSKF+AIAS+KL +DK+C+ELL
Sbjct: 61  QHNCVQAFTAVTEGEFGDAPKADTQYLALFSNILHRMRFSKFLAIASEKLEKDKDCEELL 120

Query: 121 EGLLQNGRLSMEQLVERAESSGRAGNHPISDVVHDSLFKLLNAHFVERCPAPEPTLSPKV 180
           EGLLQNGRLSMEQ++ERA+SS  AGN PI DVV++SL KLLNAHFVERCPAPEPTLSP+V
Sbjct: 121 EGLLQNGRLSMEQIIERAKSSKHAGNRPIPDVVNESLLKLLNAHFVERCPAPEPTLSPQV 180

Query: 181 EE-PPPRKRGAKAAKISEVPETLEQRLIEAARPVEVLRFSMGDTNPEAEKSEHHSQISGQ 240
           EE PPPRKRGAKAAK+SEVP TLEQRL+E+ARP+EV+RFS+G+TN EAE+SEH+S ISGQ
Sbjct: 181 EEQPPPRKRGAKAAKVSEVPPTLEQRLVESARPMEVIRFSIGETNTEAEESEHYSSISGQ 240

Query: 241 KRKHDDLEIAQDSGDADGPILWRANYDEFIRCLRHKACIEHVRSQFDDGVVNVLSAILEA 300
           KRK  DL++ Q+SGDADG ILWRAN+DEF+RCLRHKACIEHVRSQFDDG VNVLSAILEA
Sbjct: 241 KRKRGDLDMIQESGDADGIILWRANFDEFVRCLRHKACIEHVRSQFDDGAVNVLSAILEA 300

Query: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLAALGCPGIDDYKISM 357
           TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASL+ALGC G++DYKI++
Sbjct: 301 TRSSEKIVKTEITVPLSLDNIYEEVMKNEVGRSMTLDRVEASLSALGCSGMEDYKINL 358

The following BLAST results are available for this feature:
BLAST of Cucsat.G15514.T3 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q55FJ53.8e-1329.73DNA-directed RNA polymerase III subunit rpc3 OS=Dictyostelium discoideum OX=4468... [more]
Q9BUI48.5e-1326.28DNA-directed RNA polymerase III subunit RPC3 OS=Homo sapiens OX=9606 GN=POLR3C P... [more]
Q2TBL41.9e-1225.91DNA-directed RNA polymerase III subunit RPC3 OS=Bos taurus OX=9913 GN=POLR3C PE=... [more]
Q9D4839.4e-1224.48DNA-directed RNA polymerase III subunit RPC3 OS=Mus musculus OX=10090 GN=Polr3c ... [more]
Q5XIL38.0e-1124.70DNA-directed RNA polymerase III subunit RPC3 OS=Rattus norvegicus OX=10116 GN=Po... [more]
BLAST of Cucsat.G15514.T3 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651154.14.76e-24898.88DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis sativus] >XP_03... [more]
TYK22958.12.27e-23794.21DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuw... [more]
XP_008439232.13.14e-23794.21PREDICTED: DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo... [more]
KAA0033658.16.22e-23794.21DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Cucumis melo var. makuw... [more]
XP_038878061.12.07e-22188.55DNA-directed RNA polymerase III subunit RPC3 isoform X1 [Benincasa hispida] >XP_... [more]
BLAST of Cucsat.G15514.T3 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBF32.31e-24898.88DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis sativus OX=3659 GN=Csa_3... [more]
A0A5D3DHJ01.10e-23794.21DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3AYY31.52e-23794.21DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A5A7SSU33.01e-23794.21DNA-directed RNA polymerase III subunit RPC3 OS=Cucumis melo var. makuwa OX=1194... [more]
A0A6J1G2562.06e-20983.80DNA-directed RNA polymerase III subunit RPC3 OS=Cucurbita moschata OX=3662 GN=LO... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008806RNA polymerase III Rpc82, C -terminalPFAMPF05645RNA_pol_Rpc82coord: 156..336
e-value: 4.1E-17
score: 62.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 91..176
e-value: 1.1E-19
score: 72.1
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 3..76
e-value: 1.9E-23
score: 84.4
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 264..351
e-value: 6.4E-8
score: 35.2
IPR013197RNA polymerase III subunit RPC82-related, helix-turn-helixPFAMPF08221HTH_9coord: 10..69
e-value: 4.4E-22
score: 77.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..194
IPR039748DNA-directed RNA polymerase III subunit RPC3PANTHERPTHR12949RNA POLYMERASE III DNA DIRECTED -RELATEDcoord: 3..348

Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cucsat.G15514Cucsat.G15514gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15514.T3.E1Cucsat.G15514.T3.E1exon
Cucsat.G15514.T3.E2Cucsat.G15514.T3.E2exon
Cucsat.G15514.T3.E3Cucsat.G15514.T3.E3exon
Cucsat.G15514.T3.E4Cucsat.G15514.T3.E4exon
Cucsat.G15514.T3.E5Cucsat.G15514.T3.E5exon
Cucsat.G15514.T3.E6Cucsat.G15514.T3.E6exon
Cucsat.G15514.T3.E7Cucsat.G15514.T3.E7exon
Cucsat.G15514.T3.E8Cucsat.G15514.T3.E8exon
Cucsat.G15514.T3.E9Cucsat.G15514.T3.E9exon
Cucsat.G15514.T3.E10Cucsat.G15514.T3.E10exon
Cucsat.G15514.T3.E11Cucsat.G15514.T3.E11exon
Cucsat.G15514.T3.E12Cucsat.G15514.T3.E12exon
Cucsat.G15514.T3.E13Cucsat.G15514.T3.E13exon
Cucsat.G15514.T3.E14Cucsat.G15514.T3.E14exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cucsat.G15514.T3.C1Cucsat.G15514.T3.C1CDS
Cucsat.G15514.T3.C2Cucsat.G15514.T3.C2CDS
Cucsat.G15514.T3.C3Cucsat.G15514.T3.C3CDS
Cucsat.G15514.T3.C4Cucsat.G15514.T3.C4CDS
Cucsat.G15514.T3.C5Cucsat.G15514.T3.C5CDS
Cucsat.G15514.T3.C6Cucsat.G15514.T3.C6CDS
Cucsat.G15514.T3.C7Cucsat.G15514.T3.C7CDS
Cucsat.G15514.T3.C8Cucsat.G15514.T3.C8CDS
Cucsat.G15514.T3.C9Cucsat.G15514.T3.C9CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cucsat.G15514.T3Cucsat.G15514.T3-proteinpolypeptide


GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005666 RNA polymerase III complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity